[+] Show/hide bicluster #69 rows and columns.
bicluster 69
Helicobacter pylori 26695
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[+] Show/hide bicluster #69 rows (genes).
bicluster 69 genes
Helicobacter pylori 26695
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[+] Show/hide bicluster #69 rows (short gene names).
bicluster 69 short names
Helicobacter pylori 26695
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short_name
[+] Show/hide bicluster #69 rows (long gene names).
bicluster 69 long names
Helicobacter pylori 26695
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long_name
[+] Show/hide bicluster #69 rows (NCBI RefSeq gene IDs).
bicluster 69 NCBI RefSeq IDs
Helicobacter pylori 26695
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[+] Show/hide bicluster #69 gene upstream sequences.
bicluster 69 upstream sequences
Helicobacter pylori 26695
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upstream
[+] Show/hide bicluster #69 columns (arrays; conditions).
bicluster 69 arrays
Helicobacter pylori 26695
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[+] Show/hide bicluster #69 ratios.
bicluster 69 ratios
Helicobacter pylori 26695
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GENES Log-Chelate-T-3 Stat-Chelate-T-3 Stat-iron-survival-2hrs TC2-42HR Log-iron-survival-0 TC2-6HR TC2-12HR TC-Motility_broth-T-4 TC1-60HR Stat-Chelate-T-4 TC-Motility_broth-T-6 TC1-18HR TC2-50HR TC-Motility_broth-T-5 TC2-18HR G27pH-5-T2 Stat-iron-survival-60 TC2-35HR TC2-22HR TC1-42HR Stat-Chelate-T-5 TC1-12HR Stat-Chelate-T-2 Log-iron-survival-30 FeAddBack-2-0-repeat FeAddBack-1-0-repeat Log-Chelate-T-5 FeAddBack-1-120-repeat TC1-48HR G27pH5-T1-4 TC1-30HR Stat-iron-survival-0 TC-Motility_broth-T Log-Chelate-T-4 Stat-Chelate-T TC-Motility_broth-T-2 Log-iron-survival-2hrs G27pH5-T1 TC-Motility_broth-T-3 G27pH5-T1-2
HP0023 0.471868804387242 -0.0196136287548198 -0.0565233766982948 2.23965146904841 -0.0283554111624850 0.105685252421714 0.179504748308664 0.107627870734528 1.64618157448359 0.23001282444184 0.837081047196363 -2.11958402490727 2.18525815628961 0.71178216601983 0.705954311081386 -1.44355285204783 0.390278835249034 1.69863226892958 0.955580764278046 0.651560998322581 0.263037335759686 -1.70386370596497 0.252352935039207 0.323258503456935 0.197959622280401 -0.0905191971725481 -0.0400111210393718 0.403877163438736 0.753548459745341 -1.04337347960805 -1.15604534175129 -0.0351545752573356 -0.0526381400726659 0.508778552330717 -0.391625035658792 -0.198334513533751 -0.81414451869594 -0.277010555202738 0.0979147791704559 -0.60337043175557
HP0024 0.531945153502544 -0.293186277368559 -0.700700167717144 2.6739189903761 -0.118056341020406 1.71856273504099 -0.274101604817799 0.517350992140198 0.570114498604064 -0.37289285096291 1.25940796602564 -2.00070315676304 1.68600652892498 1.05059919576438 1.91502259953411 -0.362789200788978 -1.35856005681982 2.06545472434598 0.948440066227958 0.0200268780233292 -0.0158972114839841 -0.94318777189151 0.234448787270106 0.265882365589005 -0.311148322122215 0.139025424516305 -0.102339551860957 -0.382996501136842 0.105346590603198 -1.15311916994987 -0.349317667223736 -0.526692859166095 0.313032733067354 0.219854625907760 -0.832047619978258 -0.253894304469935 -1.36641845139954 -0.239300143107589 -0.00803881690425928 -0.067538090150747
