[+] Show/hide bicluster #342 rows and columns.
bicluster 342
Arabidopsis thaliana
7x68
[+] Show/hide bicluster #342 rows (genes).
bicluster 342 genes
Arabidopsis thaliana
7
[+] Show/hide bicluster #342 rows (short gene names).
bicluster 342 short names
Arabidopsis thaliana
7
short_name
[+] Show/hide bicluster #342 rows (long gene names).
bicluster 342 long names
Arabidopsis thaliana
7
long_name
[+] Show/hide bicluster #342 rows (NCBI RefSeq gene IDs).
bicluster 342 NCBI RefSeq IDs
Arabidopsis thaliana
7
[+] Show/hide bicluster #342 gene upstream sequences.
bicluster 342 upstream sequences
Arabidopsis thaliana
7
upstream
[+] Show/hide bicluster #342 columns (arrays; conditions).
bicluster 342 arrays
Arabidopsis thaliana
68
[+] Show/hide bicluster #342 ratios.
bicluster 342 ratios
Arabidopsis thaliana
7x68
GENES Heat_1_R UV_05_S Osmo_05_S UV_1_R Cold_05_R Drougt_1_R UV_12_S Oxid_3_R Heat_3_R Cold_12_R Oxid_1_R Heat_24_S NaCl_1_S Cold_3_S Cold_12_S NaCl_05_R Oxid_24_R Wound_24_S Heat_6_S Cold_6_R Cold_05_S Cold_3_R Osmo_24_R Oxid_1_S Osmo_6_R NaCl_1_R Wound_05_S NaCl_6_S Drougt_05_R Wound_1_S Gtoxic_24_S Cold_24_S Gtoxic_12_R Heat_05_S Wound_3_R Oxid_05_S UV_6_R Heat_05_R Drougt_05_S Gtoxic_05_R Cold_6_S UV_24_R Osmo_12_R NaCl_24_S UV_3_S Osmo_1_R Osmo_3_R Gtoxic_24_R UV_12_R Wound_12_S Wound_12_R UV_05_R Gtoxic_1_S Osmo_05_R Wound_1_R Wound_6_S Gtoxic_1_R Oxid_6_R Gtoxic_6_R NaCl_12_R Cold_1_R Heat_12_R Gtoxic_6_S Drougt_3_R UV_24_S Oxid_3_S Heat_3_S Drougt_24_R
AT1G52930 0.115698031555072 0.532237577095062 0.879776591281808 0.125074662097 0.644032584169778 -0.0923179821768452 2.29140255308171 -0.0568352448619342 -0.537827126608608 0.111132657269733 0.167047889452374 1.19138272791685 -0.777954489826062 0.992522096139762 2.18206140160201 0.0298417359176196 -0.121536600310493 -0.526492650380741 2.27993799309055 -0.0254408440186818 0.641249981667981 0.505278979969362 -2.0892716281479 0.59195490046764 -1.30602669464021 -0.555316663131855 0.750658703888932 -1.31204450418731 0.125539031405335 0.0243158291017521 -0.273468225843881 2.14751779753344 -0.616449389385023 0.0801380728413394 0.0202140365794483 0.639183938877286 -0.137959569720386 0.409070364240064 0.259836654267520 0.233573825979756 0.75417722874223 -0.165992343131759 -2.04481661638815 -1.77554324735928 1.82229658904160 -0.134350665974755 -0.137941180214857 -1.09616566399722 0.365603520104543 0.8083064937731 -0.198052174566835 0.0413669594904208 -0.946331382952574 0.39912776620458 0.181798677482007 1.28522880296043 -0.245277749713746 -0.0602544195845261 -0.186427413659937 -2.44374861626033 0.178240150814445 1.01294432548361 -0.712393641649667 -0.116761300015569 0.381177346229246 -0.625783665159719 1.58591929706488 0.477731547487593
AT3G03920 -0.104712234237601 0.484714901654208 1.16387443204197 -0.00389412838152165 0.384441936567539 0.0577813725874169 2.39151213149946 -0.0313029555359386 -0.134158299696387 -0.0830534133741345 0.252799375186809 1.64201959191567 -0.501163757859281 0.72862733298774 2.1786060340236 0.195181007195901 -0.473361564029554 -0.117519004590204 1.68774060492750 -0.0622623576383323 1.17549058494295 0.166454328547795 -1.70233495648854 0.123585195664221 -1.20003972095226 -0.425639907591778 1.22059275678535 -1.39247375418912 0.131304597666231 -0.127628431852976 0.114446725396245 2.35444160354734 -0.731975350377819 0.897362618885197 -0.172480884592769 0.945215455907297 -0.350652787071095 0.351429958628256 0.469009494495734 0.271727030144972 0.881054244265143 -0.323192749701082 -1.62519278498801 -0.948606422035882 2.03138813177236 -0.141636824017631 -0.621139547010536 -1.26877150816673 -0.165713895943383 0.807054941082674 -0.463080511419236 0.0684971010822138 -1.19593361364625 0.577357530027295 0.148722353703593 1.34215031970808 0.055797058800732 0.0268746943928891 0.251304996171091 -2.56471943883638 0.151430157683619 0.72270740470898 -0.954237100135357 0.00545001254399811 0.923157002047267 -0.592836773323359 1.71972241314834 0.539881764769755
