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bicluster 147
Methanococcus maripaludis S2
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bicluster 147 genes
Methanococcus maripaludis S2
16
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bicluster 147 short names
Methanococcus maripaludis S2
16
short_name
[+] Show/hide bicluster #147 rows (long gene names).
bicluster 147 long names
Methanococcus maripaludis S2
16
long_name
[+] Show/hide bicluster #147 rows (NCBI RefSeq gene IDs).
bicluster 147 NCBI RefSeq IDs
Methanococcus maripaludis S2
32
[+] Show/hide bicluster #147 gene upstream sequences.
bicluster 147 upstream sequences
Methanococcus maripaludis S2
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upstream
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bicluster 147 arrays
Methanococcus maripaludis S2
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bicluster 147 ratios
Methanococcus maripaludis S2
16x57
GENES H_vs_Leu_3000070261A.1 H_vs_PO4_3000070253B.1 H_vs_PO4_3000070254B.1 S2_vs_S40_BR1_3000069792A S2_vs_S40_BR1_3000069793A S2_vs_S40_BR1_3000069793B S2_vs_S40_BR3_3000070265A S2_vs_S40_BR4_3000070272A S2_vs_S40_BR4_3000070272B leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR2_3000070244A leu_vs_PO4_BR2_3000070244B leu_vs_PO4_BR4_3000070257A leu_vs_PO4_BR4_3000070257B mma_0070m_0.2 mma_0492m_0.598 mma_0783m_1.23 mma_0849m_1.4 mma_0912m_1.56 mma_1444m_1.58 rapid_H_vs_slow_H_3000070036A.3 rapid_H_vs_slow_H_3000070036B.3 rapid_H_vs_slow_H_3000070037A.3 rapid_H_vs_slow_H_3000070037B.3 rapid_H_vs_slow_H_3000070038A.2 rapid_H_vs_slow_H_3000070038B.2 rapid_H_vs_slow_H_3000070040A.2 rapid_H_vs_slow_H_3000070040B.2 rapid_H_vs_slow_H_3000070041A.1 rapid_H_vs_slow_H_3000070041B.1 rapid_H_vs_slow_H_3000070042A.1 rapid_H_vs_slow_H_3000070042B.1 rapid_PO4_vs_slow_PO4_3000069786A.2 rapid_PO4_vs_slow_PO4_3000069786Alow.2 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069787A.2 rapid_PO4_vs_slow_PO4_3000069787Alow.2 rapid_PO4_vs_slow_PO4_3000069787Blow.2 rapid_PO4_vs_slow_PO4_3000069789A.3 rapid_PO4_vs_slow_PO4_3000069789Alow.3 rapid_PO4_vs_slow_PO4_3000069789B.3 rapid_PO4_vs_slow_PO4_3000069789Blow.3 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Alow.3 rapid_PO4_vs_slow_PO4_3000069790B.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023A.1 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023B.1 rapid_PO4_vs_slow_PO4_3000070023Blow.1 rapid_PO4_vs_slow_PO4_3000070024A.1 rapid_PO4_vs_slow_PO4_3000070024Alow.1 rapid_PO4_vs_slow_PO4_3000070024B.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0253 0.230401824454005 -1.15785754313527 1.24255224408380 0.0279201406146144 0.63730194824455 0.839826451716098 -1.37897176795429 1.20630856762119 0.794514788506776 -0.538813949568187 0.419074016465197 0.41191904004372 0.732038089153358 0.773781126830282 0.852162528105356 0.78895303572759 0.126515460230992 0.05128926248866 -0.046180770208913 -0.00802763072531673 -0.709175493966708 -2.78488726845797 0.10095756440983 0.0989935487767482 0.0334094054194449 -0.0334094054194449 -0.417256044634797 -0.518886154638697 0.633421345735743 0.636813876864361 -0.338283106965277 -0.458477664540625 0.446363300278378 0.338747512926919 1.48870091764406 1.57192357502296 1.45033172736007 1.60907071359697 -1.19508304780637 -1.22888744452048 -1.44406644313256 -0.516452196020268 -0.493079510769552 -0.599131873518952 -0.535429432004821 0.352382225065133 0.519621462780987 0.563211819230869 0.704155735946051 -1.62196851819137 -1.18822280452240 -1.71423958507198 -1.12032457984230 0.951954986385432 1.51133405317993 0.851858380181879 1.51339385895691
