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[+] Show/hide bicluster #164 rows and columns.
bicluster 164
Methanococcus maripaludis S2
14x38
[+] Show/hide bicluster #164 rows (genes).
bicluster 164 genes
Methanococcus maripaludis S2
14
[+] Show/hide bicluster #164 rows (short gene names).
bicluster 164 short names
Methanococcus maripaludis S2
14
short_name
[+] Show/hide bicluster #164 rows (long gene names).
bicluster 164 long names
Methanococcus maripaludis S2
14
long_name
[+] Show/hide bicluster #164 rows (NCBI RefSeq gene IDs).
bicluster 164 NCBI RefSeq IDs
Methanococcus maripaludis S2
28
[+] Show/hide bicluster #164 gene upstream sequences.
bicluster 164 upstream sequences
Methanococcus maripaludis S2
14
upstream
[+] Show/hide bicluster #164 columns (arrays; conditions).
bicluster 164 arrays
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #164 ratios.
bicluster 164 ratios
Methanococcus maripaludis S2
14x38
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_minus30m
MMP0924 -0.229567439603399 0.859026548193366 0.754081859285628 1.17005952611644 1.02337501123183 1.25766896301142 0.787409119789618 -3.70452542590951 -0.762756331585489 -0.140702624273051 0.14810802555058 -0.355459261321393 -0.333243057488806 0.436918675374212 0.407297070264096 0.710918522642785 0.348053860043864 -0.325837656211277 -0.177729630660696 -1.2515128159024 -1.07378318524171 -1.39962084145298 -1.39221544017545 -0.925675159691127 -0.866431949470895 -0.814594140528192 -1.06637778396418 -1.02935077757653 0.814594140528192 1.01453997502148 0.851621146915837 0.333243057488806 0.192540433215754 0.155513426828109 -0.459134879206799 -0.45172947792927 0.118486420440464 0.422107872819154
MMP0925 -0.0156307505056079 0.901373279156722 0.849990521429644 0.943626480230987 1.07325817654643 1.16501201062814 0.873595565028447 -2.84745367371959 -0.416820013482877 -0.29698425960655 -0.0364717511797517 -0.0677332521909676 0.0625230020224316 0.573127518538956 0.729435023595036 0.833640026965755 0.604389019550172 -0.234461257584119 -0.791958025617467 -1.38592654483057 -1.12541403640377 -1.1306242865723 -1.04205003370719 -0.781537525280395 -0.64607102089846 -0.427240513819949 -0.708594022920892 -1.18272678825766 1.03162953337012 0.573127518538956 1.10457303572963 0.734645273763571 0.56791726837042 0.411609763314341 -0.401189262977269 -0.416820013482877 0.458502014831165 0.932634780167938
MMP0926 -0.106027696883355 0.736303450578855 0.837307207648648 1.10896074627178 1.31110501846906 1.42769262039908 1.32466996639122 -2.65641967895343 -0.288630952626911 -0.55959062243993 -0.176712828138925 -0.0824659864648317 -0.0176712828138925 0.471234208370467 0.541919339626037 0.6302757536955 0.441782070347313 -0.318083090650065 -0.430001215138051 -1.32534621104194 -0.960139699554827 -0.983701409973351 -0.918906706322411 -0.795207726625163 -0.77164601620664 -0.365206511487112 -0.718632167764963 -0.948358844345565 0.98370140997335 0.530138484416776 1.00137269278724 0.671508746927916 0.706851312555701 0.524248056812145 -0.176712828138925 -0.170822400534294 0.565481050044561 0.742193878183486
MMP0927 -0.202948406467118 0.760299254078309 0.346128440589895 0.809071712131744 0.868341582608188 1.04186552345091 1.04669829447607 -2.47110524343072 -0.536147282756417 -0.705775801594606 -0.136308631209259 -0.287762665886213 -0.227181052015431 0.305937150047447 0.348344279756994 0.536147282756417 0.293820827273291 -0.481623830272714 -0.948102257077732 -1.5660347185597 -0.935985934303576 -1.17225422839962 -1.06320732343222 -0.984451225400201 -0.845113513497404 -0.766357415465387 -0.990509386787279 -1.25101032643164 0.960218579851889 0.596728896627199 0.948102257077732 0.572496251078886 0.457391184724401 0.378635086692385 -0.245355536176666 -0.2635300203379 0.384693248079463 0.56037992830473
