[+] Show/hide bicluster #111 rows and columns.
bicluster 111
Arabidopsis thaliana
9x71
[+] Show/hide bicluster #111 rows (genes).
bicluster 111 genes
Arabidopsis thaliana
9
[+] Show/hide bicluster #111 rows (short gene names).
bicluster 111 short names
Arabidopsis thaliana
9
short_name
[+] Show/hide bicluster #111 rows (long gene names).
bicluster 111 long names
Arabidopsis thaliana
9
long_name
[+] Show/hide bicluster #111 rows (NCBI RefSeq gene IDs).
bicluster 111 NCBI RefSeq IDs
Arabidopsis thaliana
10
[+] Show/hide bicluster #111 gene upstream sequences.
bicluster 111 upstream sequences
Arabidopsis thaliana
9
upstream
[+] Show/hide bicluster #111 columns (arrays; conditions).
bicluster 111 arrays
Arabidopsis thaliana
71
[+] Show/hide bicluster #111 ratios.
bicluster 111 ratios
Arabidopsis thaliana
9x71
GENES UV_1_R Oxid_1_S Drougt_05_S NaCl_05_R Osmo_1_R Oxid_6_S Osmo_12_R Wound_24_S Gtoxic_1_R Wound_3_S Cold_6_R Wound_12_R Wound_24_R NaCl_1_R Oxid_24_R Osmo_6_R Oxid_12_S Gtoxic_24_R Gtoxic_24_S Cold_05_R Heat_1_R Cold_12_S Drougt_05_R Gtoxic_12_R Oxid_3_S NaCl_3_R Osmo_3_R Heat_12_S Heat_24_R Wound_1_S UV_05_S Wound_05_S Cold_12_R Wound_6_R Osmo_24_S Osmo_24_R Cold_3_R Osmo_12_S NaCl_1_S UV_12_R Cold_24_R Drougt_3_R Drougt_12_R UV_05_R Cold_05_S Oxid_24_S Gtoxic_05_R UV_12_S Drougt_24_R Heat_1_S Drougt_1_S Heat_12_R Drougt_1_R Oxid_05_R Osmo_05_R Gtoxic_3_R Gtoxic_05_S Wound_1_R Gtoxic_12_S Cold_1_R UV_6_R Gtoxic_6_R Heat_3_R Osmo_3_S NaCl_24_S Oxid_3_R UV_24_R Heat_05_S UV_3_R UV_1_S Drougt_12_S
AT1G29250 0.317692179442874 0.473751277282285 0.242245088528308 0.0107131129554999 -0.263379452053694 -0.112535770169698 -2.8380217581169 0.159600927414869 -0.0637276095929598 0.78483741786615 0.0339115047789954 -0.54362634073698 0.0911021012037211 -0.657576737207616 -0.694299059833743 -2.01287551152113 -0.121500884393653 -0.986500741384786 -0.384178896758965 0.321760637004743 -0.24364880502128 0.53773208723079 -0.09561125495347 -0.93482665887664 -0.409940793184768 -2.56494570695829 -1.06548013512840 0.0188884626320771 0.759671775657421 0.0247875477546394 0.486689536108598 1.12943516735717 -0.225169755908366 -0.369195526641017 -3.12010648629899 -2.55136035730346 0.218590968821552 -1.86537008710943 -0.405446680229489 0.439000072154307 -0.487361312766144 -0.40477262879964 0.187962024169964 0.300379378792637 0.678671019245017 0.129645888607703 0.139668781051821 1.62348097132952 0.715331286082708 -0.607409527566856 -0.554800213372074 -0.0766439578124467 -0.413248221122996 0.141020541745384 0.214656950302813 0.41620293196695 -0.166051462839217 0.547196932533441 -0.485099215494034 0.0712420651226904 -0.268957166444324 -0.157279140117519 -1.62550388084347 -1.35450106626125 -1.15100035455863 -0.109937042993044 0.151566831999242 0.278216809087032 0.0426117809123014 0.588153916685012 -0.499024507121875
AT1G48630 0.406304556705197 0.83725894463459 1.00033032678499 0.382550696224339 0.295282663909460 -0.102466172363504 -2.50944237683354 0.00673520094810231 -0.0436653837267197 0.534138905266032 -0.280662051593577 -0.395099865774742 0.0753188884371892 -0.0759517239655447 -0.68677272873854 -1.59386535677073 0.25596740585479 -1.28066337299539 -0.0699223192355767 0.341995296445225 -0.0775206810713753 1.1583918970266 0.209293784142383 -0.666984680750937 0.275829666816739 -0.953832292641704 -0.182590560323355 0.0947719718943629 -0.117436793897505 0.0412363403077146 0.785267345372676 1.05914742103048 -0.227794898144981 -0.651720912354582 -3.87617751528871 -2.59365374661401 -0.0800597873491094 -2.23171474752779 -0.537281189519009 0.304779584148996 -0.525977827201158 0.0760732387507233 0.671781379735852 0.057610695112774 0.816040364486205 0.728442428597833 -0.00673520094810231 1.98458179474040 0.822067584195515 -0.717794512022097 -0.132886004047049 -1.12474949669470 -0.0587476831347186 0.175184212575607 0.792312396068315 0.0741947169000495 0.296224735997737 0.428804284420246 -0.59749034919797 0.233431940529146 -0.203603713984160 -0.400983392307379 -2.2550769624878 -1.10416091932061 -0.507745177100285 0.192510234559657 -0.0561524140532876 0.600065590362782 0.140111798269640 0.613538790467259 0.347023167161119
AT1G56110 -0.296131549193271 0.453845639120107 1.14367477906204 0.203531675659335 -0.087585754364864 0.32487921386105 -2.46576850185969 -0.936472988253702 -0.54403096427096 0.549297102732805 -0.00861125859769864 -0.0171698077020497 -0.316095242762639 -0.458061437649269 -0.662122669295568 -1.87389831460204 0.586750506969475 -1.04123044747924 -0.00572876553530914 0.451152179066306 -0.433713592807054 1.92145641823098 0.665463142319751 -0.432253545403026 0.65291078850849 -0.92847006561818 -0.442800284298908 -0.0175314311628728 -0.0486195762367270 -0.587295879821229 0.734728173379373 0.827959868710467 -0.305449347975379 -1.03956699624456 -2.34245701671097 -2.37962681427281 0.992473956023887 -0.816933571990855 -0.707084415566807 -0.0938827683445178 0.372450461647606 0.306426259526876 0.569813340660700 0.161404604165765 0.824629995364866 1.28974323494997 -0.164426425607824 2.39231750308182 0.803912603006118 -0.871616674199201 -0.265183877282912 -0.355427187820183 0.0157239951673498 0.688071518264466 0.819341492678105 -0.0900629908630652 0.448027660782088 -0.317639928468825 0.0912707671527764 0.205438791273249 -0.715980000770863 0.0706032478189487 -1.62351626662952 -0.876201324857906 -0.381978668916055 0.379148428051449 -0.242599302336337 1.11660284154295 0.358210285528991 0.395883777159788 0.132878667594439
AT2G19670 0.323778892442738 0.481991692304958 0.734447551424261 0.383567431835123 -0.0183664638593600 0.399289492702763 -2.36729944335577 0.276429806737336 -0.0200378788386431 0.337977009374478 -0.254716410647187 -0.334532585980234 0.00422985544581204 -0.369690801104532 -0.790273799669711 -1.37993573841430 0.157647756914273 -1.18325274500062 -0.211504575286636 0.312002283390271 0.459965023287671 0.71847430978148 0.682422507654416 -0.859367317564614 -0.533598961519612 -1.21778989394358 -0.75606672557322 0.89736691894865 1.21413149767633 -0.0526953577946864 0.672489999350888 0.969123662649013 -0.402879833277737 -0.680749897971747 -4.27399228899912 -2.21732222778045 0.226461008369022 -2.37131645266605 -0.465856034602737 0.281775591841577 -0.0567950385839836 0.0404035248007797 0.503072169958051 0.161931823585097 1.07087495381102 0.494956132081719 0.482884107051791 2.05195999113013 0.73008783433921 -0.829328559842264 -0.235296429781155 0.80506316258719 0.161385961363075 0.50259455298459 0.502034632420944 0.0769692875764527 -0.53370627157358 0.285800710918167 -0.360710069840007 -0.136822902138057 -0.231396092360250 -0.128933625948128 -0.805805573469578 -1.72505207262239 -1.14585121612251 -0.335779573228369 -0.155293233484894 0.366757044818561 -0.00703351626489795 0.426449429294546 -0.00422985544581198