HP0265 0.0277827435927051 -0.271068082027993 -0.859247525590297 2.15196753354374 0.378639472691514 -0.517180526656803 0.287079783469487 1.01369747713550 -1.13612402579771 -0.818228784818829 0.0138656708309569 -1.88325108984945 2.00913441835738 0.841565261398085 0.133259505576481 0.0131331933171807 -0.569186430134914 2.37757060778682 0.389626635398158 -0.208075015843238 1.5249667817513 -1.74554531725952 0.0211904459687191 0.142049235741795 0.65844588295403 0.825450756095009 0.0827185571259215 0.506823037602353 -1.72137355930491 -1.10535997021911 -1.00647550585932 0.413798393352773 -0.627784631237012 0.654051017871373 0.677490298312212 0.234341402477599 -0.0183633397751968 -0.203680150760580 0.988793241667106 -1.75946239002127
HP0267 0.0357771516158329 0.027436465963062 -1.30915840989347 2.55257904733944 0.0983322940116143 -0.300978031614790 0.158802264994203 1.26707087110613 -0.513665515760447 -0.537644987012163 0.693648732478134 -1.56980483654256 2.51296079048878 0.836482974281835 -0.0935034760021154 -2.34757377366344 -0.945295998291339 2.36699879156529 0.209888964617424 -0.20088980378154 1.77376752451196 -1.26328463880323 -0.115397775840639 -0.124781047200006 0.00241440900474946 0.452811434254376 0.196335350431672 0.05662886574776 -0.477175016029575 -0.806632099314023 -1.14338728254465 0.232825850162544 -0.663797857510322 0.226570335922966 0.512238819530368 0.327701149462813 0.0201383660168875 -0.75033247115782 1.29522068518423 -0.524091372826411
HP0268 0.787407704337047 -0.304677290086181 -1.31086795910533 2.46602823509095 -0.000365965797460952 0.54690359320564 -0.291179610379826 1.08926490504279 -1.29859734119047 -0.600399181834493 0.836490175996518 -1.75506432762355 2.06477902927478 1.00337057963872 -0.0666273025377467 -0.190560543477911 -0.275227807090498 2.15803572542777 0.808267754792322 0.424197414056962 0.841398423162465 -1.62867696310041 0.110069595436349 0.502729368712116 0.535860037082259 0.857350226451793 0.538314160665232 -0.267865436341577 -0.367257441452006 -1.04704967393568 -0.357440947120112 0.430332723014396 -0.378300997575387 0.6340249804012 0.0290835171982216 0.249954639665841 -0.888758702833884 -0.613896861540847 0.750595850592444 -0.0568108082058525
HP0469 0.721314810126151 0.434817282134519 -1.56454802886758 2.12627421785736 0.0687937499316862 0.271687017085903 -0.447105713284563 1.16584478238363 0.0198546704171013 -0.302327603053916 0.519441107128488 -1.66038705958365 1.69907683626129 0.966010207699075 0.518421542971935 -0.307425423836685 -0.254408087695885 2.09262860069108 0.995577568239137 0.632612728505966 0.958873258603198 -1.44729815086389 0.688688757116428 0.693786577899197 0.203376218596795 0.184004499622271 0.339997815575011 0.418504255629657 -0.336992784376747 -1.15264410961983 -0.259505908478654 -0.0311235374105913 -0.82740314367915 1.03737969865784 0.06981331408824 0.156476267395317 -1.14958541715017 -0.342090605159516 0.852838586321598 0.0331090044523014
