[+] Show/hide bicluster #3 rows and columns.
bicluster 3
Mycoplasma pneumoniae
8x115
[+] Show/hide bicluster #3 rows (genes).
bicluster 3 genes
Mycoplasma pneumoniae
8
[+] Show/hide bicluster #3 rows (short gene names).
bicluster 3 short names
Mycoplasma pneumoniae
8
short_name
[+] Show/hide bicluster #3 rows (long gene names).
bicluster 3 long names
Mycoplasma pneumoniae
8
long_name
[+] Show/hide bicluster #3 rows (NCBI RefSeq gene IDs).
bicluster 3 NCBI RefSeq IDs
Mycoplasma pneumoniae
16
[+] Show/hide bicluster #3 gene upstream sequences.
bicluster 3 upstream sequences
Mycoplasma pneumoniae
8
upstream
[+] Show/hide bicluster #3 columns (arrays; conditions).
bicluster 3 arrays
Mycoplasma pneumoniae
115
[+] Show/hide bicluster #3 ratios.
bicluster 3 ratios
Mycoplasma pneumoniae
8x115
GENES GSM351800 GSM351802 GSM351805 GSM351806 GSM351808 GSM351809 GSM351811 GSM351815 GSM351817 GSM351818 GSM351819 GSM351821 GSM351822 GSM351824 GSM351825 GSM351827 GSM351828 GSM351832 GSM351833 GSM351835 GSM351838 GSM351841 GSM351848 GSM351849 GSM351852 GSM351854 GSM351855 GSM351856 GSM351858 GSM351859 GSM351860 GSM351861 GSM351862 GSM351864 GSM351865 GSM351866 GSM351868 GSM351869 GSM351870 GSM351871 GSM351873 GSM351874 GSM351875 GSM351876 GSM351879 GSM351888 GSM351890 GSM351894 GSM351895 GSM351896 GSM351898 GSM351903 GSM351906 GSM351908 GSM351909 GSM351911 GSM351915 GSM351917 GSM351919 GSM351920 GSM351924 GSM351925 GSM351926 GSM351930 GSM351938 GSM351940 GSM351944 GSM351945 GSM351947 GSM351948 GSM351952 GSM351955 GSM351956 GSM351957 GSM351958 GSM351959 GSM351961 GSM351964 GSM351965 GSM351966 GSM351967 GSM351971 GSM351972 GSM351977 GSM351979 GSM351980 GSM351981 GSM351982 GSM351985 GSM351986 GSM351990 GSM351991 GSM351999 GSM352001 GSM352004 GSM352007 GSM352008 GSM352009 GSM352011 GSM352012 GSM352013 GSM352015 GSM352016 GSM352019 GSM352021 GSM352025 GSM352026 GSM352027 GSM352028 GSM352031 GSM352035 GSM352037 GSM352043 GSM352044 GSM352049
MPN040 0.434115169467334 1.74519551370471 1.69699770781335 1.66059852501836 3.00729854625559 -0.545442608889146 NA 0.081351488317351 0.475596439722573 2.76054869849887 -0.197413515160224 1.94735746103434 3.42135915792028 2.38598584937507 -0.198224961345240 3.05633173371143 0.839162750048407 1.77547916966862 0.434115169467334 3.13889639439069 NA 0.682830397855342 -0.725968703872849 1.72382236082965 1.59304770962283 0.475596439722573 1.40928205112738 NA 2.32946932355988 0.869163844585306 1.60446365730729 2.45628974485655 0.516070864541443 3.76115676586717 1.15786477433292 -0.247564505168762 0.0484686417283366 0.0475825764371639 0.435082662700019 1.72382236082965 1.70223453225802 1.32378425317411 NA NA 1.42532215733408 0.823911020337064 -0.0231355198180747 1.38194670681268 0.334522769309789 -0.409362139368374 1.41729322479675 -0.409362139368374 -0.103767272665645 -0.105449604875737 -0.544850347813053 -0.410012285676148 NA 0.257025466787736 -0.104609664989885 -0.544850347813053 -0.0223108192865529 0.231047150958106 0.0502485432564814 0.285865311485228 -0.722787627173828 1.2821239800697 -0.725968703872849 -0.725968703872849 -0.725968703872849 -0.725968703872849 -0.0231355198180747 NA -0.7254423882362 NA -0.725968703872849 -0.725968703872849 -0.725968703872849 -0.725968703872849 -0.725968703872849 -0.545442608889146 NA NA -0.545442608889146 0.180838066107770 -0.545442608889146 -0.298512152669741 -0.725968703872849 -0.410012285676148 NA NA 0.975680872920417 -0.54425635815218 -0.545442608889146 -0.545442608889146 -0.725968703872849 NA -0.54425635815218 -0.297781196770306 0.667708719344747 2.88221619249958 -0.298512152669741 1.00475600288005 3.03802093785766 1.94579690811101 0.941403861920297 NA 2.63592835339248 0.871244628862239 1.15896129586898 -0.635705656031647 0.382862937502872 -0.298512152669741 1.88880999552974 1.07095407841353 NA
MPN098 1.38374002719462 2.17188412086722 1.52471954570074 1.53754973673135 1.92868118052467 -0.211071928494554 -0.487598303942515 0.683303758904931 1.09366532387738 2.35110080087354 0.635939032757084 1.87390266602442 1.54054673125681 2.21790549033694 0.0154066386346283 3.03771875379061 1.26273445089595 2.71372535664233 0.804279671392612 2.76880216888894 -0.487598303942515 0 -0.0296571592907041 1.44779803320759 2.81715700042376 0.832650486755658 1.8121023178873 2.30625461767073 2.45528635937042 1.48634044291245 1.31775215831510 1.6828519633071 1.61758999035907 3.6972113871768 2.68846390678250 0.980689842529132 0.976630639007767 0.692869537713607 0.72255442579017 2.49140337322872 1.64466059009678 1.38739112376354 0.122691972244054 0.404681119386783 1.96706678233845 1.14958128836748 -0.517600181129302 1.32595771745772 0.841346312892605 0.0166782554797861 1.97030420647497 -0.676348258864353 -0.428978978598027 -0.751860712942935 -0.750884126434772 -0.487598303942515 -0.269585091158216 -0.458959300963603 -0.189759916047945 -0.356878602752716 -0.51650681815584 -0.311052122234781 -0.0434007588800466 -0.428978978598027 -0.603007730602814 -0.40365565395404 -0.250024413048305 -0.240952607658065 -0.638881659577752 -0.211071928494554 0 -0.695001099739282 -0.249072270385275 -0.751860712942935 -0.405593134931961 -0.250024413048305 -0.171744173247108 0.0325111292354204 -0.211071928494554 -0.458959300963603 -0.750884126434772 -0.269585091158216 -0.0296571592907041 0.370428978140084 -0.431061025456434 -0.171744173247108 -0.290298719912234 0.311536424910434 -0.356878602752716 -0.393167972637156 2.22857029109969 -0.169596115661835 -0.577517786343518 -0.517600181129302 -0.487598303942515 -0.992534868367142 -1.31386059342001 -1.20537113874555 1.20367027722728 2.48508936214031 -0.0820242606740742 1.21832401358316 4.67542254944723 2.29089201564979 1.83391812351178 1.22733689749487 2.74391849816986 -0.151216602016505 0.480043306967258 -0.714641896216767 -0.231880802267824 0.152002310604573 1.18898766962450 0.730603963762012 -0.208827869849637
MPN102 2.06217337072909 2.40044890413516 1.66171198701923 1.81414149323614 2.60435267833342 -0.00138981922781781 -0.0205306634656386 1.52791371502749 1.28483141677880 2.92275738874598 0.795332043250002 1.87146306329157 2.13044333766353 3.07521103461871 0.642625616743878 3.67458090481815 1.52227136048191 2.10468082211792 1.33210605847140 2.92884346172238 -0.131582032739909 0.403205603538079 -0.396389624024413 1.49700886537284 3.01556459331382 0.673469755199605 1.81414149323614 