AT3G06530 0.0591174580666051 0.596198715140337 0.699285755489352 0.54554687958486 0.199880781319639 -0.812536011692743 -2.57221213970827 -0.00847193209760692 -0.188208559468300 0.71505310160414 -0.405431631428469 -0.465325914637172 -0.470708243567777 0.0271279052801745 -0.189419787628189 -1.75311839633544 -0.479575524941226 -1.11320286477101 -0.11687662198763 0.316313899515819 -0.0379156574371919 1.67533171430099 0.234408608352008 -0.607355523361167 -0.930687767443483 -0.896383392267298 -0.537000599444872 0.465662254326651 0.38902832606116 -0.541587915576628 0.672602770838617 0.90965403288809 0.200682425639319 -1.10978662325101 -2.47282401558289 -1.96680912286715 0.419602049150096 -1.09705232362784 -0.76624707460978 0.364734682614843 1.12258079285869 0.00847193209760688 0.462599647071028 -0.0304668776529484 0.702292282434387 0.473661419290392 0.121298222002722 1.95886214722063 0.327013868182324 -1.15880314505285 -0.532053543735321 0.0370957102507523 -0.0279971411062875 -0.173837370737610 0.615370479450041 -0.0392610080241857 0.0316851998078911 0.225619181163854 -0.767740126063156 -0.127926729397804 0.0280696400688706 -0.473965080191782 -0.913564203414563 -1.39071179343237 -1.63887079240954 0.206129778772457 -0.259666803071458 0.566254729963409 0.599984264388573 0.613545969616383 -0.290166757436429
AT3G18130 -0.00570117686547092 0.748900383747783 1.02946205341568 0.375719388283451 0.276539362526591 0.00385139430080703 -2.58891653299894 0.143140102089522 -0.380498614498951 0.245786189719083 -0.153757784908877 -0.526281689070586 -0.287107905430944 -0.375479250339214 -0.78025539989029 -1.67086111588661 0.344226334413473 -0.937030891560768 -0.200079431036174 0.251126317204426 -0.313709874900712 1.33956666737953 0.58064788707577 -0.80409258894492 -0.0469575411326828 -1.48415577824158 -0.336588945962634 0.147747869042672 0.285002219357863 -0.00385139430080703 0.844622457201931 1.05278158006388 -0.180114869109183 -1.04761041869606 -3.34860168136535 -2.33711884142042 0.203134420815211 -1.75329829513124 -0.242825421940921 0.206798270655534 -0.157204892488207 0.402743221297940 0.753208082912706 0.226027091540770 0.907590863309195 0.683326671736586 0.0476041925815971 1.79373911641327 0.67013639830935 -1.04999226241567 0.0935338183208534 -0.184066868957513 -0.073928406235075 0.320260827547656 0.577571516829457 0.193398020552628 0.357740244827753 -0.261914334479032 -0.870239106307584 0.0713017320403964 -0.357617595191987 -0.492755748043265 -2.4788973850647 -0.9050724247811 -0.492190566722595 0.126390643720679 -0.148814858925735 0.600963060051246 0.277128166318403 0.489338581032868 0.247399849550779
AT4G12600 0.175652519282213 0.38970548391857 0.41831060470003 -0.0440593937400208 0.136531621215535 0.0907941420188506 -2.47129166489851 -0.867964760985253 0.149190204795733 0.50169755259474 -0.292812061541671 0.0346461904034371 0.00377518316917717 0.0383080647500538 -0.319079190988294 -1.77735385322836 0.651460568691101 -1.29141718246494 -0.436595382956982 -0.0823050685547177 0.285364684915846 1.31408782415052 -0.00483850261103353 -0.837966117296447 -0.0160130032253594 -1.91001654928921 -0.559565099716772 0.0352275904902592 0.647839930507052 -0.0921591419716306 0.717746076834225 0.520487685300327 -0.518004291985736 -0.449154867636629 -4.20670680702547 -2.86479404481153 0.0677381423927104 -1.36625994914242 -0.156796718048153 0.265636141527298 -0.326317881537249 -0.191844427359005 0.310724900728861 0.00826948989151734 0.696245900946881 0.678387283406545 0.00109583148563952 2.07733495736791 0.699741807593284 0.0517767588840413 -0.396191000267913 -0.091566079115485 -0.00109583148563948 0.0557583081428213 0.0555335915983776 0.196096464577684 0.0437011087619874 0.169589490336314 -0.723166147086717 0.169606858018771 -0.315665039726518 -0.0179520131388548 -0.366131569690508 -1.29034424474254 -0.999992144644064 -0.197644758024476 -0.231167188484445 0.587738896198845 -0.302456216388478 0.766509276980102 -0.057336142760813
