|
[+] Show/hide bicluster #95 rows and columns.
bicluster 95
Mycobacterium tuberculosis H37Rv
25x39
[+] Show/hide bicluster #95 rows (genes).
bicluster 95 genes
Mycobacterium tuberculosis H37Rv
25
[+] Show/hide bicluster #95 rows (short gene names).
bicluster 95 short names
Mycobacterium tuberculosis H37Rv
25
short_name
[+] Show/hide bicluster #95 rows (long gene names).
bicluster 95 long names
Mycobacterium tuberculosis H37Rv
25
long_name
[+] Show/hide bicluster #95 rows (NCBI RefSeq gene IDs).
bicluster 95 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
48
[+] Show/hide bicluster #95 gene upstream sequences.
bicluster 95 upstream sequences
Mycobacterium tuberculosis H37Rv
24
upstream
[+] Show/hide bicluster #95 columns (arrays; conditions).
bicluster 95 arrays
Mycobacterium tuberculosis H37Rv
39
[+] Show/hide bicluster #95 ratios.
bicluster 95 ratios
Mycobacterium tuberculosis H37Rv
25x39
GENES Amikacin Antimycin Ascididemin_Natural_product BZA Cap Clotrimazole CPZ DCCD DIPED Dipyridyl DNP DTT Econazole EMB GSNO H2O2 Levo menadione Mtm Nam NRP_1 Oflox PA_1 PA_21 Procept_6778 Rif Rifp Rox SM Tet TLM TRC Valinomycin X_109 X_111891 X_111895 X_121940 X_241 X_59
ORF04687 1.76736120870974 -0.765630814905457 -0.211127647078437 -0.22950376883316 2.28384927968456 -0.0175922299994193 -0.253895430542150 0.864503320081086 -0.190469450530169 -0.422067426863122 1.70126685929910 0.0969949029112249 0.280694729226626 0.429380960861415 0.209781766171259 -1.21403087256730 0.321808899498003 1.03831113474340 -0.904318935213006 -0.80707541438815 1.15034182839425 0.669023366868533 -0.315182341178730 -0.278687668470891 -0.325868951318297 -1.65761815152890 -0.126115495951917 3.96791229565774 1.2841623248831 2.16007649267117 -0.490477228965764 0.247706061879416 0.391677361569505 -0.117131275108901 0.0904888692344739 -0.0607862914374662 0.175202656465617 -0.255713803080079 -0.291466152132450
Rv0654 1.60382373890746 -0.0437395822282255 0.317193517359678 -0.209216144243444 2.3685128568165 -0.459296349434241 -0.105565266112232 1.09799382635125 -0.420336955897763 0.720928093178229 1.53359232871118 0.823280425779633 -0.306714974295889 -0.447963657521337 -0.149653100507148 0.257760185172046 -0.157584367815258 0.479015224123848 0.0334168359107908 0.512867691446609 0.595063480513072 -0.127363338641059 0.0979116889867621 0.224353813360766 0.401907641552105 -0.611305087111812 -0.216390817478713 2.54247586636888 0.675261816918006 2.88055570075436 -0.0871213418217879 0.127985377170322 0.6363383548163 -0.672618564204237 -0.339974255286816 0.467465214518368 0.258989744208822 -0.534997215171054 -0.394194620475591
Rv0748 0.898385126748284 -0.65788192004503 -0.0761592902478267 0.785584524657644 3.24667010010863 -0.379706188833041 -0.175923096809119 0.60205463039735 -0.280280757263694 -0.308017828843254 1.58917880210221 0.83560668296451 0.0856117975847172 -0.185516389274247 -0.135886632189989 -0.640727783630582 0.575636468496202 1.40259259786125 0 0.221209254593128 2.05622431510580 0.200921669292827 0.124227943329784 -0.0590181741810208 0.00810802023611282 -1.09384712584229 -0.174849697990298 4.60258950560197 0.707590452781087 2.25054969505186 -0.700974452247752 0.438402335099731 -0.119733681786776 -0.0428562777399063 0.55328204374533 0.338123113064858 0.590069625233412 -0.0565869666164801 -0.0539097985117905
