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[+] Show/hide bicluster #321 rows and columns.
bicluster 321
Desulfovibrio vulgaris Hildenborough
32x367
[+] Show/hide bicluster #321 rows (genes).
bicluster 321 genes
Desulfovibrio vulgaris Hildenborough
32
[+] Show/hide bicluster #321 rows (short gene names).
bicluster 321 short names
Desulfovibrio vulgaris Hildenborough
32
short_name
[+] Show/hide bicluster #321 rows (long gene names).
bicluster 321 long names
Desulfovibrio vulgaris Hildenborough
32
long_name
[+] Show/hide bicluster #321 rows (NCBI RefSeq gene IDs).
bicluster 321 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #321 gene upstream sequences.
bicluster 321 upstream sequences
Desulfovibrio vulgaris Hildenborough
32
upstream
[+] Show/hide bicluster #321 columns (arrays; conditions).
bicluster 321 arrays
Desulfovibrio vulgaris Hildenborough
367
[+] Show/hide bicluster #321 ratios.
bicluster 321 ratios
Desulfovibrio vulgaris Hildenborough
32x367
GENES X111.1 X111.10 X111.11 X111.3 X111.4 X111.7 X111.8 X113.1 X115.1 X115.2 X115.3 X116.1 X116.10 X116.11 X116.3 X116.4 X116.8 X121.1 X121.13 X121.15 X123.11 X123.13 X123.14 X123.15 X123.6 X1258.10 X1258.100 X1258.101 X1258.105 X1258.106 X1258.108 X1258.11 X1258.110 X1258.111 X1258.112 X1258.113 X1258.115 X1258.116 X1258.117 X1258.118 X1258.12 X1258.120 X1258.13 X1258.15 X1258.16 X1258.17 X1258.18 X1258.21 X1258.24 X1258.25 X1258.26 X1258.27 X1258.28 X1258.29 X1258.3 X1258.34 X1258.37 X1258.40 X1258.41 X1258.42 X1258.43 X1258.45 X1258.46 X1258.49 X1258.5 X1258.50 X1258.51 X1258.53 X1258.54 X1258.55 X1258.56 X1258.57 X1258.59 X1258.6 X1258.61 X1258.63 X1258.65 X1258.67 X1258.69 X1258.7 X1258.71 X1258.73 X1258.74 X1258.75 X1258.76 X1258.78 X1258.79 X1258.8 X1258.80 X1258.84 X1258.85 X1258.86 X1258.87 X1258.88 X1258.89 X1258.90 X1258.91 X1258.92 X1258.95 X1258.97 X1258.99 X126.1 X126.10 X126.11 X126.12 X126.13 X126.15 X126.4 X126.5 X126.7 X126.9 X127.1 X1271.1 X1271.5 X1271.7 X1271.9 X129.2 X129.3 X130.1 X1305.3 X1310.1 X1310.2 X132.1 X132.2 X14.10 X14.11 X14.12 X14.2 X14.4 X14.5 X14.8 X14.9 X1413.10 X1413.12 X1413.14 X1413.15 X1413.16 X1413.17 X1413.2 X1413.4 X1413.7 X1414.10 X1414.11 X1414.2 X1414.3 X1414.4 X1414.5 X1414.6 X1414.7 X1414.8 X1414.9 X1415.2 X1415.3 X1416.1 X1416.3 X1416.5 X1416.7 X1417.1 X1417.10 X1417.12 X1417.13 X1417.2 X1417.3 X1417.4 X1417.7 X1417.8 X1417.9 X15.2 X16.1 X16.10 X16.11 X16.12 X16.13 X16.14 X16.15 X16.16 X16.17 X16.19 X16.2 X16.20 X16.3 X16.7 X16.9 X17.1 X1709.13 X1709.14 X1709.3 X1709.4 X1709.5 X1709.6 X1713.1 X1713.3 X1718.3 X1719.1 X1721.10 X1721.11 X1721.12 X1721.13 X1721.15 X1721.17 X1721.2 X1721.3 X1721.4 X1721.5 X1721.8 X1721.9 X1731.1 X1736.10 X1736.17 X1736.19 X1736.21 X1736.5 X1737.1 X1738.1 X175.2 X175.3 X175.4 X175.6 X175.7 X175.9 X1755.1 X1755.100 X1755.105 