2.3535759607075 2.31945178421283 1.76215861018 1.99926436889070 1.74919790665075 1.69571264033345 3.6554981899703 2.90676959481631 0.842067927054797 1.40302033877060 1.36082908676049 1.30412287062286 2.89390051519907 0.98526802207668 1.17893671116913 -0.274921263664589 -0.178258030699295 1.84723684400918 1.03105145631052 -0.274921263664589 1.29969182552611 1.01288794218321 -0.13067159301793 1.85185993790657 -0.274168006715804 -0.107387599239868 -0.131582032739909 -0.274168006715804 -0.274921263664589 -0.334061205507872 -0.274921263664589 -0.460891921813374 0.0861540827775702 -0.177373500629536 -0.274168006715804 -0.200377635086108 -0.460128610382307 -0.328850637876413 -0.536065382170916 0.0359626856186133 0.218423219737427 -0.0396715083482663 0.218423219737427 0.161948938898544 -0.227076250465438 -0.0387786409184149 -0.334061205507872 -0.274921263664589 0.101626235810669 0.0359626856186133 0.0688166624017248 0.0172864328729937 -0.178258030699295 -0.428212660117524 -0.227945417353331 0.101626235810669 0.762677439635146 -0.154920031719602 -0.178258030699295 -0.0869704941006342 -0.0205306634656386 -0.227076250465438 -0.536842798119743 1.71760451421077 -0.332334491806812 -0.715788975692605 -0.537617950794485 -0.537617950794485 NA NA NA 0.947711979895601 3.35755256166077 -0.227945417353331 0.461679392244483 3.93911829922053 0.938568484132386 0.970102837359113 0.91627651304698 2.27056776571714 -0.332334491806812 0.000464173656985554 -1.02697368121654 -0.537617950794485 -0.461653010593224 1.64130932621128 0.767271910530644 -0.129758495399718
MPN103 1.97432566603171 1.97432566603171 1.36543771863583 1.14066661055984 1.80202438884618 -0.0445118843740921 -0.173523239836665 0.565879326379718 0.681575378100858 2.25638362863071 1.62838061339696 1.77867576072798 2.23665288340677 2.81272803381848 0.183283476043562 2.50129241188167 1.26278944169664 1.46294434379682 1.08799474506494 1.08040843214587 -0.71413426887586 0.327135332142255 -0.387397684242135 1.54654795028675 2.12445719047675 0.423232992220989 2.20283652886670 2.59723871226412 1.04289145034089 1.38381199587457 1.79020789212506 3.27547505341527 1.2273349717884 2.73590656780516 1.81374431132575 0.786869178282317 0.083832563522327 -0.150787859125942 0.83484469059212 2.08123043285497 2.45151113751393 2.02983889168870 -0.619966885719838 -0.57761813636654 1.03660862148814 0.93290156074326 -0.00122683677041358 0.862720251993964 0.480707601831185 -0.172727833137778 0.81197892837088 -0.534584080531944 -0.618730426104373 -0.71413426887586 NA -0.535269387013242 -0.173523239836665 -0.327672750409556 NA -0.61934955727012 -0.98053060873501 -0.61934955727012 0.0363548569341646 -0.980084812108399 -0.82548868586803 0.387868128806065 -0.535269387013242 -0.71413426887586 -0.71413426887586 -0.456916004783661 0.159254883502397 -0.215823237375614 -0.215823237375614 -0.387397684242135 -0.456916004783661 -0.0445118843740921 -0.173523239836665 -0.456916004783661 -0.327672750409556 -0.619966885719838 -0.61934955727012 -0.71413426887586 -0.535269387013242 0.879678162098117 -0.00122683677041358 -0.980975108350222 -0.667050577592892 -0.619966885719838 NA -0.456206633961166 1.22544505859220 -0.386002649345572 -0.71413426887586 -0.980975108350222 NA NA NA NA 2.04210171021393 1.40179396788046 -0.387397684242135 0.386256106498473 2.50378934175588 NA NA NA 1.59266640957956 0.752060064189823 1.28279341199065 NA NA -0.980975108350222 0.931874608004914 -0.456916004783661 -0.386002649345572