Rv0805 2.48924483544641 -0.674692433910576 0.0861021982650032 -1.02257467333906 1.59867187876233 -0.0350119337370035 -0.427309878094067 0.164185835122082 -0.0472341452999398 -0.493635458424751 -1.25079063930755 0.942389368194773 -0.131705919558672 0.798453816827027 -0.0321361185684246 -0.174527762817603 1.06684154130050 0.338997114290549 0.0877556030836594 -0.82343438496547 2.27700652115216 0.833808056309049 -0.435315560630585 -0.272295165231755 -0.533066648723639 -1.02252719607472 -0.642419793962749 2.76796306747449 1.66373189889104 1.43901631238039 0.935600050871045 -0.163734584507959 0.0372686502100583 0.592291135960568 -0.00764637375448908 -0.165749123844585 1.63375537275380 0.0782874956055248 0.378356103236855
Rv1284 2.36729036493798 -0.0860124455706453 -0.179459876809332 0.393993102441578 3.18110841425195 0.210585528053888 -0.44873044167605 0.45420704176775 -0.118076107864066 -0.00617981406274309 2.31298708763274 0.101499632362953 0.500101554452735 -0.251175644174701 -0.023803731026572 -0.211306177629288 0.848104216961775 1.04371857849132 -0.212919514211487 0.157944757396092 1.85608825049044 0.113889418158384 -0.0266955252178538 -0.0392819104707488 -0.786808398160832 -0.597567046303142 0.384223648039349 3.51582321256823 0.236675281614283 2.28075650546430 -0.467945755943656 0.486318347837673 1.12774347739245 -0.868701178302532 -0.239825620140607 0.279534817389744 1.10326097209334 -0.827145126782469 -0.810606788299072
Rv1290c 2.71761502074155 -0.178889074753209 -0.388593755051519 -0.267013810753006 2.92195756558107 -0.305755943487393 -0.0611749856976375 0.249604712883676 -0.641508245044708 -0.461210968452337 1.29419465328759 -1.08555311412233 0.208341367681657 -0.250377456380533 -0.227114658493935 -0.0417513575449913 1.10988214293890 -0.646344488165204 0.515712583804168 -0.0938367628315888 0.698078069564754 0.764884594058959 -0.23885635045229 -0.172544272596048 -0.173600076852376 -2.02055865144413 0.118187776313655 3.4279542168161 1.47401790384462 2.33202197284918 -0.296152238920178 -1.64925943438447 -0.749973952469846 -0.318575480006169 0.0508722216862110 -0.418889900080495 1.77962411025878 -0.151553904740887 -0.261007177534031
Rv1486c 0.936610287284839 -0.766688738073868 -0.383935294265233 -0.010348430290269 1.91622113527214 -0.617158449534244 -0.243019954090874 0 0.345610444478338 -0.717050583525331 0 0.177671677019088 -0.460917175259611 -0.274634807171396 0 -0.514933513077414 0.220784074495556 1.12263243249538 -0.143354134702153 -0.0753936988072957 1.13507306092470 0.0640987025064428 -0.85340789526407 -1.30449762274802 0.152129765928158 -0.231672126762769 -0.339864061853075 3.25355319672733 0.216772484879493 2.33564451060649 -0.210676094462188 -0.0919102951620343 -0.629586907444327 -0.274580957295547 -0.252774205795323 -0.464254847719654 0.577912333983927 -0.17173698930512 -0.871720236624078
Rv1869c 2.11067192146765 -0.262936579571947 -0.521519929069958 0.67876159259303 2.45640230485733 0.387823704770991 -0.709302566017277 0.365226182263684 0.514872897118252 -0.097386483389870 -0.575560235044964 0.552814477829582 -0.520430753353525 -0.54495570663882 0.592289005716459 -0.621931090001947 -0.186928060246310 -0.176923971319545 -0.201795309679374 0.379660961873400 0.777627613018379 0.275034955957173 -0.36498943474452 -0.230149008692521 0.809609837213772 0.478242549564512 -0.820754891280532 3.36152824631397 1.10925195594537 2.8812746333848 -0.164764434274873 -0.642646509978693 1.75552876726699 -0.303319187084415 -0.0885359843219323 -0.965914121689816 -0.128976855689029 -0.849674107084705 -0.510866465431683
