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bicluster 46
Methanococcus maripaludis S2
16x57
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bicluster 46 genes
Methanococcus maripaludis S2
16
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bicluster 46 short names
Methanococcus maripaludis S2
16
short_name
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bicluster 46 long names
Methanococcus maripaludis S2
16
long_name
[+] Show/hide bicluster #46 rows (NCBI RefSeq gene IDs).
bicluster 46 NCBI RefSeq IDs
Methanococcus maripaludis S2
32
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bicluster 46 upstream sequences
Methanococcus maripaludis S2
16
upstream
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bicluster 46 arrays
Methanococcus maripaludis S2
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bicluster 46 ratios
Methanococcus maripaludis S2
16x57
GENES H_vs_Leu_3000070032B.4 H_vs_Leu_3000070258A.2 H_vs_Leu_3000070258B.2 H_vs_Leu_3000070260A.1 H_vs_Leu_3000070260B.1 H_vs_Leu_3000070261A.1 H_vs_PO4_3000070247B.3 H_vs_PO4_3000070249A.2 H_vs_PO4_3000070249B.2 H_vs_PO4_3000070253A.1 H_vs_PO4_3000070254B.1 S2_vs_S40_BR1_3000069792A S2_vs_S40_BR1_3000069792B S2_vs_S40_BR1_3000069793A S2_vs_S40_BR1_3000069793B S2_vs_S40_BR2_3000070263A S2_vs_S40_BR2_3000070263B S2_vs_S40_BR4_3000070272A S2_vs_S40_BR4_3000070272B S2_vs_S40_BR4_3000070273A S2_vs_S40_BR4_3000070273B leu_vs_PO4_BR1_3000070030A leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR3_3000070251A leu_vs_PO4_BR3_3000070251B leu_vs_PO4_BR3_3000070252A leu_vs_PO4_BR3_3000070252B leu_vs_PO4_BR4_3000070256A leu_vs_PO4_BR4_3000070256B leu_vs_PO4_BR4_3000070257A leu_vs_PO4_BR4_3000070257B mma_0070m_0.2 mma_0334m_0.402 mma_0649m_0.885 mma_0783m_1.23 mma_0849m_1.4 mma_1444m_1.58 rapid_PO4_vs_slow_PO4_3000069786Alow.2 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069787A.2 rapid_PO4_vs_slow_PO4_3000069787Alow.2 rapid_PO4_vs_slow_PO4_3000069787B.2 rapid_PO4_vs_slow_PO4_3000069789A.3 rapid_PO4_vs_slow_PO4_3000069789B.3 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Alow.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023A.1 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023B.1 rapid_PO4_vs_slow_PO4_3000070023Blow.1 rapid_PO4_vs_slow_PO4_3000070024A.1 rapid_PO4_vs_slow_PO4_3000070024Alow.1 rapid_PO4_vs_slow_PO4_3000070024B.1
MMP0039 -1.82707079126039 -0.70839012345868 -0.743881259606819 -1.51214987401925 -1.14489377556336 1.47847513502523 0.729695695184815 0.216698377277259 0.340622479831853 -0.53175410649272 -0.70658020339819 -0.814248552569131 -0.823308434345496 0.330679170172583 0.194461058425843 0.353032015034756 0.451766792111961 -0.303689507910412 -0.182813014431345 0.417121032812973 0.202880404790597 1.59902091791138 1.52908294419595 -1.43916075796645 -1.44148046086901 0.506707234574489 0.637871964072845 -0.54499432139707 -0.54718742949896 0.847826790616043 0.785955628960811 -1.38942674192172 -1.16509363905116 -0.200662934974924 0.240795521969910 0.115171814765241 -0.115171814765240 -0.184315103210690 0.312082788351652 1.27719963100782 0.575397721906805 1.25060416172303 -0.0902346150215082 0.158956120231403 -0.0536788279874668 -0.519271795016676 -0.510701751368915 1.77794235552805 2.14521125971764 2.52261176479931 -0.462920754429737 -0.106528433081437 0.00405726178089174 -0.25990283799741 0.0240712874815226 0.280349157255418 0.213417079059382