MMP1666 -0.144001400122413 1.05157324963342 0.144330529238494 0.976116368337585 1.23314890362728 1.31132234592441 1.36348654575442 -4.06253727448063 -0.712746425815975 -0.785352173776856 -0.729687767006847 -0.654661827447271 -0.50945033152551 0.209346573287205 0.344877302814182 0.402961901182886 0.223867722879381 -0.628039719861615 -1.0612540160282 -1.40492122304303 -1.58643559294524 -1.70744517288004 -1.78489130403831 -1.70018459808395 -1.30085298429911 -0.10285814294458 -0.802293514967728 -1.22582704473953 0.957185777284273 0.429584008768542 0.947505010889489 0.574795504690303 0.50945033152551 0.347297494412878 -0.262590788458517 -0.325515770024613 0.453785924755502 0.577215696288999
MMP1667 -0.121105928354453 1.10937161952408 0.0564699482129737 0.906792996968334 1.22582178112311 1.30941640393165 1.32822519166965 -3.79547653331259 -0.798586757244776 -0.844071335862855 -0.879980213719232 -0.70282974962777 -0.580739564916086 0.127862291449764 0.326558082255053 0.463011818109288 0.211649673114645 -0.659739096200117 -1.17922086252238 -1.4664918853734 -1.56703674337126 -1.71546010517762 -1.84951991584143 -1.82558066393717 -1.41143160599362 -0.106742377211902 -0.925464792337311 -1.36594702737554 0.965736108098574 0.467799668490138 0.937009005813472 0.513284247108217 0.455830042538013 0.302618830350802 -0.259953589399113 -0.379649848920372 0.460617892918863 0.527647798250768
MMP1668 -0.186796361665745 1.05934849401043 0.171416750259037 0.989450193100582 1.23690568698282 1.27928673252699 1.34114117090078 -3.63600888661442 -0.964069812892336 -0.853747129492433 -0.813629790074286 -0.788556452937945 -0.693277771819847 0.159215690815769 0.29210437763838 0.44254440045643 0.216884366229355 -0.650653098688066 -1.23736918767846 -1.56582990416454 -1.60343990986905 -1.79148993839161 -1.88927595322334 -1.79399727210524 -1.4680438893328 -0.236943035938429 -0.96657714660597 -1.37527254192834 0.883835134056043 0.497705742156381 0.883835134056043 0.567911086138138 0.485169073588211 0.304641046206551 -0.284582376497478 -0.319685048488356 0.359802387906502 0.590477089560846
MMP1669 -0.251374911794961 1.06472410283834 0.18578136078362 0.947606036109339 1.27168559509975 1.32600259917787 1.33257927229949 -3.88117940021787 -0.851516062467748 -0.893631230936014 -0.877838042760414 -0.740963745238551 -0.651469012243486 0.148719188653563 0.288225684204694 0.422467783697291 0.267168099970561 -0.767285725531217 -1.28582873729674 -1.58589931263313 -1.57010612445753 -1.722773610155 -1.73593460030133 -1.6911872338038 -1.36479467817474 -0.15135138668283 -0.941010795462813 -1.446392817082 0.877838042760414 0.580399665453287 0.867309250643348 0.504065922604556 0.475111744282623 0.335605248731493 -0.29875447632176 -0.398778001433892 0.301386674351027 0.543548893043555
MMP1670 -0.252375859784564 1.13359985638039 0.21790290967629 0.958070125715523 1.28366143271224 1.33260296537121 1.2790443069897 -3.69448147635279 -0.991376996170302 -0.893773072496714 -0.72924074401838 -0.765493629954284 -0.595383934408887 0.241221125650439 0.411330821195835 0.547976314338859 0.3722892517264 -0.765493629954284 -1.22841509652044 -1.53517028520886 -1.48218529807177 -1.70806866428779 -1.7443215502237 -1.62440815828186 -1.27024534952341 -0.110152999574478 -1.04436198330739 -1.37900400733112 0.943969376100273 0.779437047621939 0.955124110234397 0.637214187411853 0.600961301475949 0.436428972997615 -0.341613732857558 -0.458738441265864 0.283051378653405 0.692987858082475
