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bicluster 145
Methanococcus maripaludis S2
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bicluster 145 genes
Methanococcus maripaludis S2
16
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bicluster 145 short names
Methanococcus maripaludis S2
16
short_name
[+] Show/hide bicluster #145 rows (long gene names).
bicluster 145 long names
Methanococcus maripaludis S2
16
long_name
[+] Show/hide bicluster #145 rows (NCBI RefSeq gene IDs).
bicluster 145 NCBI RefSeq IDs
Methanococcus maripaludis S2
32
[+] Show/hide bicluster #145 gene upstream sequences.
bicluster 145 upstream sequences
Methanococcus maripaludis S2
16
upstream
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bicluster 145 arrays
Methanococcus maripaludis S2
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[+] Show/hide bicluster #145 ratios.
bicluster 145 ratios
Methanococcus maripaludis S2
16x56
GENES H_vs_Leu_3000070033A.4 H_vs_Leu_3000070239A.3 H_vs_Leu_3000070240B.3 H_vs_Leu_3000070260A.1 H_vs_Leu_3000070261A.1 H_vs_PO4_3000070034B.4 H_vs_PO4_3000070247B.3 H_vs_PO4_3000070248A.3 H_vs_PO4_3000070248B.3 H_vs_PO4_3000070249A.2 H_vs_PO4_3000070249B.2 H_vs_PO4_3000070253A.1 S2_vs_S40_BR2_3000070262A S2_vs_S40_BR2_3000070262B S2_vs_S40_BR3_3000070265A S2_vs_S40_BR3_3000070265B S2_vs_S40_BR3_3000070266A S2_vs_S40_BR3_3000070266B leu_vs_PO4_BR1_3000070030A leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR2_3000070243A leu_vs_PO4_BR2_3000070243B leu_vs_PO4_BR3_3000070251A leu_vs_PO4_BR3_3000070251B leu_vs_PO4_BR3_3000070252A mma_0070m_0.2 mma_0334m_0.402 mma_0492m_0.598 mma_0849m_1.4 mma_0912m_1.56 rapid_H_vs_slow_H_3000070036A.3 rapid_H_vs_slow_H_3000070037A.3 rapid_H_vs_slow_H_3000070038A.2 rapid_H_vs_slow_H_3000070038B.2 rapid_H_vs_slow_H_3000070040A.2 rapid_H_vs_slow_H_3000070040B.2 rapid_H_vs_slow_H_3000070041A.1 rapid_H_vs_slow_H_3000070041B.1 rapid_H_vs_slow_H_3000070042A.1 rapid_H_vs_slow_H_3000070042B.1 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069787A.2 rapid_PO4_vs_slow_PO4_3000069787Alow.2 rapid_PO4_vs_slow_PO4_3000069787B.2 rapid_PO4_vs_slow_PO4_3000069787Blow.2 rapid_PO4_vs_slow_PO4_3000069789Alow.3 rapid_PO4_vs_slow_PO4_3000069789Blow.3 rapid_PO4_vs_slow_PO4_3000069790B.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023Blow.1 rapid_PO4_vs_slow_PO4_3000070024Alow.1 rapid_PO4_vs_slow_PO4_3000070024B.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0015 -1.35934838569485 1.99294286914673 -2.18423233138173 0.46308687583053 -1.71006900523013 0.0681028980603204 0.481009566528943 -0.734401295193974 -1.19388417682004 -1.41500081033262 -0.215134239015714 0.0975984813682214 -0.317256670844517 -0.368146681516677 -0.000786010185692667 0.000786010185692854 -0.880767579997469 -0.451938573824328 -0.541186363034061 -0.56051455019743 1.88736638300344 -0.961311481273325 -0.832116273443344 -0.5333063685327 -0.514632224390891 0.463153359819460 1.70352100938988 -1.16098919222700 0.251327322491302 -0.411269458736126 1.68286001076024 -0.230422123522288 -0.622186562253477 -0.0935524020712491 -0.0617418415420007 0.236160342415618 0.394489127937745 -0.0858796594909701 -0.554922926534872 -0.163797100695446 0.518708935494791 0.434428341818941 0.552787065480419 0.0642161141227962 -0.100167777317873 0.296794809408839 -0.346619553671021 1.78991988116271 0.741607290105647 0.261031094071111 NA 0.24278338428382 0.406678207326776 1.21865792039136 0 1.43650084501677