HP0631 1.14398970236293 -0.719191050965384 -0.833547302569899 1.89969755517147 -0.138713500045127 -0.202631252843088 -0.254809010229178 0.906580906256219 0.102173813220657 -0.872680620609466 0.551772156030804 -1.58751589679891 1.68620356453339 0.813530572251024 -0.269157893510353 0.0573879047975963 -0.924858377995557 2.28711740376320 0.220008581984245 -0.144800905073504 1.01441493818747 -1.80579284853072 -0.710494758067702 -0.431778570697002 -0.0204439166366553 0.0743456759480757 -0.677448845056511 1.29617482807236 -0.654838483522539 -0.597008135752955 -0.69005846975815 0.0330382846840874 -1.00182057014004 1.30008815987632 0.224356728433086 -0.527437792571501 -0.428734868182813 -0.49221780633589 0.88657943259155 -0.76875992048217
HP0632 0.509440402525285 -0.648021268179276 -0.963616328501912 2.20534417747711 0.0939628630047938 -0.143572780801871 0.0750775202993169 0.960590256045011 -0.381108424608536 -0.904022580409074 0.38395779210445 -1.69217088265098 2.15036684649006 0.821258394306826 -0.029001701721978 0.112428531427927 -0.986278739748484 2.1230880181377 0.0415035777118024 -0.240097865740975 1.21407352258075 -1.62586234604064 -0.763851370106201 -0.326550767903825 -0.0839790327090329 0.225320913378444 -0.415521715760738 1.26653280787374 -0.717267524766025 -0.503653315052964 -1.30690989145925 0.269386713024557 -0.890593003374068 0.734385817861632 0.394869323445392 -0.509948429288123 -0.550656834675484 -0.282904642540056 0.873717679599817 -1.20660773797905
HP0633 0.355326999401688 -0.685163642144389 -1.04780241546409 2.43103876267018 0.0592757947628872 -0.0676717282618414 0.0458624715753687 0.97042367700075 -0.186475447922720 -0.915106325358992 0.529700200839429 -1.71559429129983 2.48565014993364 0.817128554857682 -0.0916240910966959 -0.110785981364579 -0.8149854487093 2.3773854699201 0.250894697441723 -0.339291522809091 1.05808932497632 -1.61355722562335 -0.725403611706945 -0.120366926498521 0.120114796363417 0.229337570890354 -0.265997292534436 1.24635489685827 -0.723008375423459 -0.538096134338383 -1.26145749195099 0.263349926115847 -0.468634282117305 0.313170840812344 0.299278470368129 -0.239649693416096 -0.574503725847362 -0.193182109516479 0.924914187614527 -1.51631063251384
HP0634 0.267148831045347 -0.9834265827701 -0.420146967917571 0.703572196502516 0.300282926036672 0.543581852115832 0.253895193048817 1.00935255885103 -0.937038849782245 -1.15667056515332 0.855989033462613 -1.47665125392669 2.56760171187164 1.02639295056086 0.613636795811777 -0.693739923703086 -0.688059793133144 2.17567270254568 -0.54416315202796 -1.12353647016199 0.965804891148148 0.459326581995033 -0.63125848743373 0.0068095132563626 0.00964957854133333 0.0730777032390131 -0.119100047710673 1.39654812603538 -2.48960787223291 -0.77704850539556 -1.98596962836477 0.463113335708328 -0.271516884670770 -0.100166279144202 0.320163383031467 -0.124780178280615 -0.691846546846439 -0.560256855309461 0.912790339162027 -0.743914410404235
HP0652 -0.0485623337952353 -1.70231803822756 -1.18150102434032 1.91715096843661 0.258449594770876 -0.500139978414782 -0.504324775458434 1.13193086860953 -0.633292611621893 -1.68557885005295 -1.07231586511048 -0.984815563288668 1.43323625575248 0.442961100786445 -0.576607633485152 0.586385508555248 -1.34965377827615 1.92628143471367 -0.456770263598751 0.75834262343986 0.876277812851873 -0.992804721281094 -1.46606722330866 -0.555303212172014 0.189210225503178 0.264156136194038 -1.11987037697017 1.79883534292972 -0.977967713580873 0.100568615396730 -0.895413080992464 0.369536934475095 -1.08867461719021 -0.132258274668277 0.546059282498237 -0.98747861595281 -0.47503119615287 -0.045899281131093 0.926495377375698 0.142797021928128