Rv1891 2.00062962236884 0.0406659113085387 -0.713192549387534 -0.204180736108532 1.97354024197772 -0.130034671495523 -0.346941752715638 0.436890594979929 0.076388563664649 0.108081051259420 0.896253741058313 0.109699531740075 -0.59886471428598 -0.411750662980318 -0.286934782459182 -1.29232723451650 1.32774042952422 0.484993317738222 -0.503278852806954 -0.447133659261632 0.45971583078103 0.741110602609982 -0.103840503645472 0.0523498950369433 -0.653905854936466 -1.53711786112525 -0.0798592728989107 3.68414374897768 0.703346454841771 2.78469230047831 -0.243538300861703 -1.07209636134850 0.701922768206636 -0.81431267240219 -0.057452457095246 -0.235462281026303 0 -1.32010569460854 -0.952385254725295
Rv1892 1.83895272111710 0.185444210736459 -0.361618858625031 -0.145512598533425 2.59929136815703 0.239715236459377 1.24848224607561 0 0.605185361695865 0.268438936607859 0 1.86510135921092 0.575042024093359 -0.312962198268662 0 -1.34084567474095 0.915919247216932 1.37564883634118 -0.286667093844209 -0.151973934950413 0 -0.227810452033937 0.488268007321201 0.69432431630581 -0.621541263469534 -2.04688926038577 -0.49545466660594 4.04503473361573 0.376098561740565 2.84878560071591 -0.133927762280604 -0.51105116494116 1.29542799371825 -0.463280360928626 0.171530422491418 0.657764656079883 -0.530124402691494 -0.678306047460723 -0.273325639718529
Rv1893 1.45356991871378 0.116454153342589 -0.372388127423101 -0.78445894754847 1.53341268736144 0.481268257138739 0.620027555265057 1.40939906778084 -0.831393884874684 -0.565373706787885 1.98009593100085 1.13984842181668 0.709743942961252 -0.849798398972912 -0.453290008682012 -1.68334750713869 0.379257585814577 -1.08162055718799 -1.55010691392095 -0.846277778085106 -0.257084302671403 0.246199563315907 -0.00819756305504133 -0.0397231709160109 -0.83924150936134 -0.748258259627123 0.183300441954696 2.48058007162890 -0.0415509520700703 1.93700660238565 -0.232202457921624 0.990001969726543 0.127159377172299 -0.556768700380825 -0.799078346010565 0.0981232550310394 -0.201227850329385 -0.379854119118062 -0.509863805788604
Rv1904 2.82487584768661 0.522330899924048 0.040735631217442 -1.13979118547802 2.75258310118905 -0.516462618856233 -0.686717164500094 0 -0.944059451246644 -0.112821160554432 0 -0.703054004198042 -0.20905787353751 -0.111550432807669 -0.952075864470075 -0.471815768292424 0.368026463656254 0.166284833089480 -0.0254943980950132 -0.841997352047264 -0.299747105614375 -0.98127120595368 -0.652526504058288 -0.276116000504270 -0.50346260367905 -0.512106725607595 -0.282775462361368 4.57756581317175 -0.0584772059263116 1.75892758876980 -0.179427478521644 -1.21209726893512 0.00574832263788515 -0.124000061950352 -0.497421620053082 -0.191264173503142 0.890056997743652 -0.727826435594774 -0.338241400660035