MMP0218 -0.933427501469081 -1.75369588725379 -1.77441850187707 -0.242147616734487 -0.367889260769313 -0.114688669446270 -1.11452335445723 0.548730889778982 0.108963080684311 0.330284925051743 -1.13765053960677 -0.678702309118793 -0.450339460970532 0.531793842115259 0.845834605564338 0.232647032204160 0.0733245074882328 -0.03509876065589 -0.276832740191216 0.190961938004288 0.415371131219626 0.885123493058834 0.862594379348532 -1.64001658947233 -1.72270881088530 1.05480868686848 0.883599939518732 -1.29279658256705 -1.31714802990567 0.430122652704048 0.372053415135788 -0.483821942242777 -0.372053415135788 0.0503410233086561 0.412877353144343 0.213768630281961 -0.0503410233086561 -0.103486802080230 -1.92576823284308 -0.0921632863294484 -0.225872322044624 0.347369053183124 0.318660611050939 0.624348681092184 0.383212113010516 -0.866959666723103 -1.18861110559315 1.43352915944188 1.62238741770151 1.80642369970804 -0.643233933496056 -0.663943555347555 -0.838637085592001 -1.09597178986516 0.393449194283407 0.454892960881549 -0.0179167993527079
MMP0226 -1.17869141012724 -0.888560635113414 -1.11134936944627 -0.541358412859982 -0.488096501367215 0.761426827751687 -0.104934719595697 0.513707953802667 0.66042430488747 0.786131225255148 -0.79721301039171 -0.668943030755449 -0.711540037323987 1.41942031732853 1.81203020174406 0.150527156208116 -0.150527156208116 -0.915011702560618 -0.476951633736068 0.791438097544486 0.946682162957364 1.81269977041826 1.20624040361477 -1.07892999575814 -1.05837940454679 1.28412255914314 1.21138603470197 -0.70976077416396 -0.731819592839371 0.67601294148262 1.13101295358962 -0.586148648869037 -0.66694622941671 -0.137011681098966 -0.2316433515226 0.137011681098966 -0.559279980237519 -1.48891700155746 0.721140984864993 0.520220963047552 0.595260034923043 0.36442158376677 -0.488911599680871 -1.18554050726848 -0.0136195564991490 -1.1379460703361 -0.181580422483872 1.79573366137429 2.08497286403975 2.28485050421275 -2.02469977750426 -1.81938067827492 -1.10744110345076 -1.35324411199603 0.739739141881651 0.777434988258553 1.59302973383529
MMP0227 -1.64483890138841 -0.927304689246853 -1.02895711736453 -1.60626533855505 -0.737862221836042 0.428197504188643 0.302842588574177 -0.040924158127507 0.279814382206022 0.739561172575267 -1.45175692649131 -1.28514189699053 -1.51832246130828 0.640981022843487 0.96137895230621 0.536763445978881 0.425497382553911 -0.741197498058286 -0.425497382553911 0.525604305955589 0.526174694574689 1.7076940384683 1.74440796030368 -1.31433090236164 -1.36943707276881 0.624233192598448 0.449598425636936 -0.903312925019176 -0.672084888320643 0.936741582010447 1.11272201336575 -0.384393928354945 -0.373098705420111 0.46406518203604 0.195895708129678 -0.00125553535202259 0.00125553535202259 -0.00476459569485491 -2.47362999598357 -0.529959629787005 0.0578074116121687 -0.423054729464031 0.161646365983804 0.144058306554704 1.06670034617531 -1.13260216413510 -0.405717613045253 0.557978650918413 0.423197190083033 0.448651767571315 -0.149333225937198 0.669722366688161 0.197884005604119 -0.0702971282483826 -0.720602187341333 -1.00983909808622 -0.0327880279724312
