</td><td> <p><a href="#bicluster019" onclick="toggleVisible('bicluster019'); return false;">[+]</a> Show/hide bicluster #19 rows and columns.</p> <div id="bicluster019" style="display:none;" class="gaggle-data bicluster"> <span class="gaggle-name hidden">bicluster 19</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">14x179</span> <div class="gaggle-cluster"> <ol class="gaggle-rowNames"> <li>VNG0212H</li><li>VNG0213H</li><li>VNG0214C</li><li>VNG0611H</li><li>VNG0987H</li><li>VNG0989C</li><li>VNG1007H</li><li>VNG2176H</li><li>VNG2177H</li><li>VNG5062C</li><li>VNG6302C</li><li>VNG6412H</li><li>VNG6413H</li><li>VNG6429H</li> </ol> <ol class="gaggle-columnNames"> <li>NRC-1__HO_L_vs_NRC-1</li><li>NRC-1__LO_D_vs_NRC-1</li><li>NRC-1__LO_L_vs_NRC-1</li><li>VNG0019H__HO_D_vs_NRC-1c</li><li>VNG0019H__HO_L_vs_NRC-1c</li><li>VNG0019H__LO_D_vs_NRC-1c</li><li>VNG0750C__HO_L_vs_NRC-1</li><li>VNG0750C__LO_L_vs_NRC-1</li><li>VNG1296C__HO_D_vs_NRC-1</li><li>VNG1296C__LO_L_vs_NRC-1</li><li>VNG2334C__HO_D_vs_NRC-1</li><li>VNG2334C__HO_L_vs_NRC-1</li><li>VNG2334C__LO_D_vs_NRC-1</li><li>afsQ2__HO_D_vs_NRC-1</li><li>afsQ2__HO_L_vs_NRC-1</li><li>afsQ2__LO_L_vs_NRC-1</li><li>ark__LO_D_vs_NRC-1</li><li>boa1__HO_L_vs_NRC-1</li><li>boa4__HO_D_vs_NRC-1</li><li>boa4__HO_L_vs_NRC-1</li><li>boa4__LO_D_vs_NRC-1</li><li>bop__HO_D_vs_NRC-1</li><li>bop__LO_D_vs_NRC-1</li><li>bop__LO_L_vs_NRC-1</li><li>co__0000um_vs_NRC-1c</li><li>co__0300um_vs_NRC-1c</li><li>cu__1000um_vs_NRC-1</li><li>dark1__0000m_vs_NRC-1c</li><li>dark1__0240m_vs_NRC-1c</li><li>dark1__0480m_vs_NRC-1c</li><li>dark1__0720m_vs_NRC-1c</li><li>dark1__0960m_vs_NRC-1c</li><li>dark1__1200m_vs_NRC-1c</li><li>dark1__1440m_vs_NRC-1c</li><li>dark1__1680m_vs_NRC-1c</li><li>dark1__1920m_vs_NRC-1c</li><li>dark1__2160m_vs_NRC-1c</li><li>dark1__2400m_vs_NRC-1c</li><li>dark1__2640m_vs_NRC-1c</li><li>dark1__3120m_vs_NRC-1c</li><li>dark1__3600m_vs_NRC-1c</li><li>dark1__3870m_vs_NRC-1c</li><li>dark1__4110m_vs_NRC-1c</li><li>dark2__0060m_vs_NRC-1c</li><li>dark2__0540m_vs_NRC-1c</li><li>dark2__0780m_vs_NRC-1c</li><li>dark2__1020m_vs_NRC-1c</li><li>dark2__1260m_vs_NRC-1c</li><li>dark2__1500m_vs_NRC-1c</li><li>dark2__1740m_vs_NRC-1c</li><li>dark2__1980m_vs_NRC-1c</li><li>dark2__2460m_vs_NRC-1c</li><li>dark2__2700m_vs_NRC-1c</li><li>dark2__2940m_vs_NRC-1c</li><li>dark2__3180m_vs_NRC-1c</li><li>dark2__3420m_vs_NRC-1c</li><li>dark2__3660m_vs_NRC-1c</li><li>fe__2000um_vs_NRC-1</li><li>fe__6000um_vs_NRC-1</li><li>fe__7000um_vs_NRC-1</li><li>feso4__0005m_vs_NRC-1b</li><li>feso4__0010m_vs_NRC-1b</li><li>feso4__0020m_vs_NRC-1</li><li>feso4__0080m_vs_NRC-1</li><li>feso4__0160m_vs_NRC-1</li><li>feso4__0320m_vs_NRC-1</li><li>gamma4__0000gy-040min</li><li>gamma4__0000gy-060min</li><li>gamma4__0000gy-240min</li><li>gamma4__2500gy-010min</li><li>gamma4__2500gy-020min</li><li>gamma4__2500gy-030min</li><li>gamma4__2500gy-050min</li><li>gamma4__2500gy-120min</li><li>gamma__0000gy-0000m</li><li>gamma__0000gy-0030m</li><li>gamma__0000gy-0060m</li><li>gamma__0000gy-0240m</li><li>gamma__2500gy-0000m</li><li>gamma__2500gy-0010m</li><li>gamma__2500gy-0020m</li><li>gamma__2500gy-0040m</li><li>gamma__2500gy-0060m</li><li>gamma__2500gy-0240m</li><li>gamma__2500gy-0480m</li><li>gamma__2500gy-0960m</li><li>gap__HO_D_vs_NRC-1c</li><li>gap__HO_L_vs_NRC-1c</li><li>gap__LO_D_vs_NRC-1c</li><li>gap__LO_L_vs_NRC-1c</li><li>htlD__HO_D_vs_NRC-1</li><li>htlD__HO_L_vs_NRC-1</li><li>htlD__LO_L_vs_NRC-1</li><li>htr1__HO_D_vs_NRC-1</li><li>htr1__HO_L_vs_NRC-1</li><li>htr2__HO_L_vs_NRC-1</li><li>htr2__LO_D_vs_NRC-1</li><li>htr2__LO_L_vs_NRC-1</li><li>htr8__HO_D_vs_NRC-1</li><li>htr8__LO_D_vs_NRC-1</li><li>htr8__LO_L_vs_NRC-1</li><li>kinA2_II__HO_D_vs_NRC-1c</li><li>kinA2_II__HO_L_vs_NRC-1c</li><li>kinA2_II__LO_L_vs_NRC-1c</