MMP0263 -1.55435901276736 -0.214703537721626 -0.0404699360760394 0.185020845835276 -0.236783104954324 0.674392823793575 -1.56809270780905 -0.40294436798613 -1.04160648793746 -1.05834975095826 0.811937506988772 0.87417742413729 0.357676868910364 0.395104381208236 0.890034022282692 1.02185943593611 0.839358016423784 0.229669874335945 0.103308476092222 -0.103308476092222 -2.51859713016296 -0.528124885918103 -0.755768203973151 -0.705915906198614 0.689704692404168 0.620030437316896 -0.742819171995583 -0.390436502543119 0.553255786418212 0.505251717545201 -0.706749055784355 -0.573941308062894 0.0799669248398526 0.31296675655001 1.23619978155891 1.24730935409001 1.34490370117061 1.20693953441852 -1.19072858356393 -1.53586296871086 -1.51721805139439 -0.716897932357162 -0.981274773600272 -0.603694043608608 -1.02386970537313 0.699711575291845 0.682588481966831 0.752636545090167 0.770787429229651 -0.384289502796142 -0.820459231118049 -0.349005227538672 -0.63225507204419 0.964581936157534 0.47854840644237 0.866429525936463 0.433035343492129
MMP0357 -1.08413040640465 0.822103685171005 -1.04839584456544 0.314945553963466 1.26249197915853 1.35461552858466 -0.936692558260834 -0.829909478295336 -0.314945553963466 -1.17224524834636 0.860589581801765 0.96064758488699 0.911296023870492 0.73832020241543 0.181019805377857 0.649593160053837 0.255114352051351 -0.00377116700994806 0.115581172683273 0.0549707047035673 -2.48248110135041 -1.58062859433174 -0.487924687560352 -0.464807416001559 1.13470560687114 0.939958614345316 -0.644704024659049 -0.664694111705538 1.37512961183163 1.33429409135900 -0.630820022549657 -0.558451902614186 0.767728563333358 0.799402141670207 1.30426210140579 1.47364176159759 1.35485212344123 1.62334110226258 -0.43603751951927 -0.531214557550044 -0.661154721636926 -0.267720031125981 -0.552392090472583 -0.346460297138061 -0.95978188588237 0.764307046966223 0.909078693257677 NA NA -0.998033558434819 -1.45040606766568 -1.04338303768912 -1.28075897093797 1.68792044459843 1.68327526259222 1.42562253236844 1.44472900529379
MMP0359 -2.03164374017776 1.53207974743403 -2.05395577974833 0.357389460717907 0.434519802975808 1.05202029229086 -0.866802567399414 -0.101222430365153 -0.284577835419854 -0.612410802257474 0.574377090162806 0.51248702398422 1.12738538817550 1.44623712193930 0.553973635297763 0.371850080488945 0.300866047546288 -0.0332139975109133 0.144806820923749 0.0332139975109135 -0.91548020709403 -2.70189661527447 -0.480034855299444 -0.552467467436419 0.270888111886483 -0.00719399617493151 -0.417319098076001 -0.59458378270802 0.382337337448208 0.315943245421481 -0.864468965390614 -0.781895790757618 0.7164891906007 0.728171915595662 -0.0765768160536233 -0.0318152312508963 -0.0442098864631265 0.0176002246183628 -0.159276131962338 -0.275512590596057 -0.0241949743402138 0.0598402157584304 -0.0393150001141009 0.32225115599901 0.346688828130122 0.083591344381375 0.0906680360703019 0.00719399617493151 0.106695883746380 -1.6012969624829 -1.32885268196042 -1.29472521476235 -1.49862929265348 0.757856235043179 1.00094575138219 0.96195240853951 1.05904856636635
