</td><td> <p><a href="#bicluster034" onclick="toggleVisible('bicluster034'); return false;">[+]</a> Show/hide bicluster #34 rows and columns.</p> <div id="bicluster034" style="display:none;" class="gaggle-data bicluster"> <span class="gaggle-name hidden">bicluster 34</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">23x445</span> <div class="gaggle-cluster"> <ol class="gaggle-rowNames"> <li>YBR212W</li><li>YDR148C</li><li>YDR178W</li><li>YDR254W</li><li>YDR313C</li><li>YEL012W</li><li>YGL010W</li><li>YGR161C</li><li>YGR243W</li><li>YHR096C</li><li>YIR016W</li><li>YJL066C</li><li>YJL103C</li><li>YJL141C</li><li>YJL142C</li><li>YJL163C</li><li>YJL164C</li><li>YKL171W</li><li>YLL020C</li><li>YLR149C</li><li>YNL115C</li><li>YNR001C</li><li>YOR215C</li> </ol> <ol class="gaggle-columnNames"> <li>X1009.YPD.2.h..25C.</li><li>X1012.YPD.12.h..25C.</li><li>X1015.YPD.3.d..25C.</li><li>X1016.YPD.5.d..25C.</li><li>X1017.YPD.7.d..25C.</li><li>X1018.YPD.13.d..25C.</li><li>X103.alpha.factor.release.sample026</li><li>X104.alpha.factor.release.sample024</li><li>X106.heat.shock.05.min</li><li>X107.heat.shock.10.min</li><li>X109.heat.shock.20.min</li><li>X1097.alpha.factor.release.sample020</li><li>X1103.alpha.factor.release.sample028</li><li>X1106.DY.zap1.3.mM.vs..76.nM.zinc</li><li>X1107.alpha.factor.release.sample025</li><li>X1108.DY.zap1.3.mM.vs..10.uM.zinc..2</li><li>X1139.DY1457..wild.type..3.mM.vs..76.nM.zinc</li><li>X11466.yO1.test.hyb</li><li>X115.heat.shock.20.min.repeat</li><li>X1155.DY1457..wild.type..3.mM.vs..10.uM.zinc</li><li>X1167.NBW7.strain.low.Pi.vs..High.Pi..exp.1</li><li>X1168.PHO81c.vs..wild.type..exp.1</li><li>X117.heat.shock.60.min</li><li>X1170.pho85.delete.vs..wild.type</li><li>X1172.pho80.mutant.vs.wild.type</li><li>X1173.PHO4c.vs..wild.type</li><li>X118.heat.shock.80.min</li><li>X11826.Pomona.College.Bio164..WT.dna2.2.mRNA</li><li>X11827.Pomona.College.Bio164..WT.dna2.1</li><li>X11828.Pomona.College.Bio164..WT.rad27.mRNA</li><li>X120.w303a.vs.w303a.fkh1.fkh2</li><li>X12169.aft2.minus.cells.with.control.plasmid.vs.aft2.minus.cells.with.AFT2.vector</li><li>X12182.Swarthmore.College..sid2.37Cplus.wt.37C</li><li>X12361.Swarthmore.College.sid2.mutant</li><li>X1249.mec1_plus_gamma_5_min</li><li>X1251.mec1_plus_gamma_20_min</li><li>X1252.mec1_plus_gamma_30_min</li><li>X1253.mec1_plus_gamma_45_min</li><li>X1254.mec1_plus_gamma_60_min</li><li>X1255.mec1_plus_gamma_90_min</li><li>X1257.mec1_plus_gamma_120_min</li><li>X1258.DBYyap1...37degree.heat..repeat.</li><li>X12592.Muhlenberg.College.Bio550..tolnaftate.treatment</li><li>X12598.Muhlenberg.College.Bio550..increased.salt.concentration</li><li>X12732.Nitrogen.Depletion.4.h</li><li>X12736.Nitrogen.Depletion.1.d</li><li>X12739.Nitrogen.Depletion.30.min.</li><li>X12741.Nitrogen.Depletion.1.h</li><li>X12742.Nitrogen.Depletion.2.h</li><li>X12801.DBYmsn2msn4..good.strain....0.32.mM.H2O2</li><li>X1301.PHO81c.vs..wild.type..exp.2</li><li>X1302.diauxic.shift.timecourse..15.5.hr</li><li>X13057.wt.crz1.Na.30min..1.</li><li>X13059.wt.crz1.Na.45min..1.</li><li>X13060.wt.crz1.Na.45min..2.</li><li>X13063.wt.crz1.Ca.30min..1.</li><li>X13064.wt.crz1.Ca.30min..2.</li><li>X13066.Na.Na.FK.30min..2.</li><li>X13067.Na.Na.FK.45min..1.</li><li>X13093.Missouri.Western.State.College.10.uM.DAPI.Cy3.4.hrs..exp.1.</li><li>X13095.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.1.</li><li>X13096.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.2.</li><li>X1311.diauxic.shift.timecourse..11.5.hr</li><li>X1312.diauxic.shift.timecourse..13.5.hr</li><li>X13133.Ca.Ca.FK.30min..2.</li><li>X13490.Y5.mRNP.vs..Poly</li><li>X13504.Univ..of.So..Colo..AAP1.</li><li>X14711.Ca.5min..1.</li><li>X14712.Ca.15min..1.</li><li>X14731.Mount.Saint.Mary.s.College..MD..hst3.hst4..v..wt</li><li>X14732.Univ..of.So..Colo..Wild.Type</li><li>X14761.Ca.30min..1.</li><li>X14763.Ca.60min..1.</li><li>X14946.Hydrostatic.pressure..C2.vs.P2.</li><li>X14947.Hydrostatic.pressure..C1.vs.P1.</li><li>X15183.Ca.FK.5min..3.</li><li>X15184.Ca.FK.5min..2.</li><li>X1562.NBW7.strain.High.Pi.vs..Low.Pi..exp.2</li><li>X15636.Ca.FK.30min..2.</li><li>X15638.Ca.FK.60min..2.</li><li>X15726.Lycoming.College...minimal.vs..rich.medium</li><li>X15727.Lycoming.College...X.ray.exposure.vs..control</li><li>X15728.Lycoming.College...peroxide.vs..control</li><li>X15729.Lycoming.College...AICAr.vs..no.purine</li><li>X16514.DES.genomic.DNA.vs..MHY26..dun1..genomic.DNA..correct.version.</li><li>X1662.cdc15.030.min</li><li>X1665.cdc15.150.min</li><li>X1666.CLN3.induction.40.minutes</li><li>X1668.cdc15.130.min</li><li>X1673.alpha.factor.release.sample021</li><li>X1674.Elutriation2.Sample2.Time5.5hrs</li><li>X1679.Elutriation2.Sample2.Time6.0hrs</li><li>X1686.YP.raffinose.vs.reference.pool</li><li>X17473.Ca.FK.30min..5.</li><li>X17677.Na.FK.60min..4.</li><li>X17691.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.3.</li><li>X17694.Missouri.Western.State.College.10.uM.DAPI.Cy5.12.hrs..exp.2.</li><li>X17695.Missouri.Western.State.College.Galactose.Cy5..exp.1.</li><li>X18418.2mM.MD.170min</li><li>X18421.2mM.MD.140min</li><li>X18423.2mM.MD.000min</li><li>X18424.2mM.MD.055min</li><li>X18425.2mM.MD.040min</li><li>X18427.2mM.MD.020min</li><li>X18428.2mM.MD.030min</li><li>X18429.2mM.MD.210min</li><li>X18430.2mM.MD.014min</li><li>X18431.2mM.MD.070min</li><li>X18432.2mM.MD.077min</li><li>X18433.2mM.MD.085min</li><li>X18434.2mM.MD.100min</li><li>X2064.Hypo.osmotic.shock...5.min</li><li>X2108.cdc15.210.min</li><li>X2141.Elutriation2.Sample2.Time1.0hrs</li><li>X2142.cdc15.110.min</li><li>X2144.heat.shock.37.to.37..30.minutes</li><li>X21628..24.mM.H2O2..105.minutes</li><li>X21631..24.mM.H2O2..190.minutes</li><li>X21632..24.mM.H2O2..250.minutes</li><li>X21634..24.mM.H2O2..155.minutes</li><li>X21638..24.mM.H2O2..070.minutes</li><li>X21641..24.mM.H2O2..112.minutes</li><li>X21643..24.mM.H2O2..140.minutes</li><li>X21645..24.mM.H2O2..020.minutes</li><li>X21648..24.mM.H2O2..030.minutes</li><li>X21650..24.mM.H2O2..040.minutes</li><li>X21654..24.mM.H2O2..275.minutes</li><li>X21661..24.mM.H2O2..049.minutes.redo</li><li>X21663..24.mM.H2O2..063.minutes.redo</li><li>X2554.Hypo.osmotic.shock..15.minutes</li><li>X2555.Hypo.osmotic.shock..30.minutes</li><li>X2558.1M.sorbitol.vs..YPD...basal</li><li>X2559.29C.to.33C...5.min</li><li>X2560.29C.to.33C...15.min</li><li>X27094.P1Comp.09.hr.10.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27095.P1Comp.05.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27096.P1Comp.19.hr.6.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27097.P1Comp.11.hr.10.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27098.P1Comp.13.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27099.P1Comp.15.hr.0.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27100.P1Comp.16.hr.55.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27101.P1Comp.07.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27102.P1Comp.21.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27103.P1Comp.24.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27105.P1Comp.27.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27108.P1Comp.45.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X28838.P2Comp.06.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28842.P2Comp.08.hr.48.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28844.P2Comp.09.hr.36.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28845.P2Comp.09.hr.49.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28847.P2Comp.10.hr.20.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28849.P2Comp.10.hr.50.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28851.P2Comp.11.hr.51.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28852.P2Comp.12.hr.22.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28857.P2Comp.25.hr.43.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X29.alpha.factor.release.sample016</li><li>X2964.WT.vs.lpz8.null.cells.in.low.Cu.repeat</li><li>X2966.WT.vs.Lpz8.null.cells.in.high.Cu.repeat</li><li>X297.Kb.vs..Ctrl</li><li>X298.Tunicamycin.vs..Ctrl</li><li>X3020.WT.vs.lpz8.null.cells.in.high.Cu</li><li>X3022.WT.vs.lpz8.null.cells.in.low.Cu</li><li>X30462.Pomona.Brown.Sir3xpol2.12.red</li><li>X30463.Pomona.Brown.pol2.12.red</li><li>X30464.Rich.vs..Minimal.II</li><li>X32250.DBY8778_heat_shock2_0min</li><li>X32251.DBY8778_heat_shock2_5min</li><li>X32255.DBY8778_heat_shock2_60min</li><li>X32622.S1Comp.05.hr.10.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32624.S1Comp.07.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32626.S1Comp.08.hr.55.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32628.S1Comp.12.hr.57.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32629.S1Comp.15.hr.20.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X33261.delKIN82_heat.shock._30min</li><li>X33361.delKin82.DBY10089..vs..wt..DBY8778.</li><li>X33771.DBY8778.wt._stationary_phase_0hours</li><li>X33772.DBY8778.wt._stationary_phase_3hours</li><li>X33773.DBY8778.wt._stationary_phase_5hours</li><li>X33774.DBY8778.wt._stationary_phase_7hours</li><li>X33777.delYPL230w_stationary_phase_0hours</li><li>X33778.delYPL230w_stationary_phase_2hours</li><li>X33779.delYPL230w_stationary_phase_5hours</li><li>X34346.delPPT1.DBY10090...vs..wt.DBY8778.</li><li>X34348.wt_hypo_osmotic_shock_7min</li><li>X34350.wt_hypo_osmotic_shock_30min</li><li>X34351.wt_hypo_osmotic_shock_60min</li><li>X34352.delPPT1_hypo_osmotic_shock_0min</li><li>X34353.delPPT1_hypo_osmotic_shock_7min</li><li>X34354.delPPT1_hypo_osmotic_shock_15min</li><li>X34355.delPPT1_hypo_osmotic_shock_30min</li><li>X34356.delPPT1_hypo_osmotic_shock_60min</li><li>X34359.batch.02X25.3</li><li>X34360.batch.02X25.4</li><li>X34365.batch.02X25.6</li><li>X34368.batch.02X25.7</li><li>X34872.S4Comp.05.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34874.S4Comp.06.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison..rescan.</li><li>X34878.S4Comp.09.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34881.S4Comp.11.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison..rescan.</li><li>X34883.S4Comp.14.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34884.S4Comp.15.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34885.S4Comp.34.hr.20.