li><li>kinA2_I__LO_L_vs_NRC-1</li><li>light2__1440m_vs_light1_3960m</li><li>light2__1620m_vs_light1_3960m</li><li>light2__1800m_vs_light1_3960m</li><li>light2__1980m_vs_light1_3960m</li><li>light2__2160m_vs_light1_3960m</li><li>light2__2340m_vs_light1_3960m</li><li>light2__2520m_vs_light1_3960m</li><li>light2__2700m_vs_light1_3960m</li><li>light2__2880m_vs_light1_3960m</li><li>light2__3420m_vs_light1_3960m</li><li>light2__3600m_vs_light1_3960m</li><li>light2__3780m_vs_light1_3960m</li><li>light2__3960m_vs_light1_3960m</li><li>light2__4140m_vs_light1_3960m</li><li>light2__4320m_vs_light1_3960m</li><li>light2__4500m_vs_light1_3960m</li><li>light2__4680m_vs_light1_3960m</li><li>light2__4860m_vs_light1_3960m</li><li>light2__5040m_vs_light1_3960m</li><li>light2__5220m_vs_light1_3960m</li><li>light2__5400m_vs_light1_3960m</li><li>light2__5760m_vs_light1_3960m</li><li>mn__1000um_vs_NRC-1</li><li>mn__1500um_vs_NRC-1</li><li>ni__0750um_vs_NRC-1c</li><li>ni__1500um_vs_NRC-1c</li><li>o2__-001m_L2H_005_vs_NRC-1c</li><li>o2__0001m_L2H_500_vs_NRC-1c</li><li>o2__0010m_H_947_vs_NRC-1c</li><li>o2__0020m_H_937_vs_NRC-1c</li><li>o2__0045m_H_939_vs_NRC-1c</li><li>o2__0360m_H_903_vs_NRC-1c</li><li>o2__0372m_H2L_079_vs_NRC-1c</li><li>o2__0382m_H2L_048_vs_NRC-1c</li><li>o2__0387m_L_041_vs_NRC-1c</li><li>o2__0392m_L_037_vs_NRC-1c</li><li>o2__0407m_L_030_vs_NRC-1c</li><li>o2__0432m_L_024_vs_NRC-1c</li><li>o2__0477m_L_017_vs_NRC-1c</li><li>o2__0567m_L_011_vs_NRC-1c</li><li>o2__0750m_L2H_540_vs_NRC-1c</li><li>o2__0755m_L2H_825_vs_NRC-1c</li><li>o2__0760m_L2H_847_vs_NRC-1c</li><li>o2__0770m_L2H_852_vs_NRC-1c</li><li>o2__0780m_L2H_847_vs_NRC-1c</li><li>phoR__LO_D_vs_NRC-1</li><li>phoR__LO_L_vs_NRC-1</li><li>phr1__LO_L_vs_NRC-1</li><li>phr1_and_2__HO_D_vs_NRC-1</li><li>phr1_and_2__LO_D_vs_NRC-1</li><li>phr1_and_2__LO_L_vs_NRC-1</li><li>phr2__HO_D_vs_NRC-1</li><li>phr2__LO_D_vs_NRC-1</li><li>sop2_II__HO_L_vs_NRC-1c</li><li>sop2_II__LO_D_vs_NRC-1c</li><li>sop2_I__HO_L_vs_NRC-1</li><li>tbp_A_vs_NRC-1c</li><li>tbp_C_vs_NRC-1c</li><li>tfbG_CHIS_over</li><li>tfb_A_vs_NRC-1c</li><li>tfb_B_vs_NRC-1c</li><li>tfb_C_vs_NRC-1c</li><li>tfb_D_vs_NRC-1c</li><li>ura3__HO_D_vs_NRC-1</li><li>ura3__LO_L_vs_NRC-1</li><li>uv__200jm2_D_060m</li><li>uv__200jm2_L_030m</li><li>uv__200jm2_L_060m</li><li>zim__HO_L_vs_NRC-1</li><li>zim__LO_D_vs_NRC-1</li><li>zim__LO_L_vs_NRC-1</li><li>zn__0005um_vs_NRC-1</li><li>zn__0010um_vs_NRC-1</li><li>zn__0020um_vs_NRC-1</li> </ol> </div> </div> <p><a href="#bicluster019_genes" onclick="toggleVisible('bicluster019_genes'); return false;">[+]</a> Show/hide bicluster #19 rows (genes).</p> <div id="bicluster019_genes" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 19 genes</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">14</span> <div class="gaggle-namelist"> <ol> <li>VNG0212H</li><li>VNG0213H</li><li>VNG0214C</li><li>VNG0611H</li><li>VNG0987H</li><li>VNG0989C</li><li>VNG1007H</li><li>VNG2176H</li><li>VNG2177H</li><li>VNG5062C</li><li>VNG6302C</li><li>VNG6412H</li><li>VNG6413H</li><li>VNG6429H</li> </ol> </div> </div> <p><a href="#bicluster019_short_names" onclick="toggleVisible('bicluster019_short_names'); return false;">[+]</a> Show/hide bicluster #19 rows (short gene names).