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[+] Show/hide bicluster #3 rows and columns.
bicluster 3
Methanococcus maripaludis S2
6x59
[+] Show/hide bicluster #3 rows (genes).
bicluster 3 genes
Methanococcus maripaludis S2
6
[+] Show/hide bicluster #3 rows (short gene names).
bicluster 3 short names
Methanococcus maripaludis S2
6
short_name
[+] Show/hide bicluster #3 rows (long gene names).
bicluster 3 long names
Methanococcus maripaludis S2
6
long_name
[+] Show/hide bicluster #3 rows (NCBI RefSeq gene IDs).
bicluster 3 NCBI RefSeq IDs
Methanococcus maripaludis S2
12
[+] Show/hide bicluster #3 gene upstream sequences.
bicluster 3 upstream sequences
Methanococcus maripaludis S2
6
upstream
[+] Show/hide bicluster #3 columns (arrays; conditions).
bicluster 3 arrays
Methanococcus maripaludis S2
59
[+] Show/hide bicluster #3 ratios.
bicluster 3 ratios
Methanococcus maripaludis S2
6x59
GENES H_vs_Leu_3000070259B.2 H_vs_Leu_3000070260A.1 H_vs_Leu_3000070260B.1 H_vs_Leu_3000070261A.1 H_vs_Leu_3000070261B.1 H_vs_PO4_3000070249A.2 S2_vs_S40_BR1_3000069793A S2_vs_S40_BR1_3000069793B S2_vs_S40_BR2_3000070262A S2_vs_S40_BR2_3000070262B S2_vs_S40_BR2_3000070263A S2_vs_S40_BR2_3000070263B S2_vs_S40_BR3_3000070265A S2_vs_S40_BR3_3000070266A S2_vs_S40_BR3_3000070266B S2_vs_S40_BR4_3000070272A S2_vs_S40_BR4_3000070272B S2_vs_S40_BR4_3000070273A S2_vs_S40_BR4_3000070273B leu_vs_PO4_BR1_3000070030A leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR2_3000070243A leu_vs_PO4_BR2_3000070243B leu_vs_PO4_BR2_3000070244A leu_vs_PO4_BR2_3000070244B leu_vs_PO4_BR3_3000070251A leu_vs_PO4_BR3_3000070251B leu_vs_PO4_BR3_3000070252A leu_vs_PO4_BR3_3000070252B leu_vs_PO4_BR4_3000070256A leu_vs_PO4_BR4_3000070257A leu_vs_PO4_BR4_3000070257B mma_0070m_0.2 mma_0334m_0.402 mma_0492m_0.598 mma_0649m_0.885 mma_0783m_1.23 mma_0849m_1.4 mma_0912m_1.56 mma_1444m_1.58 rapid_H_vs_slow_H_3000070041A.1 rapid_H_vs_slow_H_3000070042A.1 rapid_H_vs_slow_H_3000070042B.1 rapid_PO4_vs_slow_PO4_3000069786A.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Alow.3 rapid_PO4_vs_slow_PO4_3000069790B.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023A.1 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023B.1 rapid_PO4_vs_slow_PO4_3000070023Blow.1 rapid_PO4_vs_slow_PO4_3000070024A.1 rapid_PO4_vs_slow_PO4_3000070024Alow.1 rapid_PO4_vs_slow_PO4_3000070024B.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0017 0.859765380876262 -1.31858623424333 -0.922605572717612 0.918425598040022 0.656423738409262 0.459880686726922 -0.0559765403441735 0.362528056666451 -0.988630829176438 -0.96099938298623 0.75630600956774 0.468381257259332 -2.07227880139063 1.04510059512941 1.36070038453914 -0.375201452761071 0.0559765403441735 0.90612560231737 1.08963507635406 1.32941886935586 1.23692577043089 -0.925197007641522 -1.03796807234913 0.52121537807055 0.516906738453651 -0.516906738453651 -0.637499475747893 0.960196432987433 0.987759345951217 -1.43456194230447 -1.30412489098727 0.788918671371214 -0.871289108586084 -0.766106528964176 0.804022613559966 -0.223063815425992 0.146053192034112 0.179760983854610 0.289394742399496 -0.146053192034112 -1.56453380772788 -2.13956871175478 -1.39819797781077 0.362877958686897 0.590843367117956 0.78150027152474 0.815508245911639 1.47234475535008 1.49796427874178 1.41968674957718 1.51921446099551 -0.970554992113356 -0.564649127892968 -0.706405395495692 -0.854009185438035 0.705090440803 0.750553594858416 1.02370761802843 0.684541261102628
MMP1044 0.49915541391127 -1.41002802598055 -1.46673870769057 1.41246531527230 1.22750004006786 0.569082284482991 -0.0676021642290707 0.165609502213253 -1.30665816254282 -1.28955466150393 0.667324630083653 0.648641347301086 -1.85410449665637 1.13147824464392 1.20311295817081 -0.084457067730979 0.0676021642290707 0.469314741547413 0.515835665928762 1.05409065929758 1.00638627687512 -0.898464829104492 -0.841375653051893 0.539959026534903 0.566817581207693 -0.539959026534903 -0.757476333757937 1.13474431564250 1.12104235128591 -0.962000695015474 -1.0677868520988 1.19869889383441 -1.03604080686313 -1.12976633798294 0.262162084066208 0.0385888960427331 0.079208786614031 0.0388182018766033 -0.0385888960427331 -0.0848104005557181 -0.372949559801796 -2.79369848999355 -1.31479511958111 0.677426045614608 0.736251480719495 0.880950582038221 0.610319730414203 2.02622518168759 1.00117588512015 1.13757374276053 0.94442769338589 -0.993108191654154 -0.758700679590986 -0.930399700393193 -0.876865758567374 1.69866037286914 0.811751738551574 1.50741601184599 0.863056648584933
