[+] Show/hide bicluster #54 rows and columns.
bicluster 54
Helicobacter pylori 26695
12x36
[+] Show/hide bicluster #54 rows (genes).
bicluster 54 genes
Helicobacter pylori 26695
12
[+] Show/hide bicluster #54 rows (short gene names).
bicluster 54 short names
Helicobacter pylori 26695
12
short_name
[+] Show/hide bicluster #54 rows (long gene names).
bicluster 54 long names
Helicobacter pylori 26695
12
long_name
[+] Show/hide bicluster #54 rows (NCBI RefSeq gene IDs).
bicluster 54 NCBI RefSeq IDs
Helicobacter pylori 26695
24
[+] Show/hide bicluster #54 gene upstream sequences.
bicluster 54 upstream sequences
Helicobacter pylori 26695
12
upstream
[+] Show/hide bicluster #54 columns (arrays; conditions).
bicluster 54 arrays
Helicobacter pylori 26695
36
[+] Show/hide bicluster #54 ratios.
bicluster 54 ratios
Helicobacter pylori 26695
12x36
GENES TC2-22HR TC2-35HR Log-iron-survival-60 FeAddBack-1-0-repeat TC1-6HR TC2-18HR TC1-18HR Log-iron-survival-0 FeAddBack-1-30-repeat G27pH5-T1-4 TC2-12HR FeAddBack-2-0-repeat Log-iron-survival-2hrs TC1-36HR TC2-50HR TC-Motility_broth-T-5 Log-Chelate-T-3 FeAddBack-2-60-repeat FeAddBack-1-60-repeat TC2-6HR FeAddBack-2-30-repeat TC1-30HR Stat-Chelate-T-5 TC-Motility_broth-T-6 G27pH5-T1-2 Stat-Chelate-T G27pH5-T1-3 TC-Motility_broth-T-4 Stat-iron-survival-0 FeAddBack-1-120-repeat Log-Chelate-T TC1-42HR TC1-12HR TC-Motility_broth-T-2 Stat-Chelate-T-4 Stat-iron-survival-30
HP0115 -1.52407525166260 -1.30970014782899 0.0310228376221674 0.446887110086266 -0.164609087734183 -1.27221379087448 -0.197995374396794 -0.00177772471302915 0.516588305048558 0.65540497064573 -1.04378130318293 0.309241893143923 -0.805391501925343 0.203811514209363 -2.10042798983819 -0.938350924248372 -1.19782680129287 0.434001174883153 0.516588305048558 -1.40927328348941 0.854551241966565 0.0550375350461505 -0.68707518778767 -2.03365541651297 0.110681346150502 0.516002580721144 0.586289500010851 -0.127708455107087 0.192682751988493 0.57223211615291 0.199125719590049 -0.311625893915153 0.0269227673302678 0.125324454335857 0.332670866240492 1.31668773629639
HP0759 -1.26227734515252 -1.80434179453465 -0.403264623602258 0.432790074209471 0.784813104867041 -1.02759532471414 -0.0971576404217626 0.178338644440684 0.770145478589642 1.34728468646120 -1.04162522810992 0.398353038601665 -0.0136159429287523 0.0106175265730369 -1.72781504873953 -0.754649931378203 -0.156465868412984 0.359451942822477 0.675124769227363 -1.05948146879545 0.499113253898578 0.0845933808416568 -0.85158380938536 -1.53394729272521 1.79496614936268 0.0743898147356402 1.85363665447227 -0.933212338233492 0.151554283412390 0.564160987824433 0.211500234285237 0.139437548661496 0.57436455393045 -1.45997143845659 0.430239182682967 0.110740018988324
HP0869 -1.34759418731979 -1.04264763331775 -0.557505388314505 0.328621773477135 -0.270380386169728 -1.24462522103339 0.406838584406230 0.0999118579756055 0.806833414980333 1.96622437191666 -1.18422996196155 -0.0387002120253215 -0.616910561172046 0.181098927547577 -1.00205409853176 -1.13769590988981 -1.04759806438921 0.710795052193977 0.658320482836483 -1.36739591160564 1.18108600398284 0.835545915194811 -0.790175648673204 -1.65155065510754 0.820694621980426 0.301889445691242 0.445451946763631 -0.659484268386616 0.201890738047716 0.64445927583639 0.0692191853325431 0.49198599883537 -0.207014868455019 -0.460476939313857 -0.0971152986685693 0.470204102120939