</p> <div id="bicluster019_short_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 19 short names</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">14</span> <span class="gaggle-namelist-tag hidden">short_name</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color: green; border-collapse: collapse" border="1"> <tr> <td>VNG0212H</td><td class="short_name"></td></tr> <tr> <td>VNG0213H</td><td class="short_name"></td></tr> <tr> <td>VNG0214C</td><td class="short_name"></td></tr> <tr> <td>VNG0611H</td><td class="short_name"></td></tr> <tr> <td>VNG0987H</td><td class="short_name"></td></tr> <tr> <td>VNG0989C</td><td class="short_name"></td></tr> <tr> <td>VNG1007H</td><td class="short_name"></td></tr> <tr> <td>VNG2176H</td><td class="short_name"></td></tr> <tr> <td>VNG2177H</td><td class="short_name"></td></tr> <tr> <td>VNG5062C</td><td class="short_name">VNG7043</td></tr> <tr> <td>VNG6412H</td><td class="short_name"></td></tr> <tr> <td>VNG6413H</td><td class="short_name"></td></tr> <tr> <td>VNG6429H</td><td class="short_name"></td></tr> <tr> <td>VNG6302C</td><td class="short_name"></td></tr> </table> </div> <p><a href="#bicluster019_long_names" onclick="toggleVisible('bicluster019_long_names'); return false;">[+]</a> Show/hide bicluster #19 rows (long gene names).</p> <div id="bicluster019_long_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 19 long names</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">14</span> <span class="gaggle-namelist-tag hidden">long_name</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color:green; border-collapse: collapse" border="1"> <tr> <td>VNG0212H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG0213H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG0214C</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG0611H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG0987H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG0989C</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG1007H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG2176H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG2177H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG5062C</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG6412H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG6413H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG6429H</td><td class="long_name">hypothetical protein</td></tr> <tr> <td>VNG6302C</td><td class="long_name">hypothetical protein</td></tr> </table> </div> <p><a href="#bicluster019_refseq_names" onclick="toggleVisible('bicluster019_refseq_names'); return false;">[+]</a> Show/hide bicluster #19 rows (NCBI RefSeq gene IDs).</p> <div id="bicluster019_refseq_names" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 19 NCBI RefSeq IDs</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">27</span> <div class="gaggle-namelist"> <ol> <li>NP_045988.1</li><li>NP_279339</li><li>NP_279339.1</li><li>NP_279340</li><li>NP_279340.1</li><li>NP_279341</li><li>NP_279341.1</li><li>NP_279639</li><li>NP_279639.1</li><li>NP_279924</li><li>NP_279924.1</li><li>NP_279926</li><li>NP_279926.1</li><li>NP_279943</li><li>NP_279943.1</li><li>NP_280831</li><li>NP_280831.1</li><li>NP_280832</li><li>NP_280832.1</li><li>NP_395802</li><li>NP_395802.1</li><li>NP_395884</li><li>NP_395884.1</li><li>NP_395885</li><li>NP_395885.1</li><li>NP_395893</li><li>NP_395893.1</li> </ol> </div> </div> <p><a href="#bicluster019_upstream_seqs" onclick="toggleVisible('bicluster019_upstream_seqs'); return false;">[+]</a> Show/hide bicluster #19 gene upstream sequences.</p> <div id="bicluster019_upstream_seqs" style="display:none;" class="gaggle-data genes"> <span class="gaggle-name hidden">bicluster 19 upstream sequences</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">14</span> <span class="gaggle-namelist-tag hidden">upstream</span> <table class="toc" style="font-family: monospace; font-size: xx-small; color:green; border-collapse: collapse" border="1"> <tr> <td>VNG0212H</td><td class="upstream">TTCTTAACTAAAGACGAATGACAGGGGCGCTATTGACGAGTATATACACACCTACTATGAGGATATTGAGCCGATCTACCGCGAGCAAATTTATAAACTTAGCGTCTAAGCTACCACAATCTACATACAGCTTCAGTCTTACGACATCTACATGGATAGACGAACGTATCT</td></tr> <tr> <td>VNG0213H</td><td