MMP1671 -0.339898818954639 1.03985994612394 0.262744693474887 0.847137819863888 1.20412965785852 1.22663132837712 1.10350079491247 -4.11294164622624 -0.769093090346513 -0.939042499823832 -0.852627545852314 -0.748929601086492 -0.630829163992083 0.216037384928796 0.377345299008963 0.535772714623413 0.368703803611811 -0.757571096483644 -1.17812387247837 -1.37111726968142 -1.42584674053005 -1.66204761471887 -1.7340600763618 -1.62460113466454 -1.27318032184704 -0.164188412545885 -1.08594792157541 -1.29910480803849 0.944803496755267 0.795017576537968 0.924640007495246 0.639470659389235 0.561697200814869 0.383106295940398 -0.339898818954639 -0.452238259117613 0.216037384928796 0.682678136374995
MMP1672 -0.311220019030309 1.06367105863076 0.402997064348531 1.14198227649356 1.70146401739204 1.69167123907118 1.63356126512291 -2.85545749271876 -0.869769519330118 -0.875907425926819 -0.759287200589497 -0.743942434097744 -0.615046395567019 0.296432734043109 0.428397725872184 0.535811091314455 0.434535632468885 -0.832942079749911 -1.19814752225363 -1.49276703889529 -1.50197389879034 -1.65235261040952 -1.71373167637653 -1.61552517082931 -1.19200961565693 -0.15777235411278 -1.0201482309493 -1.45593959931508 1.05446419873571 0.907154440414877 1.0114988525588 0.772120495287451 0.71381038261879 0.591052250684766 -0.277461532748453 -0.381805944892373 0.228915761479395 0.858051187641268
MMP1673 -0.289692934928416 1.29799823345151 0.0135727317319063 0.953418413595034 1.6663062617658 1.66760501902781 1.57000341294541 -4.24784459593349 -0.56149875994998 -0.488154330975907 -0.367351742077434 -0.587385028999653 -0.552870003600089 0.266861849639549 0.409236329412749 0.586125834585513 0.379035682188131 -0.479525574626016 -0.738388265122744 -1.113739166343 -0.94116403934518 -1.35534434413994 -1.38554499136456 -1.27768553699093 -0.445010549226452 0.0684004535920578 -1.01450846831925 -0.759960155997471 1.14268061915348 1.021878030255 1.15130937550337 0.901075441356532 0.961476735805768 0.590440212760459 -0.276749800403579 -0.388923632952161 0.387664438538022 0.97873424850555
MMP1675 -0.418383129044771 0.946867081522377 0.0857982623850293 1.04090357196027 1.55178926677088 1.67063292605906 1.53711136738493 -3.96265128766502 -0.0220201646865669 -0.311428043424303 -0.0975178721833678 -0.732956910281441 -0.588252970912573 0.103809347808101 0.229638860302769 0.30513656779957 0.154141152805968 -0.412091653420038 0.00943721343710011 -0.449840507168438 -0.588252970912573 -1.30548119213218 -1.31177266775691 -1.10415397214071 -0.607127397786773 -0.355468372797437 -0.858786422776109 -0.531629690289972 0.921701179023443 0.865077898400843 0.927992654648176 0.481297885292105 0.871369374025576 0.500172312166305 -0.217055909053302 -0.223347384678036 0.204472957803836 0.506463787791039
MMP1719 -0.615967411650319 0.789767345228002 0.15256384620539 1.02167465403957 1.03783199042343 1.03752423163517 0.788239618253041 -3.69211275995398 -0.442167478072636 -0.365491036788364 -0.273479307247237 -0.45750276632949 -0.334820460274655 0.278591069999522 0.396161613302072 0.508620393852338 0.19169110321068 -0.682420327430021 -0.932896702291977 -1.11692016137423 -1.38273182449304 -1.72010816614384 -1.633208199355 -1.27538480669506 -0.559738021375186 -0.631302699907173 -0.334820460274655 -1.08624958486052 1.49519060504331 0.518843919356908 1.4645200285296 0.769320294218863 0.692643852934591 0.426832189815781 -0.580185072384325 -0.605743886145749 0.140573475687832 0.85110849825542
[+] Show/hide bicluster #164 motif PSSM #1. bicluster 164 motif PSSM #1 Methanococcus maripaludis S2 14x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 1 0 0
4 0 0 0 1
5 1 0 0 0
6 0 1 0 0
7 1 0 0 0
8 0 0.666667 0 0.333333
9 1 0 0 0
10 1 0 0 0
11 1 0 0 0
12 0.333333 0.666667 0 0
13 1 0 0 0
14 0.333333 0.666667 0 0 [+] Show/hide bicluster #164 motif PSSM #2. bicluster 164 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 1 0 0 0
2 0 0 1 0
3 0 1 0 0
4 0.5 0 0 0.5
5 0 1 0 0
6 0 1 0 0 |