MPN131 1.84688289866267 2.50224577146678 1.88779075249440 1.85318545302883 2.64870989087343 -0.261812900484127 -0.45894052268254 1.63758990122250 1.75361588331566 2.96124615499515 0.39620198502177 1.50456083737887 1.67766076280670 3.16428257424075 0.642241204450204 3.88231415948718 1.86634459789539 2.07934392505162 1.38983302880412 2.49583823286334 -0.784180153740535 0.85720673106401 -0.372037616327241 1.96221722240082 2.96590162114587 1.43109599782327 2.38045433792575 NA 2.15417257667140 2.26672980783426 2.55732492266662 2.03962992086568 1.37991430576867 3.39301508488622 2.28880525003315 0.367318247951315 0.498496784795954 0.352181702297946 0.660619845425714 2.49100194460063 2.42367360093255 2.02441557456891 -0.372037616327241 -0.372037616327241 1.58576851607966 1.00746310482074 0.0853659524361453 1.50599452178365 1.21894902800988 -0.16455412277667 1.26351858033095 -0.0568402711065542 -0.0306657235842271 -0.105402577316773 0.277798190781691 -0.00729016800483261 -0.294933808832419 0.133374045149557 -0.227862013235891 0.192153055931607 0.173169176672236 0.421009525990418 -0.103102221559718 0.245336051486763 -0.223675555215299 1.31387731665031 -0.372037616327241 -0.372037616327241 -0.505910153023836 -0.45894052268254 -0.228691992790309 -0.414665645493226 -0.227862013235891 -0.784180153740535 -0.294933808832419 -0.0577224685548434 -0.294933808832419 -0.00729016800483261 -0.45894052268254 0.21014214785849 -0.371250842554313 -0.552879783365132 -0.294933808832419 0.652820502888337 0.0163977145351547 -0.657322234313238 -0.45894052268254 -0.45894052268254 -0.720103960084688 -0.104638027530788 0.944562688154807 -0.457418136054412 -0.261812900484127 -0.552879783365132 -0.784180153740535 -0.656102468790464 -0.457418136054412 -0.294161309800463 0.676022691473556 3.84315020895881 0.133374045149557 0.762359959827055 3.71289028844449 1.48396771161343 1.28986099333571 1.76809980019441 2.49377397285307 0.678036776204528 0.625524957228268 -0.228691992790309 -0.294933808832419 -0.165429145876670 0.870730301670701 -0.00729016800483261 -0.457418136054412
MPN371 1.64598169628510 2.40074839150385 1.41266087285783 1.64598169628510 2.78018378532127 -0.167798781287332 -0.0941665341192506 0.94352703155138 1.25097999821832 2.32538014537108 0.776759473071808 1.30287526400397 1.83945915518618 2.91330625993266 0.846467555719967 3.13572722521208 1.42914136121384 1.99912047454468 1.72258241595107 3.03145807350226 0.0829779637891148 0.334460926571626 0.297243547345082 1.57081770019711 2.59574743575779 0.87581331615462 1.87094420579599 2.33831394030848 2.28396471068792 1.97227458866810 2.25217174898971 2.17232508342548 0.94352703155138 3.15742053465629 2.30406161831138 0.460051788167451 0.383712659034503 0.441705401026246 1.01376140536875 1.92077839615143 2.25217174898971 2.22225696065346 -0.0818397972020894 -0.0703939936097869 1.45745180935412 1.02432629534620 -0.0169772539347645 