MMP0230 -1.21090850603688 -1.13949623286185 -0.963557276271924 -1.08857580030417 -1.28581351354709 0.762792367403678 0.193866170785170 0.252466371939136 -0.11591069095322 0.233160568737228 -0.237398954900673 -1.40447743312285 -0.538002194857505 0.775665834556107 0.74590593882344 1.01472372314374 0.926151961609534 -0.461195550381529 -0.230702308160449 0.501299355650816 0.536519141061158 0.946829092017357 0.91053063299366 -1.40900658297813 -1.36178255355336 0.716490777249613 0.592006609790122 -1.35123009744827 -1.36387300281770 0.943172115287615 0.865310949701888 -0.592006609790122 -0.717852754989163 -0.425961339320286 -0.0364511060447942 0.101405604229670 0.0364511060447942 -0.152993492665712 -2.25906542546989 1.39142351391807 1.20398687749636 1.32334335465502 -1.65171774640040 -1.75202393354432 -1.97732968892906 -1.78313164745371 -1.91701664090874 0.73445205192407 0.787283158306398 0.991225484174757 -0.343948228753759 -0.231095486681683 -0.586717653038622 -0.382106939136685 0.599578800823657 0.479185692527605 0.348074245851762
MMP0239 -1.67865025719985 -0.981217877187483 -1.12662505004226 -1.40558393809657 -0.90683687617048 0.711805804124198 0.429128347583175 -0.141144068515378 0.271480501357755 -0.749587001949127 -0.968934795563597 -0.240898557169905 -0.531969749992446 0.0407971637201874 1.18205561211806 0.556887799032737 0.517981132840065 -0.0407971637201874 0.459297242984359 1.90129981142441 1.20243283174291 1.69754185587629 1.75690545956664 -1.39737168263185 -1.18848822055083 0.603662739181672 0.580825932308216 -0.878792519965732 -0.829397433548277 0.28678201267816 0.490303984822503 -0.358811903824661 -0.28678201267816 -0.116599815027991 0.148679036695753 0.0914801533152695 -0.0914801533152695 -0.32826830647307 1.54798556015595 -0.429148556904361 0.144040475688595 0.183742164095694 -0.0412549035844565 -0.0486306438001455 0.337128288743474 -0.571573313736601 0.0718110626499028 0.610121568840052 0.91155290172232 1.19899942705464 -2.32774483815034 -1.53411621030635 -1.70946825119187 -1.61109600616659 0.0412549035844565 0.288761513971174 0.679054136153453
MMP0756 -1.11930319223533 -0.581135658984733 -0.57714356510428 -0.911884000156813 -1.05323946374857 0.84558536595463 0.393617241504953 0.449068184125193 0.226743177104584 0.256376759318890 -0.814508289313292 -0.356575180628065 -0.236892337673416 0.403308355692211 0.443282601143204 0.401830738338942 0.236892337673416 -0.596933103607603 -0.619327529379882 1.17441986766260 0.576855191147848 1.25457592785314 1.19966290841143 -1.1892779704666 -1.24064947503793 1.13792426100294 0.848895514284736 -0.615514234135804 -0.634550883596655 1.29512323678524 1.28167014779105 -0.904702074544307 -0.921923841681409 -1.46071352913295 0.725802260313261 0.355605079653908 0.44492642520239 -0.355605079653908 -1.53500058879704 0.892112911610087 0.815641775765844 1.04452225530059 -1.2697409441241 -1.40591487280751 -1.41706429747685 -1.47023583322653 -1.88560500613024 0.829266578993748 0.990526794530096 0.944206771827328 -0.996863357251523 -1.15920754145761 -1.23991431524985 -1.15217967518016 0.723689651960811 0.671748196090482 0.52601977227161