MMP0310 0.122523811086002 -0.0472302947036286 -0.670053014145978 0.610034929184695 -1.24860630930084 3.83740626928305 0.441401441367131 -1.24060741971406 -0.704965187440745 -0.742154231786844 -0.258977933410073 0.516653332713214 0.165599464480892 -0.115085211758257 -0.548192380155936 -0.138521033192166 -0.589569713315322 -0.64098308513647 -0.355288936539917 -0.464416028956251 1.78318974067874 -1.07607863288550 -0.735759017954644 -0.597039146632308 -0.790411747815394 0.355288936539917 0.31426788684423 -0.300757397635817 -0.0226996087067825 0.443213585318645 0.0226996087067825 0.090841415013693 -0.714250304525974 0.594583041328975 0.51555690436143 0.587827849087127 0.69234817851201 -0.560012188360892 -0.825549661636683 0.449304765487702 0.423344891254012 -0.119484189257721 NA -0.349362438206787 -1.36926616091359 0.0521692563539637 NA 3.40505430384184 NA 0 NA -0.764656815052923 NA 0.8330051204989 -0.768342218344354 1.5732247004647
MMP0382 -1.62591027898453 2.56228910470842 -2.33304257337086 -0.0969151410027862 -0.497644969361945 0.553467223578835 0.512493702684723 -0.483490304880632 -0.564177458847534 -0.380441204558104 -0.0706265066782046 1.04691563687123 -0.329379993766278 -0.314498042570418 -0.729224307910708 -0.548006893760777 -0.419765653903993 -0.0150619811095633 -0.648213089850068 -0.92786332659449 1.70152028939837 -1.41549321474106 -1.56802404814930 -0.367548133995298 -0.205272603334683 0.205272603334683 0.450210897924679 -0.260176501411009 -0.0125572431044878 0.0125572431044878 -1.24364585304325 0.536132721370741 -0.482210122827139 -0.373016577640919 -0.229523145115857 1.35638182650087 1.23454895191487 -0.641623343280015 -0.600236831710616 0.436922434076687 0.617440765587889 0.228783833711900 0.372578337386844 0.353956449854951 0.371348200711594 0.510262757589694 0.591434902522136 1.18429759408001 1.05061257331155 0.211204073305664 0.564075751263834 0.776971287999222 1.11018195615797 -0.0779600936393667 -0.652295649841407 0.240541201025407
MMP0640 -0.544123837103015 1.19989683120003 -1.56705554168475 1.16321505249304 -1.14334957763455 0.209799206917334 0.0780380344935609 -1.06694216172311 -1.28745460132935 -0.168671545684252 -0.0671059156543934 0.665041455528598 -0.398872388271651 -0.138878430138416 -0.901159160409368 -1.40230336603664 -1.53882977737360 -0.83222044726935 -0.376124173670104 -0.456451448375477 1.71441483424945 -1.00376193232348 -0.93654936553524 -0.681113868623849 -0.592669490273284 0.261824549195909 0.408726024000733 -0.264115597357287 -0.0715439236863664 0.0745544781534589 -1.89078392366863 -0.598400534495428 1.35823160917270 -0.765511484316988 -0.831824435958743 1.67588625052231 1.75667732052155 -0.570360389418241 -0.644632943637226 1.32051701033158 1.32718292399614 1.39604971438991 1.49004043245246 -0.499832287839303 -0.564406619031917 -0.55341976648598 -0.595132455617835 0.116023549007513 -0.108363862999682 1.04710159741112 1.25933832421821 -0.191075040079254 -0.311477972345843 1.55753278583994 0.558829033544023 1.38499353707515