AT3G10530 -0.540039022111557 0.62880792244234 1.00151033064535 0.201121886552342 0.127676292750404 -0.333334183000923 2.48267594350040 0.00766168733480709 -0.717964804960503 0.234702501638353 0.279153967439804 0.391298644893984 -0.917878110312776 0.653593223840434 2.55966179262823 0.0138443070607720 -0.784645534003524 -0.475302662358678 1.08927424222872 0.167651094918723 1.06111757564789 0.0816087209509157 -1.86725381861213 0.140695995094653 -1.48864777359698 -0.402466430371340 0.893914273477388 -0.576830863458892 0.459497801763698 -0.667143191166947 -0.132277978472428 4.01580430902199 -0.731642565433887 0.456879323948296 -0.958122933261272 0.334628385512052 -0.42791691060903 -0.145727370022475 0.497390142504344 -0.369513124080818 0.295534001029254 -0.627888812156274 -2.44571876019714 0.196159249437422 3.06398971277367 0.233426945362205 -1.23253319906885 -0.998276953766593 0.105288323165991 0.587730158078595 -0.107280150880014 -0.159614009536587 -0.752113709200817 0.291755012893393 -0.170390530712808 0.886600382310876 -0.410192487208973 -0.081592935005874 -0.0546628671803707 -1.38214383613002 -0.0650354417602466 -0.267785035276712 -0.337312286578616 -0.130202202952209 0.511077856397341 -0.172725551037155 2.95875063510437 0.649269216623211
AT3G15460 -0.307123348433493 0.834549645148974 0.279671905677332 0.0652821992731264 0.383219741103734 -0.398503474521339 2.1311328561491 -0.605104370134777 -0.78509680395779 0.00436333284492395 0.166651566876731 0.778524853018828 -1.04763923278061 1.72659199207053 2.11066073002137 0.335459593962004 -0.595082331899895 -0.0722482136413653 1.56080795476870 0.197778189258521 0.557225720844115 -0.188482116305591 -2.11913863635922 0.40578514929672 -1.50315123312467 -0.504042705878567 0.571971559722328 -0.183493647252513 0.043115079377442 -0.481757934206747 0.108225009825539 3.32258772445448 -0.558724464093074 0.341401578946517 -0.542826329580259 0.509773860837453 -0.416561434458063 0.323563408320251 0.436631430425676 -0.0228685264449886 1.09180255607591 -0.568816521416696 -2.79461461778322 -0.000677619732439898 2.93559566972360 -0.0455240674055234 -0.658317850043247 -0.322211674955913 0.224862002693777 0.697440802861612 -0.152321690214578 0.636784556524553 -1.29804190995783 1.08760807706684 0.18386976174167 1.37522571346843 -0.458237503370206 -0.525170575729798 -0.00954517734706013 -1.81462654910316 -0.171694925469192 0.0403855463603758 -0.104626500418745 -0.623910426980408 0.70079350391249 0.275385505418247 1.99776678631404 0.31795878005995
AT3G23620 0.199791253372214 -0.301489507882805 0.030729813303567 -0.0116170415345255 0.0538849879949383 0.232488785236937 2.30724070263121 0.117972246448862 0.726350153359008 0.477818882036736 0.0413878866165902 0.745749312826499 -1.2724715307791 1.42291751528372 2.91370017169059 -0.204362736056858 -0.519429952208006 -0.435888101070975 1.62959849140034 0.0305961622611766 0.359185078898146 0.732221402735632 -2.10460333031744 0.932668374341335 -1.41744137165618 -0.508351956138145 0.583402017135226 -0.332579590694279 -0.114705326840784 0.239069651505098 -0.446376843093765 4.136457663359 -0.605378248346356 -0.344223033756464 0.13905509393086 0.330340230462288 -0.0928583713986049 -0.0518952913575334 0.0134620918461232 -0.189686173938408 1.85215278825840 -0.230725202088547 -1.94814031882028 -0.235185868304297 2.92567417986551 0.100142880490000 -0.402762470469437 -0.848736438670331 0.493935183909866 0.739394174623592 0.427708050948005 -0.356807710194017 -0.316845084959882 0.396359020468653 0.315094547335195 1.37089402948501 -0.407668641944191 -0.0467044148445473 -0.569516012682587 -1.40511247741543 0.0676747025288785 0.378904058006654 -0.418428051372198 0.268123531662988 0.155870495623073 -0.143997627282516 2.75701629275006 0.632467191774776