MMP0541 -1.25444090808286 -0.219598931952908 -0.427195291259301 -0.761339050176575 0.123389914136844 0.329196731853544 -0.780765026138795 -0.487648605001082 -0.123389914136844 -0.252135317456954 0.463488462365588 0.610855633595833 0.0379165586054999 0.288549814129477 1.05914806508954 1.41890858853093 0.437501325165879 -0.0709873606988238 0.0958308769503564 0.125206377924391 -2.06563743665521 -2.00762803220719 -1.41832947560237 -1.90045559498933 1.78817107928856 2.17579050568121 -0.686357865662457 -0.548001754879024 0.541604716125273 1.35886325816096 -0.784289348191525 -0.83588532209118 -0.0184947694011570 0.0171518980724252 1.52833423253653 2.03495357238959 1.87153829904855 2.25299587621430 -1.14493391583134 -1.26346244905527 -1.01603851441350 -0.203758600420395 -0.241309817017248 0.148617113169869 0.136271460004508 0.632873384382796 0.634978252778409 0.660542105579224 1.25242794883580 0.316559800590981 0.557911133890803 0.717510480405397 0.510211272714929 -0.0171518980724252 0.0731592886173586 0.402960507156412 0.0525684617994189
MMP0594 0.670076389883288 -1.40355739144514 0.826837261458796 -0.107796448246733 1.61340561895785 1.80029433668886 -1.39051050272670 -0.243691809188035 0.107796448246733 -0.354637833562703 0.465401972065175 0.354637833562703 0.487312498696722 0.442821067145761 0.708390708704059 0.764770755946148 -0.0839761265954683 0.937913179058009 0.707402563669347 0.557632297521099 -0.0177197331348237 -2.29878868381246 -0.602965422942944 -0.638255249970472 0.661777917324435 0.760366122914812 -0.651399499349869 -0.614199304636739 0.744845183250851 0.676267856354451 -0.600992872120836 -0.545895822104214 0.391195656151363 0.540006518120511 1.33751578328872 1.30212222825545 1.24335022694956 1.23145086641353 -1.07604154476155 -1.43154696956345 -1.12082763359814 -1.07765388172631 -1.69311856265784 -0.832985986327187 -1.21843268733035 1.19333820252897 1.21968647137072 1.23234920492355 1.39913331531932 -1.40798655417817 -1.59511882091603 -1.24454242426154 -1.54827461382995 1.02902122491843 1.06599573155110 1.38839252114071 1.43124412350806
MMP0866 -0.110395894433235 -1.24975023167615 1.97049016432887 -0.137233679900280 0.137233679900280 0.277266300283626 -1.67054749973461 -0.397112708255388 -0.278317118599360 -1.13419335295852 1.24339078409072 1.27872451099985 0.653354908035465 0.79722374328765 0.933856020017566 0.909199174918134 0.230205313536109 -0.0484879304649808 0.0157798002337116 0.109859368715714 -1.47765844530304 -2.48097409813764 -0.0466821555416826 -0.059559128983704 0.122471450545311 0.0466821555416827 0.556228973410388 0.48018904676964 -0.242345469292884 -0.148277170006115 0.453259835523792 0.404636928617242 -0.50377166440225 -0.484653035079675 1.02437064490216 1.07647901959760 0.939582038174529 1.14239707664555 -0.636085661906915 -0.556702892705667 -0.438962999252871 -0.340992389487518 -0.490785479574626 -0.232086717642387 -0.336142716254035 0.434963177974462 0.467241292181613 0.467431318690523 0.490839052514661 -1.34504307864181 -0.510765900539552 -1.23849377456830 -0.472405756743813 0.322604683980885 0.893085028867082 0.382687879656632 0.936103550492305