HP0870 -1.5022209346155 -1.40321059288022 -0.110972524458948 0.530042883889044 0.0344808126263845 -1.29348263683339 0.166664722468845 0.171257985745224 1.10879405671279 1.11389768257543 -0.989306535419852 0.00896268331316825 -0.846405011265841 0.617314886140244 -2.16569229675912 -1.08525470163755 -0.739739230736597 0.508097292679678 0.464716472847211 -1.19396193251185 0.454509221121924 0.479516987848876 -0.925511212136812 -2.23459124590481 0.357540329731702 0.578016966997891 0.827584271681146 -0.462612346395068 0.252405636961251 0.670392595111734 0.323856399038257 -0.110462161872684 0.214638805577691 -0.367684905349904 0.713773414944202 1.06643396205285
HP1076 -1.36497050143750 -0.698803599876162 -0.59169170180354 0.310812420021255 -0.0291814757963553 -0.59791110233679 0.133905027075507 0.0226468619807195 0.567880975395546 0.994255434174948 -0.735428958571961 0.200245299430162 -1.06436614233046 -0.141821729898531 -0.639373772558449 -1.53842267186477 -1.76370318006913 0.707471965141801 0.675683917971862 -0.908190084495544 0.735113745289574 -0.0630426564773775 -1.14936461628487 -2.47893424139276 0.85259131091761 0.209228877978189 0.806982373673785 -0.983513935398226 -0.0478396773961023 0.745479412844989 0.061345354187602 0.0544349091506587 -0.00430387366335944 -0.909572173502933 -0.168081421038916 0.521580993648026
HP1119 -1.28949389107874 -1.42018701118614 -0.526751269947796 0.477059753398045 0.186569583075315 -1.02316547405318 0.399083185939014 0.151974345399830 0.80928386123406 1.31228763442049 -0.530046054488319 0.419401023938902 -1.12969684086341 0.557232843884092 -2.15217830993887 -0.899611053783588 -1.73099501950875 0.700555971396819 0.732954686045289 -0.8792932157837 0.574255897343458 0.563273282208383 -0.548167369461192 -1.97920212156145 0.395788401398491 0.471019315073754 0.612145919559466 -0.438341218110444 0.065760816589492 0.989947880206041 0.335933148912334 0.0959630082109479 0.536915005884203 0.0102986101573641 -0.215943261625178 0.737896862856073
HP1154 -1.36820748642013 -1.69549250282251 -0.0783409732697123 0.349696310252904 0.0181181328762295 -1.12431940553977 0.298726441664424 0.353258720423067 0.78294019325499 1.24303916830907 -0.876686226788204 0.525076503245526 -0.677099913408584 0.0988660967332493 -1.93408264037289 -0.908930606020706 -0.903175943438135 0.527268755657934 0.723201315016878 -1.37761590302338 0.49246674861096 0.125538501084210 -0.803976521776684 -1.46083015084436 0.841856976838448 0.481779518100472 0.913653243344803 -0.461985145441072 0.138692015558657 0.883783804225747 0.356547099041679 -0.0925906139503628 0.213593972982589 -0.590231911566926 -0.269889027803841 0.691961718140067
HP1233 -1.47042729089415 -1.55034034283611 -0.613037578768395 0.222698274121469 0.421191983783774 -1.27966710238752 0.291268828368447 0.107726592940445 0.297971213370031 1.66886673023255 -0.616130987230665 0.283019739135728 -1.13221463235266 0.569160021895675 -2.02311626948633 -0.758943344572116 -1.66479645594009 0.428409936862404 0.41036505416583 -1.01105613424710 0.252085654513031 0.312922687604335 -0.515595212206900 -1.72769576133958 -0.625411212617474 0.312922687604335 -0.56251190721799 -0.387218761022707 0.0293602452296124 0.501620603802787 0.064934442545714 -0.0263211070912422 0.51347866957482 0.00100400099214017 0.00358184137736492 0.643917393067193