AT4G04940 -0.214019531232034 0.674169843881484 0.468143441913497 0.0580359761406725 0.185756981793687 -0.332382350655273 2.46100306462259 0.117239363384056 -0.929805821568766 0.274607498489341 0.330252410199658 0.616072355010812 -1.34571508777882 0.870604526629997 1.73670756757607 0.107171167942622 -0.80192316999976 -0.266355488836996 1.4842360839503 -0.353072031749635 0.761648670287837 -0.0615490850738269 -2.13717206292278 1.00570938808461 -1.98832141272023 -0.533348511351268 1.03059270275178 -0.843872165965675 0.225664144866647 -0.256770915760853 -0.113366863954090 3.21870298559266 -0.726549648857823 0.103410819629681 -0.283694296656915 1.02603371202427 -0.218482837484957 0.298998292086371 0.462156962260842 -0.0872590023708411 0.511605853601194 -0.130607652687472 -2.17204779493777 -1.19490887378714 3.09373669511695 0.133730792963682 -0.790661013494684 -0.993843038878835 0.825783569505452 0.886573972362318 0.084416518091913 0.221682648161169 -0.674905932541946 0.531652416411112 0.112141806782357 1.63686554141299 -0.183319967430946 -0.475107930383459 -0.644659569356042 -1.00095151944461 -0.265477052950094 0.783796119749967 -0.920460113525758 -0.455723733265562 0.405385562464521 -0.194418033151835 2.53724041269857 0.497136418482176
AT4G15770 -0.336233676716125 0.842491254416138 1.04024670686262 0.0340136419827717 0.591948270012611 -0.437081071603083 1.92991967829201 -0.365542539439223 -0.3815019419212 0.315737632816648 0.0640348419006339 0.84105045106735 -0.741534239840573 0.746736842726706 2.69995913499136 -0.142292242206881 -0.400327481926421 0.612632289022784 1.01039828315446 0.266236322651455 0.663250766105853 -0.286027430076261 -1.80163953104799 0.298699020923184 -1.62696046186147 -0.634775410476972 0.990384772564474 -0.801092419543174 -0.31750212824086 0.124286473050632 0.120825686475469 3.55936438541638 -0.320576749852074 -0.195064543466078 -0.0936507669392885 0.747718157543183 -0.251109727732686 0.180010119479352 0.170746484718073 0.254354907722346 0.424351840990962 -0.0722659291483318 -2.14789104426621 0.220285005163351 2.70437759541462 -0.166657272872216 -0.415043468042048 -0.570560713589783 0.263339334220924 0.898200155049182 -0.127632687575622 0.420061728609197 -1.38498985634528 0.43880011341022 0.222425315672283 1.24593958661941 -0.183620073092711 -0.137735362085451 -0.391180541655988 -2.32629304132385 0.258242551298151 0.00164231199971992 -1.26015595974005 -0.274969601619804 1.07068994655623 -0.638429243762638 2.03161362493664 0.308327580343266
[+] Show/hide bicluster #342 motif PSSM #1.
bicluster 342 motif PSSM #1
Arabidopsis thaliana
12x4
POSITION A C G T
1 0 0 0.142857 0.857143
2 1 0 0 0
3 0 0 1 0
4 0 0 1 0
5 0 0 1 0
6 0 0 0 1
7 0 0 0 1
8 0 0 0 1
9 0.142857 0 0 0.857143
10 1 0 0 0
11 0 0.285714 0.714286 0
12 0 0.142857 0.571429 0.285714
[+] Show/hide bicluster #342 motif PSSM #2.
bicluster 342 motif PSSM #2
Arabidopsis thaliana
11x4
POSITION A C G T
1 0 0.142857 0 0.857143
2 0.428571 0.571429 0 0
3 0.714286 0.142857 0 0.142857
4 0 0 0 1
5 0 0.142857 0.857143 0
6 0 0.142857 0.857143 0
7 0 0 1 0
8 0 1 0 0
9 0 0.857143 0 0.142857
10 0 0 0.714286 0.285714
11 0 0.428571 0.428571 0.142857
|