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[+] Show/hide bicluster #314 rows and columns.
bicluster 314
Desulfovibrio vulgaris Hildenborough
29x372
[+] Show/hide bicluster #314 rows (genes).
bicluster 314 genes
Desulfovibrio vulgaris Hildenborough
29
[+] Show/hide bicluster #314 rows (short gene names).
bicluster 314 short names
Desulfovibrio vulgaris Hildenborough
29
short_name
[+] Show/hide bicluster #314 rows (long gene names).
bicluster 314 long names
Desulfovibrio vulgaris Hildenborough
29
long_name
[+] Show/hide bicluster #314 rows (NCBI RefSeq gene IDs).
bicluster 314 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #314 gene upstream sequences.
bicluster 314 upstream sequences
Desulfovibrio vulgaris Hildenborough
29
upstream
[+] Show/hide bicluster #314 columns (arrays; conditions).
bicluster 314 arrays
Desulfovibrio vulgaris Hildenborough
372
[+] Show/hide bicluster #314 ratios.
bicluster 314 ratios
Desulfovibrio vulgaris Hildenborough
29x372
GENES X111.13 X111.9 X115.1 X116.13 X116.6 X116.9 X121.1 X121.10 X121.11 X121.13 X121.14 X121.15 X121.16 X121.5 X121.6 X121.7 X121.8 X121.9 X123.1 X123.12 X123.13 X123.14 X123.16 X123.4 X123.6 X123.7 X1258.1 X1258.100 X1258.101 X1258.102 X1258.103 X1258.104 X1258.106 X1258.107 X1258.109 X1258.11 X1258.113 X1258.114 X1258.116 X1258.117 X1258.12 X1258.14 X1258.17 X1258.2 X1258.21 X1258.22 X1258.29 X1258.30 X1258.31 X1258.32 X1258.33 X1258.34 X1258.35 X1258.36 X1258.41 X1258.46 X1258.49 X1258.51 X1258.52 X1258.53 X1258.54 X1258.56 X1258.57 X1258.58 X1258.6 X1258.60 X1258.61 X1258.62 X1258.63 X1258.64 X1258.66 X1258.67 X1258.68 X1258.7 X1258.70 X1258.71 X1258.72 X1258.73 X1258.74 X1258.75 X1258.77 X1258.78 X1258.79 X1258.80 X1258.81 X1258.82 X1258.83 X1258.84 X1258.85 X1258.86 X1258.87 X1258.88 X1258.89 X1258.9 X1258.90 X1258.91 X1258.92 X1258.94 X1258.95 X1258.96 X1258.97 X1258.98 X126.1 X126.11 X126.2 X126.4 X126.6 X1271.1 X1271.2 X1271.3 X1271.4 X1271.5 X1271.9 X129.1 X129.2 X1305.1 X1310.1 X1310.2 X1310.3 X1311.1 X132.1 X132.2 X14.10 X14.11 X14.12 X14.2 X14.8 X1413.1 X1413.10 X1413.11 X1413.12 X1413.13 X1413.14 X1413.15 X1413.16 X1413.17 X1413.2 X1413.3 X1413.4 X1413.5 X1413.7 X1413.8 X1413.9 X1414.1 X1414.10 X1414.11 X1414.2 X1414.3 X1414.4 X1414.5 X1414.6 X1414.7 X1414.8 X1414.9 X1415.2 X1415.3 X1415.4 X1416.1 X1416.2 X1416.3 X1416.4 X1416.5 X1416.6 X1416.7 X1416.8 X1417.1 X1417.12 X1417.13 X1417.14 X1417.3 X1417.4 X1417.5 X1417.6 X1417.9 X15.2 X16.11 X16.12 X16.15 X16.17 X16.18 X16.6 X16.8 X17.1 X1709.12 X1709.15 X1709.2 X1709.3 X1709.4 X1709.5 X1709.6 X1709.8 X1709.9 X1713.1 X1713.2 X1713.3 X1713.5 X1718.2 X1718.3 X1719.1 X1721.1 X1721.14 X1721.15 X1721.16 X1721.18 X1721.2 X1721.6 X1731.1 X1736.10 X1736.17 X1736.19 X1736.21 X1736.5 X1737.1 X175.1 X175.2 X175.4 X1754.1 X1755.103 X1755.108 X1755.11 X1755.110 X1755.111 X1755.114 X1755.115 X1755.116 X1755.122 X1755.123 X1755.124 X1755.125 X1755.126 X1755.128 X1755.131 X1755.135 X1755.16 X1755.17 X1755.21 X1755.25 X1755.29 X1755.40 X1755.44 X1755.51 X1755.60 X1755.62 X1755.63 X1755.64 X1755.75 X1755.86 X1755.93 X1755.95 X177.4 X178.1 X178.2 X178.4 X195.1 X199.1 X20.1 X22.2 X22.3 X23.2 X23.4 X23.8 X24.1 X24.10 X24.2 X24.3 X24.4 X24.5 X24.6 X24.7 X24.8 X24.9 X25.3 X26.1 X27.1 X27.10 X27.11 X27.12 X27.13 X27.14 X27.15 X27.16 X27.2 X27.3 X27.4 X27.5 X27.6 X27.7 X27.8 X27.9 X28.3 X3.1 X3.2 X3.4 X3.5 X30.1 X30.2 X31.1 X31.2 X31.3 X32.1 X33.1 X33.2 X33.5 X37.1 X37.2 X37.3 X37.4 X37.5 X37.6 X37.7 X37.8 X37.9 X38.1 X38.2 X38.3 X38.5 X38.6 X380.1 X41.3 X41.5 X42.1 X42.4 X426.1 X435.10 X435.11 X435.2 X435.3 X435.5 X435.6 X435.7 X435.8 X435.9 X449.1 X450.2 X450.5 X56.1 X57.4 X59.1 X59.2 X6.1 X6.10 X6.11 X6.12 X6.14 X6.15 X6.16 X6.3 X6.4 X6.5 X6.8 X6.9 X60.1 X60.2 X60.3 X65.1 X65.3 X71.1 X71.4 X73.2 X73.4 X74.1 X74.2 X74.3 X74.4 X74.5 X75.1 X75.2 X75.3 X86.10 X86.3 X86.4 X86.5