X1755.107 X1755.108 X1755.12 X1755.120 X1755.128 X1755.131 X1755.132 X1755.133 X1755.135 X1755.14 X1755.15 X1755.16 X1755.18 X1755.20 X1755.23 X1755.29 X1755.34 X1755.4 X1755.5 X1755.58 X1755.6 X1755.65 X1755.67 X1755.7 X1755.70 X1755.71 X1755.72 X1755.75 X1755.8 X1755.80 X1755.83 X1755.95 X1755.96 X1755.97 X1755.99 X178.5 X179.1 X19.1 X193.1 X194.1 X195.1 X20.1 X22.3 X23.3 X23.7 X24.10 X24.2 X24.4 X24.5 X24.7 X25.2 X25.3 X26.1 X27.1 X27.10 X27.11 X27.12 X27.13 X27.14 X27.15 X27.16 X27.2 X27.3 X27.4 X27.5 X27.6 X27.7 X27.8 X27.9 X3.1 X3.2 X3.3 X3.4 X3.5 X30.1 X30.2 X31.1 X31.2 X32.1 X32.2 X32.3 X33.3 X33.4 X33.5 X386.1 X388.1 X389.1 X41.7 X426.1 X435.1 X435.10 X435.11 X435.2 X435.4 X435.6 X435.7 X440.1 X450.1 X450.4 X450.5 X451.1 X451.3 X56.1 X56.3 X57.1 X57.2 X57.3 X59.5 X59.9 X6.11 X6.12 X6.13 X6.16 X6.3 X6.4 X6.5 X6.6 X6.7 X6.8 X65.1 X65.2 X65.4 X71.1 X71.5 X72.1 X72.3 X72.6 X72.9 X73.2 X73.3 X73.4 X74.1 X74.2 X74.3 X75.1 X75.2 X75.3 X86.1 X86.10 X86.4 X86.7 X86.8 X86.9 X88.1
DVU0330 -0.251586910928413 -0.0572295032389039 1.65980837575719 -1.13293331955818 0.373351486969862 0.157502674534801 -0.156985023716827 2.02200862485258 2.11905756298492 1.72676691855125 2.04352798782562 -0.245138162194958 -0.0566035495902197 1.66466576477473 -1.14886103703428 0.386191091137436 -0.161849472892819 0.00331474439496092 -0.202716494097914 0.678114522964581 0.280990494052123 0.355595188453725 -0.930504456315748 -2.48698981352734 -0.841981365534538 -0.524165508586883 -0.796293668135877 -0.0580674028444288 -0.415252680185551 0.82335610271567 -0.39628344644672 0.310308508055349 0.307248635380640 0.924463219928357 0.322340430095588 -1.02340625737120 0.607761455985014 -0.0423531845600236 0.389037747026783 -0.586440342261414 -0.65400464665097 0.470711072074253 -0.0361883953996573 -0.199824653194450 0.247265529140835 -0.0919859573005719 -0.569740243450252 0.273645105194791 -0.205821551786740 0.628667997204095 -0.351300352861941 0.173059592488813 -0.37666044203489 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DVU0331 -0.863434438502955 0.569254124534482 0.568382420584243 -0.0939362506157671 0.43912345218212 -0.232089916296441 -0.112469844176962 1.19961416526295 NA 1.40171149509616 0.485578506078196 -0.868603629659928 0.56528833593895 0.553195931368966 -0.0910640060016459 0.459676824926647 -0.115302948354961 -0.278893917131502 -0.302246826154574 0.465984405717266 0.138095021366213 0.149465649758221 -0.0259995720456873 -1.09448905709411 -0.502535735159514 -0.341896751343228 -0.733103420189427 0.324935541878576 -0.412413222495904 1.02388820181475 -0.0912209657844667 0.833754577490369 0.255700754159584 1.57415496908791 0.933936845634516 -2.07458282591296 0.508766892590112 -0.430217477150788 0.713064047612819 -0.975093478594694 -0.77995253203561 1.09889985254643 -0.221142535332327 0 