class="upstream">GAAAATCAGACTGACACCATTGCTGATATATCTCAAAATCTCCGTGTTGATGTGCATTCAGCCGGTGATGCAATTGAGTCTGGCGGCCTTGAAGTTACTGTAAATAGTAGAGGGTGTCATAGAACGAGTAGCACACCAAAGAGCAGGGTGAATGCTGAGGTGGATGAGTCC</td></tr> <tr> <td>VNG0214C</td><td class="upstream">TGGTACAGTCACTATTGTCGTGGTTGGAGTCATGCACGTGGCTAAACTCTGCCGAGTAGAACAGGCCTTCAAAGCGTAGCCTATGCTCAAAGCATTGGAATAGAGACGAACACTATCCCCATGTGGGAACCCAATTTAGTACTATCAAAAGATGAGCAGTGAGAAAACAGC</td></tr> <tr> <td>VNG0611H</td><td class="upstream">TCCGGTCAGGGTCGGCCTCAAAGCTCTCGACGCTTCGTTGGCACGGGGGCGGGGAGCATCGAGATACGCAGCAGGCGAAAGTCGGCATCACGGACGCTCTATCACATAGACGACTGACATGATTTAAAAGACCAGCGCTAGAATACACTGTATGGGTATCACGAAGCAGGT</td></tr> <tr> <td>VNG0987H</td><td class="upstream">TCGAAACAGCAACAGCAGCAACAGATTACGGTCTCCGACAACAGTAGTTCGAAGCCGAAGCGGATTTGCCCAGATTGTGGAATGGAGAATCCGACGGAAGCGAATCACTGCGGAGACTGCGGTTTCACTTTTAAATCTCCTGAGGATACAGATGACAAATAGCGATTCTGA</td></tr> <tr> <td>VNG0989C</td><td class="upstream">AGGCGCTATCAACCAACGCTGTGTTCGGCTTCGAGAAAGCGGGCCGGGCGCGATTTGAACGCCTCACGCCGTGTACCCGCCGTACACGGGCGCTCGGCAGGTGATGGATACCGGGAGATCGCTGTTGGTGAGTTGAGCGCGAGGCCCACCAATGACAACTGATCTCAAGCC</td></tr> <tr> <td>VNG1007H</td><td class="upstream">TTTAGTTAAGAAATCGCGTGACAGCGGTAGGATCTCTTCGCTGTGCAAGACGCGGCTGAGATCTCTTTTGATAATATTTTAACCTAAATCGAAATAAGACGATAATCTTACCGTGCACCCGGTGCACGTATTTCTAAGAGCGTCTAAGACTATGGCTCGAACCAAAATGGG</td></tr> <tr> <td>VNG2176H</td><td class="upstream">TGAGCTTCTATGGCGTTAGCATGTATTCTCTTGATGGCGTTAGCCTTCGCTGTCGCTATTTAATAACAAAAGGTTCAATTGTTCAGGCAGAGTCAAACCAGCAACTAACCCACTATGCAGCTCAGACAGCCCTAACACTAAACTATACAACATGTCTAGCAGTGGAAATTC</td></tr> <tr> <td>VNG2177H</td><td class="upstream">TGAGCTTCTATGGCGTTAGCATGTATTCTCTTGATGGCGTTAGCCTTCGCTGTCGCTATTTAATAACAAAAGGTTCAATTGTTCAGGCAGAGTCAAACCAGCAACTAACCCACTATGCAGCTCAGACAGCCCTAACACTAAACTATACAACATGTCTAGCAGTGGAAATTC</td></tr> <tr> <td>VNG5062C</td><td class="upstream">GGGCGATGGAATCGGGTTTGAACGCCGTAATACCTGCATATAGGCATTTAGGCGTGGTATTCAGAATATCGACATCCCACAGTATTGCTTAGAATGGGAATTACTATGCAAATGCTTTTGTGCGTCCACCCAGTAGAATCGACTGCACAATATGAACGCCGACGACTTCCC</td></tr> <tr> <td>VNG6412H</td><td class="upstream">CGCGTCGCCAGCGGTCCTTTCGCGTCTCCTCAGTCACAGTGGGTGCTTCTCAGGCAACGGTGTTAGGTCTTGCTAACTACGTCGGGATTTCCTCTCTAAATCGTCATGGTACACCCGAACAGTTACAATCGTTCAGGAAGTAGAACTTCATATGAGCGAACGGACGGACAC</td></tr> <tr> <td>VNG6413H</td><td class="upstream">CGCGTCGCCAGCGGTCCTTTCGCGTCTCCTCAGTCACAGTGGGTGCTTCTCAGGCAACGGTGTTAGGTCTTGCTAACTACGTCGGGATTTCCTCTCTAAATCGTCATGGTACACCCGAACAGTTACAATCGTTCAGGAAGTAGAACTTCATATGAGCGAACGGACGGACAC</td></tr> <tr> <td>VNG6429H</td><td class="upstream">CGTTCAACAAACTCTAAGTCGATCTGGTCTAAACAACCGCTGAGGCGGTCGTTTTCCGGCATGGACACCTGAAAACCGCACCGCCTCACCTTTCAATCCTTATCTGAACACTGCCGGCCTATCCGCTCAGGAACCAGTGATACCGTCGCACATGTCGCCGGTATCACGGGC</td></tr> <tr> <td>VNG6302C</td><td class="upstream">CCGGCGACGGCCCCGCTGAGGCCCGCCAGGAACGTGCGCCGATCGACACTGGGTGACTCTGTGGTGTGCGGTGTTGGCATCTGATCGCTCTACACGGCTGTACCACCACTGCGCTCAAAGCCACTTATAATAGTCGTCCGGACGCCTATATATGCGGTGGCGTCACCCCAG</td></tr> </table> </div> <p><a href="#bicluster019_arrays" onclick="toggleVisible('bicluster019_arrays'); return false;">[+]</a> Show/hide bicluster #19 columns (arrays; conditions).</p> <div id="bicluster019_arrays" style="display:none;" class="gaggle-data arrays"> <span class="gaggle-name hidden">bicluster 19 arrays</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">179</span> <div