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[+] Show/hide bicluster #330 rows and columns.
bicluster 330
Desulfovibrio vulgaris Hildenborough
25x357
[+] Show/hide bicluster #330 rows (genes).
bicluster 330 genes
Desulfovibrio vulgaris Hildenborough
25
[+] Show/hide bicluster #330 rows (short gene names).
bicluster 330 short names
Desulfovibrio vulgaris Hildenborough
25
short_name
[+] Show/hide bicluster #330 rows (long gene names).
bicluster 330 long names
Desulfovibrio vulgaris Hildenborough
25
long_name
[+] Show/hide bicluster #330 rows (NCBI RefSeq gene IDs).
bicluster 330 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #330 gene upstream sequences.
bicluster 330 upstream sequences
Desulfovibrio vulgaris Hildenborough
25
upstream
[+] Show/hide bicluster #330 columns (arrays; conditions).
bicluster 330 arrays
Desulfovibrio vulgaris Hildenborough
357
[+] Show/hide bicluster #330 ratios.
bicluster 330 ratios
Desulfovibrio vulgaris Hildenborough
25x357
GENES X111.11 X111.13 X111.2 X111.4 X111.5 X111.6 X111.7 X113.1 X116.11 X116.4 X116.7 X116.8 X116.9 X121.12 X121.2 X121.3 X121.5 X121.9 X123.15 X123.4 X123.5 X123.7 X1258.100 X1258.106 X1258.115 X1258.116 X1258.117 X1258.118 X1258.16 X1258.20 X1258.23 X1258.30 X1258.36 X1258.39 X1258.46 X1258.47 X1258.52 X1258.59 X1258.66 X1258.69 X1258.78 X1258.79 X1258.8 X1258.80 X1258.85 X1258.87 X1258.88 X1258.89 X1258.95 X126.11 X126.13 X126.15 X126.6 X126.8 X127.1 X1271.10 X1271.2 X1271.4 X1271.5 X1271.9 X129.1 X129.3 X129.4 X130.1 X1305.1 X1305.3 X1311.1 X14.1 X14.10 X14.12 X14.8 X1413.1 X1413.11 X1413.13 X1413.15 X1413.2 X1413.5 X1413.7 X1414.1 X1414.10 X1414.11 X1414.2 X1414.5 X1414.6 X1414.7 X1414.8 X1414.9 X1416.4 X1416.7 X1416.8 X1417.10 X1417.13 X1417.14 X1417.2 X1417.4 X1417.6 X1417.8 X1417.9 X15.1 X15.2 X16.10 X16.11 X16.12 X16.13 X16.14 X16.15 X16.16 X16.17 X16.18 X16.19 X16.2 X16.20 X16.5 X16.6 X16.8 X16.9 X1709.12 X1709.15 X1709.2 X1709.3 X1709.4 X1709.6 X1709.7 X1709.8 X1713.1 X1713.3 X1713.4 X1713.5 X1715.5 X1718.3 X1721.1 X1721.12 X1721.14 X1721.16 X1721.17 X1721.18 X1721.4 X1721.6 X1731.1 X1736.17 X1738.1 X175.1 X1755.1 X1755.10 X1755.101 X1755.102 X1755.103 X1755.104 X1755.106 X1755.107 X1755.108 X1755.113 X1755.114 X1755.118 X1755.12 X1755.120 X1755.122 X1755.123 X1755.125 X1755.127 X1755.129 X1755.130 X1755.131 X1755.133 X1755.134 X1755.136 X1755.14 X1755.17 X1755.18 X1755.19 X1755.2 X1755.20 X1755.21 X1755.23 X1755.26 X1755.27 X1755.28 X1755.30 X1755.32 X1755.33 X1755.36 X1755.38 X1755.39 X1755.40 X1755.41 X1755.42 X1755.43 X1755.44 X1755.45 X1755.46 X1755.49 X1755.5 X1755.51 X1755.52 X1755.53 X1755.54 X1755.56 X1755.58 X1755.59 X1755.60 X1755.64 X1755.65 X1755.66 X1755.68 X1755.7 X1755.70 X1755.71 X1755.72 X1755.73 X1755.74 X1755.75 X1755.76 X1755.77 X1755.78 X1755.79 X1755.80 X1755.81 X1755.83 X1755.84 X1755.85 X1755.87 X1755.89 X1755.9 X1755.90 X1755.93 X1755.96 X1755.98 X1755.99 X177.1 X177.2 X177.3 X177.5 X177.6 X177.7 X178.4 X179.1 X19.1 X193.2 X193.3 X194.3 X195.1 X199.1 X23.1 X23.2 X23.3 X23.4 X23.5 X23.6 X23.8 X24.1 X24.2 X24.3 X24.4 X24.5 X24.6 X24.7 X24.8 X24.9 X25.1 X27.1 X27.10 X27.12 X27.13 X27.14 X27.15 X27.2 X27.3 X27.4 X27.6 X28.2 X28.3 X3.1 X3.2 X3.3 X3.4 X30.3 X30.4 X31.1 X31.2 X32.2 X33.1 X37.5 X37.6 X37.7 X37.9 X38.1 X38.3 X38.5 X380.1 X41.1 X41.4 X41.7 X42.1 X42.3 X42.5 X426.1 X435.1 X435.4 X435.5 X435.6 X435.7 X440.1 X449.1 X450.2 X450.3 X450.5 X56.1 X56.4 X57.2 X57.3 X57.4 X59.1 X59.3 X59.4 X59.5 X59.7 X59.8 X59.9 X6.11 X6.12 X6.13 X6.15 X6.16 X6.3 X6.4 X6.6 X6.7 X6.8 X6.9 X60.1 X60.2 X60.3 X65.2 X65.3 X71.1 X71.2 X71.3 X71.4 X71.6 X71.7 X71.8 X72.2 X72.7 X73.1 X73.2 X73.3 X73.4 X73.5 X74.1 X74.4 X74.5 X86.1 X86.4 X86.5 X86.6 X86.7 X88.1