MMP1045 0.915973569216244 -1.56442221269629 -1.24819967529105 1.41643086179426 1.31396126616084 0.832044596337096 0.138077791254757 0.18029035991209 -0.947368788138703 -0.922882407004182 0.495235362635065 0.557583981282336 -2.04736817220921 1.20620143278974 1.42870008245996 -0.547346179452246 -0.138077791254757 0.815179658683186 0.881837385666651 1.06510696650364 1.00970703657092 -0.862782831334041 -0.83402572695898 0.717684771830975 0.593547414940714 -0.593547414940714 -0.692733638652532 1.15374937856330 0.930255737489737 -1.20860691544613 -1.20540787806734 0.985837082883262 -1.16698245741952 -1.09959577299319 0.394949706607588 0.061385943540034 0.132727744294074 0.0436866418262454 -0.0436866418262454 -0.0523320699710576 -0.0729585638913573 -2.72996412231782 -1.06596785917948 0.801194407534328 0.929940790763652 1.22881150351483 0.958565076567641 1.22152147661338 1.13002445114677 1.28149121811657 1.34817114991960 -0.799579782927737 -0.548629730888201 -0.543141688054859 -0.672940107789644 1.2534034692622 1.03379071282264 1.31217433417808 1.16659586885498
MMP1563 -0.0285507077923935 -1.88952335239225 -1.83870284336367 1.35955747686619 1.53371547766184 1.30320970142662 0.205521845078232 0.242726357780533 -1.17016490373614 -1.11889868291485 0.303862297685556 0.407361561441733 -2.13280442446087 0.884862299160305 0.960103049075272 -0.281149906341349 -0.205521845078232 0.552516555535483 0.652414511173269 1.02420189729815 1.09192403344551 -0.901439347006226 -0.882325737039641 0.587155750229733 0.542019117233311 -0.542019117233311 -0.67800463268682 1.03847577680262 1.19933539711988 -1.51594198112973 -1.46107726091197 0.720447350499987 -0.86649246094507 -0.9253139671908 0.0646892896075352 -0.0661685521667224 0.0425382810289362 0.0789888276796787 -0.00601187475977388 0.00601187475977385 -0.783686752990963 -2.80606625025521 -1.02891477688604 0.27664097732842 0.389742107442289 1.59765045948739 1.13594618179900 1.03105397832234 0.933075875165341 1.12043918571827 1.08759475264883 -1.01686535863585 -0.854379267607053 -1.06599939882675 -1.09795087116448 1.46241798627045 1.35188489868080 1.46843525257804 1.21213812052846
MMP1564 -0.152409794509257 -0.838999025094863 -0.960715694311836 1.19995614869107 1.10651560851694 0.87870087265477 0.137060088981687 0.18862632203641 -1.19619251344168 -1.18386620109581 0.604101296834495 0.556068685930273 -1.86948988533488 0.687686288270168 0.846621090165552 -0.138639149960716 -0.137060088981687 0.529261518027157 0.615803960930778 0.736282655798248 0.79325673431828 -0.713509832344238 -0.791968449524746 0.811972589421415 0.751070819217125 -0.748711549033426 -0.791436342558402 0.985859150043072 1.18352257295943 -1.57764267095844 -1.37630967910007 0.763114786871537 -1.09310095786351 -1.17747200968979 0.294355957608891 -0.152801705802146 -0.0371679824924138 0.0371679824924138 0.0592822659825238 0.149947022046968 -0.622416214753914 -2.76106915923292 -0.467575808969958 0.495055614541362 0.332542360730545 2.90172405827182 0.791943036279957 2.52652002956984 0.793652924062456 1.98365337022220 1.06008281722519 -1.39309986640556 0.0176515318958282 -1.71725946731373 -0.112233988594413 1.89794308954012 1.15606012714961 NA 1.11099445288064
MMP1566 -0.250740624690129 -1.68720762944886 -1.69791517887765 1.47738817149120 1.61574789339839 1.36029265254981 0.365453358578011 0.238859669268771 -0.934278077194233 -1.09824053808967 0.278911461186258 0.314411842661572 -1.95740768138131 1.06905765272196 0.907975980931028 -0.463109393405697 -0.238859669268771 0.710334859997798 0.573222809614792 0.914755866790519 0.817423121992147 -0.8689063950299 -0.920449181186545 0.917669376457066 0.653519219380859 -0.760924544199372 -0.653519219380859 0.992726852687326 1.03839453969934 -1.50748959871867 -1.04824479548508 0.770933630657194 -1.14141400762182 -1.16377717904466 -0.0124852625057175 -0.0114683632971070 0.0999762573798707 0.0872085228717613 0.0114683632971070 0.0897696023601137 -0.299326165201176 -2.80997498539314 -0.426133113949022 0.149665440765833 0.0715656252701863 1.77691012879060 0.740259019821155 1.11243388347977 1.15670729764823 0.80250459198784 0.820886981286473 -0.503527996407507 -0.69715336793636 -1.40231634916086 -0.861374396575737 1.45052107835931 1.24178221772498 1.05843716013565 1.03511253127623
[+] Show/hide bicluster #3 motif PSSM #1. bicluster 3 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 0 1 0
4 0 0 1 0
5 0 0.5 0.5 0
6 1 0 0 0 [+] Show/hide bicluster #3 motif PSSM #2. bicluster 3 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 0.5 0 0 0.5
3 0 0 1 0
4 0 0 1 0
5 0 0 0 1
6 0 0 1 0 |