MMP0937 -0.946996577006347 0.574842064264811 -0.267462630417775 1.37791961813602 -1.78558116627336 -0.198109875061742 0.101773268415113 -0.97038262431459 -0.734921707459627 0.87746901139485 0.359207184230836 0.20350416159705 0.589924915036712 0.513477925240535 1.06676711502935 0.613613240787421 -0.407829000194223 -0.337082007687751 -0.650515553485455 -0.477522393153274 1.52938888557156 -1.33008990882781 -1.06918439597848 -0.261342889417521 -0.614305545957918 0.436619086249267 -0.103191698989900 0.103191698989901 -0.360197439870408 0.197204621519783 1.00215550258925 -1.08052231009516 0.739762433543018 -0.205383921914832 -0.494187978568981 0.43058274480638 0.58765344255494 -0.557472385473098 -0.519147210061401 0.0409899791473442 0.005924228244311 0.387904371800770 0.628575090104724 -0.273560628675995 0.0590841014423706 -0.0531589352274453 -0.203566611154589 0.716030634487379 NA 0.305056340695671 0.73763694830049 0.365247443238777 1.32386880142350 1.19518316618231 -0.98385524266757 1.22775893529327
MMP1113 -0.766792856493661 0.463471864753068 -1.68710262743863 0.363452523679768 -1.03858300528236 0.889031184780729 0.00754092061180413 -0.203062725984818 0.315784467875365 -0.788805754792653 -0.809033162466108 0.243858376985773 -0.62340404617853 -0.137118848260731 -0.311549553135070 -0.336698602356049 -0.449797947998575 -0.37740535208059 -0.88305024698529 -0.845174988032918 1.54768028528463 -1.21265206942269 -1.00514874592612 -1.02626613801856 -1.19019115793935 0.941941693437813 1.15561760108520 -0.116828932859916 -0.150083061711578 0.362059821395964 -0.994913727295444 -0.872372234506065 1.40002531594246 -0.429409723193971 -0.641155830378186 1.60518475950218 1.63447986749927 -1.33465254557039 -0.83971253921844 0.885413364556115 0.960607930845104 0.357029261829846 0.598036687574077 -0.266204006354643 -0.125583707327811 -0.00754092061180408 -0.779470375209998 1.0618887388841 -0.498859285639634 0.859063605013441 1.09637069083874 -0.839836840548718 -0.120468622976807 1.77101872812395 -0.61940458427622 1.50196956639718
MMP1265 -0.629121727426096 -0.558285476275897 -0.83362816441586 0.242251323357873 -0.546050962561332 0.716251755647565 -0.345909929251633 -0.436320203218897 0.0332449303036875 -0.92874303137931 0.264247739061713 1.86409357594503 -0.217117414463823 -0.342587833253834 -1.16071031387695 0.441143538103742 -0.853404872266467 -0.563842368459997 -1.06440150653944 -1.26122782386254 1.93119479983046 -1.03136754747517 -0.392863468205539 -0.955918086638738 -0.436301373610797 0.179873627151759 0.339393322813841 -0.139638436295659 -0.0590308258392726 0.067661539686118 -2.09251385810670 -0.481196685672229 0.650039683409054 0.0213853665495052 -0.52387566469436 0.842561986453364 0.9927642155111 -0.590760431754104 -0.343479097484347 0.069944066493851 0.811692099733077 0.50243810181376 0.236804022040684 -0.065343728011672 -0.289326813084069 -0.316838495064652 -0.640327183210462 0.597965577932615 -0.666863507433605 0.130866819731575 0.876762878509425 0.0851087110902622 -0.408622222491234 2.03506263081926 -1.27722696128219 1.53942778238061