Rv1926c 1.80399019862243 0 -0.473842152916305 0.97242093936016 2.08837313709998 0.203616592929335 -1.05669658076815 -0.862502816314887 -0.544209597150961 -0.373589453175806 0.845368731496088 0.989717237081611 0.0612650093730639 -0.415815456566448 -0.0695000351904472 0.0807902883396985 0.601347035635466 -0.564593790449053 0.190366416995424 0.615377247249362 0.0438855700687779 0.85212401942404 -0.384373971530522 -0.566593184863125 -0.82187038434861 -0.0524478851814914 0.484697752046155 2.49556928910297 0.41104755993 1.45842660374246 0.139851613706000 0.335444273795281 0.0898091212910913 -1.05359787038269 -0.458514359219965 -0.115492208647507 -0.235183807328415 -1.65402583532214 -1.03476936437443
Rv2161c 1.89251075614584 -0.188591435036435 0.62632680454509 0.377039270609465 0.562580579925996 -0.266245781036826 -0.162925474568131 0.00681236806017208 -0.102199545389787 0.38218294705637 0.481880193251542 0.674386274997307 -0.503922934443955 -0.307604766103804 -0.209799144799214 -0.973217157642596 -0.273510513229666 -0.344867894362339 -0.843197374107365 0.516511391150456 0.538887317624197 -0.461889645432928 -1.1382947950368 -0.694842009951723 0.428775106580753 -0.126093581059698 0.151306554536429 3.04135122793383 0.430431314714744 2.83030264729593 -0.658419219976348 0.453154736683082 1.76261095962436 0.232858083286631 -0.936576197287956 0.0653132312282052 0.200785092445615 0.000667760936762079 -0.292904082467155
Rv2182c 2.19598316714141 -0.902618052256992 0.0284937459373687 0.598360445151596 1.70050411594580 -0.306253839958928 0.399414045843203 -0.518831086222621 -1.30437661862913 -1.06776005592941 0.748156445369122 -0.206047980171974 -0.334584069495015 -0.773075396743612 -0.907587041232746 -0.519455628305941 -0.415660795445613 0.926688490934901 -0.759676680995733 0.240587489890062 1.02985451723049 0.0478126792803289 -0.954373705684325 -1.25168969111387 -0.0617934506958671 -1.04336180473523 -1.38551863424458 4.12376310888797 -0.107326145184213 2.42376351314215 -0.353962500519281 -0.0257871177680481 0 0.148407094350999 -1.62142220585721 -0.311642550664522 0.861190363791153 0.389100710029888 0.230259170066739
Rv2295 2.89174845693256 -0.390784452255419 -0.179928011939378 -1.02923686134534 2.75991756865726 0.0246136350437057 -0.435693574460465 0 -0.432076165772334 -0.628960824367406 0 0.636062282025966 0.0833506193563619 0.149505260395034 0 -0.741604088442784 -0.402221552453525 0 -0.0902244331532485 -1.21438324364967 0.803016560976975 -0.288732689437107 -0.810915134281602 -0.362507221913305 -0.457695707837992 -0.896101014197186 -1.49812324967529 3.43973852673567 0.669923040271604 1.92450099071884 0.00522916273925868 -1.4331159712537 -0.643925607990475 -0.139456854814288 -0.0862113917855526 -0.00835885165484382 3.37852789293287 -0.348765370519865 -0.259523164777383
Rv2520c 1.64198936630865 0.129724505049626 -1.15075822040210 0.0536751172515563 2.96702179815887 0.536516685184406 -0.330776744140553 0 0.47831981953873 -0.963543205563245 0 0 0.340421452281246 0.18666096549943 0 -0.548991123895795 0.689550316792017 0 0.38991880294546 -0.0997432415088575 0 1.01842252221698 -0.6074367320539 -0.421754929871854 -0.477998921336648 -2.03208622075088 -1.47255174208697 2.72413080760144 0.760324877606323 2.67115518903587 -0.0844528734447617 -1.19536044582510 0.843966265374087 -0.214256398696224 0.392845624148639 -1.34421672198192 1.22605550973071 -0.785035131859944 -0.474162831254666