HP0653 0.0999247042078591 -0.597610316739469 -1.05482808394570 2.02719338873781 0.0176113141469333 -0.0568964958220082 -0.138263754962693 1.04818441901893 0.0462317744842092 -0.327253406280739 0.0133537250058509 -1.69370298783812 1.97728498269512 1.04463642806802 -0.0883553489200057 -0.123835258429025 -0.979137610326462 1.90064837815564 -0.103256910913794 0.137060342827300 0.864871553222325 -1.62723729069122 -0.317555564348273 -0.341681902814407 0.0921191241158748 0.152198437551148 -0.205202517569711 1.62414161671535 -0.539659797874737 -1.17829816903709 -1.48839257814592 0.180582365158364 -0.341681902814407 0.222921723839128 0.178690103317883 -0.382838597844870 -0.59926604584989 -0.122889127508785 1.15817213849689 -0.434639265728038
HP0654 0.738620741119454 -0.352290582555328 -0.72456820817741 1.47600620105534 0.0321205360499919 0.041496416991585 0.325530457281025 2.12790568770023 -0.649561160644665 -0.739459313202293 1.25650028254039 -0.928631499259144 1.47545467864701 1.53612214356320 0.292990635189614 0.503672195171295 -0.416818704329822 1.09324964967501 0.670783484894986 -0.00814059975802587 1.32819819562317 -0.90270994606768 0.0437025066249011 0.319463710789406 -0.84149095874316 -0.0439895562994116 1.28628249259016 2.10805088100039 -0.99205657621698 -0.866860989526295 -0.63522157802811 -0.457631362546169 0.57923076511237 0.65148020060347 -0.0643958854075849 0.867676984668442 -0.441085690296299 -0.783029583460285 1.81739857181100 -1.38308596372225
HP0963 -0.533114470800321 -0.458166631823863 -1.32006678005313 2.45409225411852 0.0343477385928631 -0.318977788010440 -0.231793567160275 1.37958497083358 -0.953740097709016 -0.985860600127498 0.612516782125542 -1.73457421602497 1.88357094925691 1.30999054892687 -0.343450551757855 -0.616474822314954 -0.376335828043444 2.56192536938057 0.302783365947321 0.157476331197045 1.35664175482038 -1.64127180423796 0.297429948877574 -0.371747184840804 0.476387033780546 0.319608391023669 1.03161286130002 -0.0964285926823856 -1.34071567446502 0.0802341706192662 -0.581295224428045 0.318078843289455 -0.0673671857323303 -0.605767988175460 0.315784521688135 0.848831907061517 -1.55408758338779 0.258426481655131 1.54018748292599 0.396850551601447
HP0964 -0.645757135299752 -0.105286489451047 -0.89668993515808 2.26950877261145 0.319953942942902 -0.258536824096459 -0.215837303374645 1.35410123932874 -0.476713827236683 -0.677928007076461 0.387220311203293 -2.09988053960698 1.74658587500458 1.36521481321524 -0.280179046928063 -0.832348191604662 -0.133947811579387 2.36251183829321 0.40301328462095 -0.0772100922641008 1.57637271705872 -1.78460599619524 0.463845478525999 -0.260291598920643 0.350954964836822 0.514149023485944 1.03531714626862 0.155590034410991 -1.01250507355423 -0.255612199389485 -0.955767354238944 0.39423941050003 -0.41412685850745 -0.765081823344271 0.467939953115762 0.732326026626168 -1.50384202432578 -0.161439283824938 1.54127722057504 0.000584924941394703