MMP1284 -2.65330254091608 0.976895228788248 -1.21757295149320 -0.145135918767303 -0.980935829812119 0.00104004749452893 2.18265135434927 -1.05029286817460 -0.95809479204473 -0.347120801073074 0.0942687089810411 0.212347424904437 -0.049030311944882 0.196525433047603 0.0274644050756539 0.215106526636643 -0.471657198959374 -0.306709378180494 -0.526367647758910 -1.17548397351618 2.20554213164418 -0.465090329956692 -0.923566795000139 -0.418004703135165 -0.480331095019171 0.462225659035584 0.373008648164226 0.196302859363364 0.110275041131365 -0.00315546051430111 -1.50714758775172 -0.736222657803426 -0.407303735322827 -0.271582710793652 -0.541594529051786 0.93842809540411 0.771426496579567 -0.99357035808149 -0.884108147143883 1.21470198869617 0.684769006631434 1.11034167335174 0.819563190788746 -0.981894827375243 -0.99483654162176 -0.334333021698965 -0.610196097990379 0.568589612943676 0.640555778011164 0.728531464767651 1.19988968386332 0.781486535668898 1.09529249665039 0.398330018710571 0.337646301734654 0.883524715676617
MMP1407 -0.886650581754616 1.0418747202142 -1.69764733377705 1.67391245320413 -1.71110052050526 0.207935187284848 -0.0241586177887626 -0.572929556091135 -0.570656230927406 -0.611642403251485 -0.571438306591832 0.342081405009081 -0.146425888841252 -0.183295492645101 -0.475752565015373 -0.260119508544107 -0.949865306767016 -0.773293360433146 -0.199564104165609 -0.246995601617795 1.61976167061927 -1.01672750147289 -0.880015007817515 -0.184969588215831 -0.116684879675779 0.116684879675779 0.294687148941368 -0.312962731609851 0.0390408823961509 -0.0174280194142926 -1.99219742897483 -0.432585769714945 0.57348992168075 -0.79232646929515 -0.769652881755092 1.32483269570809 1.36234737030158 -1.21893687061559 -1.50291732414672 1.68962908114670 1.70137379183801 1.05616819949818 1.11290422014258 -0.683157417413548 -0.796584817535923 -0.635408817973873 -0.668314080188384 0.508779264390448 0.494505069358355 0.573579521465214 0.705123005689702 -0.525141392843502 -0.625279067675969 1.35149212355373 0.278203791173567 1.35804394393157
MMP1408 -0.804236965071138 0.772062541707347 -1.33934392203543 1.30546406730468 -1.35514852271651 -0.0497550472303816 0.141037559673449 0.0319301574476665 -0.315106005412933 -0.0492258523178488 -0.00735228643465342 0.876611484473043 -0.0234026101900937 0.191653955459327 -0.524332579751567 -0.463984227497562 -0.603428294837126 -0.639022785919026 -0.75983062162115 -0.703638418709049 1.18877806743050 -1.39668325652312 -1.24542082340649 -0.252686342630696 -0.285526308651241 0.252686342630696 0.238324698973056 -0.323060114618149 -0.0465960219764934 0.0907734482569293 -1.79877558085880 -0.76806383262362 0.779953992880266 -1.27447485457193 -1.23631400200915 1.25791240193634 1.52134448795460 -1.39458500181394 -1.32370748974938 1.29858163687327 1.27365220245421 1.05475316778102 1.36200345278599 -0.685899268827116 -0.799016287828265 -0.58157648064603 -0.970419837227045 0.484278684440713 -0.487201237585486 0.821251529820402 1.00249454603568 -0.792641279893111 -0.914385063607511 1.54717852293266 0.795195663626953 1.57784543871317