Rv2595 1.51162920167264 -0.202855011752156 0.315813168329941 0.0523001860786476 1.69216347440567 -0.356054100803125 0.252887982809532 0.512230615726667 -0.456485195539585 0.192557156387710 0 -0.172706318454635 -0.564589878794695 -0.118312898445521 0.181233544834034 -1.45362441464496 0.267503220561450 -0.626427287357549 -0.369333945068198 -0.455220887429911 -0.601926241363911 0.500593853002401 0.602821578018424 0.485151782050286 -0.0100589154159306 -0.610026526487371 -0.47039037492044 4.07123941924714 1.20168084550662 3.33007756800845 0.0848989876168518 0.0111401846534276 2.04613006042520 -0.448503534352638 -0.202759821980162 -0.174299207824773 0.991049102595221 -0.182691712223304 -0.367100792311697
Rv2596 0.621655726251644 -0.91349979514985 -0.220777540256183 -0.339022904884886 2.32528439024941 -0.00431938744872515 0.0550422653359987 1.55912153580393 -0.553867887093509 -0.484168010985604 1.11885245686987 0.82454951522049 0.754941168340573 -0.260247961624755 0.261858533712252 0.216765390844648 -0.105475470708419 -0.245965445381945 0.70016581815331 -0.193377793154719 -0.352150410674274 0.0799706883242828 -0.30647034087243 -0.133328469656101 0 -0.916320497981361 -1.53526511591533 5.64943885530404 1.73183488440501 1.066990920895 -0.0962527687525486 0.196631306727806 1.53748206039885 -0.472452528748192 0.325644103498725 0.242675818068565 -0.189658553068374 -0.217379349029375 -0.492859918772099
Rv2606c 2.28722746200117 0.0844035900038349 -0.83077229678857 -0.249535918322132 3.66776727180527 -0.360402926952608 -0.491869341211288 0.962845899987182 -0.84119635418702 -0.463217976787796 0.675169997693969 0.934859421826915 -0.251165567344858 -0.498509028512253 -0.195149043083432 0.126998330988404 0.540421252353412 0.973574748967358 0.276071222102963 -0.613335566555 0.187080496821827 0.683346998384606 0.436777854215807 0.0117632249792308 0 -1.39917497475460 -0.222632643383954 3.57726789779159 0.794329273940885 3.31446593545384 0.439335589567617 -0.821715176500157 1.03998743013006 -0.626861331868667 -0.236411552375255 -1.00092935127534 -0.302778418577154 -0.347604076908344 -1.06738360771822
Rv2607 2.12774675323327 0.193362983880616 -0.249140159715222 -0.253765103481761 3.76285900645349 -0.478833324278711 -1.09579591076538 -0.956143352369702 0.211531728540678 0.052436747466543 -0.580752625377262 -0.525866888735607 -0.666107617633495 0.520486233644268 -0.0772886268959266 -0.347464495996402 0 -0.692480915293039 0.085346475819665 0.144442079648556 -0.93932296609274 0.321328159223682 0.413428992110364 0.183618086675459 -0.121214181687942 0.390001431165995 0.638451287505673 4.34670475287646 0.21522573164003 1.17018787015979 0.294638342418812 -0.306165659879094 0.313733790982937 -0.0904395383700254 0.254531879358930 -0.539366468019629 0.529580890568489 -0.0105701648975581 -0.0674965939656746
Rv2729c 2.90955902591053 -0.452054812077105 0.886219644238924 -0.643722469908397 1.45861856627926 0.344593468605936 -0.421288425404402 1.19424518156027 -0.233771649292004 0.36165068965948 -0.104359976879887 0.993309232913935 0.244949782878453 -0.50143817810817 -0.742483348763416 -0.418901964497386 -0.769092001801135 0.113794941740154 -0.66087572262407 -0.573643988800594 -0.40051744706922 -1.15565371359104 0 0.0177957348938648 0.0225816829629362 0.255508022766414 -0.303092346442112 3.15371784672575 0.315432050303829 1.78828061390175 0.144504471524333 1.07027175543562 1.04398342092268 -0.346666278612111 -0.68022031830763 -0.040053755588143 1.17848839105799 -0.270191497968056 -0.350511790438111
