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[+] Show/hide bicluster #326 rows and columns.
bicluster 326
Desulfovibrio vulgaris Hildenborough
19x364
[+] Show/hide bicluster #326 rows (genes).
bicluster 326 genes
Desulfovibrio vulgaris Hildenborough
19
[+] Show/hide bicluster #326 rows (short gene names).
bicluster 326 short names
Desulfovibrio vulgaris Hildenborough
19
short_name
[+] Show/hide bicluster #326 rows (long gene names).
bicluster 326 long names
Desulfovibrio vulgaris Hildenborough
19
long_name
[+] Show/hide bicluster #326 rows (NCBI RefSeq gene IDs).
bicluster 326 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #326 gene upstream sequences.
bicluster 326 upstream sequences
Desulfovibrio vulgaris Hildenborough
19
upstream
[+] Show/hide bicluster #326 columns (arrays; conditions).
bicluster 326 arrays
Desulfovibrio vulgaris Hildenborough
364
[+] Show/hide bicluster #326 ratios.
bicluster 326 ratios
Desulfovibrio vulgaris Hildenborough
19x364
GENES X111.1 X111.10 X111.11 X111.12 X111.4 X111.6 X111.7 X116.1 X116.10 X116.11 X116.4 X116.6 X116.7 X116.8 X116.9 X121.10 X121.11 X121.12 X121.13 X121.15 X121.16 X121.2 X121.3 X121.4 X121.5 X121.6 X121.7 X121.8 X121.9 X123.1 X123.11 X123.13 X123.15 X123.3 X123.4 X123.5 X123.6 X123.7 X1258.1 X1258.100 X1258.102 X1258.103 X1258.104 X1258.105 X1258.106 X1258.107 X1258.108 X1258.109 X1258.11 X1258.110 X1258.111 X1258.112 X1258.113 X1258.114 X1258.115 X1258.116 X1258.117 X1258.118 X1258.119 X1258.12 X1258.120 X1258.14 X1258.15 X1258.16 X1258.17 X1258.18 X1258.19 X1258.2 X1258.20 X1258.21 X1258.22 X1258.23 X1258.24 X1258.25 X1258.27 X1258.29 X1258.3 X1258.31 X1258.32 X1258.33 X1258.34 X1258.35 X1258.36 X1258.38 X1258.39 X1258.40 X1258.41 X1258.42 X1258.46 X1258.48 X1258.5 X1258.50 X1258.51 X1258.53 X1258.54 X1258.55 X1258.56 X1258.57 X1258.58 X1258.59 X1258.6 X1258.60 X1258.61 X1258.62 X1258.64 X1258.67 X1258.69 X1258.7 X1258.70 X1258.71 X1258.72 X1258.74 X1258.76 X1258.78 X1258.79 X1258.8 X1258.80 X1258.81 X1258.82 X1258.83 X1258.84 X1258.85 X1258.87 X1258.89 X1258.9 X1258.90 X1258.91 X1258.92 X1258.93 X1258.94 X1258.96 X1258.97 X1258.98 X126.11 X126.13 X126.15 X126.2 X126.3 X126.4 X126.8 X126.9 X127.1 X1271.10 X1271.3 X129.1 X1301.1 X1305.1 X1305.2 X1305.3 X1305.4 X1310.2 X14.10 X14.11 X14.12 X14.13 X1413.15 X1413.2 X1413.7 X1414.10 X1414.4 X1414.5 X1414.8 X1415.3 X1416.2 X1416.4 X1416.6 X1417.11 X1417.12 X1417.2 X1417.3 X1417.4 X1417.5 X1417.7 X1417.8 X1417.9 X15.2 X16.11 X16.15 X16.16 X16.19 X16.4 X16.6 X16.7 X16.8 X16.9 X17.1 X1709.15 X1709.3 X1709.7 X1713.1 X1713.4 X1715.4 X1715.5 X1718.1 X1718.2 X1719.1 X1721.10 X1721.11 X1721.13 X1721.16 X1721.19 X1721.5 X1736.10 X1736.17 X1738.1 X175.1 X175.2 X175.3 X175.4 X175.5 X175.7 X1754.1 X1755.1 X1755.10 X1755.101 X1755.102 X1755.103 X1755.104 X1755.106 X1755.108 X1755.11 X1755.110 X1755.115 X1755.119 X1755.121 X1755.124 X1755.128 X1755.13 X1755.131 X1755.134 X1755.135 X1755.14 X1755.15 X1755.17 X1755.18 X1755.19 X1755.2 X1755.20 X1755.21 X1755.23 X1755.30 X1755.31 X1755.35 X1755.36 X1755.39 X1755.43 X1755.44 X1755.49 X1755.51 X1755.52 X1755.56 X1755.58 X1755.61 X1755.63 X1755.64 X1755.65 X1755.68 X1755.7 X1755.71 X1755.72 X1755.74 X1755.75 X1755.76 X1755.79 X1755.8 X1755.82 X1755.85 X1755.86 X1755.87 X1755.89 X1755.9 X1755.92 X1755.94 X1755.95 X1755.97 X1755.99 X177.2 X177.4 X177.8 X178.4 X19.1 X193.1 X193.3 X194.1 X20.1 X20.2 X22.2 X22.3 X23.4 X23.6 X23.7 X23.8 X23.9 X24.1 X24.2 X24.3 X24.4 X24.6 X24.7 X24.9 X25.2 X25.3 X27.1 X27.11 X27.12 X27.2 X28.1 X28.2 X3.1 X30.1 X31.2 X31.3 X32.1 X32.2 X37.2 X37.3 X37.6 X37.7 X37.9 X38.3 X38.7 X380.1 X388.1 X41.2 X41.3 X41.4 X426.1 X450.1 X450.2 X450.5 X451.2 X57.3 X59.1 X59.2 X59.3 X59.4 X59.7 X59.8 X59.9 X6.12 X6.13 X6.3 X6.4 X6.8 X65.2 X65.3 X71.1 X71.2 X71.7 X71.8 X72.6 X72.7 X73.1 X73.3 X75.1 X75.2 X75.3 X86.10 X86.3 X86.4 X86.6 X86.7 X86.8 X86.9