class="gaggle-namelist"> <ol> <li>NRC-1__HO_L_vs_NRC-1</li><li>NRC-1__LO_D_vs_NRC-1</li><li>NRC-1__LO_L_vs_NRC-1</li><li>VNG0019H__HO_D_vs_NRC-1c</li><li>VNG0019H__HO_L_vs_NRC-1c</li><li>VNG0019H__LO_D_vs_NRC-1c</li><li>VNG0750C__HO_L_vs_NRC-1</li><li>VNG0750C__LO_L_vs_NRC-1</li><li>VNG1296C__HO_D_vs_NRC-1</li><li>VNG1296C__LO_L_vs_NRC-1</li><li>VNG2334C__HO_D_vs_NRC-1</li><li>VNG2334C__HO_L_vs_NRC-1</li><li>VNG2334C__LO_D_vs_NRC-1</li><li>afsQ2__HO_D_vs_NRC-1</li><li>afsQ2__HO_L_vs_NRC-1</li><li>afsQ2__LO_L_vs_NRC-1</li><li>ark__LO_D_vs_NRC-1</li><li>boa1__HO_L_vs_NRC-1</li><li>boa4__HO_D_vs_NRC-1</li><li>boa4__HO_L_vs_NRC-1</li><li>boa4__LO_D_vs_NRC-1</li><li>bop__HO_D_vs_NRC-1</li><li>bop__LO_D_vs_NRC-1</li><li>bop__LO_L_vs_NRC-1</li><li>co__0000um_vs_NRC-1c</li><li>co__0300um_vs_NRC-1c</li><li>cu__1000um_vs_NRC-1</li><li>dark1__0000m_vs_NRC-1c</li><li>dark1__0240m_vs_NRC-1c</li><li>dark1__0480m_vs_NRC-1c</li><li>dark1__0720m_vs_NRC-1c</li><li>dark1__0960m_vs_NRC-1c</li><li>dark1__1200m_vs_NRC-1c</li><li>dark1__1440m_vs_NRC-1c</li><li>dark1__1680m_vs_NRC-1c</li><li>dark1__1920m_vs_NRC-1c</li><li>dark1__2160m_vs_NRC-1c</li><li>dark1__2400m_vs_NRC-1c</li><li>dark1__2640m_vs_NRC-1c</li><li>dark1__3120m_vs_NRC-1c</li><li>dark1__3600m_vs_NRC-1c</li><li>dark1__3870m_vs_NRC-1c</li><li>dark1__4110m_vs_NRC-1c</li><li>dark2__0060m_vs_NRC-1c</li><li>dark2__0540m_vs_NRC-1c</li><li>dark2__0780m_vs_NRC-1c</li><li>dark2__1020m_vs_NRC-1c</li><li>dark2__1260m_vs_NRC-1c</li><li>dark2__1500m_vs_NRC-1c</li><li>dark2__1740m_vs_NRC-1c</li><li>dark2__1980m_vs_NRC-1c</li><li>dark2__2460m_vs_NRC-1c</li><li>dark2__2700m_vs_NRC-1c</li><li>dark2__2940m_vs_NRC-1c</li><li>dark2__3180m_vs_NRC-1c</li><li>dark2__3420m_vs_NRC-1c</li><li>dark2__3660m_vs_NRC-1c</li><li>fe__2000um_vs_NRC-1</li><li>fe__6000um_vs_NRC-1</li><li>fe__7000um_vs_NRC-1</li><li>feso4__0005m_vs_NRC-1b</li><li>feso4__0010m_vs_NRC-1b</li><li>feso4__0020m_vs_NRC-1</li><li>feso4__0080m_vs_NRC-1</li><li>feso4__0160m_vs_NRC-1</li><li>feso4__0320m_vs_NRC-1</li><li>gamma4__0000gy-040min</li><li>gamma4__0000gy-060min</li><li>gamma4__0000gy-240min</li><li>gamma4__2500gy-010min</li><li>gamma4__2500gy-020min</li><li>gamma4__2500gy-030min</li><li>gamma4__2500gy-050min</li><li>gamma4__2500gy-120min</li><li>gamma__0000gy-0000m</li><li>gamma__0000gy-0030m</li><li>gamma__0000gy-0060m</li><li>gamma__0000gy-0240m</li><li>gamma__2500gy-0000m</li><li>gamma__2500gy-0010m</li><li>gamma__2500gy-0020m</li><li>gamma__2500gy-0040m</li><li>gamma__2500gy-0060m</li><li>gamma__2500gy-0240m</li><li>gamma__2500gy-0480m</li><li>gamma__2500gy-0960m</li><li>gap__HO_D_vs_NRC-1c</li><li>gap__HO_L_vs_NRC-1c</li><li>gap__LO_D_vs_NRC-1c</li><li>gap__LO_L_vs_NRC-1c</li><li>htlD__HO_D_vs_NRC-1</li><li>htlD__HO_L_vs_NRC-1</li><li>htlD__LO_L_vs_NRC-1</li><li>htr1__HO_D_vs_NRC-1</li><li>htr1__HO_L_vs_NRC-1</li><li>htr2__HO_L_vs_NRC-1</li><li>htr2__LO_D_vs_NRC-1</li><li>htr2__LO_L_vs_NRC-1</li><li>htr8__HO_D_vs_NRC-1</li><li>htr8__LO_D_vs_NRC-1</li><li>htr8__LO_L_vs_NRC-1</li><li>kinA2_II__HO_D_vs_NRC-1c</li><li>kinA2_II__HO_L_vs_NRC-1c</li><li>kinA2_II__LO_L_vs_NRC-1c</li><li>kinA2_I__LO_L_vs_NRC-1</li><li>light2__1440m_vs_light1_3960m</li><li>light2__1620m_vs_light1_3960m</li><li>light2__1800m_vs_light1_3960m</li><li>light2__1980m_vs_light1_3960m</li><li>light2__2160m_vs_light1_3960m</li><li>light2__2340m_vs_light1_3960m</li><li>light2__2520m_vs_light1_3960m</li><li>light2__2700m_vs_light1_3960m</li><li>light2__2880m_vs_light1_3960m</li><li>light2__3420m_vs_light1_3960m</li><li>light2__3600m_vs_light1_3960m</li><li>light2__3780m_vs_light1_3960m</li><li>light2__3960m_vs_light1_3960m</li><li>light2__4140m_vs_light1_3960m</li><li>light2__4320m_vs_light1_3960m</li><li>light2__4500m_vs_light1_3960m</li><li>light2__4680m_vs_light1_3960m</li><li>light2__4860m_vs_light1_3960m</li><li>light2__5040m_vs_light1_3960m</li><li>light2__5220m_vs_light1_3960m</li><li>light2__5400m_vs_light1_3960m</li><li>light2__5760m_vs_light1_3960m</li><li>mn__1000um_vs_NRC-1</li><li>mn__1500um_vs_NRC-1</li><li>ni__0750um_vs_NRC-1c</li><li>ni__1500um_vs_NRC-1c</li><li>o2__-001m_L2H_005_vs_NRC-1c</li><li>o2__0001m_L2H_500_vs_NRC-1c</li><li>o2__0010m_H_947_vs_NRC-1c</li><li>o2__0020m_H_937_vs_NRC-1c</li><li>o2__0045m_H_939_vs_NRC-1c</li><li>o2__0360m_H_903_vs_NRC-1c</