Rv3033 1.73309670641758 -0.0438799535823603 -0.107223729298739 -0.55473509243799 2.27206402435437 0.700309773986272 0.189170122486185 0 -0.276891004877253 -0.190323723393668 0 1.33061263473885 0.807899401945972 -0.245941909448939 0 0.136023510592506 -0.219579019719453 -0.259664962166964 -0.0452271006848153 -0.991996687551254 0.645466716455033 0.0673010283731139 -0.595834510044658 -0.781980127969428 -1.54827465271601 1.28517479670152 -0.341074443581525 3.4228684022585 0.887176816388546 2.01912727038685 -0.157675930211086 -0.371195368966735 0.843876861503973 0.0151763531627962 -0.0538133742813585 0.245934410734417 -0.577060286046786 -0.434691456885185 -0.118874262678785
Rv3230c 1.33284202785062 0.433007781734775 0.757775737489119 -0.894052708755191 1.64557592045293 -0.305216676033675 -0.513203579025914 0.707192351144345 -0.682389134440892 -0.391327178581265 -0.7923919563679 0.207314692177977 -0.0259560850039778 -0.524121874133901 -0.33940039113009 0.175901798266336 0.051408842954089 0.300618696134131 -0.990359957508608 -0.642968460060066 0.49440915682705 0.0537264330340702 0.00751533577166256 -0.354197043817371 0.929321844917219 -0.637237707832255 0.277897549390664 2.29874072308847 0.490454601065755 0.669259928153567 -0.648009521267035 -0.544490966789323 1.10904802032342 -0.41970251791052 -0.793688427915004 0.621610751356788 0.457382132148533 -0.165065819653628 -0.801953824555223
Rv3651 0.991072194120248 0.266141033405842 -0.842120769116797 -0.74377825009201 2.55748396278089 -0.310854540261397 -0.234910539103901 0 0.163551201756231 -0.022896709000847 0 1.38497763392105 -0.492562096546389 0.509485015254759 0.056687747268309 -0.58108707175983 1.35939971307979 0 -0.071878345582423 -0.775003604368963 -0.145705675188939 1.04269283413885 0.147400222187856 0.256051129626335 -0.991829634685256 -1.57551120699009 -0.250114499167655 2.61058139796509 1.09742412119357 2.75593108706312 0.660657345496077 -0.588912648666961 0.801901394486824 -0.244867524615634 0.168617529898548 -1.07444244549589 -0.042781237173976 -0.75846442094045 -0.610404588838843
[+] Show/hide bicluster #95 motif PSSM #1. bicluster 95 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.4 0 0 0.6
2 0 0.3 0 0.7
3 0 0.1 0.9 0
4 0.1 0 0.8 0.1
5 0 0 0 1
6 0.4 0.3 0 0.3
7 0.8 0.2 0 0
8 0.5 0.5 0 0
9 0 0 0.3 0.7
10 0.1 0.2 0.3 0.4
11 0.7 0 0 0.3
12 0 0.6 0 0.4
13 0 0.4 0.5 0.1
14 0.7 0 0 0.3
15 0.9 0 0 0.1 [+] Show/hide bicluster #95 motif PSSM #2. bicluster 95 motif PSSM #2 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0.571429 0.428571 0 0
2 0 0.428571 0 0.571429
3 0 0.714286 0 0.285714
4 0.571429 0.142857 0 0.285714
5 0 1 0 0
6 0 0 0.857143 0.142857
7 0.714286 0.285714 0 0
8 0 0.428571 0.142857 0.428571
9 0.428571 0 0 0.571429
10 0 1 0 0
11 0 0 1 0
12 1 0 0 0
13 0 0.571429 0.142857 0.285714
14 0 0.571429 0.142857 0.285714
15 0 0 1 0
16 0 0.571429 0 0.428571
17 0.285714 0.285714 0.142857 0.285714
18 0.714286 0 0 0.285714
19 0 0.571429 0 0.428571
20 0 1 0 0
21 0.142857 0.142857 0.714286 0
22 0.142857 0.428571 0.285714 0.142857
23 0.142857 0 0.857143 0 |