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X37.alpha.factor.release.sample018</li><li>X37279.CC.SP.1A..Sulfate.Phosphate.Chemostat.Comparison</li><li>X37281.CC.SP.3A..Sulfate.Phosphate.Chemostat.Comparison</li><li>X37282.CC.SP.1B..Sulfate.Phosphate.Chemostat.Comparison</li><li>X37285.CC.SP.3B..Sulfate.Phosphate.Chemostat.Comparison</li><li>X38146.03II01.batch.p2</li><li>X38147.03II01.batch.p3</li><li>X38149.03II01.batch.p5</li><li>X38151.03II01.batch.p7</li><li>X38153.03II01.batch.p9</li><li>X38156.03II01.batch.p12</li><li>X40.alpha.factor.release.sample029</li><li>X404.W303a.vs.GZY29.3b</li><li>X4048.0.8M.NaCl..FK506...30.min</li><li>X405.W303a.vs.GZY45.15c</li><li>X406.heat.shock.37.to.37..20.minutes</li><li>X407.heat.shock.33.to.37..20.minutes</li><li>X408.heat.shock.29.to.37..20.minutes</li><li>X409.heat.shock.25.to.37..20.minutes</li><li>X40946.H2O2_II_7_min</li><li>X40947.H2O2_II_14_min</li><li>X40949.H2O2_II_35_min</li><li>X40951.H2O2_II_49_min</li><li>X40952.H2O2_II_56_min</li><li>X40953.H2O2_II_63_min</li><li>X40954.H2O2_II_70_min</li><li>X40955.H2O2_II_77_min</li><li>X40957.H2O2_II_120_min</li><li>X40958.H2O2_II_140_min</li><li>X40960.H2O2_II_180_min</li><li>X40961.MD_II_0_min</li><li>X40962.MD_II_7_min</li><li>X40964.MD_II_21_min</li><li>X40965.MD_II_28_min</li><li>X40966.MD_II_35_min</li><li>X40967.MD_II_42_min</li><li>X40968.MD_II_49_min</li><li>X40969.MD_II_56_min</li><li>X40970.MD_II_63_min</li><li>X40972.MD_II_85_min</li><li>X40975.MD_II_130_min</li><li>X40976.MD_II_140_min</li><li>X41003.H2O2_II_0_min</li><li>X42.alpha.factor.release.sample022</li><li>X42045.L1CompR.05.hr.15.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42046.L1CompR.07.hr.05.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42047.L1CompR.09.hr.05.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42048.L1CompR.11.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42049.L1CompR.13.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42051.L1CompR.18.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42053.L1CompR.26.hr.40.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42055.U3Comp.05.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison..rescan.</li><li>X42057.U3Comp.07.hr.15.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42059.U3Comp.08.hr.08.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42062.U3Comp.10.hr.08.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42063.U3Comp.11.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42064.U3Comp.12.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42065.U3Comp.13.hr.30.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42066.U3Comp.25.hr.55.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42191.L2.Comp.05.hr.00.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42194.L2.Comp.07.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42197.L2.Comp.11.hr.04.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42198.L2.Comp.12.hr.03.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42199.L2.Comp.12.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42218.U2.Comp.05.hr.15.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42221.U2.Comp.06.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42224.U2.Comp.08.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison..rescan.</li><li>X42226.U2.Comp.10.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42227.U2.Comp.11.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42228.U2.Comp.12.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42229.U2.Comp.13.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42231.U2.Comp.31.hr.35.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42369.CC.PU.3A.Phosphate.Uracil.Chemostat.Comparison</li><li>X42370.CC.PU.3B.Phosphate.Uracil.Chemostat.Comparison</li><li>X42373.CC.UL.3B.Uracil.Leucine.Chemostat.Comparison</li><li>X42375.CC.LS.3B.Leucine.Sulfate.Chemostat.Comparison</li><li>X42378.CC.PU.2A.Phosphate.Uracil.Chemostat.Comparison</li><li>X42379.CC.UL.2B.Uracil.Leucine.Chemostat.Comparison</li><li>X42380.CC.UL.2A.Uracil.Leucine.Chemostat.Comparison</li><li>X42381.CC.LS.2B.Leucine.Sulfate.Chemostat.Comparison</li><li>X42382.CC.LS.2A.Leucine.Sulfate.Chemostat.Comparison</li><li>X42383.CC.PU.1B.Phosphate.Uracil.Chemostat.Comparison</li><li>X42385.CC.PU.1A.Phosphate.Uracil.Chemostat.Comparison</li><li>X42386.CC.UL.1B.Uracil.Leucine.Chemostat.Comparison</li><li>X42390.CC.LS.1B.Leucine.Sulfate.Chemostat.Comparison</li><li>X42391.CC.LS.1A.Leucine.Sulfate.Chemostat.Comparison</li><li>X42392.L2.CompR.05.hr.00.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42394.L2.CompR.06.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42395.L2.CompR.07.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42396.L2.CompR.08.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42398.L2.CompR.09.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42399.L2.CompR.11.hr.04.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42400.L2.CompR.12.hr.03.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42401.L2.CompR.12.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42402.L2.CompR.24.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42404.CC.PU.2B.Phosphate.Uracil.Chemostat.Comparison</li><li>X45181.Low.D.chemostat.vs..High.D.chemostat</li><li>X4781.DBYtrr1...0.3.mM.H2O2...30.min</li><li>X4782.DBYtrr1.vs..wild.type.DBY7286</li><li>X4784.29C.to.33C...90.min</li><li>X4785.29C..1M.sorbitol.to.33C...1M.sorbitol...15.min</li><li>X4787.29C..1M.sorbitol.to.33C...1M.sorbitol...30.min</li><li>X4789.33C...1M.sorbitol.vs..29C...adapted</li><li>X4872.1M.sorbitol...60.min</li><li>X50.Elutriation2.Sample2.Time0.5hrs</li><li>X512.2.5mM.DTT.005.min</li><li>X513.2.5mM.DTT.015.min</li><li>X514.2.5mM.DTT.030.min</li><li>X515.2.5mM.DTT.045.min</li><li>X516.2.5mM.DTT.060.min</li><li>X517.2.5mM.DTT.090.min</li><li>X518.2.5mM.DTT.120.min</li><li>X5187.MHY1..crt1..vs.CRY1..wild.type.</li><li>X519.2.5mM.DTT.180.min</li><li>X52.Elutriation2.Sample2.Time1.5hrs</li><li>X5239.DES460..wt....mock.irradiation...30.min</li><li>X5240.DES460..wt....mock.irradiation...60.min</li><li>X5242.DES460..wt....mock.irradiation...90.min</li><li>X5243.DES459..mec1....mock.irradiation...5.min</li><li>X5244.DES459..mec1....mock.irradiation..15.min</li><li>X5245.DES459..mec1....mock.irradiation...30.min</li><li>X53.Elutriation2.Sample2.Time2.0hrs</li><li>X5358.1M.sorbitol...5.min</li><li>X55.Elutriation2.Sample2.Time3.0hrs</li><li>X584.17.deg.growth</li><li>X585.21.deg.growth</li><li>X597.25.deg.growth</li><li>X634.Elutriation2.Sample2.Time6.5hrs</li><li>X6349.DES460...0.02..MMS...15.min</li><li>X6351.DES460...0.02..MMS...30.min</li><li>X6358.DES460...0.02..MMS...90.min</li><li>X6364.DES459..mec1.....0.02..MMS...15.min</li><li>X6672.wt...0.3.mM.H2O2...10.min</li><li>X6676.wt...0.3.mM.H2O2...30.min</li><li>X6679.trr...0.1.mM.H2O2...10.min</li><li>X6685.trr...0.3.mM.H2O2...10.min</li><li>X6688.trr...0.3.mM.H2O2...30.min</li><li>X680.YP.glucose.vs.reference.pool</li><li>X681.YP.galactose.vs.reference.pool</li><li>X6826.Sporulation.t2hrs</li><li>X6834.Sporulation.t5hrs</li><li>X6836.Sporulation.t7hrs</li><li>X684.YP.fructose.vs.reference.pool</li><li>X685.YP.sucrose.vs.reference.pool</li><li>X6854.Early.Sporulation.ndt80.delete</li><li>X6856.Sporulation.t30min</li><li>X6859.Mid.Sporulation.ndt80.delete</li><li>X686.YP.ethanol.vs.reference.pool</li><li>X692.DBYyap1....0.3.mM.H2O2..20.min.</li><li>X7530.DBY.msn2msn4.37C...20.min</li><li>X7535.25C....15.min</li><li>X7536.25C....30.min</li><li>X7537.25C....45.min</li><li>X7540.pRS.ROX1.GAL.media</li><li>X7541.DES459..mec1....log.phase..IR.time</li><li>X7542.DES459..mec1....log.phase..MMS.time</li><li>X7549.33C.no.sorbitol.5.min</li><li>X7759.Na.30min</li><li>X7761.Na.60min</li><li>X7762.Na.FK.15min</li><li>X7763.Na.FK.30min</li><li>X7764.Na.FK.45min</li><li>X7765.Na.FK.60min</li><li>X78.cdc.15.010.min</li><li>X79.cdc15.050.min</li><li>X797.Heat.Shock.000.minutes..series.3.</li><li>X7985.cdc47.1.ts.grown.at.34C.versus.37C</li><li>X80.cdc15.070.min</li><li>X800.Heat.Shock.015.minutes</li><li>X801.Heat.Shock.030inutes</li><li>X810.DES460..wild.type....heat.20.min</li><li>X811.DES459..mec1....heat.20.min</li><li>X812.1M.sorbitol...45.min....centrifugation.problem.</li><li>X814.DBYmsn2.4..37degree.heat...20.min</li><li>X815.1M.sorbitol...15.min</li><li>X8193.steady.state.15.dec.C</li><li>X8195.steady.state.21.dec.C</li><li>X8197.steady.state.25.dec.C</li><li>X8213.steady.state.36.dec.C</li><li>X8217.steady.state.17.dec.C</li><li>X8230.dtt.060.min</li><li>X8233.dtt.120.min</li><li>X8234.dtt.240.min</li><li>X8235.dtt.480.min</li><li>X827.wt.vs.zap1...61.nM.zinc</li><li>X8286.mcm1.1..pRS.MCM7.vs..wild.type...pRS.MCM7</li><li>X8289.MCM7.formaldehyde.x.linked.in.veg..cells..IP.d.w..polyclonal.AB</li><li>X8291.wt.pRS315.vs..wt.pRS.MCM7</li><li>X83.cdc15.160.min.repeat</li><li>X831.1.5.mM.diamide..20.min.</li><li>X834.1.5.mM.diamide..30.min.</li><li>X836.1.5.mM.diamide..40.min.</li><li>X838.1.5.mM.diamide..50.min.</li><li>X84.cdc15.190.min</li><li>X840.1.5.mM.diamide..60.min.</li><li>X842.1.5.mM.diamide..90.min.</li><li>X8524.DES459..mec1.....0.02..MMS...90.min</li><li>X8525.DES459..mec1.....0.02..MMS...120.min</li><li>X8526.dun1....0.02..MMs...30.min</li><li>X8528.dun1....0.02..MMS...90.min</li><li>X854.YPD_6_h_30C</li><li>X855.YPD_8_h_30C</li><li>X856.YPD_10_h_30C</li><li>X857.YPD_12_h_30C</li><li>X858.YPD_1_d_30C</li><li>X859.YPD_2_d_30C</li><li>X860.YPD_3_d_30C</li><li>X861.YPD_5_d_30C</li><li>X862.Amino.acid...adenine.starvation.0.5.h</li><li>X863.Amino.acid...adenine.starvation.1.h</li><li>X864.Amino.acid...adenine.starvation.4.h</li><li>X865.Amino.acid...adenine.starvation.6.h</li><li>X90.cdc15.120.min</li><li>X906.w303a.vs.w303a.hcm1</li><li>X91.cdc15.140.min</li><li>X92.cdc15.160.min</li><li>X93.cdc15.180.min</li><li>X94.cdc15.200.min</li><li>X942.starv_in_H2O_1_h_30C</li><li>X943.starv_in_H2O_2_h_30C</li><li>X944.starv_in_H2O_4_h_30C</li><li>X95.cdc15.230.min</li><li>X96.cdc15.240.min</li><li>X961.1.mM.Menadione..20.min..redo</li><li>X962.1.mM.Menadione..30.min..redo</li><li>X963.1.mM.Menadione..120.min.redo</li><li>X964.1.mM.Menadione..160.min..redo</li><li>X974.1.mM.Menadione..80.min..redo</li><li>X977.wt_plus_gamma_10_min</li><li>X978.wt_plus_gamma_20_min</li><li>X979.wt_plus_gamma_30_min</li><li>X980.wt_plus_gamma_45_min</li><li>X9832.cdc15.080.min</li><li>X9836.cdc15.220.min</li><li>X9837.CLB2.induction.40minutes..possible.against.CLB5.0min.