1.07653394435287 0.662523004813487 -0.0922498963388383 1.34928380077334 -0.76194056073309 -0.691535717783942 -0.463046755672312 -0.839961423103571 -0.661108276923652 -0.548242620620643 -0.628160635050841 -0.594459510875221 -0.74512213954977 -0.506503162937863 -0.718487476302854 -0.317616514005996 -0.305772095232471 -0.467969429825645 0.254071009037344 0.0310167184152676 -0.0703939936097869 -0.405616091425911 -0.357171593853162 -0.39900405354372 -0.5646394828153 -0.610697799946803 -0.515655193398209 -0.448773108442979 -0.552018406848687 -0.515655193398209 -0.420015056238954 -0.552018406848687 -0.100949054726325 -0.297423503107114 -0.391703019064324 -0.391703019064324 0.844394851385641 -0.295835153164043 -0.814684875169193 -0.0107389626422254 -0.270949736725133 -0.594459510875221 -0.696889644851095 1.82864954848065 -0.360726004758985 -0.193026225477417 -0.23222498577938 -0.402310072824643 -0.346830242541115 -0.336764163905213 -0.382924460612844 0.922191608258105 3.09186679134891 -0.18623203926483 0.404853301242219 3.29318955346393 2.57605484154654 1.60015169579656 2.11510180175566 3.35103796179316 0.659933572061611 0.820886637701892 -0.107251688317176 -0.336749299841326 -0.391703019064324 2.23204779108081 0.90637222072252 -0.674874259620025
MPN486 1.58716129364731 2.04803432110392 1.39046660753023 1.68689287771817 2.66929919072599 -0.0307259456053722 -0.834212278091796 0.97589876239266 0.783906985401298 1.94141683510938 0.935814690451074 1.16272188100321 1.59864977754900 2.76974111997485 0.491978132079775 3.03041573949777 1.40079312654569 2.02239055192193 1.73570017798414 2.71958475502022 -0.72456401868351 0.272868420417362 -0.564382509179961 1.25334594224228 2.46353391008848 0.643102962976518 1.55744367989565 1.49098045997217 2.18216318933974 1.43777101741489 1.96796479969222 2.0727639692308 0.869974059752638 2.76946397717311 2.12909585191134 0.455292651960998 0.203716422692441 0.116359707837341 0.819473654549701 1.94141683510938 1.5799205312928 1.79927530565213 -0.706797214591463 -0.787065631970165 1.71736612884714 1.12395707678984 0.328629169245021 1.27717333571418 0.897255946722416 -0.0948703010104351 1.70758037996193 -0.940454282194227 -0.56302976639012 -0.706797214591463 -0.833593735704766 -0.229380098298410 -0.507171069157543 -0.244101480466895 -0.741761041933234 -0.940454282194227 -0.833593735704766 -0.456750393052903 0.0991399428895238 -0.0525491343827591 -0.428058671027445 0.514986421053422 -0.600160547452939 -0.535425361014537 -0.669212535065786 -0.706797214591463 -0.633905739056175 -0.650864324190615 -0.506518989277249 -0.742330822775557 -0.35075217716412 -0.787065631970165 -0.482319567162982 -0.633905739056175 -0.787065631970165 -0.787065631970165 -0.786413520874054 -0.941040625466143 -0.941040625466143 0.666411136449994 -0.457501652899641 -0.390759963989957 -0.411872175956799 -0.431733443326885 -0.741761041933234 -0.633217061557069 1.38748037567295 -0.0941077200648589 -0.198979949735109 -0.198979949735109 -0.617033143254557 -0.480942807216279 -0.242769034298741 -0.633217061557069 1.15483569798009 3.03156015524195 0.116359707837341 1.05566083776065 3.17923010341859 2.45316345968822 1.48896657642344 1.68857321050857 2.933000476344 0.68714021474761 1.08967523700742 -0.787065631970165 -0.213537567387514 -0.742330822775557 1.82880684874781 0.658733496544524 -0.832973387677828