li><li>o2__0372m_H2L_079_vs_NRC-1c</li><li>o2__0382m_H2L_048_vs_NRC-1c</li><li>o2__0387m_L_041_vs_NRC-1c</li><li>o2__0392m_L_037_vs_NRC-1c</li><li>o2__0407m_L_030_vs_NRC-1c</li><li>o2__0432m_L_024_vs_NRC-1c</li><li>o2__0477m_L_017_vs_NRC-1c</li><li>o2__0567m_L_011_vs_NRC-1c</li><li>o2__0750m_L2H_540_vs_NRC-1c</li><li>o2__0755m_L2H_825_vs_NRC-1c</li><li>o2__0760m_L2H_847_vs_NRC-1c</li><li>o2__0770m_L2H_852_vs_NRC-1c</li><li>o2__0780m_L2H_847_vs_NRC-1c</li><li>phoR__LO_D_vs_NRC-1</li><li>phoR__LO_L_vs_NRC-1</li><li>phr1__LO_L_vs_NRC-1</li><li>phr1_and_2__HO_D_vs_NRC-1</li><li>phr1_and_2__LO_D_vs_NRC-1</li><li>phr1_and_2__LO_L_vs_NRC-1</li><li>phr2__HO_D_vs_NRC-1</li><li>phr2__LO_D_vs_NRC-1</li><li>sop2_II__HO_L_vs_NRC-1c</li><li>sop2_II__LO_D_vs_NRC-1c</li><li>sop2_I__HO_L_vs_NRC-1</li><li>tbp_A_vs_NRC-1c</li><li>tbp_C_vs_NRC-1c</li><li>tfbG_CHIS_over</li><li>tfb_A_vs_NRC-1c</li><li>tfb_B_vs_NRC-1c</li><li>tfb_C_vs_NRC-1c</li><li>tfb_D_vs_NRC-1c</li><li>ura3__HO_D_vs_NRC-1</li><li>ura3__LO_L_vs_NRC-1</li><li>uv__200jm2_D_060m</li><li>uv__200jm2_L_030m</li><li>uv__200jm2_L_060m</li><li>zim__HO_L_vs_NRC-1</li><li>zim__LO_D_vs_NRC-1</li><li>zim__LO_L_vs_NRC-1</li><li>zn__0005um_vs_NRC-1</li><li>zn__0010um_vs_NRC-1</li><li>zn__0020um_vs_NRC-1</li> </ol> </div> </div> <p><a href="#bicluster019_ratios" onclick="toggleVisible('bicluster019_ratios'); return false;">[+]</a> Show/hide bicluster #19 ratios.</p> <div id="bicluster019_ratios" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 19 ratios</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">14x179</span> <div class="gaggle-matrix-tsv"> GENES dark1__3600m_vs_NRC-1c light2__4320m_vs_light1_3960m VNG0019H__HO_L_vs_NRC-1c ni__0750um_vs_NRC-1c VNG0019H__HO_D_vs_NRC-1c o2__0001m_L2H_500_vs_NRC-1c phoR__LO_L_vs_NRC-1 zn__0005um_vs_NRC-1 gamma__2500gy-0020m o2__0567m_L_011_vs_NRC-1c o2__0780m_L2H_847_vs_NRC-1c afsQ2__HO_L_vs_NRC-1 dark1__0960m_vs_NRC-1c mn__1000um_vs_NRC-1 zim__HO_L_vs_NRC-1 boa4__HO_D_vs_NRC-1 light2__3960m_vs_light1_3960m o2__0770m_L2H_852_vs_NRC-1c dark1__0240m_vs_NRC-1c tfb_A_vs_NRC-1c ark__LO_D_vs_NRC-1 htr2__LO_L_vs_NRC-1 bop__HO_D_vs_NRC-1 gap__LO_D_vs_NRC-1c light2__5220m_vs_light1_3960m light2__5760m_vs_light1_3960m feso4__0080m_vs_NRC-1 gamma4__0000gy-060min gap__HO_D_vs_NRC-1c htr8__HO_D_vs_NRC-1 o2__0755m_L2H_825_vs_NRC-1c feso4__0020m_vs_NRC-1 o2__0382m_H2L_048_vs_NRC-1c phr2__LO_D_vs_NRC-1 gamma__0000gy-0030m kinA2_II__HO_D_vs_NRC-1c dark1__0480m_vs_NRC-1c NRC-1__HO_L_vs_NRC-1 dark1__1440m_vs_NRC-1c gamma4__2500gy-030min tfbG_CHIS_over htr2__LO_D_vs_NRC-1 dark1__1920m_vs_NRC-1c light2__2880m_vs_light1_3960m zim__LO_L_vs_NRC-1 phr1__LO_L_vs_NRC-1 gamma__2500gy-0010m htr1__HO_D_vs_NRC-1 light2__4500m_vs_light1_3960m tfb_B_vs_NRC-1c dark2__2460m_vs_NRC-1c gamma__0000gy-0000m light2__5400m_vs_light1_3960m boa4__LO_D_vs_NRC-1 dark2__2700m_vs_NRC-1c light2__4140m_vs_light1_3960m dark1__3120m_vs_NRC-1c dark2__1500m_vs_NRC-1c phoR__LO_D_vs_NRC-1 zim__LO_D_vs_NRC-1 dark2__3180m_vs_NRC-1c gamma__2500gy-0000m gamma__2500gy-0960m light2__5040m_vs_light1_3960m tfb_C_vs_NRC-1c feso4__0010m_vs_NRC-1b o2__0372m_H2L_079_vs_NRC-1c dark2__0540m_vs_NRC-1c htlD__HO_D_vs_NRC-1 VNG1296C__LO_L_vs_NRC-1 ni__1500um_vs_NRC-1c phr1_and_2__HO_D_vs_NRC-1 o2__0020m_H_937_vs_NRC-1c dark1__1680m_vs_NRC-1c kinA2_II__HO_L_vs_NRC-1c dark1__4110m_vs_NRC-1c gamma__2500gy-0240m o2__0392m_L_037_vs_NRC-1c boa1__HO_L_vs_NRC-1 htr8__LO_L_vs_NRC-1 light2__3780m_vs_light1_3960m o2__0010m_H_947_vs_NRC-1c afsQ2__HO_D_vs_NRC-1 fe__6000um_vs_NRC-1 htr1__HO_L_vs_NRC-1 o2__0407m_L_030_vs_NRC-1c VNG2334C__LO_D_vs_NRC-1 kinA2_II__LO_L_vs_NRC-1c o2__0432m_L_024_vs_NRC-1c tfb_D_vs_NRC-1c light2__3420m_vs_light1_3960m ura3__LO_L_vs_NRC-1 dark1__3870m_vs_NRC-1c fe__2000um_vs_NRC-1 