MMP1114 -0.395885230103803 -0.120484413483726 0.648377832231768 -1.32563915365601 -0.52801676660624 -0.736220035216725 0.39657333907264 0.219883629646765 0.308146886966663 -1.47182537978117 0.712813358913417 0.662733773653483 0.668646351783468 0.675386126022644 1.03665951885963 0.846989280151776 0.401689894955329 -0.0568766521810112 0.155762077057985 0.103537481508302 -2.66745186893312 -0.894480617510082 -0.920844922851322 -0.774233515218746 0.741443958325213 0.57567635684989 -0.134264227308408 -0.645227922739688 0.622645793505465 0.544730944980972 -0.627777626339565 -0.602881526610583 0.472031552240023 0.581203699285668 0.123062857030662 0.145199245241034 0.197979625502978 0.0247527170516498 -0.60110910756083 -0.826991323854044 -1.18784682401238 -0.149955983717593 -0.118444725905611 -0.620421881588776 NA 0.092893555158787 -0.082885873322922 -0.148802274383951 -0.103133703967387 -0.291770162043512 -0.781921184219644 -0.931967271207171 -0.555372364172706 0.370873063365652 -0.0788521084499778 0.149474359594971 -0.175705501432474
MMP1117 -0.936551393252806 0.60337580193026 0.460300063719494 -0.135722588854711 0.135722588854711 0.396996366251759 -1.20441991747128 -0.208445527117647 -1.28027412101267 -0.548139267023967 0.701791887808924 0.510693018500442 1.03483067939992 0.713563234324307 0.565633060142013 0.515764630464327 0.570635303290831 0.0563699865537228 -0.0563699865537227 -0.179434897068788 -2.01065119476267 -1.95756641556591 -1.92790158242759 -1.72155109391144 2.32224497046661 2.00740025610943 -0.512119899778379 -0.884527064021936 1.63901173038527 1.23877369788976 -0.813817012379678 -0.539180519000793 0.559190922768886 0.444863979906129 -0.517654590752015 -0.941860566546556 0.377371347597644 -1.64492035111732 0.141297733608887 0.299852797954902 -0.276467368308206 -0.173006941066080 -0.781788196345667 -0.389711373022902 1.60552380148405 0.151658120043920 NA -0.357499680685380 NA -0.728845450677396 -1.9312940314335 -0.79022102001135 -1.11894363515496 -0.418111147803866 -0.926878630132208 -0.230291363512437 NA
MMP1202 -0.266537528562303 -0.72746482711891 0.508656839292776 1.27924193144085 1.12737808615329 0.785008868380617 -1.72694301651621 -0.206220575853623 -0.159069855563592 -0.602385167276367 -1.34896605095988 0.293670206788623 0.61211166420357 1.15199413004267 1.54853704982579 0.705654200033303 0.833010907334127 0.504756730990577 0.098902293552213 -0.301778793146496 -1.83978553657076 -1.55880158463268 -1.04490344809476 -0.628048651083953 0.934969376639942 1.28121048454089 -0.340799810728136 -1.04907366248397 0.871536799738577 -0.0674713080274153 -0.684438324516272 -0.404749169359960 -0.893945381583492 -0.614707292718748 2.26845783065887 NA 0.675036052233406 NA 0.613122070956146 NA NA 0.671629926903303 NA 0.0232076723942156 NA -0.109761018381293 NA 0.334434782078857 NA -1.25108540791903 NA -0.454061659139358 NA -0.486189307781715 NA 1.15092682634083 NA