</li><li>X984.MHY1..crt1..vs..CRY1..wild.type....log.phase</li><li>X985.constant.0.32.mM.H2O2..20.min..redo</li><li>X986.constant.0.32.mM.H2O2..30.min..redo</li><li>X988.constant.0.32.mM.H2O2..60.min..redo</li><li>X990.constant.0.32.mM.H2O2..100.min..redo</li><li>X991.constant.0.32.mM.H2O2..120.min..redo</li><li>X992.constant.0.32.mM.H2O2..160.min..redo</li><li>X993.constant.0.32.mM.H2O2..80.min..redo</li> </ol> </div> </div> <p><a href="#bicluster034_genes" onclick="toggleVisible('bicluster034_genes'); return false;">[+]</a> Show/hide bicluster #34 rows (genes).</p> <div id="bicluster034_genes" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 34 genes</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">23</span> <div class="gaggle-namelist"> <ol> <li>YBR212W</li><li>YDR148C</li><li>YDR178W</li><li>YDR254W</li><li>YDR313C</li><li>YEL012W</li><li>YGL010W</li><li>YGR161C</li><li>YGR243W</li><li>YHR096C</li><li>YIR016W</li><li>YJL066C</li><li>YJL103C</li><li>YJL141C</li><li>YJL142C</li><li>YJL163C</li><li>YJL164C</li><li>YKL171W</li><li>YLL020C</li><li>YLR149C</li><li>YNL115C</li><li>YNR001C</li><li>YOR215C</li> </ol> </div> </div> <p><a href="#bicluster034_short_names" onclick="toggleVisible('bicluster034_short_names'); return false;">[+]</a> Show/hide bicluster #34 rows (short gene names).</p> <div id="bicluster034_short_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 34 short names</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">23</span> <span class="gaggle-namelist-tag hidden">short_name</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color: green; border-collapse: collapse" border="1"> <tr> <td>YBR212W</td><td class="short_name">NGR1</td></tr> <tr> <td>YDR148C</td><td class="short_name">KGD2</td></tr> <tr> <td>YDR178W</td><td class="short_name">SDH4</td></tr> <tr> <td>YDR254W</td><td class="short_name">CHL4</td></tr> <tr> <td>YDR313C</td><td class="short_name">PIB1</td></tr> <tr> <td>YGL010W</td><td class="short_name"></td></tr> <tr> <td>YGR161C</td><td class="short_name">RTS3</td></tr> <tr> <td>YGR243W</td><td class="short_name">FMP43</td></tr> <tr> <td>YHR096C</td><td class="short_name">HXT5</td></tr> <tr> <td>YIR016W</td><td class="short_name"></td></tr> <tr> <td>YJL066C</td><td class="short_name">MPM1</td></tr> <tr> <td>YJL103C</td><td class="short_name">GSM1</td></tr> <tr> <td>YJL141C</td><td class="short_name">YAK1</td></tr> <tr> <td>YJL142C</td><td class="short_name"></td></tr> <tr> <td>YJL163C</td><td class="short_name"></td></tr> <tr> <td>YKL171W</td><td class="short_name"></td></tr> <tr> <td>YLL020C</td><td class="short_name"></td></tr> <tr> <td>YLR149C</td><td class="short_name"></td></tr> <tr> <td>YNL115C</td><td class="short_name"></td></tr> <tr> <td>YNR001C</td><td class="short_name">CIT1</td></tr> <tr> <td>YOR215C</td><td class="short_name">AIM41</td></tr> <tr> <td>YEL012W</td><td class="short_name">UBC8</td></tr> <tr> <td>YJL164C</td><td class="short_name">TPK1</td></tr> </table> </div> <p><a href="#bicluster034_long_names" onclick="toggleVisible('bicluster034_long_names'); return false;">[+]</a> Show/hide bicluster #34 rows (long gene names).</p> <div id="bicluster034_long_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 34 long names</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">23</span> <span class="gaggle-namelist-tag hidden">long_name</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color:green; border-collapse: collapse" border="1"> <tr> <td>YBR212W</td><td class="long_name">RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation; overexpression impairs mitochondrial function; expressed in stationary phase</td></tr> <tr> <td>YDR148C</td><td class="long_name">Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA in the TCA cycle; phosphorylated</td></tr> <tr> <td>YDR178W</td><td class="long_name">Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone</td></tr> <tr> <td>YDR254W</td><td class="long_name">Outer kinetochore protein required for chromosome stability, interacts with kinetochore proteins Ctf19p, Ctf3p, and Iml3p; exhibits a two-hybrid interaction with Mif2p; association with CEN DNA requires Ctf19p</td></tr> <tr> <td>YDR313C</td><td class="long_name">RING-type ubiquitin ligase of the endosomal and vacuolar membranes, binds phosphatidylinositol(3)-phosphate; contains a FYVE finger domain</td></tr> <tr> <td>YGL010W</td><td class="long_name">Putative protein of unknown function; YGL010W is not an essential gene</td></tr> <tr> <td>YGR161C</td><td class="long_name">Putative component of the protein phosphatase type 2A complex</td></tr> <tr> <td>YGR243W</td><td class="long_name">Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies</td></tr> <tr> <td>YHR096C</td><td class="long_name">Hexose transporter with moderate affinity for glucose, induced in the presence of non-fermentable carbon sources, induced by a decrease in growth rate, contains an extended N-terminal domain relative to other HXTs</td></tr> <tr> <td>YIR016W</td><td class="long_name">Putative protein of unknown function; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; YIR016W is a non-essential gene</td></tr> <tr> <td>YJL066C</td><td class="long_name">Mitochondrial membrane protein of unknown function, contains no hydrophobic stretches</td></tr> <tr> <td>YJL103C</td><td class="long_name">Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis</td></tr> <tr> <td>YJL141C</td><td class="long_name">Serine-threonine protein kinase that is part of a glucose-sensing system involved in growth control in response to glucose availability; translocates from the cytoplasm to the nucleus and phosphorylates Pop2p in response to a glucose signal</td></tr> <tr> <td>YJL142C</td><td class="long_name"></td></tr> <tr> <td>YJL163C</td><td class="long_name">Putative protein of unknown function</td></tr> <tr> <td>YKL171W</td><td class="long_name">Putative protein of unknown function; predicted protein kinase; implicated in proteasome function; epitope-tagged protein localizes to the cytoplasm</td></tr> <tr> <td>YLL020C</td><td class="long_name"></td></tr> <tr> <td>YLR149C</td><td class="long_name">Putative protein of unknown function; YLR149C is not an essential gene</td></tr> <tr> <td>YNL115C</td><td class="long_name">Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YNL115C is not an essential gene</td></tr> <tr> <td>YNR001C</td><td class="long_name">Citrate synthase, catalyzes the condensation of acetyl coenzyme A and oxaloacetate to form citrate; the rate-limiting enzyme of the TCA cycle; nuclear encoded mitochondrial protein</td></tr> <tr> <td>YOR215C</td><td class="long_name">Putative protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays altered rate of mitochondrial loss and reduced growth rate in minimal glycerol media</td></tr> <tr> <td>YEL012W</td><td class="long_name">Ubiquitin-conjugating enzyme that negatively regulates gluconeogenesis by mediating the glucose-induced ubiquitination of fructose-1,6-bisphosphatase (FBPase); cytoplasmic enzyme that catalyzes the ubiquitination of histones in vitro</td></tr> <tr> <td>YJL164C</td><td class="long_name">cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; inhibited by regulatory subunit Bcy1p in the absence of cAMP; partially redundant with Tpk2p and Tpk3p</td></tr> </table> </div> <p><a href="#bicluster034_refseq_names" onclick="toggleVisible('bicluster034_refseq_names'); return false;">[+]</a> Show/hide bicluster #34 rows (NCBI RefSeq gene IDs).</p> <div id="bicluster034_refseq_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 34 NCBI RefSeq IDs</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">23</span> <div class="gaggle-namelist"> <ol> <li>NP_009771</li><li>NP_010432</li><li>NP_010463</li><li>NP_010540</li><li>NP_010599</li><li>NP_010904</li><li>NP_011505</li><li>NP_011677</li><li>NP_011759</li><li>NP_011964</li><li>NP_012281</li><li>NP_012371</li><li>NP_012372</li><li>NP_012394</li><li>NP_012432</li><li>NP_012469</li><li>NP_012750</li><li>NP_013250</li><li>NP_014284</li><li>NP_014398</li><li>NP_014858</li><li>NP_058165</li><li>NP_058166</li> </ol> </div> </div> <p><a href="#bicluster034_upstream_seqs" onclick="toggleVisible('bicluster034_upstream_seqs'); return false;">[+]</a> Show/hide bicluster #34 gene upstream sequences.</p> <div id="bicluster034_upstream_seqs" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 34 upstream sequences</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">21</span> <span class="gaggle-namelist-tag hidden">upstream</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color:green; border-collapse: collapse" border="1"> <tr> <td>YBR212W</td><td class="upstream">TGCGTGTTATATCCTAGTTCCAAATATTCTGATTTCTCGTGATCGAATCTGTTATATTGTCATATATTGTAATTCCATTTTTTTCCCGGTTCATTTTTTGATATTCTCTTCCTGTTCCAATATTAATAAAGGAGGCTTTTTTCTTTCCCTTTCGTTCTGATTTATATTGTTTTTACTATTATTGGATCTTTTAAATATTACAGCTTTTTCATATCCTTCGCCATCGATTTTTGCCTGAAAAATTTACACAAATGATGTCTAACGTTGCTAACGCCTCCCAA</td></tr> <tr> <td>YDR148C</td><td class="upstream">AGGGCTCGGATCCACACTTGGTCTATCAGCAAATGCAAATCCTTTTTCCCTCAACTAGGCCTACTTTTCATATATAATCTCTTTTTGAGCTTCAGGGGAGGAAATATCTAACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGCAGCTATCTTTAACGGTATATATCAGTGAATAGATATATTGTTATAAACTTCACTACCACATTTGTTACAACCAAAGACACAACTTCAGATAATTATTTAAACAATGCTTTCCAGAGCGACGCGTACTGCAGCT</td></tr> <tr> <td>YDR178W</td><td class="upstream">TGTGCCATAAGCATTGAGCCAATCGCTGCTGNNNNNNNNATTCCGGGGCACCTTCGGAAGAACACAGGCGCAATTTAGTTATATAAGGAGAAGCCCTCGAGCGATCAGGGGACCGACTGCGGATCGCTTTAAGGCAAAGATAGAAGGATAAATATCTGCTTTGGAAGATAGTCGTATCTAATTTCCCATTCTGTTGTTTTCTTGATCTTTCCTACGCTTTCGACTTTCTTCCTACGCGCTTTATAATAGCTATGATGTTGCCAAGATCCATGAAATTTATG</td></tr> <tr> <td>YDR254W</td><td class="upstream">TTATTATTGTCAAGAAAATATAAACTGTGGCGTACTAAGCGTACTAAGTAAGGGACGAAAAACCATCACAAAATGTCACGTGCATGTTAGTCCAGTCGGGCAATAGATAGGGACTGTAAATTAAAGTTTATATTGAAATAAACAAAGGTAAATGGTAAAAGATTAGAAGCATAGAAAGCATCTGGCGTTATTTTAGCGGGGAAAGATTTTGGTGGATACTATCTTTGACTAGTATATTTGAGTAGCAATTAATGTCTAACGAATTACGGCTTGAAGATAAC</td></tr> <tr> <td>YDR313C</td><td class="upstream">TAATCATATCTCTGGAGAAGGAAATCTTCGATAAGGGCCAGTGAAATAGCGGAGTATCATGGAATCCGGGTAATGGGCATCGAAGCAGCTCACCGAAGAGAAGAATAGAAAAGAAAAAGTAGAACTATTCTCGGGATTTATAGTAAACAGGGGACGGACGATTAAGAAATAACCTGATCAAACACTGTACACTACTGCTGNNNNNNNNNNNNNNNNNCTGCTAGAAAAGAACATATGAAGAACTAAAGCGCATGGTTATTAAAGAGGACTGTATCAATAAT</td></tr> <tr> <td>YGL010W</td><td