dark2__0060m_vs_NRC-1c light2__1800m_vs_light1_3960m light2__4680m_vs_light1_3960m phr1_and_2__LO_L_vs_NRC-1 htr8__LO_D_vs_NRC-1 dark2__1740m_vs_NRC-1c dark2__2940m_vs_NRC-1c fe__7000um_vs_NRC-1 light2__3600m_vs_light1_3960m VNG0750C__LO_L_vs_NRC-1 feso4__0005m_vs_NRC-1b o2__0360m_H_903_vs_NRC-1c o2__-001m_L2H_005_vs_NRC-1c VNG2334C__HO_D_vs_NRC-1 gamma__2500gy-0480m ura3__HO_D_vs_NRC-1 uv__200jm2_D_060m NRC-1__LO_L_vs_NRC-1 bop__LO_D_vs_NRC-1 dark1__1200m_vs_NRC-1c co__0300um_vs_NRC-1c light2__2160m_vs_light1_3960m light2__2700m_vs_light1_3960m mn__1500um_vs_NRC-1 o2__0477m_L_017_vs_NRC-1c dark1__0000m_vs_NRC-1c gamma__0000gy-0240m dark1__2400m_vs_NRC-1c light2__1620m_vs_light1_3960m htlD__LO_L_vs_NRC-1 gamma__2500gy-0040m uv__200jm2_L_030m light2__1980m_vs_light1_3960m sop2_II__HO_L_vs_NRC-1c zn__0010um_vs_NRC-1 dark1__0720m_vs_NRC-1c gamma__0000gy-0060m htr2__HO_L_vs_NRC-1 o2__0045m_H_939_vs_NRC-1c gamma4__2500gy-050min light2__2520m_vs_light1_3960m sop2_II__LO_D_vs_NRC-1c zn__0020um_vs_NRC-1 dark2__0780m_vs_NRC-1c gamma4__0000gy-040min VNG1296C__HO_D_vs_NRC-1 htlD__HO_L_vs_NRC-1 gap__HO_L_vs_NRC-1c boa4__HO_L_vs_NRC-1 dark1__2160m_vs_NRC-1c gamma__2500gy-0060m uv__200jm2_L_060m dark2__1260m_vs_NRC-1c phr1_and_2__LO_D_vs_NRC-1 co__0000um_vs_NRC-1c gap__LO_L_vs_NRC-1c tbp_C_vs_NRC-1c VNG0019H__LO_D_vs_NRC-1c gamma4__2500gy-120min light2__2340m_vs_light1_3960m light2__4860m_vs_light1_3960m gamma4__0000gy-240min NRC-1__LO_D_vs_NRC-1 VNG0750C__HO_L_vs_NRC-1 o2__0760m_L2H_847_vs_NRC-1c phr2__HO_D_vs_NRC-1 dark2__3660m_vs_NRC-1c dark2__1020m_vs_NRC-1c feso4__0320m_vs_NRC-1 o2__0387m_L_041_vs_NRC-1c dark1__2640m_vs_NRC-1c gamma4__2500gy-010min afsQ2__LO_L_vs_NRC-1 bop__LO_L_vs_NRC-1 dark2__3420m_vs_NRC-1c feso4__0160m_vs_NRC-1 dark2__1980m_vs_NRC-1c cu__1000um_vs_NRC-1 VNG2334C__HO_L_vs_NRC-1 kinA2_I__LO_L_vs_NRC-1 light2__1440m_vs_light1_3960m o2__0750m_L2H_540_vs_NRC-1c tbp_A_vs_NRC-1c gamma4__2500gy-020min sop2_I__HO_L_vs_NRC-1 VNG0212H -1.17877246513485 0.26999816240519 0.507069719639015 1.33682016995740 -0.098779815514094 -0.454387151364832 -0.190974309993915 -0.770482561009933 -1.41584402236868 -0.915359623763937 0.098779815514094 1.88998713683633 0.256827520336644 0.0724385313770022 -0.230486236199552 0.902188981695391 0.770482561009933 1.00755411824376 0.177803667925369 -0.00658532103427291 -0.0197559631028188 0.599264214118836 1.20511374927195 -0.928530265832483 1.25779631754613 1.00755411824376 0.309510088610828 -0.217315594131007 0.0856091734455481 0.586093572050291 0.744141276872841 0.638776140324474 -0.58609357205029 1.04706604444940 -2.94363850232 -0.0460972472399105 -1.16560182306631 1.28413760168322 -0.691458708598657 -0.96804219203812 -0.898237789074827 0.125121099651186 -1.77145135821942 0.941700907901029 0.704629350667203 1.38950273823159 -1.83730456856215 0.138291741719731 -0.388533941022103 -0.217315594131007 0.546581645844653 0.42804586722774 0.00658532103427291 0.717799992735749 0.164633025856823 1.08657797065503 -0.42804586722774 1.1919431072034 0.230486236199552 -0.243656878268098 0.717799992735749 -1.99535227338470 0.441216509296286 -0.125121099651186 -0.204144952062461 -0.770482561009933 -1.20511374927195 0.322680730679373 0.546581645844653 -1.44218530650577 -0.612434856187382 -0.928530265832483 0.665117424461566 -0.889018339626845 0.467557793433378 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0.906645466022247 -0.234110331601989 -0.42139859688358 -0.48950342062234 -0.480990317654995 1.68133783605065 1.26419579065074 -0.344780670177474 0.336267567210129 -0.336267567210129 VNG6302C -0.0209294060194023 0.565093962523862 0.376729308349241 -0.742993913688781 -1.44412901533876 2.39641698922156 -0.711599804659678 -0.219758763203724 -0.073252921067908 0.73252921067908 