0.513783502385933 0.915873866062895 -0.134166913732914 0.445501353078314 0.149351545435968 1.29418143931667 -0.296637139241924 0.258962014904923 -0.679240872907985 0.411471729157868 0.441376349149405 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-1.01964087917941 NA 1.25734183593364 -0.588679995750377 0.0338607306313652 0.605207288588314 0.380751456558892 0.155883941144265 0.352884919847175 -2.05710487886852 -1.16278423099149 -1.91619580696021 0.997596773841723 1.18934209201080 -0.571401685988832 -0.103352849605763 0.995646790565186 2.47804594636042 -2.44403987819045 -0.824097649656784 1.24649300374184 1.46420772536013 0.923845490460226 0.210584252396845 0.382524665650547 1.69196030481689 -1.29913544479268 -0.829127513061685
DVU3248 -0.00687803336971771 0.63303640687081 0.843427678501537 0.212067499318848 1.08637945403100 0.508980844979575 0.688630416088104 1.11829679094219 1.30209401844097 1.21821047041869 0.788628169680618 -0.0126855930572287 0.622810191892415 0.864796516322929 0.204797890753773 1.09594848966918 0.694633307971832 -0.42742685058864 1.18128511866332 2.44228335888558 -0.0399348407876621 1.49616930662302 2.20512428994980 0.406032089914809 1.94715687729942 -0.416533647623164 -0.284094495129610 1.51854703383664 0.916022875213058 1.83407719125441 -0.536700781648539 1.41517790819178 1.1177405005412 2.11418412112303 1.31556969800348 -2.42106795632592 0.699757625343165 -0.270473087099331 1.41701352639152 -1.02574870464656 -0.643219884173562 1.65551778118359 0.0919803758272177 0.821306377341778 0.292099051592213 1.17707861039186 0.53538151864468 1.79220828147716 0.252807013470924 2.09376812328318 0.0392827199067639 0.763450774403584 -0.167305318962335 1.44212366237574 0.56919052316629 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[+] Show/hide bicluster #321 motif PSSM #1. bicluster 321 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 11x4
POSITION A C G T
1 0.75 0.083333 0 0.166667
2 0.75 0.083333 0.166667 0
3 0.416667 0 0 0.583333
4 1 0 0 0
5 0 0 0.166667 0.833333
6 0.166667 0.833333 0 0
7 0.916667 0 0.083333 0
8 0 0 0 1
9 0 0 0.666667 0.333333
10 0.083333 0.083333 0.333333 0.5
11 0 0.833333 0 0.166667 [+] Show/hide bicluster #321 motif PSSM #2. bicluster 321 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 21x4
POSITION A C G T
1 0.142857 0.857143 0 0
2 0.714286 0.142857 0.142857 0
3 0 0.142857 0.714286 0.142857
4 0 1 0 0
5 1 0 0 0
6 0 0.428571 0 0.571429
7 0 0 0.285714 0.714286
8 0 0.142857 0.714286 0.142857
9 0 0.714286 0.285714 0
10 0.571429 0 0.428571 0
11 0 0.142857 0.571429 0.285714
12 1 0 0 0
13 0.142857 0.857143 0 0
14 0 0 1 0
15 0.285714 0.285714 0.142857 0.285714
16 0 0.714286 0.285714 0
17 0.142857 0.142857 0.571429 0.142857
18 0.285714 0.714286 0 0
19 0.142857 0 0.857143 0
20 0.571429 0 0 0.428571
21 0.714286 0.285714 0 0 |