MMP1210 0.455889791158889 -0.77830849767195 1.14169586363911 -1.24195017191529 1.11027567334558 1.01555315524301 -1.28845464233410 -0.0209280894606722 -0.057914490244413 -0.340407525265985 0.340407525265985 0.364359713274841 0.522597390816642 0.564767732902825 0.943860413517743 0.841902333251993 1.2110907680254 0.268963400364370 -0.110541230923950 0.0263110706755357 -1.61855633910752 -1.50751146392642 -0.429486908814108 -0.445247014947914 0.391038893890657 0.376106404019362 -0.51108718208892 -0.520344144601343 0.526198991999364 0.454967447350395 -0.588870990489022 -0.562675491961418 0.533337187165509 0.556929511681322 1.29685037080059 1.40253880250467 1.27845795904806 1.40381516406164 -1.25033772237974 -1.29241345940046 -1.38773748008192 -1.10153774032807 -1.38943309916913 -1.18394146838806 -1.65287768069884 1.00611386253600 1.03001624059337 0.895054062419027 0.424856212504013 -1.37187768848730 -1.57583064788677 -1.37733936591030 -1.65127672422640 1.32621716239164 1.40069972340026 1.29832627942917 1.34680370925334
MMP1211 0.723456409717216 -1.28682494055913 1.44281137470267 -0.929856077973387 0.666852402566066 0.688025396926893 -1.62524968613178 -0.270868871612895 -0.528900699520346 -0.395222262603504 0.299364662443458 0.323359094484657 0.56632059473836 0.627668346298338 0.536783221248347 0.602801345974927 0.71892290709584 0.207493743440493 -0.0528725768729011 0.0528725768729011 -1.85990918496644 -1.48554251303118 -0.519767450344032 -0.471500060886722 0.359679324623787 0.329675606405452 -0.489409619799465 -0.586123935185122 0.421930389936688 0.405851720808964 -0.475817457491097 -0.444443696816155 0.273487760534655 0.380090164852395 1.18227304499746 1.18573016483657 1.19880498384451 1.21228265129454 -1.19730801378326 -1.27240450457282 -1.28046625427979 -1.09248476729220 -1.30211296129395 -1.10960101088810 -1.36716074230499 1.01255044401461 1.07719730515717 1.04639819575281 1.14777933656866 -1.12975016739654 -1.23295854556611 -1.15465556462299 -1.18692738712650 1.18820639154727 1.19383101153620 1.12434235278326 1.15918587388019
MMP1212 0.922086573132167 -1.54342867160998 1.55147641703819 -1.03852122203827 0.330423106168180 0.43944212105001 -2.12406288035383 -0.565871715545251 -0.33042310616818 -0.397061668141172 0.387797468624086 0.300448240044889 0.481478995359399 0.602074845941323 0.690425504691703 0.656464077217788 0.994870931540582 0.339521777582095 -0.0909114382138645 0.0909114382138645 -0.736945617652553 -1.82363235386523 -0.610950658805897 -0.540088870897474 0.54959883089293 0.453633407869553 -0.587924349430033 -0.524082530524173 0.563884630413172 0.52096954024386 -0.571075231810699 -0.54878703684201 0.261058060559659 0.302937073134773 1.19494333640467 1.21233241559014 1.19726685156805 1.15920045516499 -1.20745467864079 -1.28294264790394 -1.18288704766450 -1.11191281294447 -1.29141175099378 -0.96683659801484 -1.12104929353630 1.07864368345313 1.14547651605523 0.94581749599685 1.12537398843953 -1.22339836373314 -1.22963837965089 -1.13994332666140 -1.26555388396162 1.15159103916111 1.13786937008354 1.14983671521892 1.10025868440213