MMP1421 -1.71768201147484 2.56296704676825 -1.99054774199109 1.68360143718394 -1.31698493486294 0.419100054185360 -0.592940623483007 -0.328180652883325 -0.146220672135572 0.197305049953299 0.163933353744521 0.210370250199582 -0.0185325438391642 0.296046102625147 -0.336551333945504 0.0185325438391642 -0.414538255043167 -0.0501532421525804 -0.814968398424723 -0.953532914863984 1.20163485115521 -1.01316673767019 -1.00776583161913 -0.466723433271212 -0.398568197180621 0.398568197180621 0.385252114439312 -0.696727710061536 -0.271688566984348 0.134764349857717 0.262480711785297 -0.877716374156614 0.96777517191577 -0.663567876518066 -0.566876969378382 1.17141506670727 1.21284923507554 -0.977465512737435 -0.949352644356782 0.724960764010261 0.908443387523995 2.10210957728531 0.593725360240199 -0.113741679971414 -0.288579914262797 -0.134001765586232 -0.452985092123136 -0.0135811110157323 0.057110841826242 0.315116965268593 0.27128373892815 -0.324916426438197 -0.234090775849841 0.713689867857004 0.95409933353194 0.849906053714547
MMP1434 -0.28764807878089 1.95101892990102 -1.13039343407318 2.53270715603135 -0.388026557235197 -0.46671045779489 2.01009013644257 -0.0340850256936157 0.565302293516992 -0.447039337424943 1.38526197133258 1.5736873341255 -0.496077410083489 -0.589491343398479 -0.122915602582293 -0.0453409834898068 0.0453409834898069 -0.36683002833313 -0.675541081078271 -0.554312283036269 0.61216807101576 -1.21748259143484 -1.02004070687038 -0.612889814266355 -0.490576347451498 0.66311569484178 0.0355603198510696 -0.607027436020579 -0.167420966963494 0.118871548244668 -2.8024513147301 -0.860662258928396 0.653304152369115 0.289306348620735 -0.091975848578194 0.408809069687324 0.278270920969626 -0.590974427109398 -0.99584867529448 0.66544867140808 1.02732647832468 0.14520746663537 0.604299904456506 -1.10503898854461 -1.09014242116443 -1.5314551851836 -2.14727078044030 0.0340850256936157 -0.411238536026373 -0.302603962699784 -0.081916726101586 -1.53563008863142 -1.68126333521592 0.774943169464343 0.225596603797538 0.751548762957186
MMP1496 -0.975381064616118 0.181594602336508 -0.741711399327448 1.31595951661283 -2.18313947519737 0.228090812568709 0.281832365363648 -1.45988239560877 -1.77154557238079 -0.598051089958392 -0.233942255409360 0.506841369404824 0.663433527685747 0.608541657875304 -0.250621527931833 0.465353059856468 -0.91531212951791 -0.878034156578408 0.181542849577533 -0.271010595589014 1.85479011114993 -1.00341126976871 -1.05169294831929 -0.341106404205673 -0.248406767851524 0.0256660822348409 0.391351095515281 -0.380573645323018 -0.0549001692124656 -0.0459864886023236 2.67681880395569 -0.388637107411167 0.449206959120518 0.568401902200468 0.0801508571639573 0.54493030486877 0.841501710216528 -0.665266741867249 -0.539079485637268 0.723405307460331 0.936308388232229 1.09752446947668 1.85001234537446 -0.577098151916926 -0.224214795040951 -0.163243952589786 0.197277097586547 0.69945166779916 0.826335565857438 0.441118532190404 0.472350651194079 0.257579908793733 0.704530536853813 1.47929713127369 -0.0855544178779826 1.60318109716549