0.408123417378345 -0.512770447475356 -0.104647030097011 -0.293011684271632 -0.586023368543264 0.073252921067908 2.21851703805664 0.481376338446253 0.104647030097011 -0.941823270873103 0.156970545145517 -0.146505842135816 0.345335199320138 -0.408123417378345 -0.429052823397747 2.15572881999844 -0.502305744465655 1.29762317320294 0.387194011358942 -0.408123417378345 0.627882180582069 -0.952287973882804 -0.0837176240776091 0.63834688359177 -0.586023368543264 0.586023368543264 0.324405793300735 0.0627882180582069 1.67435248155218 0.282546981261931 0.174760540262009 -0.554629259514161 -0.0837176240776091 3.13941090291034 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0.334870496310437 -0.722064507669379 1.92550535378501 -2.29176995912455 -0.282546981261931 1.27669376718354 2.43827580126037 0.115111733106713 0.136041139126115 -0.261617575242529 0.146505842135816 -0.188364654174621 -0.931358567863402 1.39180550029025 -1.25576436116414 3.61032253834689 2.50106401931857 -1.39180550029025 1.60109956048428 -0.282546981261931 -0.345335199320138 -0.104647030097011 1.84178772970740 -0.868570349805195 -1.52784663941637 -0.586023368543264 1.08832911300892 -1.07786440999922 -2.35455817718276 0.376729308349241 0.167435248155218 -0.627882180582069 1.96736416582382 0.784852725727586 3.55799902329839 -0.104647030097011 -0.941823270873103 2.03015238388202 0.899964458834299 0.627882180582069 -1.32901728223205 0 -0.324405793300735 -0.376729308349241 -0.742993913688781 1.07786440999922 -0.345335199320138 -0.983682082911908 -0.313941090291034 -0.784852725727586 1.02554089495071 0.251152872232828 1.21390554912533 3.57892842931779 -0.470911635436551 -0.586023368543264 -0.763923319708184 -1.15111733106713 0.669740992620873 -0.397658714368644 1.23483495514474 -0.586023368543264 -0.136041139126115 1.66388777854248 1.29762317320294 0.303476387281333 -0.408123417378345 0.774388022717885 1.06739970698952 -0.261617575242529 -0.523235150485057 -0.784852725727586 -0.345335199320138 -0.470911635436551 0.784852725727586 1.40227020329995 0.701135101649977 1.30808787621264 -0.596488071552965 </div> </div> <p><a href="#bicluster019_pssm1" onclick="toggleVisible('bicluster019_pssm1'); return false;">[+]</a> Show/hide bicluster #19 motif PSSM #1.</p> <div id="bicluster019_pssm1" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 19 motif PSSM #1</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">15x4</span> <div class="gaggle-matrix-tsv"> POSITION A C G T 1 0.833333 0 0 0.166667 2 0.083333 0.416667 0.166667 0.333333 3 0.166667 0.166667 0.25 0.416667 4 0.916667 0 0 0.083333 5 0.166667 0.5 0.25 0.083333 6 0.25 0 0.166667 0.583333 7 0.75 0 0.083333 0.166667 8 0.166667 0 0 0.833333 9 0 0.416667 0.083333 0.5 10 0.583333 0.083333 0.083333 0.25 11 0.916667 0 0 0.083333 12 0.666667 0.25 0.083333 0 13 0.916667 0 0 0.083333 14 0 0 0.833333 0.166667 15 0.5 0 0.25 0.25 </div> </div> <p><a href="#bicluster019_pssm2" onclick="toggleVisible('bicluster019_pssm2'); return false;">[+]</a> Show/hide bicluster #19 motif PSSM #2.</p> <div id="bicluster019_pssm2" style="display:none;" class="gaggle-data ratios"> <span class="gaggle-name hidden">bicluster 19 motif PSSM #2</span> <span class="gaggle-species hidden">Halobacterium sp</span> <span class="gaggle-size hidden">24x4</span> <div class="gaggle-matrix-tsv"> POSITION A C G T 1 0 0 0.5 0.5 2 0.3 0.1 0.4 0.2 3 0.1 0.1 0.8 0 4 0.5 0 0.1 0.4 5 0.8 0 0 0.2 6 0 0 0.2 0.8 7 0.6 0 0.1 0.3 8 0 0.5 0.5 0 9 1 0 0 0 10 0 0.2 0.5 0.3 11 0.3 0.4 0.1 0.2 12 0.2 0.5 0.1 0.2 13 0 0 0.5 0.5 14 0.9 0 0.1 0 15 0.2 0.2 0.1 0.5 16 0.1 0.8 0.1 0 17 0.2 0 0.7 0.1 18 0.4 0.4 0.2 0 19 0 0.5 0 0.5 20 0.5 0.3 0.1 0.1 21 0 0 0.2 0.8 22 0.3 0.6 0 0.1 23 0.2 0.3 0.5 0 24 0.6 0.4 0 0 </div> </div> </td></table> </html>