MMP0888 -0.606714425998105 0.054815448315424 -0.00838117244084382 0.876466719719323 0.51625956031353 -0.334952806826783 0.228794488372526 0.58424870296036 0.627512864320071 1.62232158496262 -1.604466979947 -1.2922931627702 -1.38709328508605 0.937871140230398 1.15800666932628 -0.49390082939969 -0.593278801379307 -0.157781320832264 -0.485591548309714 0.664970174104221 0.157781320832264 1.42755768806787 1.14936371085374 -1.35301641734431 -1.14161829626227 0.99544180565579 0.771360597463512 -0.888323333978374 -0.879527852393762 0.908765428991201 0.687295417016662 -0.687295417016662 -0.784002945368182 0.0265871246985577 0.127883852051293 0.170083563489299 -0.0265871246985577 -0.161199413712877 -2.38236750707985 0.447235480557080 0.647366622511287 0.420174384964510 -0.713036879988374 -0.999741075377324 -1.00230979608040 -0.781695448886047 -1.00547686196155 0.931444700134596 1.08355607779288 0.604659118441124 0.228796256580084 -0.178433088840656 -0.141750663467044 -0.35032816418381 NA 0.00838117244084382 0.246225466860289
MMP0889 -0.986680770160585 0.0185552539979855 0.00858992341045472 0.472628886692368 0.506513440603493 -0.329355930384543 0.497267581277373 0.49212144856522 0.640136795155537 1.01234107114063 -1.47586407681455 -0.402808207347941 -0.531440617637058 1.04812718856589 0.876525432377987 -0.524439917726089 -0.274626355206395 0.274626355206395 0.578949049153439 -0.297546971509487 -0.903469279039331 1.11230633176081 1.19470648542621 -1.49388551063828 -1.48489906148227 0.688642054524794 0.708439836357169 -0.559951055910743 -0.560476964942913 0.650201309009936 0.570907781501284 -1.34116306038182 -1.24969263609815 0.0833825584978248 0.0922947024020458 0.137620605995735 -0.0833825584978248 -0.181191087305260 -2.28508720029059 0.519270832023784 NA 0.533964001239786 NA -0.442839431140815 NA NA -1.12402754577751 0.685561196126493 0.586262159615989 0.591933567216754 -2.08690816861224 -0.0270198131258776 NA -0.0901007551277984 NA -0.0427566617041503 0.118223167501366
MMP0918 -0.444843486488382 0.329857311696080 0.473666023045011 -0.737134273353109 -0.714088112023959 0.527491190951891 0.0212391754311620 1.03360000058427 0.79490721946027 0.375211653583511 -0.128333831236752 -0.166277568318571 -0.495441640024201 0.668712975188893 0.801990464592432 1.63274155636084 1.52261792172605 -1.40569786298991 -0.463628975444254 0.0455379209337692 -0.97290398525196 1.18873441884139 1.22931215618463 -1.49426239332666 -1.50310817024466 0.849041548850548 0.80838646856456 -0.452300422745021 -0.353634426373736 1.05766502714671 1.12900891768346 -1.25334285329817 -1.29107353805147 0.478001403344998 0.543669555564679 0.0765058928683148 -0.203920646415080 -0.550015337918155 -0.0765058928683148 1.93999163137512 1.76891563267790 1.98895653181312 -0.510676820071511 -0.72949364758519 -0.398864932585427 -0.708259010027254 -0.58503710000774 1.92402570923832 2.15176191354573 2.45436689263186 0 0.0567623766412023 0.0617860455023878 -0.0412522000851134 -1.81641501514918 NA 0.956693372092762