class="upstream">GATTTAGCATGAAGATTATAATGAGTTAGCCATTTAACTTACTCTATCCTTACGGTGGCAAATTGGTGTGTGCCCTTCGTCTATTGTGATATCATAATTAAGGATCGCGATTACCATTATAAGAGGATGGGGAAAAGGAATGCCAAGGTAAATCCAGGAAAGTGAAACTTGGGAGTTTGTTTGGAGGATATGTATATAAATATACGAGGTTTTGAGAATATAGTCTCTTCTTCTGTTATAAAAGAATAAATATGGGCGAAGGTTTGCTGGATTTAAGATCT</td></tr> <tr> <td>YGR161C</td><td class="upstream">AACGATCATAGCTGGCTATTGTTATCGTTGGCTTAGATGGTTTCGCCCGTACAAAAATAGACTTGCATATATATAAAGCTTATCTTCGGCCTCAGTCGTCTAAAAAACTATCTTGCCTAACATTATCTTGTCTTCTTTTCGTTCCCTTGAATCATATATAAGAAAAGATAATCAATCATTCGGCTATTTTCTTACAGATACATACATACGTATAATTCATCAATCATAGCATTAATAGAAGATAAAGTATAATGATCGCTACCTCCAGAGCCGTAAACATG</td></tr> <tr> <td>YGR243W</td><td class="upstream">GCCGCTCCCTGGTTTGGTCACGCAAAACCGAAAGGCTCAAACAAAACTAAGGCCATCATATATATATATGCGGCTGCGTGCGTGTATTCTCCCGGATAATATGGTGCGTTGCAATTGGAGTATTGGAGAAAATTTTCTTTTCCCTTTCATTACGGCGGAAATACTTCATATNNNNNNNNNGAATACAATCAGTCTTTAAGACTATACGCATAAGCATTCAAGACACATAGAAACACAAACCTATATTTTTAATGTCAGCATCAGCTTTTAATTTTGCCTTT</td></tr> <tr> <td>YHR096C</td><td class="upstream">AAGTTTGGTTTCTTTTTGATTTCACGTATAAAAGAGTCTCTCTCTTTTCTTTTCATGCTAGTCGAACGGTTCTCCCTCTAAGAATAAGAAACTATCAAAAGAAAGAGAAAAGTCGATTGAATAATTTTTCTATATATAATATACGCAAACAAGATTCGCTTTCACTTTGCAATTTTACTTCATAGCTTTGTTAAAACCAGCAAAAAATATTATTTTTCTAGAAAAAAGAATATATTAGAGGTAAAGAAAGAATGTCGGAACTTGAAAACGCTCATCAAGGC</td></tr> <tr> <td>YIR016W</td><td class="upstream">TCTTAGGGTTATTGGTAGGGTTTTGGACCAATGTTTTGAGCAGGACAAAAATGCGGAGTTTCCAGATTTTCTTTAAGAGCCGACCCCCCACCCCCTTGCCCCTATACATGGGGTACGTGCCTGTATTTTGAGGGAAAACTACGACATAAAACACAGGGAAAAAAACGAGACGCCCGTTTGAAGAAGGTAATGTAGGATTCCGTCTTGCCAGCATAGCGGATAAACACCGCAAGGAGGTGTTGTGGTCGGTAATGAGTGGCACGAGGTGTTTGCTAGGCGTC</td></tr> <tr> <td>YJL066C</td><td class="upstream">GCCCAACATTGTCGAGATTGATCTTGATAATGACGAAGACGACGACGAAGACGTTACTGATCAAGAATAACTACACAAGCACATTGCATAGAAGGATTTTTCTTCTCTCTCTCACGATCTGTAGAACAACATAGTTTCTTTATACGTTAATTAAGTAAAGGGGNNNNNNNNNNTATTAAGCCTTGAATTTAGGAGGTTACAAACGAAAAGGACAAGAAAGACAAAGGAAACCGACAAACCGTTTACTCGATATGGGCTTTTATGAAGGCGATGACAATGAT</td></tr> <tr> <td>YJL103C</td><td class="upstream">AAAATTGTCGAAATGAGAAGAGGCTGAAACGATTTACTAATCATCATAGCCTGCTTAAACGAGTTAACACTAAGGGGAAGGGTACGACTATCATTTGTTCGGATCTCTGAACCGGATATTTTCTTTGTTACACACATCAAGTTTTTGCATGAATAGATCATATTTCGAATGATTTAACGTATTACAGCTTAGCAATAAAGGGAGTAAAGAAATAATATATTTGGATACAGCATACAAGAATATATATACATATGACCAAAAAACTACCTTCAGAGTTGAAA</td></tr> <tr> <td>YJL141C</td><td class="upstream">CGCCCCTTCTGAACCATTGCAAGCAATGCCCCCTCCTCAGATTTACCCCTTCTGGGCTGAACAATGAATGAGTCGCAATGCTAAACAGATATAAGGAAACAATTGGTGGGCCATTACTGGGGGTATTACACAAATTTCTCACTATTAGATTTGGGAATATATCGAAAGAAGAATTTTGGTGAAGAGCAACAGCCATTGTGCAAGGGAACATAATTTCGTTATCTTTTTTTCACATGCTAATTTGAGCAATCATGAACTCATCCAATAATAACGACTCGTCC</td></tr> <tr> <td>YJL163C</td><td class="upstream">TCATCAGGTAAGTACAGTGTATCTTACTAACATTGGCCGAGCGTTTATTGTTGTTCCGTGGAAGTTTATCATGATTTCCCGCCCTTAATCGAAATCNNNNNNNNNNNNNNTAAAGGGTAAGGGATTCCTAAAAACCAACAAGATGAAGGGCTGATCTGCAAGAAGTCTAATAGACTTATAAGGAATACAAACCCTAGTTCTTGCATTTCACGTATACATCTTCAAACCGTGCGAAGCAAAGGCGCAGAACAATGTCAAACGAGGATGAAACAACTCGTTTA</td></tr> <tr> <td>YKL171W</td><td class="upstream">CCTAGCGCCGGCGCTAATATTAATGGCCGGAATGAAAAGGTCCCGGAACTTTGTGTATGGCGTTGCGCTCTTCCTGTGAGTGGGGGGAAACAGATTAGATAATTGAATTCAATAACAACAGTCAATGGGGGACGGAGGGTCTTATGTTCCCTTTGGGTCATCGGGGACGCAAGTAAGAAGATACGCAATCAGCAAGCGCTGTTATTACTCTAACGAAGAAATCTTTTCAGCAAAACGGTCCAAAAGAACGAATGTTTACGTCGCAGCGACAGCTTCGACAA</td></tr> <tr> <td>YLR149C</td><td class="upstream">TGGTAGCGCCATATGTTATACGGCTACAACTTTGTGTCACGTGACATTGAACGGCTTTAAAGCGGAGTATGATCTCTTTTCTGAGGCAATAAGGGGTGATGATCAGAAAGTGAGGAGGAGGAGACTCTGGATTAAAAGCCTATTACAACTTTATTCTAGTACAAAACTTTTGCTGATTAAGCAACGACAAGTAAGATCGAATAAAGTGGTAGAAAAACAGCAATAAGTTACAAAAGTATACGTGTTAAAGAATGACCATTGATGGCACGGGGCAATCTAAG</td></tr> <tr> <td>YNL115C</td><td class="upstream">AAGTTGTCGAATCAGCAATCGTATTGGTCAACCTTGATGGCATGTTCTCAGCACGTTTTGAAGTGGCTATGCATATATAGTGTTCTTTAATCTATTCCTTGCAAGGCTATTCGGACCCCTAATTTTAACCATCGTGCAGTTTAAAGGGATGAGAGAAAAACTAAAAGTTAGATGCCTTGCTATATTCTATAAGGAGGAAAGGAAAGGAAAGCCATTGAAGAAAGAACTGTAGGCATCAGAGCGAACAGATCATGAAGGCTAATGGTTTAGATAATGATCCG</td></tr> <tr> <td>YNR001C</td><td class="upstream">GACTTATCCGACCTCTTGTTGTTTGAAAATGTCAATTGATATCCATCCATTATATAAATGCTCAAAACTTGCAGCAACTATTCTTTACCCTTCCCCTGTTATGGATTGCTAGTCTTAAGGGGGAAATTTGCTGTTTACTAAAATACAAACCAGGTTTGTTTTGGCTTTTATTTGCATTTAAGTAATTACAATTACAACCATTAAAAAGAAAATAAGGCAAAACATATAGCAATATAATACTATTTACGAAGATGTCAGCGATATTATCAACAACTAGCAAA</td></tr> <tr> <td>YOR215C</td><td class="upstream">AAAGACTAATCGGGCAAACTAAGTCTAGTTCAGAAGAGCATACGTACTTAGTGTAGCATCACCCAATTTATACTCTATAAACGATAAATGATATAAATCACATCTACCCGGCATCTGGGACTTTTCGGGGGGAAGGACTCAAAATTAAAGGGAAGAAAAAGGATCTGCAACATTTTTTACAGAAGTAATGAACTGGAGAAAAAAGACTTTGGGATAAAGTTGGGGAATACAGCAAATAACACTATTCCAAGATGTTCAGACAATCAATTAGGCCACTTGTT</td></tr> <tr> <td>YEL012W</td><td class="upstream">CTTCGTCCACCGGGTAATGCTCCCGGAGCAGTGGAATTNNNNNNNNNNNGGGTGAGCACCGGAAACAGCTATCTGCGCTTAAGTATCACTAACGTAAAGCATAGGTAGGATTTCCAGTTCTGCCACATTTGATAAATAGTGTAATCCGTAATTATCAAGCGAGATAGTTTTCGAATATAATTTAGAAGTAAGAGCAAAATATTAATAGTATTTCATAAGGAATATTGGAAGAAAGGAGCGTAATACGAAAGATGAGGTATGTTTGATAAGATATATACGTA</td></tr> <tr> <td>YJL164C</td><td class="upstream">ATATTCATCTACTATCTCTGGCCAGAAAAACGTGAGAATTTTTAGGTGCGAAACATCATAGAAGCTGCGATTGTATCCATCTAAGAGTTTTAATTTGATAAAGCTAAGGAATCTGACCCCTATACNNNNNNNNNNGTTTGGCTTGCTTGCATTTTCAATCGGCTTCAAAGGTAGCACAGAAAGTAGTGTTCTCTTAGCTTAAGCAGTGCATGAATTATAGCTGATTGTGTGAAAGAATCNNNNNNNNGGGTATGTCGACTGAAGAACAAAATGGAGGTGGT</td></tr> </table> </div> <p><a href="#bicluster034_arrays" onclick="toggleVisible('bicluster034_arrays'); return false;">[+]</a> Show/hide bicluster #34 columns (arrays; conditions).</p> <div id="bicluster034_arrays" style="display:none;" class="gaggle-data arrays"> <span class="gaggle-name hidden">bicluster 34 arrays</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">445</span> <div class="gaggle-namelist"> <ol> <li>X1009.YPD.2.h..25C.</li><li>X1012.YPD.12.h..25C.</li><li>X1015.YPD.3.d..25C.</li><li>X1016.YPD.5.d..25C.</li><li>X1017.YPD.7.d..25C.</li><li>X1018.YPD.13.d..25C.</li><li>X103.alpha.factor.release.sample026</li><li>X104.alpha.factor.release.sample024</li><li>X106.heat.shock.05.min</li><li>X107.heat.shock.10.min</li><li>X109.heat.shock.20.min</li><li>X1097.alpha.factor.release.sample020</li><li>X1103.alpha.factor.release.sample028</li><li>X1106.DY.zap1.3.mM.vs..76.nM.zinc</li><li>X1107.alpha.factor.release.sample025</li><li>X1108.DY.zap1.3.mM.vs..10.uM.zinc..2</li><li>X1139.DY1457..wild.type..3.mM.vs..76.nM.zinc</li><li>X11466.yO1.test.hyb</li><li>X115.heat.shock.20.min.repeat</li><li>X1155.DY1457..wild.type..3.mM.vs..10.uM.zinc</li><li>X1167.NBW7.strain.low.Pi.vs..High.Pi..exp.1</li><li>X1168.PHO81c.vs..wild.type..exp.1</li><li>X117.heat.shock.60.min</li><li>X1170.pho85.delete.vs..wild.type</li><li>X1172.pho80.mutant.vs.wild.type</li><li>X1173.PHO4c.vs..wild.type</li><li>X118.heat.shock.80.min</li><li>X11826.Pomona.College.Bio164..WT.dna2.2.mRNA</li><li>X11827.Pomona.College.Bio164..WT.dna2.1</li><li>X11828.Pomona.College.Bio164..WT.rad27.mRNA</li><li>X120.w303a.vs.w303a.fkh1.fkh2</li><li>X12169.aft2.minus.cells.with.control.plasmid.vs.aft2.minus.cells.with.AFT2.vector</li><li>X12182.Swarthmore.College..sid2.37Cplus.wt.37C</li><li>X12361.Swarthmore.College.sid2.mutant</li><li>X1249.mec1_plus_gamma_5_min</li><li>X1251.mec1_plus_gamma_20_min</li><li>X1252.mec1_plus_gamma_30_min</li><li>X1253.mec1_plus_gamma_45_min</li><li>X1254.mec1_plus_gamma_60_min</li><li>X1255.mec1_plus_gamma_90_min</li><li>X1257.mec1_plus_gamma_120_min</li><li>X1258.DBYyap1...37degree.heat..repeat.</li><li>X12592.Muhlenberg.College.Bio550..tolnaftate.treatment</li><li>X12598.Muhlenberg.College.Bio550..increased.salt.concentration</li><li>X12732.Nitrogen.Depletion.4.h</li><li>X12736.Nitrogen.Depletion.1.d</li><li>X12739.Nitrogen.Depletion.30.min.</li><li>X12741.Nitrogen.Depletion.1.h</li><li>X12742.Nitrogen.Depletion.2.h</li><li>X12801.DBYmsn2msn4..good.strain....0.32.mM.H2O2</li><li>X1301.PHO81c.vs..wild.type..exp.2</li><li>X1302.diauxic.shift.timecourse..15.5.hr</li><li>X13057.wt.crz1.Na.30min..1.</li><li>X13059.wt.crz1.Na.45min..1.</li><li>X13060.wt.crz1.Na.45min..2.</li><li>X13063.wt.crz1.Ca.30min..1.</li><li>X13064.wt.crz1.Ca.30min..2.</li><li>X13066.Na.Na.FK.30min..2.</li><li>X13067.Na.Na.FK.45min..1.</li><li>X13093.Missouri.Western.State.College.10.uM.DAPI.Cy3.4.hrs..exp.1.</li><li>X13095.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.1.</li><li>X13096.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.2.</li><li>X1311.diauxic.shift.timecourse..11.5.hr</li><li>X1312.diauxic.shift.timecourse..13.5.hr</li><li>X13133.Ca.Ca.FK.30min..2.</li><li>X13490.Y5.mRNP.vs..Poly</li><li>X13504.Univ..of.So..Colo..AAP1.</li><li>X14711.Ca.5min..1.</li><li>X14712.Ca.15min..1.</li><li>X14731.Mount.Saint.Mary.s.College..MD..hst3.hst4..v..wt</li><li>X14732.Univ..of.So..Colo..Wild.Type</li><li>X14761.Ca.30min..1.</li><li>X14763.Ca.60min..1.</li><li>X14946.Hydrostatic.pressure..C2.vs.P2.</li><li>X14947.Hydrostatic.pressure..C1.vs.P1.</li><li>X15183.Ca.FK.5min..3.</li><li>X15184.Ca.FK.5min..2.</li><li>X1562.NBW7.strain.High.Pi.vs..Low.Pi..exp.2</li><li>X15636.Ca.FK.30min..2.</li><li>X15638.Ca.FK.60min..2.</li><li>X15726.Lycoming.College...minimal.vs..rich.medium</li><li>X15727.Lycoming.College...X.ray.exposure.vs..control</li><li>X15728.Lycoming.College...peroxide.vs..control</li><li>X15729.Lycoming.College...AICAr.vs..no.purine</li><li>X16514.DES.genomic.DNA.vs..MHY26..dun1..genomic.DNA..correct.version.</li><li>X1662.cdc15.030.min</li><li>X1665.cdc15.150.min</li><li>X1666.CLN3.induction.40.minutes</li><li>X1668.cdc15.130.min</li><li>X1673.alpha.factor.release.sample021</li><li>X1674.Elutriation2.Sample2.Time5.5hrs</li><li>X1679.Elutriation2.Sample2.Time6.0hrs</li><li>X1686.YP.raffinose.vs.reference.pool</li><li>X17473.Ca.FK.30min..5.</li><li>X17677.Na.FK.60min..4.</li><li>X17691.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.3.</li><li>X17694.Missouri.Western.State.College.10.uM.DAPI.Cy5.12.hrs..exp.2.</li><li>X17695.Missouri.Western.State.College.Galactose.Cy5..exp.1.