MPN578 1.20483670441864 2.40925764233901 1.86562344075267 1.27105463778243 1.87390637326603 -0.250044023318312 -0.290622531095853 0.834832261340512 1.22082231315173 2.24488053164171 0.485958616091842 1.66569487742214 1.81333362855122 2.40273336209359 0.452194373979413 4.19829057675234 1.70839000910543 2.13555860151378 1.86047043053101 1.70390061021942 -0.290622531095853 1.54301418545063 0 2.00040805779823 2.26682455891766 0.760654181659393 2.63700236412572 3.00572080380328 1.25512026567895 1.77349127597315 2.16480362680024 1.41372402759612 0.452194373979413 2.34117347093065 1.33914612996934 0.0628877232309343 0.0919515436125617 0.585324494271804 0.538529911827458 1.80776247277873 3.42017762200373 3.33120616687768 -0.209465516342609 -0.290622531095853 1.62653923391759 1.17179947334811 -0.49155747054715 0.880086345104712 0.519553214997771 -0.490626244262846 0.282879875246516 -0.60580951203322 -0.489692298946773 -0.49155747054715 -0.733861265178957 -0.606648366610135 -0.549102918578642 -0.131958224014776 -0.13088617818513 -0.889349310161796 -0.60580951203322 -0.208448656193426 -0.287774916627512 0.177882582386231 -0.665554609457176 1.40942814182423 -0.131958224014776 -0.290622531095853 -0.337854892889879 -0.0584158998263009 -0.890028996740416 -0.889349310161796 -0.548180178143117 0 0.061787783070068 -0.49155747054715 -0.812318189174526 -0.734607381608637 -0.606648366610135 -0.49155747054715 -0.490626244262846 0.119830812311560 0.119830812311560 1.59441781620637 -0.606648366610135 -0.385087254683905 -0.385087254683905 -0.290622531095853 0.148741311695676 -0.384123328654819 0.505389994208883 -0.383156588175272 -0.385087254683905 -0.290622531095853 -0.49155747054715 -0.489692298946773 -0.604968207842016 -0.384123328654819 1.19700792558340 3.8079300105273 -0.49155747054715 1.22082231315173 3.17345406568793 NA 0.993067679046907 1.51385937813539 2.85705921322101 0.122098436696404 0.587728357302995 -0.0584158998263009 -0.0584158998263009 -0.385087254683905 1.54959723398752 0.519553214997771 -0.888667639836612
[+] Show/hide bicluster #3 motif PSSM #1. bicluster 3 motif PSSM #1 Mycoplasma pneumoniae 24x4
POSITION A C G T
1 0 0.571429 0.285714 0.142857
2 0 0.857143 0 0.142857
3 0.571429 0.285714 0.142857 0
4 0.142857 0.714286 0 0.142857
5 0 0.857143 0 0.142857
6 0.285714 0 0.571429 0.142857
7 0.285714 0.142857 0.428571 0.142857
8 0.142857 0.142857 0.714286 0
9 0 0 0.285714 0.714286
10 0.285714 0 0 0.714286
11 0 0.571429 0 0.428571
12 0.714286 0 0.142857 0.142857
13 1 0 0 0
14 0 0.571429 0.142857 0.285714
15 0 0.714286 0.285714 0
16 0.428571 0.142857 0 0.428571
17 0.142857 0.428571 0 0.428571
18 0.142857 0 0.857143 0
19 0.285714 0.428571 0.285714 0
20 0.285714 0.142857 0.428571 0.142857
21 0.142857 0.428571 0.428571 0
22 0 0.285714 0.428571 0.285714
23 0 0.142857 0.714286 0.142857
24 0 0 1 0 [+] Show/hide bicluster #3 motif PSSM #2. bicluster 3 motif PSSM #2 Mycoplasma pneumoniae 6x4
POSITION A C G T
1 0 0.75 0.25 0
2 0 1 0 0
3 0 0 0 1
4 0 0.25 0 0.75
5 0 0 1 0
6 1 0 0 0 |