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DVU0488 -1.04351448919380 0.568358468823161 -0.0344856914312948 -0.150745563205306 0.206206376000050 -0.771608008807251 0.285434938404645 -0.840932549195357 0.588619433347286 -0.0226391705211305 0.422728871434743 -0.615149275207663 0.476778186428649 -0.194247612719234 0.116276723789094 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.43880927628378 0.438028188344429 0.181790829630282 -0.636875003873366 1.37379565117318 NA 2.92669860215813 2.49455704311948 -3.27620411893328 NA 0.281875416991519 -0.24384481565124 NA -0.498439133009209 NA -1.41333972969935 NA -1.66990232387257 NA NA NA NA NA -1.00706041253544 NA NA NA NA NA NA NA NA -0.0663427455621026 NA -0.603961175415744 0.334550311026922 0.648372414632616 -0.434389429936867 NA 2.52518940506054 0.428539744970081 0.173993610643084 -0.630478706511707 NA -0.226270055103856 NA -0.373021112538169 1.5805731285936 1.36081032432597 -1.60387952568188 NA NA NA NA NA NA -0.66261558359489 NA NA NA NA 0.00633815465726888 NA -0.369282109334669 -0.59759981075154 1.80301009108022 -1.02819228534440 -1.25502233567999 0.252896937588612 NA -0.327309871054132 -0.524179712730733 2.05328479971147 0.693830695204045 0.461529461701485 -0.899364110856253 NA 0.138953705943781 -0.598787522465023 1.06509540375992 NA 0.634988373204105 -1.28996707889312 NA NA -0.462672869117989 -0.838428236160538 -0.596347051946243 -1.07320969118243 NA NA NA NA NA NA NA NA -0.274938530113859 0.556059750167315 -0.172714616177423 0.111071149580354 0.792178284298707 0.139306646645657 -0.528635438519957 -0.0675565965698887 0.394284019099862 -0.387485658436249 -0.102562291317201 -0.00330834327266468 0.33254951066577 -0.523196778898885 NA NA -1.13858442760653 -0.330014143667489 1.88296983097983 -0.976596691202794 0.718095669602023 0.498515960852096 -3.37868942581275 -4.65143214320548 -3.63302355480346 2.08361601770894 -3.10721418355341 -0.188330736515756 -1.38767021994852 0.38033141790587 -1.40626886990407 -1.06359476735178 2.71872859472113 -1.39481335429026 NA 0.844786926666523 0.832618302194304 0.217708870069067 0.261220556189189 0.053550126747269 -0.0131719276804105 -0.544763503562378 -0.157412890116188 0.493601291692855 0.545528144172403 0.00740200249394508 0.0958880742328903 -0.377891212393760 -0.207871364726835 -0.274784344414745 NA NA -0.916760594189037 -0.299847952551099 NA -2.05875142958202 NA NA -2.41028277780292 -2.58451261780110 -3.15875798093672 0.271066758568512 0.159090599163151 2.19707500989249 NA NA NA NA NA NA 4.59734883508322 0.267430144305828 -1.59826620257354 NA NA NA NA NA NA NA NA 1.88358416462474 0.777257204182159 1.98569605301416 NA -0.790129565913253 0.097517503882818 -1.23851964757175 NA 1.35475130818113 -1.19955162127238 NA NA NA NA NA NA NA NA NA -0.0125063995650966 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.41167741513079 NA NA NA NA NA NA NA NA NA NA -0.333611006929620 -0.297865220826562 -0.76968550587143 -0.78927070338616 -0.600222172212243 0.465680429819805 0.545584759233796 NA 1.0715796351531 NA NA NA NA NA -1.83619400951796 NA NA NA NA NA -0.642605170831824 -0.300973026324318 -0.0359510578607597 -0.124660474812325 -0.776110713051673 0.0190713134436455 -0.49399304382618 -0.368412405625607 NA NA NA 0.484493494263193 -0.0687696043746327 -0.638636093655427 0.115531091384788 -0.662803497415684 0.083038623533024 NA -0.0348717579669656 1.15785978414059 0.262139647504998 0.809903616817881 0.485546293489952 -0.334877016068434 -0.865457711960588 -0.206935409350186 -1.57860752593657 -0.393185711000349 -0.119731350743793 0.932216240942714 -0.903289823304774 -0.0163138226725791 0.445774815149105 0.195000207571516 0.529592811253874 0.484882572238300 0.143664801797161 0.0270719852791264 NA 0.221251527421353 1.54845913845013 NA NA -0.290837725759158 -0.716656466558376 0.228922265952247 0.106149855254354 -0.240010650961567 0.478209222448546 -0.00991656165030055 -0.344561805293997 NA -0.296436593958214 -0.0562706852250946 1.61905932458324 1.32550420838055 -0.521075520960301 0.177471220903557 0.48489943629914 -0.186859949495306 -0.728899774728603 -0.80664670893078 -0.686142153043207