AT4G25630 0.0387450990180677 0.345077722908138 1.10884017166062 0.190786949024236 0.169082757386606 -0.00819929339433088 -2.23127854166627 0.0584399622771549 -0.253517697200013 0.592866960209205 -0.141277672334290 -0.080558012022274 -0.350291429258067 -0.0377604856031197 -0.515967026443139 -1.73057483750705 0.53902192039006 -1.29109311359646 0.109286535021550 -0.16634996883891 -0.356904649603603 1.97376466447817 0.342252483450381 -0.867397588330076 0.356001435137347 -1.38918289944766 -0.532976902789089 0.515897982547277 0.559932727596576 -0.757702655715404 0.447156393929188 0.638690331093593 0.0816826797124245 -0.761936020795217 -2.86494711115884 -2.19074802653314 0.201454442297523 -1.01384249590470 -0.909483503360052 0.0353698177957035 0.506289502353058 -0.0349591756431243 0.628985813682093 -0.182902877819053 1.10701910944743 1.39768978602294 -0.343212319422883 2.24687696670124 0.55999119837042 -1.38029852410995 -0.228384295058142 0.390291343005442 0.239578141264927 0.109282967418991 0.419708221263971 0.078177226511354 0.261338370823345 0.0058722351549363 0.034085894871177 -0.145722473667934 -0.691371691532255 -0.180870747210387 -2.19365884854902 -0.741258489406044 -1.34673575000665 -0.0367594806692514 -0.271954153187685 0.342642535510879 -0.305226673331833 0.315551073222409 0.275055949803996
AT5G20160 -0.0483480351659365 0.553725905027125 0.912614231631826 0.141753410657569 0.0072592452310845 -0.236797636019556 -2.29090250677085 -0.0678076225064352 -0.110534317783822 0.58516380944606 -0.222723624316471 0.320759068206555 -0.0162563519424283 -0.403276486397291 -0.476773507075387 -1.68643325448462 0.605156769206254 -0.594160539740413 0.550493647182008 0.0251829588882356 -0.169896941457249 2.75247811685604 0.0898861293165721 -0.412834611265086 -0.222923644637538 -1.22326217832991 -0.438481599941192 0.56664172347415 1.10950616677411 -0.368082621796326 0.87907364796186 0.827287880068719 0.246103240852118 -0.260105125134716 -1.65315438518342 -2.19259671531861 0.239628877326636 -0.820120559003554 -0.588227903000612 0.459504079340144 1.58891941998328 -0.192302622596422 0.515867992741757 0.361221664080096 1.19833892451048 1.46977627484196 -0.0445360376470983 2.51144446351908 0.559022649740092 -0.354136424573615 -0.494007419170496 0.84158022931041 -0.26302886568923 0.125209483104984 0.194493639595934 0.163478282418365 -0.0456753961122558 0.0407505984381547 0.160177318016431 -0.261910741673289 -0.258626181035859 -0.0303493343647724 -0.425331036705714 -1.0825032665896 -0.128121957289848 0.0380167829101403 -0.115066352210941 0.936513111920705 -0.118579629736960 0.479790105867612 0.119989346220295
[+] Show/hide bicluster #111 motif PSSM #1.
bicluster 111 motif PSSM #1
Arabidopsis thaliana
9x4
POSITION A C G T
1 0 0.111111 0 0.888889
2 0 0 0 1
3 1 0 0 0
4 0 0 1 0
5 0 0 1 0
6 0 0 1 0
7 0 0 0 1
8 0 0 0 1
9 0 0 0 1
[+] Show/hide bicluster #111 motif PSSM #2.
bicluster 111 motif PSSM #2
Arabidopsis thaliana
12x4
POSITION A C G T
1 0.857143 0.142857 0 0
2 1 0 0 0
3 0 0 0 1
4 0 0 1 0
5 0 0 1 0
6 0 0.428571 0.571429 0
7 0.142857 0.571429 0.285714 0
8 0.142857 0.285714 0.428571 0.142857
9 0.714286 0 0 0.285714
10 0 0 1 0
11 0 0 1 0
12 0.142857 0.428571 0.428571 0
|