MMP1213 0.470957178985535 -1.23171778521200 1.42024375155139 -1.01447662572596 0.650704315924974 0.611231460506076 -1.38335717402527 -0.504804623167212 -0.492033156752107 -0.394967494897682 0.525401423464764 0.56740351535161 0.339674800010395 0.637288740798979 0.601304578780633 0.801098284074455 1.11166679536877 0.392427543532653 -0.0660545740977322 0.0660545740977322 -0.276551733473384 -1.77981734340089 -0.575846421732835 -0.558409419244951 0.289696089276402 0.245172891171595 -0.661208677878263 -0.638565917412095 0.133485883282390 0.162741008529641 -0.524602961989625 -0.568995246573899 0.0718912909154386 0.0894456004878727 1.09600669700205 0.9609137678271 1.06406997913776 0.877456597396937 -1.38341480762318 -1.47944612863284 -1.53374876688153 -1.27767661227681 -1.31982078635460 -1.18921760475609 -1.18991794533141 0.765584592521708 1.08341312055875 0.828626644324692 0.989992132987833 -1.22863622044660 -1.43429160453425 -1.20542216184977 -1.30016318199409 1.12918793998193 0.975591878311804 1.06897947811324 1.02538401219169
MMP1344 0.179854536892627 -0.334025142167508 -0.368472401417482 -0.982700285980553 0.337276773927578 0.658477200850572 -1.96308225971329 -0.77286802436692 -0.337276773927578 0.0414632400061562 -0.163578646184686 -0.102197808801413 0.656658145158865 0.472696910174618 0.0187384455012147 0.0656324822881582 0.0270135042819705 0.136318508583547 -0.0270135042819705 -0.0818223798294706 -2.36870512004178 -1.65962995265194 -1.62045883814120 -1.52561789261467 1.74854442001927 1.32920900512390 -0.955746254045294 -0.649327451531898 0.579522378477609 0.484212320296584 -0.893807791284074 -0.695168371905896 0.63320498782207 0.579542025154501 0.69204955659891 0.519599025191708 0.367533665184613 0.145581572521016 -0.722995480294175 -1.02655769274464 -0.523172643609106 -0.726100232329731 -1.04034202547021 -0.366911922294145 -0.566613739860416 1.56988307966344 1.52543619117804 1.57334208572684 1.58705078701673 -0.157822341746655 -0.338107872329758 -0.0280541883187477 -0.381442718470267 0.5028521794307 0.115914539057915 1.37422380938351 -2.20323070530032
MMP1722 -0.528545247406569 -0.56919293871014 -0.0291806226953836 -0.582926745378051 0.431148022605556 -0.186143999919501 0.186143999919501 -1.13423051025681 -1.31817242273673 -0.568041418068122 0.265449119252451 -0.0483778942486466 1.10145115441584 0.528541898748015 1.13927892275792 0.89278758307618 0.033132901470472 -0.0156162553065317 0.0792931199779626 0.131016801575258 -2.82340243428304 -0.181804058692091 -0.80779058799013 -0.610679543603473 1.58184858961977 1.16285925307063 -0.503124376630101 -0.246771011777177 0.117820313313474 0.091280466422232 0.159255396071424 -0.140687160684352 0.336395373040094 0.0635955524263286 0.920475128173905 0.48897696440609 1.07099294337772 0.156188679287264 -1.00973934579713 -1.44529430143370 -1.97773220370275 -0.845800687024509 -0.602430831732875 -0.840213364668203 -0.253185436223005 0.313006411655149 0.870071808943258 -0.144694032896960 0.376531807769115 -0.39220038983103 -1.33192951595612 -1.28971041237748 -1.40619474218104 1.49651278271252 0.87866866442634 1.13919961266207 0.790047772232208
[+] Show/hide bicluster #147 motif PSSM #1. bicluster 147 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 0.5 0.5
2 0 1 0 0
3 0 1 0 0
4 0 1 0 0
5 1 0 0 0
6 0 1 0 0 [+] Show/hide bicluster #147 motif PSSM #2. bicluster 147 motif PSSM #2 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 1 0 0
2 1 0 0 0
3 0 0 1 0
4 0 0.5 0.5 0
5 1 0 0 0
6 0.5 0 0 0.5
7 0 1 0 0
8 0 0 1 0 |