</li><li>X18418.2mM.MD.170min</li><li>X18421.2mM.MD.140min</li><li>X18423.2mM.MD.000min</li><li>X18424.2mM.MD.055min</li><li>X18425.2mM.MD.040min</li><li>X18427.2mM.MD.020min</li><li>X18428.2mM.MD.030min</li><li>X18429.2mM.MD.210min</li><li>X18430.2mM.MD.014min</li><li>X18431.2mM.MD.070min</li><li>X18432.2mM.MD.077min</li><li>X18433.2mM.MD.085min</li><li>X18434.2mM.MD.100min</li><li>X2064.Hypo.osmotic.shock...5.min</li><li>X2108.cdc15.210.min</li><li>X2141.Elutriation2.Sample2.Time1.0hrs</li><li>X2142.cdc15.110.min</li><li>X2144.heat.shock.37.to.37..30.minutes</li><li>X21628..24.mM.H2O2..105.minutes</li><li>X21631..24.mM.H2O2..190.minutes</li><li>X21632..24.mM.H2O2..250.minutes</li><li>X21634..24.mM.H2O2..155.minutes</li><li>X21638..24.mM.H2O2..070.minutes</li><li>X21641..24.mM.H2O2..112.minutes</li><li>X21643..24.mM.H2O2..140.minutes</li><li>X21645..24.mM.H2O2..020.minutes</li><li>X21648..24.mM.H2O2..030.minutes</li><li>X21650..24.mM.H2O2..040.minutes</li><li>X21654..24.mM.H2O2..275.minutes</li><li>X21661..24.mM.H2O2..049.minutes.redo</li><li>X21663..24.mM.H2O2..063.minutes.redo</li><li>X2554.Hypo.osmotic.shock..15.minutes</li><li>X2555.Hypo.osmotic.shock..30.minutes</li><li>X2558.1M.sorbitol.vs..YPD...basal</li><li>X2559.29C.to.33C...5.min</li><li>X2560.29C.to.33C...15.min</li><li>X27094.P1Comp.09.hr.10.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27095.P1Comp.05.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27096.P1Comp.19.hr.6.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27097.P1Comp.11.hr.10.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27098.P1Comp.13.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27099.P1Comp.15.hr.0.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27100.P1Comp.16.hr.55.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27101.P1Comp.07.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27102.P1Comp.21.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27103.P1Comp.24.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27105.P1Comp.27.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X27108.P1Comp.45.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison</li><li>X28838.P2Comp.06.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28842.P2Comp.08.hr.48.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28844.P2Comp.09.hr.36.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28845.P2Comp.09.hr.49.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28847.P2Comp.10.hr.20.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28849.P2Comp.10.hr.50.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28851.P2Comp.11.hr.51.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28852.P2Comp.12.hr.22.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X28857.P2Comp.25.hr.43.min.Phosphate.Batch.vs.Chemostat.Comparison2</li><li>X29.alpha.factor.release.sample016</li><li>X2964.WT.vs.lpz8.null.cells.in.low.Cu.repeat</li><li>X2966.WT.vs.Lpz8.null.cells.in.high.Cu.repeat</li><li>X297.Kb.vs..Ctrl</li><li>X298.Tunicamycin.vs..Ctrl</li><li>X3020.WT.vs.lpz8.null.cells.in.high.Cu</li><li>X3022.WT.vs.lpz8.null.cells.in.low.Cu</li><li>X30462.Pomona.Brown.Sir3xpol2.12.red</li><li>X30463.Pomona.Brown.pol2.12.red</li><li>X30464.Rich.vs..Minimal.II</li><li>X32250.DBY8778_heat_shock2_0min</li><li>X32251.DBY8778_heat_shock2_5min</li><li>X32255.DBY8778_heat_shock2_60min</li><li>X32622.S1Comp.05.hr.10.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32624.S1Comp.07.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32626.S1Comp.08.hr.55.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32628.S1Comp.12.hr.57.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X32629.S1Comp.15.hr.20.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X33261.delKIN82_heat.shock._30min</li><li>X33361.delKin82.DBY10089..vs..wt..DBY8778.</li><li>X33771.DBY8778.wt._stationary_phase_0hours</li><li>X33772.DBY8778.wt._stationary_phase_3hours</li><li>X33773.DBY8778.wt._stationary_phase_5hours</li><li>X33774.DBY8778.wt._stationary_phase_7hours</li><li>X33777.delYPL230w_stationary_phase_0hours</li><li>X33778.delYPL230w_stationary_phase_2hours</li><li>X33779.delYPL230w_stationary_phase_5hours</li><li>X34346.delPPT1.DBY10090...vs..wt.DBY8778.</li><li>X34348.wt_hypo_osmotic_shock_7min</li><li>X34350.wt_hypo_osmotic_shock_30min</li><li>X34351.wt_hypo_osmotic_shock_60min</li><li>X34352.delPPT1_hypo_osmotic_shock_0min</li><li>X34353.delPPT1_hypo_osmotic_shock_7min</li><li>X34354.delPPT1_hypo_osmotic_shock_15min</li><li>X34355.delPPT1_hypo_osmotic_shock_30min</li><li>X34356.delPPT1_hypo_osmotic_shock_60min</li><li>X34359.batch.02X25.3</li><li>X34360.batch.02X25.4</li><li>X34365.batch.02X25.6</li><li>X34368.batch.02X25.7</li><li>X34872.S4Comp.05.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34874.S4Comp.06.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison..rescan.</li><li>X34878.S4Comp.09.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34881.S4Comp.11.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison..rescan.</li><li>X34883.S4Comp.14.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34884.S4Comp.15.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X34885.S4Comp.34.hr.20.min.Sulfate.Batch.vs.Chemostat.Comparison</li><li>X37.alpha.factor.release.sample018</li><li>X37279.CC.SP.1A..Sulfate.Phosphate.Chemostat.Comparison</li><li>X37281.CC.SP.3A..Sulfate.Phosphate.Chemostat.Comparison</li><li>X37282.CC.SP.1B..Sulfate.Phosphate.Chemostat.Comparison</li><li>X37285.CC.SP.3B..Sulfate.Phosphate.Chemostat.Comparison</li><li>X38146.03II01.batch.p2</li><li>X38147.03II01.batch.p3</li><li>X38149.03II01.batch.p5</li><li>X38151.03II01.batch.p7</li><li>X38153.03II01.batch.p9</li><li>X38156.03II01.batch.p12</li><li>X40.alpha.factor.release.sample029</li><li>X404.W303a.vs.GZY29.3b</li><li>X4048.0.8M.NaCl..FK506...30.min</li><li>X405.W303a.vs.GZY45.15c</li><li>X406.heat.shock.37.to.37..20.minutes</li><li>X407.heat.shock.33.to.37..20.minutes</li><li>X408.heat.shock.29.to.37..20.minutes</li><li>X409.heat.shock.25.to.37..20.minutes</li><li>X40946.H2O2_II_7_min</li><li>X40947.H2O2_II_14_min</li><li>X40949.H2O2_II_35_min</li><li>X40951.H2O2_II_49_min</li><li>X40952.H2O2_II_56_min</li><li>X40953.H2O2_II_63_min</li><li>X40954.H2O2_II_70_min</li><li>X40955.H2O2_II_77_min</li><li>X40957.H2O2_II_120_min</li><li>X40958.H2O2_II_140_min</li><li>X40960.H2O2_II_180_min</li><li>X40961.MD_II_0_min</li><li>X40962.MD_II_7_min</li><li>X40964.MD_II_21_min</li><li>X40965.MD_II_28_min</li><li>X40966.MD_II_35_min</li><li>X40967.MD_II_42_min</li><li>X40968.MD_II_49_min</li><li>X40969.MD_II_56_min</li><li>X40970.MD_II_63_min</li><li>X40972.MD_II_85_min</li><li>X40975.MD_II_130_min</li><li>X40976.MD_II_140_min</li><li>X41003.H2O2_II_0_min</li><li>X42.alpha.factor.release.sample022</li><li>X42045.L1CompR.05.hr.15.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42046.L1CompR.07.hr.05.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42047.L1CompR.09.hr.05.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42048.L1CompR.11.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42049.L1CompR.13.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42051.L1CompR.18.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42053.L1CompR.26.hr.40.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42055.U3Comp.05.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison..rescan.</li><li>X42057.U3Comp.07.hr.15.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42059.U3Comp.08.hr.08.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42062.U3Comp.10.hr.08.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42063.U3Comp.11.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42064.U3Comp.12.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42065.U3Comp.13.hr.30.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42066.U3Comp.25.hr.55.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42191.L2.Comp.05.hr.00.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42194.L2.Comp.07.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42197.L2.Comp.11.hr.04.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42198.L2.Comp.12.hr.03.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42199.L2.Comp.12.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42218.U2.Comp.05.hr.15.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42221.U2.Comp.06.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42224.U2.Comp.08.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison..rescan.</li><li>X42226.U2.Comp.10.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42227.U2.Comp.11.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42228.U2.Comp.12.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42229.U2.Comp.13.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42231.U2.Comp.31.hr.35.min.Uracil.Batch.vs.Chemostat.Comparison</li><li>X42369.CC.PU.3A.Phosphate.Uracil.Chemostat.Comparison</li><li>X42370.CC.PU.3B.Phosphate.Uracil.Chemostat.Comparison</li><li>X42373.CC.UL.3B.Uracil.Leucine.Chemostat.Comparison</li><li>X42375.CC.LS.3B.Leucine.Sulfate.Chemostat.Comparison</li><li>X42378.CC.PU.2A.Phosphate.Uracil.Chemostat.Comparison</li><li>X42379.CC.UL.2B.Uracil.Leucine.Chemostat.Comparison</li><li>X42380.CC.UL.2A.Uracil.Leucine.Chemostat.Comparison</li><li>X42381.CC.LS.2B.Leucine.Sulfate.Chemostat.Comparison</li><li>X42382.CC.LS.2A.Leucine.Sulfate.Chemostat.Comparison</li><li>X42383.CC.PU.1B.Phosphate.Uracil.Chemostat.Comparison</li><li>X42385.CC.PU.1A.Phosphate.Uracil.Chemostat.Comparison</li><li>X42386.CC.UL.1B.Uracil.Leucine.Chemostat.Comparison</li><li>X42390.CC.LS.1B.Leucine.Sulfate.Chemostat.Comparison</li><li>X42391.CC.LS.1A.Leucine.Sulfate.Chemostat.Comparison</li><li>X42392.L2.CompR.05.hr.00.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42394.L2.CompR.06.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42395.L2.CompR.07.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42396.L2.CompR.08.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42398.L2.CompR.09.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42399.L2.CompR.11.hr.04.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42400.L2.CompR.12.hr.03.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42401.L2.CompR.12.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42402.L2.CompR.24.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison</li><li>X42404.CC.PU.2B.Phosphate.Uracil.Chemostat.Comparison</li><li>X45181.Low.D.chemostat.vs..High.D.chemostat</li><li>X4781.DBYtrr1...0.3.mM.H2O2...30.min</li><li>X4782.DBYtrr1.vs..wild.type.DBY7286</li><li>X4784.29C.to.33C...90.min</li><li>X4785.29C..1M.sorbitol.to.33C...1M.sorbitol...15.min</li><li>X4787.29C..1M.sorbitol.to.33C...1M.sorbitol...30.min</li><li>X4789.33C...1M.sorbitol.vs..29C...adapted</li><li>X4872.1M.sorbitol...60.min</li><li>X50.Elutriation2.Sample2.Time0.5hrs</li><li>X512.2.5mM.DTT.005.min</li><li>X513.2.5mM.DTT.015.min</li><li>X514.2.5mM.DTT.030.min</li><li>X515.2.5mM.DTT.045.min</li><li>X516.2.5mM.DTT.060.min</li><li>X517.2.5mM.DTT.090.min</li><li>X518.2.5mM.DTT.120.min</li><li>X5187.MHY1..crt1..vs.CRY1..wild.type.