HP0965 -0.706209371476272 -0.062979940228367 -0.709952704732807 2.00521168400714 0.0349706133176282 -0.343729934468481 -0.271982713718229 0.813583930676877 -0.140966049739510 -0.589542151647602 -0.0754577177501498 -2.05006601057228 1.66394446878638 1.03381670393634 -0.384906600290364 -1.54845935419661 -0.240788269913772 1.95030946291129 0.233991164790064 -0.130983827722083 1.32330114244171 -1.68321935143187 0.117323944961395 -0.640077150610823 0.185327832455111 0.393706717068884 0.403065050210222 0.198429498852983 -0.883393812285588 1.01572392652976 -0.967618810557622 0.19343838784427 -0.637581595106466 -0.857190479489844 0.386220050555815 0.212155054126944 -1.75933379431474 0.17908894369422 1.11242670232358 0.870981707277078
HP0966 -0.99219071551431 0.136025409759765 0.102178926001543 1.70945297523815 0.0414288269483233 -0.636368706774024 -1.03384792629366 1.07244479373725 -0.179007246759073 -0.202439427822457 0.262732759213622 -1.89823504996518 0.956151746978226 1.32759520976077 -1.01388717946189 -0.329146777276315 0.0440324026220327 1.71726370225927 -0.198100135032942 0.352122190677645 1.31891662418174 -1.51464156737200 0.177682620539115 -0.745718885069819 0.132553975528152 0.108253935906865 0.723565653460186 -0.000228383831027151 -0.479286307793557 1.04206974421064 -0.488832751930491 0.336500736635389 -0.736172440932885 -0.943590636271734 0.341707887982808 0.388572250109577 -2.24798204880014 0.319143565477326 1.28854157465513 1.80665313372330
HP0983 0.186129527770332 0.42904386155062 -0.770395439016967 2.30784685626439 -0.252709153911435 -0.997380964024777 0.159846993295743 1.51538861983361 -0.291734735404006 -0.16589714610143 1.40149763711040 -1.12959007683634 2.47589578881403 1.18008719517295 0.543731284712461 -0.607921589537692 -0.645354290153015 2.07289692687034 0.575588902257417 0.00852330995720306 1.688216195015 -1.47922742939223 0.295241867861805 0.341435413301991 -0.373768100582267 0.295241867861805 0.270552214264465 0.482405370938421 -0.0854566618004166 -1.26896715359553 -0.478898238480621 -0.294124056719877 -0.745705785419626 0.397982684444288 0.2450661202285 0.448954872516217 0.163032755050239 -0.929683526741746 1.17291923122534 -1.78585699826243
HP1178 0.454842382636601 -0.0734133267472987 -0.242123265346345 2.12202846439898 -0.0734133267472987 -0.112133640524129 0.285026149358217 1.18389057632035 -0.138684712828241 0.0283657837517983 1.25745917249633 -0.721702008839373 2.22989219563444 1.03951912066674 0.204819785106211 -1.57133632257097 -0.600562741451861 2.55680227337882 0.740819557245477 -0.218337929740578 1.2900948655368 -0.743827902426133 -0.138684712828241 -0.336158313090076 0.140101546364937 0.279494675961527 0.495222138432439 0.186012775557465 -0.449553517722222 -1.57244261725030 -0.522568966558531 0.197628869690514 0.114103621400494 0.532836157529931 0.335915704607765 0.847576993801595 -1.07073798017052 -0.569033343090727 1.26022490919467 -0.252633064800056
HP1227 0.25021849125195 -0.755718834187864 -0.807556830067075 2.43371893929924 -0.755718834187864 0.28734570451679 0.243213356673678 1.25755684360742 0.152146607156147 -0.726297268959123 1.36333437573932 -0.181297798769586 2.25438749409548 1.11535261166850 0.422544801877434 -1.72592997327849 -1.07024937675226 1.98609083974767 0.43585455757615 0.297152892926370 1.07542334457235 -0.646438734766826 -1.06254372871616 -0.614215115706776 -0.300385086600205 -0.500731935538775 0.254421571998913 0.763694855839265 0.493997174575805 -0.303887653889340 -0.168688556528697 -0.490924747129194 0.00924186175940402 0.274736462275901 -0.329806651828946 0.543033116623707 -1.08496015936663 -1.62435552189355 1.42077647928115 -0.141368531673437