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1.70180929775316 0.783552376566451 -0.639254319132672 -0.169241279895551 -0.177306819753409 0.613964316344323 0.216675747214337 -0.450513108996636 0.137396772348439 0.0360038656672333 -0.257814234953557 -0.211858709953001 0.0158032430445119 1.45510718817437 1.69706669791411 0.714169567266963 0.351013007786908 0.22641278607562 1.47042034771108 -0.625490082005805 -1.69857684154707 -0.441315407147124 0.0912199408798297 -0.309133265956302 -0.119084052133453 -1.46946781614566 0.0282068799825918 0.410262075794967 -0.2669296990521 -0.107556057806633 -1.67831158762955 -0.871006541624832 0.228806372648524 -0.563987833341129 0.0246626334957301 -1.91734040244995 -1.76400822720246 -2.73610524562215 -2.57376926240954 -1.60878837241377 0.438066904550602 -2.08263382456595 -2.89142093302037 -2.68366475022137 -1.2191686407115 -1.82388577883581 -0.51701425401422 1.03221571164259 -1.36339226072299 -0.378841460395124 0.310990635648908 0.735310686662278 -1.45851392600988 0.065375891888479 0.0449931873076511 -0.797387039517996 0.826492071631762 -0.187306172524963 0.372118468536817 -0.306701792072654 -0.305723407989316 0.209102742396154 1.21890654966776 0.721466217583246 0.481543707962346 -0.083173144097463 -0.291239980557908 0.160970257093538 -0.680654006449494 -2.3116336453658 -1.05899669154200 -1.04464185810059 -1.5740657664493 -1.49199962271182 -0.460671365606782 -0.652343270662156 0.0821829258011808 -0.0567939034118691 -0.218946757193657 -0.475429587474353 0.585892047748141 -0.768648399985782 0.288354081811862 -0.209204815268630 -0.467627030126366 0.497641357697995 NA NA 0.352263289041470 0.228443100198447 -0.917594561848284 -0.38089406117133 -0.807411576207869 -0.772000312653983 -0.106164479169649 -0.392411803637595 0.292252017487848 0.52041608878599 0.126637667563195 -0.588641329308974 -1.12464648640050 -1.02917937798624 0.213979062155479 2.46985640383078 0.298405362485789 0.0975128003279229 1.96122148575399 -0.517968122778841 -0.272648454309150 -0.598133214983088 -0.109743492835782 -0.423104982671147 -0.359550133230266 -0.454930323696353 -0.209237576649097 NA 0.0521663695642146 NA NA NA -0.258177730270169 0.160622585300826 0.0302282794440667 -0.989493534314261 -1.08309079251003 0.169637536592629 0.242441347185794 0.0583034453051886 NA 0.416838867207109 0.140651738074442 1.35998106555680 0.98043935851251 -2.12724501863468 -0.0812344058333708 1.23021702625760 0.0718096029859274 -0.327354833758969 -2.01640903405026 -0.393314413099444
[+] Show/hide bicluster #326 motif PSSM #1. bicluster 326 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 10x4
POSITION A C G T
1 0.714286 0.285714 0 0
2 0 1 0 0
3 0 1 0 0
4 0.142857 0 0 0.857143
5 0 1 0 0
6 0 1 0 0
7 1 0 0 0
8 0 0.285714 0 0.714286
9 0.142857 0.142857 0.714286 0
10 0.571429 0 0 0.428571 [+] Show/hide bicluster #326 motif PSSM #2. bicluster 326 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 19x4
POSITION A C G T
1 1 0 0 0
2 0 0.875 0.125 0
3 0 1 0 0
4 0 0 0.5 0.5
5 0 0.375 0.625 0
6 0 0.125 0.5 0.375
7 0.75 0 0 0.25
8 0.375 0 0.625 0
9 0 0.5 0 0.5
10 0.5 0.25 0.25 0
11 0 0.875 0.125 0
12 0.5 0.125 0 0.375
13 0.25 0.25 0 0.5
14 0 0.75 0 0.25
15 0.125 0.875 0 0
16 0 0.375 0.125 0.5
17 0.125 0.625 0 0.25
18 0.625 0 0 0.375
19 0.375 0 0 0.625 |