</li><li>X519.2.5mM.DTT.180.min</li><li>X52.Elutriation2.Sample2.Time1.5hrs</li><li>X5239.DES460..wt....mock.irradiation...30.min</li><li>X5240.DES460..wt....mock.irradiation...60.min</li><li>X5242.DES460..wt....mock.irradiation...90.min</li><li>X5243.DES459..mec1....mock.irradiation...5.min</li><li>X5244.DES459..mec1....mock.irradiation..15.min</li><li>X5245.DES459..mec1....mock.irradiation...30.min</li><li>X53.Elutriation2.Sample2.Time2.0hrs</li><li>X5358.1M.sorbitol...5.min</li><li>X55.Elutriation2.Sample2.Time3.0hrs</li><li>X584.17.deg.growth</li><li>X585.21.deg.growth</li><li>X597.25.deg.growth</li><li>X634.Elutriation2.Sample2.Time6.5hrs</li><li>X6349.DES460...0.02..MMS...15.min</li><li>X6351.DES460...0.02..MMS...30.min</li><li>X6358.DES460...0.02..MMS...90.min</li><li>X6364.DES459..mec1.....0.02..MMS...15.min</li><li>X6672.wt...0.3.mM.H2O2...10.min</li><li>X6676.wt...0.3.mM.H2O2...30.min</li><li>X6679.trr...0.1.mM.H2O2...10.min</li><li>X6685.trr...0.3.mM.H2O2...10.min</li><li>X6688.trr...0.3.mM.H2O2...30.min</li><li>X680.YP.glucose.vs.reference.pool</li><li>X681.YP.galactose.vs.reference.pool</li><li>X6826.Sporulation.t2hrs</li><li>X6834.Sporulation.t5hrs</li><li>X6836.Sporulation.t7hrs</li><li>X684.YP.fructose.vs.reference.pool</li><li>X685.YP.sucrose.vs.reference.pool</li><li>X6854.Early.Sporulation.ndt80.delete</li><li>X6856.Sporulation.t30min</li><li>X6859.Mid.Sporulation.ndt80.delete</li><li>X686.YP.ethanol.vs.reference.pool</li><li>X692.DBYyap1....0.3.mM.H2O2..20.min.</li><li>X7530.DBY.msn2msn4.37C...20.min</li><li>X7535.25C....15.min</li><li>X7536.25C....30.min</li><li>X7537.25C....45.min</li><li>X7540.pRS.ROX1.GAL.media</li><li>X7541.DES459..mec1....log.phase..IR.time</li><li>X7542.DES459..mec1....log.phase..MMS.time</li><li>X7549.33C.no.sorbitol.5.min</li><li>X7759.Na.30min</li><li>X7761.Na.60min</li><li>X7762.Na.FK.15min</li><li>X7763.Na.FK.30min</li><li>X7764.Na.FK.45min</li><li>X7765.Na.FK.60min</li><li>X78.cdc.15.010.min</li><li>X79.cdc15.050.min</li><li>X797.Heat.Shock.000.minutes..series.3.</li><li>X7985.cdc47.1.ts.grown.at.34C.versus.37C</li><li>X80.cdc15.070.min</li><li>X800.Heat.Shock.015.minutes</li><li>X801.Heat.Shock.030inutes</li><li>X810.DES460..wild.type....heat.20.min</li><li>X811.DES459..mec1....heat.20.min</li><li>X812.1M.sorbitol...45.min....centrifugation.problem.</li><li>X814.DBYmsn2.4..37degree.heat...20.min</li><li>X815.1M.sorbitol...15.min</li><li>X8193.steady.state.15.dec.C</li><li>X8195.steady.state.21.dec.C</li><li>X8197.steady.state.25.dec.C</li><li>X8213.steady.state.36.dec.C</li><li>X8217.steady.state.17.dec.C</li><li>X8230.dtt.060.min</li><li>X8233.dtt.120.min</li><li>X8234.dtt.240.min</li><li>X8235.dtt.480.min</li><li>X827.wt.vs.zap1...61.nM.zinc</li><li>X8286.mcm1.1..pRS.MCM7.vs..wild.type...pRS.MCM7</li><li>X8289.MCM7.formaldehyde.x.linked.in.veg..cells..IP.d.w..polyclonal.AB</li><li>X8291.wt.pRS315.vs..wt.pRS.MCM7</li><li>X83.cdc15.160.min.repeat</li><li>X831.1.5.mM.diamide..20.min.</li><li>X834.1.5.mM.diamide..30.min.</li><li>X836.1.5.mM.diamide..40.min.</li><li>X838.1.5.mM.diamide..50.min.</li><li>X84.cdc15.190.min</li><li>X840.1.5.mM.diamide..60.min.</li><li>X842.1.5.mM.diamide..90.min.</li><li>X8524.DES459..mec1.....0.02..MMS...90.min</li><li>X8525.DES459..mec1.....0.02..MMS...120.min</li><li>X8526.dun1....0.02..MMs...30.min</li><li>X8528.dun1....0.02..MMS...90.min</li><li>X854.YPD_6_h_30C</li><li>X855.YPD_8_h_30C</li><li>X856.YPD_10_h_30C</li><li>X857.YPD_12_h_30C</li><li>X858.YPD_1_d_30C</li><li>X859.YPD_2_d_30C</li><li>X860.YPD_3_d_30C</li><li>X861.YPD_5_d_30C</li><li>X862.Amino.acid...adenine.starvation.0.5.h</li><li>X863.Amino.acid...adenine.starvation.1.h</li><li>X864.Amino.acid...adenine.starvation.4.h</li><li>X865.Amino.acid...adenine.starvation.6.h</li><li>X90.cdc15.120.min</li><li>X906.w303a.vs.w303a.hcm1</li><li>X91.cdc15.140.min</li><li>X92.cdc15.160.min</li><li>X93.cdc15.180.min</li><li>X94.cdc15.200.min</li><li>X942.starv_in_H2O_1_h_30C</li><li>X943.starv_in_H2O_2_h_30C</li><li>X944.starv_in_H2O_4_h_30C</li><li>X95.cdc15.230.min</li><li>X96.cdc15.240.min</li><li>X961.1.mM.Menadione..20.min..redo</li><li>X962.1.mM.Menadione..30.min..redo</li><li>X963.1.mM.Menadione..120.min.redo</li><li>X964.1.mM.Menadione..160.min..redo</li><li>X974.1.mM.Menadione..80.min..redo</li><li>X977.wt_plus_gamma_10_min</li><li>X978.wt_plus_gamma_20_min</li><li>X979.wt_plus_gamma_30_min</li><li>X980.wt_plus_gamma_45_min</li><li>X9832.cdc15.080.min</li><li>X9836.cdc15.220.min</li><li>X9837.CLB2.induction.40minutes..possible.against.CLB5.0min.</li><li>X984.MHY1..crt1..vs..CRY1..wild.type....log.phase</li><li>X985.constant.0.32.mM.H2O2..20.min..redo</li><li>X986.constant.0.32.mM.H2O2..30.min..redo</li><li>X988.constant.0.32.mM.H2O2..60.min..redo</li><li>X990.constant.0.32.mM.H2O2..100.min..redo</li><li>X991.constant.0.32.mM.H2O2..120.min..redo</li><li>X992.constant.0.32.mM.H2O2..160.min..redo</li><li>X993.constant.0.32.mM.H2O2..80.min..redo</li> </ol> </div> </div> <p><a href="#bicluster034_ratios" onclick="toggleVisible('bicluster034_ratios'); return false;">[+]</a> Show/hide bicluster #34 ratios.</p> <div id="bicluster034_ratios" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 34 ratios</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">23x445</span> <div class="gaggle-matrix-tsv"> GENES X32624.S1Comp.07.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison X34878.S4Comp.09.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison X855.YPD_8_h_30C X32255.DBY8778_heat_shock2_60min X34368.batch.02X25.7 X1673.alpha.factor.release.sample021 X2141.Elutriation2.Sample2.Time1.0hrs X30464.Rich.vs..Minimal.II X34350.wt_hypo_osmotic_shock_30min X40952.H2O2_II_56_min X8525.DES459..mec1.....0.02..MMS...120.min X14731.Mount.Saint.Mary.s.College..MD..hst3.hst4..v..wt X28844.P2Comp.09.hr.36.min.Phosphate.Batch.vs.Chemostat.Comparison2 X2560.29C.to.33C...15.min X5240.DES460..wt....mock.irradiation...60.min X37.alpha.factor.release.sample018 X406.heat.shock.37.to.37..20.minutes X18428.2mM.MD.030min X21631..24.mM.H2O2..190.minutes X42046.L1CompR.07.hr.05.min.Leucine.Batch.vs.Chemostat.Comparison X7536.25C....30.min X27108.P1Comp.45.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison X33261.delKIN82_heat.shock._30min X42053.L1CompR.26.hr.40.min.Leucine.Batch.vs.Chemostat.Comparison X90.cdc15.120.min X842.1.5.mM.diamide..90.min. X1103.alpha.factor.release.sample028 X14711.Ca.5min..1. X42045.L1CompR.05.hr.15.min.Leucine.Batch.vs.Chemostat.Comparison X17691.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.3. X21663..24.mM.H2O2..063.minutes.redo X8197.steady.state.25.dec.C X42402.L2.CompR.24.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison X9832.cdc15.080.min X40958.H2O2_II_140_min X42218.U2.Comp.05.hr.15.min.Uracil.Batch.vs.Chemostat.Comparison X42224.U2.Comp.08.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison..rescan. X42369.CC.PU.3A.Phosphate.Uracil.Chemostat.Comparison X84.cdc15.190.min X5242.DES460..wt....mock.irradiation...90.min X7542.DES459..mec1....log.phase..MMS.time X42399.L2.CompR.11.hr.04.min.Leucine.Batch.vs.Chemostat.Comparison X6672.wt...0.3.mM.H2O2...10.min X27094.P1Comp.09.hr.10.min.Phosphate.Batch.vs.Chemostat.Comparison X28847.P2Comp.10.hr.20.min.Phosphate.Batch.vs.Chemostat.Comparison2 X40976.MD_II_140_min X409.heat.shock.25.to.37..20.minutes X686.YP.ethanol.vs.reference.pool X1257.mec1_plus_gamma_120_min X2964.WT.vs.lpz8.null.cells.in.low.Cu.repeat X7540.pRS.ROX1.GAL.media X34881.S4Comp.11.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison..rescan. X11827.Pomona.College.Bio164..WT.dna2.1 X21650..24.mM.H2O2..040.minutes X943.starv_in_H2O_2_h_30C X14712.Ca.15min..1. X40961.MD_II_0_min X961.1.mM.Menadione..20.min..redo X27105.P1Comp.27.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison X38156.03II01.batch.p12 X42386.CC.UL.1B.Uracil.Leucine.Chemostat.Comparison X83.cdc15.160.min.repeat X408.heat.shock.29.to.37..20.minutes X33361.delKin82.DBY10089..vs..wt..DBY8778. X117.heat.shock.60.min X906.w303a.vs.w303a.hcm1 X4787.29C..1M.sorbitol.to.33C...1M.sorbitol...30.min X42228.U2.Comp.12.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison X15727.Lycoming.College...X.ray.exposure.vs..control X18434.2mM.MD.100min X42373.CC.UL.3B.Uracil.Leucine.Chemostat.Comparison X34351.wt_hypo_osmotic_shock_60min X858.YPD_1_d_30C X862.Amino.acid...adenine.starvation.0.5.h X865.Amino.acid...adenine.starvation.6.h X1009.YPD.2.h..25C. X5243.DES459..mec1....mock.irradiation...5.min X32629.S1Comp.15.hr.20.min.Sulfate.Batch.vs.Chemostat.Comparison X37281.CC.SP.3A..Sulfate.Phosphate.Chemostat.Comparison X38146.03II01.batch.p2 X40960.H2O2_II_180_min X42048.L1CompR.11.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison X42385.CC.PU.1A.Phosphate.Uracil.Chemostat.Comparison X12732.Nitrogen.Depletion.4.h X40.alpha.factor.release.sample029 X2966.WT.vs.Lpz8.null.cells.in.high.Cu.repeat X34352.delPPT1_hypo_osmotic_shock_0min X519.2.5mM.DTT.180.min X6826.Sporulation.t2hrs X93.cdc15.180.min X34874.S4Comp.06.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison..rescan. X1173.PHO4c.vs..wild.type X1666.CLN3.induction.40.minutes X40965.MD_II_28_min X34883.S4Comp.14.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison X814.DBYmsn2.4..37degree.heat...20.min X944.starv_in_H2O_4_h_30C X30463.Pomona.Brown.pol2.12.red X34346.delPPT1.DBY10090...vs..wt.DBY8778. X5239.DES460..wt....mock.irradiation...30.min X5244.DES459..mec1....mock.irradiation..15.min X8289.MCM7.formaldehyde.x.linked.in.veg..cells..IP.d.w..polyclonal.AB X38147.03II01.batch.p3 X40951.H2O2_II_49_min X52.Elutriation2.Sample2.Time1.5hrs X6836.Sporulation.t7hrs X42381.CC.LS.2B.Leucine.Sulfate.Chemostat.Comparison X4782.DBYtrr1.vs..wild.type.DBY7286 X17695.Missouri.Western.State.College.Galactose.Cy5..exp.1. X42055.U3Comp.05.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison..rescan. X42390.CC.LS.1B.Leucine.Sulfate.Chemostat.Comparison X94.cdc15.200.min X40957.H2O2_II_120_min X40962.MD_II_7_min X4048.0.8M.NaCl..FK506...30.min X8234.dtt.240.min X15183.Ca.FK.5min..3. X12182.Swarthmore.College..sid2.37Cplus.wt.37C X6685.trr...0.3.mM.H2O2...10.min X518.2.5mM.DTT.120.min X1686.YP.raffinose.vs.reference.pool X407.heat.shock.33.to.37..20.minutes X4789.33C...1M.sorbitol.vs..29C...adapted X42191.L2.Comp.05.hr.00.min.Leucine.Batch.vs.Chemostat.Comparison X42199.L2.Comp.12.