MMP1536 0.0742672273200109 0.162752679380207 0.0261939853838327 0.709455285249373 -0.107947496064122 -1.60545163122609 0.339936529281656 0.338130691816197 0.164720484934936 -0.706177962465299 0.0905977296219335 0.0356374938793457 -0.0736139316286008 0.460932721605561 -0.628572735414532 -0.273182412476089 -0.299086404901078 -0.732144758782044 -0.232286078724035 -0.678505745072242 1.69569429474366 -1.51312280033658 -1.07150065803387 -1.0123997475754 -0.907250954371292 -0.0702426603477214 0.201131734880978 -0.0324406024001577 -0.099530529066016 -1.83144456188465 0.0572887233875126 -0.908481738690497 -0.547131476067137 -0.344312065847788 -0.191069449776862 0.143256018944614 -0.0261939853838327 -0.167879004256220 -0.869556916642219 0.353918204593669 -0.155518610785621 NA NA -0.309090519134223 NA -0.738716979134238 NA 4.69499174915171 2.67652508098365 -0.434698813301257 NA 0.276190008247966 0.912631955340079 2.38323669117966 -0.247945807658066 NA
MMP1544 -1.69912594293271 1.98367924718761 -1.28932408920580 1.20436127003835 -0.862098616721504 1.18070983174626 -0.148421121752840 -0.759818651594367 -0.555232053144803 -0.0200643380442650 0.142614785773317 0.235801717038289 -0.403575893777679 -0.278931593958597 -0.489338081145113 -0.0488802134206617 0.104372933177932 0.0488802134206617 -0.201259028384654 -0.273740611918515 1.51140600363044 -0.995695861430553 -1.01010259994838 -0.157607305993684 -0.170969311600388 0.157607305993684 0.261444307262672 -0.302595704802413 -0.0592996262300212 0.0616692994029558 -1.28294683551744 -1.01581547026646 1.3960643111953 -1.32496062306799 -1.34145053821637 2.21528667257570 2.18715070262810 -1.09441706332817 -0.990716377254645 1.3469665237997 1.5726659192155 1.72660828531691 0.878945292775804 -0.0243983669421235 -0.169800507879661 0.118800504943720 -0.0968117419952016 0.460970324335321 0.668233099940396 -0.188140465281646 -0.277473851126307 -0.111846988603707 0.0218549052147832 0.794699963092181 1.00857914690662 0.934369374764992
MMP1588 -1.00832663082916 -0.0129985433701128 -0.484374020798652 0.432365182940532 -0.745717258887678 1.06959787587014 0.626883309743677 -0.783837882863367 -1.03364523413917 0.215562110068757 0.338209052015522 1.15459107035584 -0.370040407305454 0.00789246987020285 0.357527398358634 -0.0078924698702029 -0.913885258847015 -0.639765484233645 -0.80255878641153 -0.735340682528251 1.62371721944967 -1.61121147626860 -0.724088632494988 0.828482115282324 -1.13127901966545 -0.090646099124359 0.360491410886504 -0.636396846847886 -0.336967500700228 0.304934942148702 0.750012327960328 -1.1127826343824 1.20150293457231 -1.17777691951421 -1.06898858099981 1.62559230549885 1.60249919349648 -2.15112791532598 -2.09599193278738 0.623594317896801 1.21318704969509 0.124309054625349 0.549145387887944 0.339958110856498 0.334765485601812 0.352580093376755 0.0132448231151437 1.64487753041546 -0.188142817051673 0.633799064381004 0.969552320685462 -0.270762400264286 -0.377918344894304 0.657082580353197 -1.16723052607527 0.522275708378511
[+] Show/hide bicluster #145 motif PSSM #1. bicluster 145 motif PSSM #1 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0 0.666667 0.333333 0
4 0 1 0 0
5 0 0.666667 0.333333 0
6 0 0.333333 0.166667 0.5
7 0.5 0.166667 0 0.333333
8 0 0.166667 0 0.833333
9 0 0 0 1
10 0.166667 0.833333 0 0
11 0.833333 0 0.166667 0 [+] Show/hide bicluster #145 motif PSSM #2. bicluster 145 motif PSSM #2 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0 1 0 0
2 0 0 0 1
3 1 0 0 0
4 0 1 0 0
5 0 0 1 0
6 0 1 0 0
7 0 0 1 0 |