MMP1042 -0.80933430172801 -0.622417126610613 -0.492507295191663 -0.828348683280644 -0.9507155402592 1.58374448980811 0.290744612386415 0.979801290448899 0.93346650448442 0.908883605784223 -0.393640200013197 -0.770994684932064 -0.823649747977926 0.401982012919592 0.362887511131058 0.817530322564804 0.748356173317715 -0.362887511131058 -0.436963115194057 0.526424482146879 0.489242487765766 0.744057643229295 0.689127245974857 -1.11399181068932 -1.09680101227729 1.0907301204269 1.12384784665543 -0.896574268323454 -0.984693650146903 1.09498768446537 1.08808214265713 -1.13234685510313 -1.15034665327816 0.267594414689946 0.0199541825478525 0.0520776671426549 -0.0199541825478525 -0.051325225161155 -2.75534124598581 0.901859412146076 NA 0.852770326128387 -0.37957587153027 -0.85663094725701 -0.621358645176411 -0.952340293673297 -1.03315027942764 1.28786712864470 1.37781342312324 1.25906662725563 -0.333459683033291 -0.604886608378918 -0.508744759937287 -0.747933355874763 2.02891093332988 0.913773496152649 0.907403267152189
MMP1046 -0.331600605063362 -0.146999282198592 -0.246674723440193 -0.706495305348143 -0.997672164839626 1.83874565938112 0.445622993892107 1.04651028582904 1.23560775768078 0.969816945464576 -0.351161153777852 -0.68111165737552 -0.677103838712305 0.820753244680563 0.94499605502305 0.577764359923137 0.492546120204944 -0.811684662430445 -0.492546120204944 0.863242877744395 0.522750224174055 0.805483808152222 0.731530353071323 -0.920827261692584 -0.840617252235799 1.01578319447270 1.01447923432071 -0.939668475350353 -0.97160959171698 1.27912376690064 1.36173819401888 -1.19931090480460 -1.17391660822381 0.187545052667941 0.0391355104871992 -0.00221327525333130 -0.110234833353904 -0.119259506092294 -2.80157754140476 0.942738404102914 1.46180012913469 0.937394539025423 -0.344917315737847 -0.509324096919216 -0.342387782410841 -0.776333092374438 -0.571961616323916 1.46042781025872 1.47437955353561 1.54491144083222 -0.516275959937028 -0.864605415963673 -0.49721809927835 -0.69066301796105 NA 1.99801319716042 NA
MMP1096 0.0393409704819621 -0.115433703236755 -0.163127019820305 -0.0884906403752008 -0.157599064098459 0.107294672242245 1.56151657680726 1.98150755775919 1.24456623218995 2.00017182893250 -2.14423866883774 -1.34897917174771 -1.17510997543735 1.51865666347588 2.23163802418581 0.362514174219263 0.0303914193756495 0.396054438739635 0.168635350470205 1.59504816110303 0.839586540814775 1.00443860490976 1.01554728425200 -1.10245056072823 -1.19780016913464 1.04685854677527 0.978546829296804 -1.10437562920261 -1.01195883301657 1.05917546054243 0.970092657190758 -0.948499281959046 -0.977971458054057 0.000453732820568564 -0.08363808325814 -1.39099358358972 -0.000453732820568564 0.256359043621243 0.748507909664621 -0.708308965952111 -0.773341544111397 -0.735822174395024 0.504952305109361 0.538166755488653 0.389441688297404 0.103432426596707 0.0380991172020666 -0.414824346050941 -0.401568843495818 -0.426613425334135 0.210953355666542 0.576046797408324 -0.152010831008842 0.430893387673168 -0.855978011749513 -0.666689988269271 -1.14044235401923