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison X405.W303a.vs.GZY45.15c X800.Heat.Shock.015.minutes X18421.2mM.MD.140min X857.YPD_12_h_30C X9836.cdc15.220.min X28838.P2Comp.06.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison2 X978.wt_plus_gamma_20_min X42051.L1CompR.18.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison X28851.P2Comp.11.hr.51.min.Phosphate.Batch.vs.Chemostat.Comparison2 X42221.U2.Comp.06.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison X42379.CC.UL.2B.Uracil.Leucine.Chemostat.Comparison X33772.DBY8778.wt._stationary_phase_3hours X42378.CC.PU.2A.Phosphate.Uracil.Chemostat.Comparison X53.Elutriation2.Sample2.Time2.0hrs X860.YPD_3_d_30C X18431.2mM.MD.070min X40954.H2O2_II_70_min X21648..24.mM.H2O2..030.minutes X6676.wt...0.3.mM.H2O2...30.min X12742.Nitrogen.Depletion.2.h X15729.Lycoming.College...AICAr.vs..no.purine X16514.DES.genomic.DNA.vs..MHY26..dun1..genomic.DNA..correct.version. X34884.S4Comp.15.hr.05.min.Sulfate.Batch.vs.Chemostat.Comparison X684.YP.fructose.vs.reference.pool X33779.delYPL230w_stationary_phase_5hours X42197.L2.Comp.11.hr.04.min.Leucine.Batch.vs.Chemostat.Comparison X29.alpha.factor.release.sample016 X18427.2mM.MD.020min X815.1M.sorbitol...15.min X18418.2mM.MD.170min X15184.Ca.FK.5min..2. X30462.Pomona.Brown.Sir3xpol2.12.red X34365.batch.02X25.6 X2142.cdc15.110.min X988.constant.0.32.mM.H2O2..60.min..redo X27095.P1Comp.05.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison X42391.CC.LS.1A.Leucine.Sulfate.Chemostat.Comparison X109.heat.shock.20.min X1170.pho85.delete.vs..wild.type X8195.steady.state.21.dec.C X42065.U3Comp.13.hr.30.min.Uracil.Batch.vs.Chemostat.Comparison X864.Amino.acid...adenine.starvation.4.h X1249.mec1_plus_gamma_5_min X27099.P1Comp.15.hr.0.min.Phosphate.Batch.vs.Chemostat.Comparison X34356.delPPT1_hypo_osmotic_shock_60min X3022.WT.vs.lpz8.null.cells.in.low.Cu X8524.DES459..mec1.....0.02..MMS...90.min X32626.S1Comp.08.hr.55.min.Sulfate.Batch.vs.Chemostat.Comparison X96.cdc15.240.min X515.2.5mM.DTT.045.min X33774.DBY8778.wt._stationary_phase_7hours X107.heat.shock.10.min X1018.YPD.13.d..25C. X21661..24.mM.H2O2..049.minutes.redo X42400.L2.CompR.12.hr.03.min.Leucine.Batch.vs.Chemostat.Comparison X680.YP.glucose.vs.reference.pool X979.wt_plus_gamma_30_min X992.constant.0.32.mM.H2O2..160.min..redo X42383.CC.PU.1B.Phosphate.Uracil.Chemostat.Comparison X12598.Muhlenberg.College.Bio550..increased.salt.concentration X14732.Univ..of.So..Colo..Wild.Type X14763.Ca.60min..1. X15638.Ca.FK.60min..2. X42066.U3Comp.25.hr.55.min.Uracil.Batch.vs.Chemostat.Comparison X38153.03II01.batch.p9 X42392.L2.CompR.05.hr.00.min.Leucine.Batch.vs.Chemostat.Comparison X831.1.5.mM.diamide..20.min. X4872.1M.sorbitol...60.min X33773.DBY8778.wt._stationary_phase_5hours X34348.wt_hypo_osmotic_shock_7min X5245.DES459..mec1....mock.irradiation...30.min X32628.S1Comp.12.hr.57.min.Sulfate.Batch.vs.Chemostat.Comparison X297.Kb.vs..Ctrl X40970.MD_II_63_min X42063.U3Comp.11.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison X681.YP.galactose.vs.reference.pool X1662.cdc15.030.min X32250.DBY8778_heat_shock2_0min X42404.CC.PU.2B.Phosphate.Uracil.Chemostat.Comparison X1108.DY.zap1.3.mM.vs..10.uM.zinc..2 X1311.diauxic.shift.timecourse..11.5.hr X79.cdc15.050.min X942.starv_in_H2O_1_h_30C X17473.Ca.FK.30min..5. X21634..24.mM.H2O2..155.minutes X91.cdc15.140.min X977.wt_plus_gamma_10_min X15728.Lycoming.College...peroxide.vs..control X42370.CC.PU.3B.Phosphate.Uracil.Chemostat.Comparison X797.Heat.Shock.000.minutes..series.3. X1107.alpha.factor.release.sample025 X1674.Elutriation2.Sample2.Time5.5hrs X34360.batch.02X25.4 X6856.Sporulation.t30min X8230.dtt.060.min X8233.dtt.120.min X40967.MD_II_42_min X7985.cdc47.1.ts.grown.at.34C.versus.37C X21654..24.mM.H2O2..275.minutes X854.YPD_6_h_30C X6854.Early.Sporulation.ndt80.delete X17694.Missouri.Western.State.College.10.uM.DAPI.Cy5.12.hrs..exp.2. X827.wt.vs.zap1...61.nM.zinc X7535.25C....15.min X7537.25C....45.min X13504.Univ..of.So..Colo..AAP1. X1258.DBYyap1...37degree.heat..repeat. X8286.mcm1.1..pRS.MCM7.vs..wild.type...pRS.MCM7 X37279.CC.SP.1A..Sulfate.Phosphate.Chemostat.Comparison X2554.Hypo.osmotic.shock..15.minutes X40953.H2O2_II_63_min X513.2.5mM.DTT.015.min X1172.pho80.mutant.vs.wild.type X1301.PHO81c.vs..wild.type..exp.2 X13093.Missouri.Western.State.College.10.uM.DAPI.Cy3.4.hrs..exp.1. X14761.Ca.30min..1. X1255.mec1_plus_gamma_90_min X15726.Lycoming.College...minimal.vs..rich.medium X40969.MD_II_56_min X42057.U3Comp.07.hr.15.min.Uracil.Batch.vs.Chemostat.Comparison X985.constant.0.32.mM.H2O2..20.min..redo X840.1.5.mM.diamide..60.min. X41003.H2O2_II_0_min X50.Elutriation2.Sample2.Time0.5hrs X1168.PHO81c.vs..wild.type..exp.1 X14947.Hydrostatic.pressure..C1.vs.P1. X1097.alpha.factor.release.sample020 X11466.yO1.test.hyb X1139.DY1457..wild.type..3.mM.vs..76.nM.zinc X1167.NBW7.strain.low.Pi.vs..High.Pi..exp.1 X7549.33C.no.sorbitol.5.min X28852.P2Comp.12.hr.22.min.Phosphate.Batch.vs.Chemostat.Comparison2 X838.1.5.mM.diamide..50.min. X863.Amino.acid...adenine.starvation.1.h X962.1.mM.Menadione..30.min..redo X4785.29C..1M.sorbitol.to.33C...1M.sorbitol...15.min X5187.MHY1..crt1..vs.CRY1..wild.type. X42396.L2.CompR.08.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison X27098.P1Comp.13.hr.15.min.Phosphate.Batch.vs.Chemostat.Comparison X33777.delYPL230w_stationary_phase_0hours X514.2.5mM.DTT.030.min X834.1.5.mM.diamide..30.min. X13064.wt.crz1.Ca.30min..2. X42395.L2.CompR.07.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison X34354.delPPT1_hypo_osmotic_shock_15min X3020.WT.vs.lpz8.null.cells.in.high.Cu X861.YPD_5_d_30C X2555.Hypo.osmotic.shock..30.minutes X1016.YPD.5.d..25C. X42194.L2.Comp.07.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison X118.heat.shock.80.min X856.YPD_10_h_30C X991.constant.0.32.mM.H2O2..120.min..redo X1012.YPD.12.h..25C. X18425.2mM.MD.040min X18433.2mM.MD.085min X55.Elutriation2.Sample2.Time3.0hrs X6364.DES459..mec1.....0.02..MMS...15.min X37282.CC.SP.1B..Sulfate.Phosphate.Chemostat.Comparison X13060.wt.crz1.Na.45min..2. X34359.batch.02X25.3 X38151.03II01.batch.p7 X298.Tunicamycin.vs..Ctrl X7759.Na.30min X32251.DBY8778_heat_shock2_5min X7530.DBY.msn2msn4.37C...20.min X7765.Na.FK.60min X38149.03II01.batch.p5 X40946.H2O2_II_7_min X2144.heat.shock.37.to.37..30.minutes X6859.Mid.Sporulation.ndt80.delete X12739.Nitrogen.Depletion.30.min. X40968.MD_II_49_min X963.1.mM.Menadione..120.min.redo X4781.DBYtrr1...0.3.mM.H2O2...30.min X4784.29C.to.33C...90.min X6351.DES460...0.02..MMS...30.min X34885.S4Comp.34.hr.20.min.Sulfate.Batch.vs.Chemostat.Comparison X42059.U3Comp.08.hr.08.min.Uracil.Batch.vs.Chemostat.Comparison X516.2.5mM.DTT.060.min X1254.mec1_plus_gamma_60_min X13133.Ca.Ca.FK.30min..2. X40966.MD_II_35_min X104.alpha.factor.release.sample024 X106.heat.shock.05.min X120.w303a.vs.w303a.fkh1.fkh2 X585.21.deg.growth X2064.Hypo.osmotic.shock...5.min X8193.steady.state.15.dec.C X13059.wt.crz1.Na.45min..1. X27103.P1Comp.24.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison X6834.Sporulation.t5hrs X18424.2mM.MD.055min X986.constant.0.32.mM.H2O2..30.min..redo X42394.L2.CompR.06.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison X9837.CLB2.induction.40minutes..possible.against.CLB5.0min. X95.cdc15.230.min X1015.YPD.3.d..25C. X1312.diauxic.shift.timecourse..13.5.hr X1665.cdc15.150.min X6679.trr...0.1.mM.H2O2...10.min X32622.S1Comp.05.hr.10.min.Sulfate.Batch.vs.Chemostat.Comparison X597.25.deg.growth X836.1.5.mM.diamide..40.min. X1253.mec1_plus_gamma_45_min X8528.dun1....0.02..MMS...90.min X812.1M.sorbitol...45.min....centrifugation.problem. X80.cdc15.070.min X27096.P1Comp.19.hr.6.min.Phosphate.Batch.vs.Chemostat.Comparison X42401.L2.CompR.12.hr.59.min.Leucine.Batch.vs.Chemostat.Comparison X7541.DES459..mec1....log.phase..IR.time X42375.CC.LS.3B.Leucine.Sulfate.Chemostat.Comparison X115.heat.shock.20.min.repeat X27102.P1Comp.21.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison X37285.CC.SP.3B..Sulfate.Phosphate.Chemostat.Comparison X27097.P1Comp.11.hr.10.min.Phosphate.Batch.vs.Chemostat.Comparison X859.YPD_2_d_30C X8235.dtt.480.min X584.17.deg.growth X1106.DY.zap1.3.mM.vs..76.nM.zinc X13057.wt.crz1.Na.30min..1. X1155.DY1457..wild.type..3.mM.vs..10.uM.zinc X7763.Na.FK.30min X18432.2mM.MD.077min X42229.U2.Comp.13.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison X512.2.5mM.DTT.005.min X801.Heat.Shock.030inutes X2108.cdc15.210.min X14946.Hydrostatic.pressure..C2.vs.P2. X40964.MD_II_21_min X1252.mec1_plus_gamma_30_min X42227.U2.Comp.11.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison X42380.CC.UL.2A.Uracil.Leucine.Chemostat.Comparison X974.1.mM.Menadione..80.min..redo X40975.MD_II_130_min X42198.L2.Comp.12.hr.03.min.Leucine.Batch.vs.Chemostat.Comparison X42226.U2.Comp.10.hr.05.min.Uracil.Batch.vs.Chemostat.Comparison X92.cdc15.160.min X13095.