HP1558 -1.43015434580368 -1.57535139313269 -0.500030686181178 0.625605829250687 0.145449256895332 -1.80321012582228 0.575290020770336 0.269082386304196 0.790210402707837 1.31493240543150 -1.37408815921129 0.535037373986054 -0.477747970997022 0.437280946081371 -1.24398585442638 -0.88674361421588 -0.657447286998278 0.427936581649306 0.872872088068415 -0.967248907784442 1.11007518519007 0.647169747170838 -0.55465927824556 -1.47471977617199 0.466032836641572 0.673046448675019 1.01159996002138 -0.622945018326037 0.437280946081371 1.18698649243861 0.56019527822623 0.300709465920417 0.526411806817994 -0.904713545816006 -0.516563023253294 0.550850913794165
HP1559 -1.19182434711448 -0.79985710163084 -0.166679243541878 -0.0152450527629766 0.0884213060252644 -1.23891462120457 0.569826194385038 0.099939790335069 0.150756632878324 1.95644843791533 -0.994654998046653 -0.110441937794008 -0.481066109409485 0.419408340457001 -1.55533416077390 -1.37408742236963 -0.480727330459196 0.155499538182362 0.26594147597637 -1.21655521048554 -0.342166739791253 0.686704932234525 -1.05665154594942 -1.86023521603344 1.00143057705242 -0.0802906112183436 1.30633163231195 -0.6816232479802 0.106037811440260 1.54178300276237 0.264925139125505 0.575246657589651 0.420424677307867 -0.638937100243865 -0.53188295195274 0.232063580947533
HP0295 -1.36149018252827 -1.60777585993863 0.132858561833984 0.0972788298253592 0.266860149918417 -1.35224869369486 0.647147415413202 0.162431326100894 0.373599345944292 1.1304772814005 -1.14292897161815 0.224349301284735 -0.296408594477870 0.554732527079111 -1.97142844553327 -1.35917981031992 -0.931760951774747 0.532090879437259 0.349571474977429 -1.38089730907843 0.435055246686463 0.630512735513066 -1.03942429668396 -2.23989369614381 0.682727147421828 0.399013440236167 1.02558638314131 -0.86429808329086 0.125927445208928 0.360661261577519 0.369440675969258 0.226197599051417 0.60463656677952 -0.877698242099304 0.0598508000500523 0.744183048163998
HP1155 -1.52963667527083 -1.44997901642433 -0.646100475898392 0.404052993227973 0.380155695574023 -1.18910018370204 0.458485726773081 0.271290228483805 0.741270415678158 1.35662583026737 -0.831304532716505 0.268634973188922 -0.490768041147716 0.787737383338617 -1.59535424381919 -1.18246204546483 -1.21698036429831 0.488357348840519 0.376172812631698 -0.994602733351831 0.674889033306074 0.892619967486509 -1.04903546689694 -1.71152166297034 0.799022218341871 0.382810950868906 0.664931825950262 -1.10877871103182 0.275936925249851 0.741270415678158 0.230797585236834 0.826238585114425 0.244737675534972 -0.655393869430483 -0.204664283124035 0.492340231782844
[+] Show/hide bicluster #54 motif PSSM #1.
bicluster 54 motif PSSM #1
Helicobacter pylori 26695
18x4
POSITION A C G T
1 0 0.222222 0.777778 0
2 0.111111 0 0.888889 0
3 0.888889 0.111111 0 0
4 0.888889 0.111111 0 0
5 0 0.555556 0 0.444444
6 0.444444 0 0.555556 0
7 0.222222 0.555556 0.222222 0
8 0.222222 0.555556 0 0.222222
9 0.111111 0.111111 0.111111 0.666667
10 0.111111 0 0 0.888889
11 0.222222 0 0 0.777778
12 0.111111 0 0 0.888889
13 0 0 1 0
14 0 1 0 0
15 0.111111 0 0.222222 0.666667
16 0 0.111111 0.111111 0.777778
17 0.111111 0 0.555556 0.333333
18 0.333333 0 0 0.666667
[+] Show/hide bicluster #54 motif PSSM #2.
bicluster 54 motif PSSM #2
Helicobacter pylori 26695
10x4
POSITION A C G T
1 1 0 0 0
2 0.8 0 0 0.2
3 1 0 0 0
4 1 0 0 0
5 0 1 0 0
6 0 1 0 0
7 0 1 0 0
8 0 1 0 0
9 0.4 0.4 0 0.2
10 0 0 0 1
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