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DVU0528 -0.569757540307297 0.150084600711818 -0.272702284150378 -1.09437915760959 -0.997501647058714 -0.709364009713081 -0.828467601953506 0.0787609247451028 -0.433700843902449 -0.79116171074662 -0.688357056285922 -0.505608172214991 -0.65066178032624 -1.96148378024672 -2.18055872189205 -2.43711371592461 -2.30571406116319 -1.89639280902493 0.134047187891514 0.517098845472748 1.56695093623625 1.33577108458494 0.871688176758123 -0.906211453724308 -0.85936917593533 -0.0125393217956483 -0.55949902200184 0.913513762986545 -0.563428268143682 0.0749094139593643 -1.49570881867594 0.349840394840286 0.820903909326302 -0.563531632096242 -0.897909770794715 0.203518100407202 0.572060149343644 -0.94632091515132 0.185381266594282 -1.23823487662679 1.54343209716743 -0.604306587464394 -0.297876362404723 -1.50777266628981 -0.823719939858517 0.772955778839385 -0.0297093486659921 -1.19745850531408 -1.08235495644328 NA -0.934966455759813 1.71187286150383 NA 0.277598903612618 0.94024538025207 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DVU0711 0.237968282757322 0.116166125081718 0.793189767375698 0.641229454505692 -0.119922532760812 0.0814195828673028 0.285287840388641 -0.87674867063732 -0.0486857167482489 -0.717459784413213 -0.791268987479516 -0.67787521159873 -0.376093424532615 -0.42875831254046 -0.16885569323252 0.471238346238404 0.681626529098697 0.431030748344738 -0.303547934706819 -0.510498239488425 -0.0499361023904133 -0.270628766798751 -0.397876822017658 -1.65966960377620 -0.357951833438261 0.0442381526649472 -1.02461757138939 0.486956883609853 -0.645887369839955 -0.295092135565124 0.244755241783567 -0.529245192579821 -0.85459755989678 -0.0497768135041892 -0.441949423430894 -0.647966796328466 -0.294583117652493 -0.122533457448316 -0.0163063968598228 0.641353096080685 -0.521884504530917 0.167632765654412 0.170684946248513 -1.49073988617216 -1.21555388360736 1.78206223828781 0.216734046553415 -1.35984681309309 -1.34875439750805 -0.143698647058396 0.319507653436241 -3.43277007590569 1.03666250882230 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-0.34754074344061 -0.537265101863384
DVU3380 0.363925547332927 -0.481337316595977 -0.187150779152954 -0.327700468539152 0.167737241674234 0.200250065771801 -0.125652158808480 0.693716433128988 0.358158156683724 -0.306618786909745 -0.115981773913782 -0.615941003731906 0.438365790969382 -1.74389641781308 -0.365690715069378 -1.50452379616356 -1.40974939352438 -1.16867885912399 1.68474069655665 0.591912230684927 -0.52271236322046 0.776359579925465 1.09308756294734 -1.12249342721897 -1.07806103510219 0.237947036463242 -1.09778548907165 1.3977493400306 -0.712178477942775 -0.82897172184658 -1.92786636691003 -0.0478948110796546 1.19441877541080 -0.290942862564423 -0.474184032227398 0.882958732079598 0.653589462630465 -0.390968666783065 0.496659325361411 -0.464719822452448 1.04948097385029 0.0702266636624414 0.0439751464180607 -1.06335314153301 0.35273145112544 0.688479364579243 -0.415006260156023 -1.11548126806605 -0.149515550743362 0.498723281640384 0.728099166334 -0.524162204303179 -1.02454811739051 -0.58031570710467 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[+] Show/hide bicluster #330 motif PSSM #1. bicluster 330 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 19x4
POSITION A C G T
1 0.444444 0 0 0.555556
2 0.444444 0.555556 0 0
3 0 0 0.777778 0.222222
4 0.555556 0.333333 0.111111 0
5 0.444444 0 0.111111 0.444444
6 0.666667 0 0 0.333333
7 0 0.222222 0 0.777778
8 0.666667 0 0.222222 0.111111
9 0.444444 0.222222 0 0.333333
10 0.444444 0.555556 0 0
11 0 0.666667 0.333333 0
12 0 0 0.111111 0.888889
13 0.222222 0.777778 0 0
14 0 0 0.666667 0.333333
15 0.333333 0.555556 0 0.111111
16 0 0.777778 0 0.222222
17 0.111111 0.111111 0.222222 0.555556
18 0.333333 0.222222 0.111111 0.333333
19 0 0 0 1 [+] Show/hide bicluster #330 motif PSSM #2. bicluster 330 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 8x4
POSITION A C G T
1 0.0625 0 0.875 0.0625
2 0.1875 0.5625 0.25 0
3 1 0 0 0
4 0 0.125 0.875 0
5 0 0.0625 0.9375 0
6 0.1875 0.8125 0 0
7 0.875 0 0 0.125
8 0.5625 0 0 0.4375 |