HP1285 0.950372115419241 0.335253012900918 0.384077087878873 2.34667641758485 0.0667206005221608 -0.120866634919459 -0.291108475303120 1.36505554171227 -0.954409230760217 -0.0424911461390559 0.84373005691476 -0.811470327041859 1.54300644656614 1.01846885157271 0.314695507647041 -0.166157388681904 0.316622773764592 2.14013773198733 0.768887889349867 0.169186915771950 0.76406972405599 -0.817894547433696 0.172077814948276 0.543076542576821 -0.340253761300667 -1.21876589988428 0.743833429821706 -0.741446324770844 -0.428586791688417 -1.59554642586548 -0.184466416798638 0.122932528950728 -0.30877508138067 0.947160005223324 0.200986806711539 0.686657868334362 -0.494113839685147 -0.948627432407564 1.17297135199637 -0.109624249233745
HP1461 -0.331890453691882 -1.47988277770618 -1.01014836199768 1.58489310993380 -0.158986632427932 0.455452698072286 0.284033029780559 1.36078601112816 0.181626474697189 -1.35595600452558 -0.159728708914043 -0.84985984099762 0.96006470862802 0.967485473489134 0.235055981697208 -2.24199532894256 -0.881027053414298 1.21014448444755 0.126712814724947 0.353046142988916 1.26505814441979 -1.01831120334490 -1.55483250280343 -1.13036475274772 -0.190895921330721 -0.272524334802972 -0.169375703233491 1.50697507889210 -0.160470785400154 0.572700782877883 -0.596811759233642 -0.0855210603029055 -0.275492640747417 -0.544866405205846 0.166784944974962 0.078477843127708 -1.03315273306713 -1.00124344416434 1.53368983239211 -0.337084989094661
HP1502 -0.0858621213359234 -1.40672953735512 -0.977884893213527 2.20929886687203 0.0398113846511899 0.214070008932290 0.690204168213364 1.09054554295582 -0.175906540574113 -0.843789966722122 0.549631225949428 -0.692852199222136 1.52522040129269 1.04843844043436 0.317070459715543 -1.95088286224777 -0.999910146840134 2.04670067098148 0.393511045831416 -0.0230253683423668 0.94543798965111 -0.279554792934619 -0.850267982494654 0.00547790105677235 -0.167485120069822 0.420070910498796 0.0456415988464683 0.668178914586756 -0.258177340885264 -0.192749381582695 0.477725250874327 0.213422207355037 0.135686018084658 0.00612570263402551 0.0300943609923925 0.0773838761318733 -1.33741476858903 -1.21109346102466 1.44230179940428 -0.515354567054769
[+] Show/hide bicluster #69 motif PSSM #1.
bicluster 69 motif PSSM #1
Helicobacter pylori 26695
15x4
POSITION A C G T
1 0.769231 0 0 0.230769
2 0.692308 0 0.076923 0.230769
3 0.538462 0 0 0.461538
4 0.384615 0 0.307692 0.307692
5 0.230769 0 0.692308 0.076923
6 0.076923 0 0.923077 0
7 0.076923 0 0.923077 0
8 0.538462 0.076923 0 0.384615
9 0 0 0 1
10 0.230769 0 0 0.769231
11 0.153846 0.153846 0 0.692308
12 0.153846 0.153846 0.076923 0.615385
13 0.769231 0 0 0.230769
14 0 0.076923 0 0.923077
15 0 0 1 0
[+] Show/hide bicluster #69 motif PSSM #2.
bicluster 69 motif PSSM #2
Helicobacter pylori 26695
11x4
POSITION A C G T
1 0 0 0.777778 0.222222
2 0 0.111111 0.888889 0
3 0.111111 0.111111 0.777778 0
4 0.333333 0 0.444444 0.222222
5 0 0 0.777778 0.222222
6 0 0 0 1
7 0 0 0.222222 0.777778
8 0.888889 0.111111 0 0
9 1 0 0 0
10 1 0 0 0
11 0.888889 0 0.111111 0
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