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.1. X27101.P1Comp.07.hr.5.min.Phosphate.Batch.vs.Chemostat.Comparison X12736.Nitrogen.Depletion.1.d X21628..24.mM.H2O2..105.minutes X21643..24.mM.H2O2..140.minutes X40972.MD_II_85_min X7762.Na.FK.15min X12801.DBYmsn2msn4..good.strain....0.32.mM.H2O2 X28849.P2Comp.10.hr.50.min.Phosphate.Batch.vs.Chemostat.Comparison2 X685.YP.sucrose.vs.reference.pool X692.DBYyap1....0.3.mM.H2O2..20.min. X5358.1M.sorbitol...5.min X1017.YPD.7.d..25C. X6688.trr...0.3.mM.H2O2...30.min X980.wt_plus_gamma_45_min X42231.U2.Comp.31.hr.35.min.Uracil.Batch.vs.Chemostat.Comparison X15636.Ca.FK.30min..2. X27100.P1Comp.16.hr.55.min.Phosphate.Batch.vs.Chemostat.Comparison X634.Elutriation2.Sample2.Time6.5hrs X1562.NBW7.strain.High.Pi.vs..Low.Pi..exp.2 X8526.dun1....0.02..MMs...30.min X1668.cdc15.130.min X40955.H2O2_II_77_min X13067.Na.Na.FK.45min..1. X18423.2mM.MD.000min X34872.S4Comp.05.hr.00.min.Sulfate.Batch.vs.Chemostat.Comparison X42382.CC.LS.2A.Leucine.Sulfate.Chemostat.Comparison X810.DES460..wild.type....heat.20.min X13066.Na.Na.FK.30min..2. X17677.Na.FK.60min..4. X964.1.mM.Menadione..160.min..redo X1679.Elutriation2.Sample2.Time6.0hrs X12741.Nitrogen.Depletion.1.h X6349.DES460...0.02..MMS...15.min X18429.2mM.MD.210min X21645..24.mM.H2O2..020.minutes X33778.delYPL230w_stationary_phase_2hours X811.DES459..mec1....heat.20.min X2558.1M.sorbitol.vs..YPD...basal X8291.wt.pRS315.vs..wt.pRS.MCM7 X21638..24.mM.H2O2..070.minutes X42062.U3Comp.10.hr.08.min.Uracil.Batch.vs.Chemostat.Comparison X18430.2mM.MD.014min X28845.P2Comp.09.hr.49.min.Phosphate.Batch.vs.Chemostat.Comparison2 X7764.Na.FK.45min X103.alpha.factor.release.sample026 X21641..24.mM.H2O2..112.minutes X28857.P2Comp.25.hr.43.min.Phosphate.Batch.vs.Chemostat.Comparison2 X40949.H2O2_II_35_min X993.constant.0.32.mM.H2O2..80.min..redo X984.MHY1..crt1..vs..CRY1..wild.type....log.phase X1302.diauxic.shift.timecourse..15.5.hr X12169.aft2.minus.cells.with.control.plasmid.vs.aft2.minus.cells.with.AFT2.vector X42049.L1CompR.13.hr.10.min.Leucine.Batch.vs.Chemostat.Comparison X42398.L2.CompR.09.hr.58.min.Leucine.Batch.vs.Chemostat.Comparison X42.alpha.factor.release.sample022 X8213.steady.state.36.dec.C X8217.steady.state.17.dec.C X1251.mec1_plus_gamma_20_min X12592.Muhlenberg.College.Bio550..tolnaftate.treatment X34353.delPPT1_hypo_osmotic_shock_7min X40947.H2O2_II_14_min X13096.Missouri.Western.State.College.10.uM.DAPI.Cy5.4.hrs..exp.2. X28842.P2Comp.08.hr.48.min.Phosphate.Batch.vs.Chemostat.Comparison2 X33771.DBY8778.wt._stationary_phase_0hours X990.constant.0.32.mM.H2O2..100.min..redo X6358.DES460...0.02..MMS...90.min X7761.Na.60min X11828.Pomona.College.Bio164..WT.rad27.mRNA X404.W303a.vs.GZY29.3b X21632..24.mM.H2O2..250.minutes X42047.L1CompR.09.hr.05.min.Leucine.Batch.vs.Chemostat.Comparison X42064.U3Comp.12.hr.10.min.Uracil.Batch.vs.Chemostat.Comparison X78.cdc.15.010.min X11826.Pomona.College.Bio164..WT.dna2.2.mRNA X13063.wt.crz1.Ca.30min..1. X13490.Y5.mRNP.vs..Poly X517.2.5mM.DTT.090.min X2559.29C.to.33C...5.min X12361.Swarthmore.College.sid2.mutant X45181.Low.D.chemostat.vs..High.D.chemostat X34355.delPPT1_hypo_osmotic_shock_30min YBR212W -1.23958138724109 -0.567887039474983 2.21414882272719 1.31896344652254 1.11134882994029 -0.171587374292979 -0.271730895232653 -1.06371959437142 0.563001989673048 0.792599330364009 -0.556895677420629 -1.78426444015688 0.148994018959028 1.04540065761416 2.18483852391558 -0.29615614424233 -0.0915946837862876 -0.763289031552397 0.305315612620959 -0.108692358093061 -0.166091693265802 -1.06616211927239 1.52902058800576 0.465300993634341 NA -0.164870430815318 2.30818603141445 1.37025646944286 -0.200287041879349 0.0256465114601605 -0.0903734213358038 -0.0830458466329008 -0.348059798387893 0.317528237125797 -0.498275079797405 1.18706710187029 -0.477513618139179 -0.228376078240477 NA 1.095472418084 -0.0573993351727403 0.191738204725962 -0.216163453735639 -0.903734213358038 0.527585378609017 -0.84389235328433 1.76106045359769 0.107471095642577 -0.411565445813052 -0.088541527660078 0.335847173883055 0.511708966752727 -0.945257136674488 0.274784051358863 2.03340198005559 1.30186577221577 -1.99920663144204 -0.725429895587398 -0.244252490096767 -0.531249165960468 0.335847173883055 NA 1.52169301330286 0.573993351727402 -0.166091693265802 -0.715659795983527 -0.616737537494337 0.144108969157093 -0.826794678977556 0.788935543012557 -0.217384716186123 0.437211957273213 2.51335812309573 1.13821660385093 -0.448203319327567 0.139223919355157 1.11257009239077 -0.427441857669342 -0.0769395343804816 0.466522256084825 -1.32140597142351 0.537355478212887 -0.467743518535309 -0.596586707061353 -0.290049831989911 0.0238146177844348 -0.152657806310479 1.20416477617706 -1.75373287889479 NA -1.30552955956722 -0.219827241087090 0.444539531976116 -0.591091026034176 -1.11501261729174 0.184410630023059 1.85754018718591 0.285775413413217 0.795041855264977 0.244252490096767 0.444539531976116 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0.0134338869553222 1.56443719906979 NA NA -0.495832554896437 -0.533691690861436 1.34460995798270 1.08081726867819 -0.186853154924027 -0.820688366725137 -0.766952818903848 -0.450645844228535 -0.122126245048383 0.00977009960387069 -0.291271094440395 -0.468354149760551 -0.130675082201770 NA -0.156321593661931 2.47549898713073 1.45574484097673 3.95261592099093 0.970903648134649 -0.346838535937409 -0.438433219723697 0.454309631579987 0.16242790591435 0.254022589700638 0.145330231607576 -0.563001989673048 -0.657039198360303 -0.632613949350627 -0.273562788908379 -0.682685709820464 0.106249833192094 0.451867106679019 -0.452477737904261 -0.103807308291126 0.663145510612722 0.156321593661931 0.0378591359649989 -0.289439200764669 -0.157542856112415 -1.99554284409059 0.241199333970557 NA 1.34949500778464 -0.0329740861630635 -0.453699000354745 0.227154815789993 NA 1.95279865832365 0.922663781340537 0.102586045840642 NA -0.705889696379657 -2.06515480376817 0.0940372086872553 -1.14188039120239 -0.260128901953057 0.371263784947086 1.04662192006465 -1.55710962436689 0.301651825269507 0.355387373090796 -0.758403981750462 -0.326077074279184 -0.431105645020794 2.83332888512250 -1.65725314530656 -0.0867096339843523 0.341953486135474 -1.18340331451884 0.343174748585958 -0.130675082201770 0.406680396011117 -0.311421924873378 0.0720544845785462 -0.343174748585958 0.0915946837862876 -0.357829897991764 NA 0.476292355688696 1.82945115082478 0.858547502690136 -0.8536624528882 -0.127011294850319 0.252801327250154 0.448203319327567 0.874423914546426 -0.0158764118562899 -1.50093155164463 0.0922053150115295 NA -1.31652092162157 0.698562121676754 2.47549898713073 -1.50459533899608 0.0781607968309654 -1.12234019199464 -0.759625244200945 0.0354166110640312 0.381033884550957 -0.484841192842082 0.523921591257565 0.373706309848054 0.30897939997241 0.148994018959028 0.836564778581427 -0.293102988116120 0.490947505094502 -0.216163453735639 0.365157472694667 0.563001989673048 -0.0134338869553222 3.54532489375457 -0.417671758065472 4.88138601458389 -1.04540065761416 -0.317528237125797 2.01264051839736 -0.128232557300803 2.25567174604364 1.54245447496108 0.180746842671608 -0.192959467176446 -0.606967437890466 0.387140196803376 -0.384697671902408 -0.481177405490631 -0.307758137521926 -0.447592688102325 1.46917872793205 2.17628968676219 0.0122126245048383 1.68534218166769 -0.114798670345480 -2.12255413894091 -0.291881725665637 -2.89927705744862 0.134949500778464 -0.515372754104178 -0.0683906972270947 0.635056474251594 0.109913620543545 0.230818603141445 -0.318749499576281 -0.257686377052089 1.43376211686802 -0.638720261603046 -0.619180062395304 -0.421335545416923 0.101364783390158 0.72298737068643 -1.16264185286061 -0.192959467176446 0.316306974675313 0.660702985711755 -0.554453152519661 -0.257686377052089 -2.70387506537121 1.59863254768334 0.90739800070949 0.541019265564339 -0.0732757470290301 NA 1.95585181444986 -0.0146551494058060 NA 0.495832554896437 0.606967437890466 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0.503665818090813 -0.416965579661693 0.544781395077818 0.0335181334133194 -0.665446675365767 0.0513944712337564 -0.0531821050158001 -0.368699467546513 -0.428585199244977 -0.617180563250588 0.839294060669517 0.422328481007824 -0.340991143924836 0.0799966117464556 1.01939816421042 2.55497558298596 0.892476165685318 0.650251788218396 1.07660244523582 -0.475063677578113 -0.55550719777008 1.20799352821603 -0.508134902545922 0.480426578924245 0.165803033284553 -0.19798044136134 -0.170272117739662 -0.730695308410363 -0.450036804629502 -0.707456069243794 1.92438776637004 -0.178316469758859 -0.795943941454958 -0.743208744884668 2.83742172054886 -0.808457377929264 -1.20441826065194 0.2945126655917 -0.657402323346571 -0.306132285174984 1.96148116734745 0.572489718699495 -0.81650172994846 -1.24732147142099 -0.423222297898846 -0.803094476583132 -1.19726772552377 0.210493877835646 -0.392832523604103 -1.45379317324704 -1.87120566135424 -0.0496068374517127 -0.117536921169373 -3.66330852785305 -1.99902147677037 0.629693999724894 1.66830922709228 -1.05157557228721 0.986326939242612 0.257866173059804 -0.107704935368133 0.321327172322355 0.785218138762695 1.54585631302229 0.795943941454958 -1.04353122026801 1.72998259257279 0.117536921169373 3.04836250683002 1.45379317324704 0.258759989950826 -0.747677829339778 0.78253668808963 -0.270379609534110 0.398195424950234 0.906777235941667 0.53629013461311 -1.24017093629282 1.76752290199571 -0.0201108800479916 -0.282893046008416 0.0487130205606908 0.508134902545922 1.10699221953056 -0.402664509405343 0.430372833027021 NA 0.399983058732278 0.309707552739071 1.03459305135779 0.559082465334167 -0.192617540015209 -0.67170339360292 1.0962664168383 0.252503271713673 -0.525117423475337 -0.00849126046470758 -1.32329590715785 -0.00312835911857648 -0.346354045270967 2.45486809119151 -0.408921227642496 0.169378300848641 -1.91321505523227 NA NA -0.772704702288389 0.405345960078409 0.000446908445510925 -1.96952551936665 -1.17224085257516 -0.104129667804046 -0.196192807579296 0.143457611009007 -0.0826780624195211 -0.691367365205401 -0.0245799645031009 NA -0.173847385303750 -0.958618615620934 0.383894354693885 2.22783860087196 1.60574204472075 2.06784537737905 -1.25715345722223 0.697177174997043 0.344566411488923 -0.0880409637656522 -2.33330899401254 -0.976494953441371 -2.09108461654562 -0.433948100591108 -0.446461537065414 0.159546315047400 2.48436404859523 -0.675278661167008 0.475063677578113 0.379425270238775 </div> </div> <p><a href="#bicluster034_pssm1" onclick="toggleVisible('bicluster034_pssm1'); return false;">[+]</a> Show/hide bicluster #34 motif PSSM #1.</p> <div id="bicluster034_pssm1" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 34 motif PSSM #1</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">14x4</span> <div class="gaggle-matrix-tsv"> POSITION A C G T 1 0 0 0 1 2 0.157895 0.052632 0 0.789474 3 0.105263 0.473684 0 0.421053 4 0 0.368421 0 0.631579 5 0 0.473684 0.157895 0.368421 6 0 0 0.105263 0.894737 7 0.210526 0.052632 0 0.736842 8 0.052632 0.736842 0 0.210526 9 0 0.894737 0.105263 0 10 0 0.842105 0 0.157895 11 0 0.052632 0 0.947368 12 0 0 0.105263 0.894737 13 0.210526 0.052632 0.105263 0.631579 14 0.315789 0.526316 0.157895 0 </div> </div> <p><a href="#bicluster034_pssm2" onclick="toggleVisible('bicluster034_pssm2'); return false;">[+]</a> Show/hide bicluster #34 motif PSSM #2.</p> <div id="bicluster034_pssm2" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 34 motif PSSM #2</span> <span class="gaggle-species hidden">Saccharomyces cerevisiae</span> <span class="gaggle-size hidden">10x4</span> <div class="gaggle-matrix-tsv"> POSITION A C G T 1 0.625 0 0.375 0 2 0 0 1 0 3 0 0 1 0 4 0 0 1 0 5 0 0.125 0.875 0 6 0.5 0 0 0.5 7 0.125 0.875 0 0 8 0.125 0.25 0.625 0 9 0 0 1 0 10 0.875 0.125 0 0 </div> </div> </td></table> </html>