MMP1304 -1.92911704570244 -0.0467358029913419 0.0467358029913419 0.292719190086269 0.486134745435986 0.120751644415676 0.160883084060023 0.320233294997015 0.630900343704558 1.15259481688435 -1.18095296372321 -1.22242474350349 -1.55786223342841 0.305307876014481 0.310867763335447 0.407350273666322 0.459333407505297 -0.30384248727904 -0.308399776017067 1.81245207582999 1.78604884708196 1.48708322333539 1.54828458462840 -0.89684184284359 -0.816074204925553 1.11027664730070 0.72782909973951 -0.704635638268704 -0.757668808096225 0.754558412990606 0.597462991342124 -1.59856884401143 -1.37542067629314 -0.483136435642876 0.676810988078786 0.512696438224837 0.309491611732447 -0.309491611732447 -1.02329298555587 -0.383561019685142 -0.153214220409082 -0.281281316806673 0.546330077427039 0.73225552448772 0.90902637627935 0.268703830300329 0.429640263819623 -0.431403500971734 -0.57624727339232 -0.4223421413874 0.315829124242447 0.325715624030078 0.573574433184393 0.527250354834964 -0.64919494531245 -0.818828965115517 -0.294887428575486
MMP1305 -0.666799245945444 -0.279824243976126 -0.553428806269889 -0.920484780103858 -0.728220392282405 1.38721099091777 0.062852839908955 0.911762104091885 1.03367954880574 1.01308664889863 -1.33389883296747 -1.04783687058656 -0.870884626315118 0.480820218226947 0.775168987531802 0.389381626145531 0.245359350926749 -0.547254270549804 -0.245359350926749 1.03161836135110 1.22252032910325 0.951253456408129 0.821288911275333 -0.842667223669834 -0.78765435649107 0.65798237910076 0.81211216106856 -1.65333785757027 -1.32703183988716 0.962972680197942 0.927177568785262 -1.56255409900359 -1.34067986711955 0.0658539661024086 0.713042521463352 0.0887317099904954 -0.0658539661024086 -0.476015052177828 -0.335823046152620 0.398945259130654 0.760021725866882 0.308271372136534 -0.309092823650609 -0.590816278498282 0.256164927381216 -0.773026627185831 -0.199775612930143 1.334174428338 1.33355902528503 1.37540377588702 -0.4236019600882 -0.290671734607600 -0.0263997431788163 -0.374220608994760 0.195497551139703 -0.108589619286940 1.03446826890078
MMP1467 -0.446652352771962 0.313499802041166 0.302466112430085 -1.73239575258932 -1.04926131956563 2.95321207918003 1.59999365110560 0.764547576155418 0.786093258919477 0.756096218796479 0.525024926869772 -0.869822660177992 -0.57931162551055 0.58094959903537 0.590913238581635 0.406496209708858 0.263998968029015 -0.993267774266497 -1.33599200428176 0.906746457441836 0.639309985645754 1.12284154277881 0.93872035716081 -0.810869956253979 -0.638461242151856 0.323366032254467 0.634265493512945 -0.758198493887915 -0.323366032254467 0.810246735823933 0.895472074612035 -1.16705153918978 -0.888468429750339 -0.0110850843029734 0.189459012966684 -0.0105521475576381 0.0838842437157696 0.0105521475576381 -2.38984824710690 0.349325546167713 1.14910346130008 0.301346212181487 -0.753792397678631 -1.50339254531074 -0.445326879352191 -0.967747770441278 -1.09984911760029 1.12727924003859 1.86078074786865 2.08842082092925 0.0793560371824213 -0.88916563423492 -0.394434632969256 -0.945524539909087 0.840826690855613 0.0276384760082768 0.524325750061638
[+] Show/hide bicluster #46 motif PSSM #1. bicluster 46 motif PSSM #1 Methanococcus maripaludis S2 15x4
POSITION A C G T
1 0 0 1 0
2 1 0 0 0
3 0 0 0 1
4 0 0 1 0
5 0 0 0 1
6 0 0 1 0
7 0 0 0 1
8 0 0 1 0
9 0 1 0 0
10 0 0 0 1
11 0 1 0 0
12 0 1 0 0
13 0 0 1 0
14 1 0 0 0
15 0 0 1 0 [+] Show/hide bicluster #46 motif PSSM #2. bicluster 46 motif PSSM #2 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 1 0 0 0
4 1 0 0 0
5 0 0 1 0
6 0 0 0 1
7 0 0 1 0
8 0 0 1 0
9 0 0.5 0 0.5
10 0 0 1 0
11 0 1 0 0 |