DVU0020 0.496924995370523 -0.115456925333649 0.231918193712389 0.495948659487149 0.270564429379392 -0.111913344902834 -0.447861560834624 2.45879412913517 -0.19638039139012 0.820112611360583 0.966129066807358 2.97923932635448 2.86880803416742 -0.685227523256699 0.479673250365274 -0.74125127988816 2.23013343528997 -0.338290261768663 -0.0766627456946251 0.2385780307526 0.95191481121705 1.07015679047110 0.345319370736319 1.09881484277728 1.35379572828682 0.574162439722373 0.752432567709262 -0.534819914633977 0.272520245545119 -0.472463338456253 0.698098925529695 -0.146465730317475 0.895493288114584 -0.138014371958255 0.436511657762605 1.10241989620816 -0.712036668962477 -1.43710048542384 0.205506814477615 -0.608678702281528 0.352307797469968 0.607699027046437 -0.646097050146735 -0.45749599931017 0.657536178684219 -0.227219084389113 -0.996194432609942 0.46971022219629 -1.68384147340559 -1.71842986218855 0.759740150939408 1.78702473099040 -0.972421204119614 -1.14598416683304 1.02450168947708 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DVUA0033 -1.21584908988832 -0.0864730718052323 NA -1.18110494148520 -1.03966045983978 -0.0564043770851018 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.652652627261937 0.0415577749705511 0.131613132205922 -0.661825475179533 -1.06544988978370 -0.196446806427091 0.108226443358127 0.744395701474654 -0.190070102187214 0.837173696475365 -0.361774075487780 -0.934245816653342 0.502663415007945 -0.0615289598536574 -0.0338328873810817 0.498558229215564 -0.824362438577204 0.632605680869864 0.363978722130514 -0.342080063620843 -0.700430674214795 -0.811679351638173 -0.446571239027221 -0.654224114673862 0.0746518881275871 0.362857557943519 0.306192991157743 -0.10823984425551 -0.0412455738661726 1.31763567230207 1.00222764030230 -0.349681424126514 0.114758518398356 0.781723171383199 0.260198723060501 -0.505296359638326 -0.24373605233085 -0.831764775854415 0.560681339747253 -0.315608647414061 -0.374469103820519 -0.99129118121624 -1.61780436301647 -0.547694941408047 -0.704397870568777 -0.363682044837955 -0.972115956564823 0.904533771558613 -0.502299069817709 -0.482317137680266 -1.32516060788802 -1.81757061152998 -0.699338700101308 -1.34908319994898 0.355445932915647 -0.128017313196248 0.133287846332341 0.251632763307557 0.567032834378192 1.09809845627329 -0.133494432443483 -0.660028958837296 0.602906107897451 0.301882148029287 -0.103506541154108 -0.0449187465706412 0.90436393840366 0.665684668261537 1.37661952311018 -0.468151991099965 -0.99044068861995 0.483501458571759 0.51393078338186 -0.213327956665118 -0.715468869357277 0.234933387618191 NA NA NA NA NA 0.0217776523867669 -0.030212389491079 0.0555863916161288 -0.211031228608683 -0.0169086154435548 -0.0544701366687695 -2.16850163616692 -3.54713553971342 -0.206355509561382 0.0323585233046457 0.421842735573145 0.335754574691756 -1.20307975955029 NA 1.70989055327505 -0.174651109267610 0.0658773520312166 0.452452508110384 -0.751063510356692 -1.53739897871839 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0348217674622263 -0.515766308276876 -0.128272062928678 0.362531159848844 -0.316062420374951 0.369036565776459 0.37236423415632 NA -0.170815268244413 -0.0838970478181907 0.192615741961377 0 0.147022173964102 -0.0977131076557725 0.0939442711194905 0.0643637140376977 -0.105242421752741 -0.144480514654508 -0.0301920891217760 -0.0416759947682567 -0.201817779952481 -0.498000168082961 -0.212141778223493 -0.997835064968024 -0.455248651788103 0.731241592894932 -0.631353692080694 0.0401005268917626 -0.719773078378119 -0.351594700762782 0.466717166304916 0.920736915998351 0.0312079036798389 -0.0270231085960742 -0.0835426537893786 0.00523258604053351 -0.103080764127355 -1.56129503434889 NA NA NA -0.548130138867614 1.55978723437007 2.03087521613629 2.14376119131913 -0.0890777551371722 -0.0135217708237648 -0.641214629640155 0.313425495280001 0.563405304334117 0.0401066302707688 -2.95213569590764 -0.930892938664543 -0.562693331904837 0.384548436202677 -1.05115736833718 1.39879071076069 1.27603716391076 2.57378404694632 -0.0414278791434425 -0.363063746008204 0.879707614040439 0.405546713626792 1.8910945686808 1.79030920578836 0.142321245307863 -0.846447382828715 0.0310144531017752 1.30895825954119 0.66807162018154 1.01186699866741 2.34405816844187 1.26085699886531 1.17415982690484 NA NA NA NA -2.35005062516867 -0.569300903089728 -0.895749416982972 0.910195318997555 NA NA NA NA NA NA NA NA NA NA NA 0.0730018528814965 1.96674993192629 NA -0.00650199599630084 NA 0.546837283975534 -0.16894710353993 -0.211376202204681 NA NA NA NA NA 0.536721596683644 0.72702760773766 NA NA NA NA NA -0.715559093220846 NA NA NA NA 0.943663065095488 NA NA NA NA NA NA NA NA -0.622075229169861 NA NA NA NA NA NA NA NA NA NA NA NA -0.848119177947784 NA -0.282308080828035 NA NA NA -0.558569570611133 0.092409669345907 -0.518236849952833 -1.93827156548371 0.421151461559626 0.529705364469646 1.33786306642129 1.94974008000052 -0.0853128990654594 -0.409682947042813 -1.32639455190447 0.660795330949021 0.105048705810373 -0.004759812995433 NA 0.689069897605656 -0.160623952125708 0.171724937080630 0.79664858669622 NA NA NA NA NA NA NA NA -1.12249127388203 NA -0.955041090384428 0.000614570461271069 NA NA 0.759809387108165 NA 0.610512775689215 -0.315242444673694 NA NA -0.309898007578765 NA NA 0.335360508699404 NA 0.158310771482387 NA NA 1.01615263218693 -1.43419880065396 -0.585765431369512 -1.75915065986918
[+] Show/hide bicluster #314 motif PSSM #1. bicluster 314 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 22x4
POSITION A C G T
1 0 0 0.333333 0.666667
2 0 1 0 0
3 0 0.833333 0 0.166667
4 0 0 1 0
5 0 0.666667 0 0.333333
6 0 0 0 1
7 0 0 0.333333 0.666667
8 0 0.5 0.5 0
9 0 0.166667 0.5 0.333333
10 0 0 1 0
11 0 0 1 0
12 0 1 0 0
13 0.666667 0 0 0.333333
14 0 0.5 0 0.5
15 0 0.166667 0.833333 0
16 0.833333 0 0 0.166667
17 0 0.5 0.5 0
18 0 1 0 0
19 0 0 1 0
20 0 0.166667 0.666667 0.166667
21 0.5 0.333333 0.166667 0
22 0 0.166667 0 0.833333 [+] Show/hide bicluster #314 motif PSSM #2. bicluster 314 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 15x4
POSITION A C G T
1 0.111111 0 0 0.888889
2 0.111111 0.888889 0 0
3 0 0.111111 0.666667 0.222222
4 0.222222 0.111111 0.666667 0
5 0.222222 0.777778 0 0
6 0.666667 0 0.333333 0
7 0 0.555556 0 0.444444
8 0 0.888889 0.111111 0
9 0 0 0.777778 0.222222
10 0 0 0 1
11 0 1 0 0
12 0.333333 0 0.555556 0.111111
13 0.666667 0 0.111111 0.222222
14 0.111111 0.888889 0 0
15 0.888889 0.111111 0 0 |