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[+] Show/hide bicluster #140 rows and columns.
bicluster 140
Methanococcus maripaludis S2
14x56
[+] Show/hide bicluster #140 rows (genes).
bicluster 140 genes
Methanococcus maripaludis S2
14
[+] Show/hide bicluster #140 rows (short gene names).
bicluster 140 short names
Methanococcus maripaludis S2
14
short_name
[+] Show/hide bicluster #140 rows (long gene names).
bicluster 140 long names
Methanococcus maripaludis S2
14
long_name
[+] Show/hide bicluster #140 rows (NCBI RefSeq gene IDs).
bicluster 140 NCBI RefSeq IDs
Methanococcus maripaludis S2
28
[+] Show/hide bicluster #140 gene upstream sequences.
bicluster 140 upstream sequences
Methanococcus maripaludis S2
14
upstream
[+] Show/hide bicluster #140 columns (arrays; conditions).
bicluster 140 arrays
Methanococcus maripaludis S2
56
[+] Show/hide bicluster #140 ratios.
bicluster 140 ratios
Methanococcus maripaludis S2
14x56
GENES H_vs_Leu_3000070239B.3 H_vs_Leu_3000070240A.3 H_vs_Leu_3000070240B.3 H_vs_Leu_3000070258B.2 H_vs_Leu_3000070259A.2 H_vs_PO4_3000070249A.2 H_vs_PO4_3000070249B.2 S2_vs_S40_BR1_3000069792A S2_vs_S40_BR1_3000069792B S2_vs_S40_BR1_3000069793A S2_vs_S40_BR2_3000070262A S2_vs_S40_BR2_3000070262B S2_vs_S40_BR2_3000070263A S2_vs_S40_BR2_3000070263B S2_vs_S40_BR3_3000070266A S2_vs_S40_BR3_3000070266B S2_vs_S40_BR4_3000070272A S2_vs_S40_BR4_3000070272B S2_vs_S40_BR4_3000070273A S2_vs_S40_BR4_3000070273B leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR2_3000070243A leu_vs_PO4_BR2_3000070243B leu_vs_PO4_BR2_3000070244A leu_vs_PO4_BR2_3000070244B leu_vs_PO4_BR3_3000070251A leu_vs_PO4_BR3_3000070251B leu_vs_PO4_BR3_3000070252A leu_vs_PO4_BR3_3000070252B mma_0334m_0.402 mma_0649m_0.885 mma_0783m_1.23 mma_0849m_1.4 mma_0912m_1.56 rapid_H_vs_slow_H_3000070036A.3 rapid_H_vs_slow_H_3000070041B.1 rapid_H_vs_slow_H_3000070042A.1 rapid_H_vs_slow_H_3000070042B.1 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069787B.2 rapid_PO4_vs_slow_PO4_3000069787Blow.2 rapid_PO4_vs_slow_PO4_3000069789A.3 rapid_PO4_vs_slow_PO4_3000069789Alow.3 rapid_PO4_vs_slow_PO4_3000069789B.3 rapid_PO4_vs_slow_PO4_3000069789Blow.3 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Alow.3 rapid_PO4_vs_slow_PO4_3000069790B.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023B.1 rapid_PO4_vs_slow_PO4_3000070024A.1 rapid_PO4_vs_slow_PO4_3000070024Alow.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0295 0.911954057793025 0.503761994387197 0.168359438784352 -0.678556545037998 1.59285846774143 0.410390672969206 -0.181545038960042 -1.39514391552722 -1.76471816052009 -2.18745452975665 -0.639560178974233 -1.08546085291320 0.290033683770965 0.231826613662173 0.798865205330977 0.920052366225833 0.537236319249146 0.236655831350646 0.642768008085185 0.0173391819992087 0.747230234878946 -2.24192825466088 0.240630870776101 0.237476312582285 -0.67297533776696 -0.782382605428768 0.922039751111958 0.544418359373489 0.240791827660958 -0.332315069323467 0.35565839065001 -0.0815219591219293 0.0815219591219293 -0.236680396255843 -2.54109628767971 1.23638991893920 0.838170947446326 -0.681701545102757 -0.519909306429678 -1.66467830046555 -1.12066596064940 0.324329076547023 1.12366479424011 -0.260187815410721 -0.644744335055217 -1.14524493160307 -1.1108259866056 -0.271958877504822 -0.708404600908728 -1.03793582172385 -2.27193319005683 0.303516406090115 -0.126944362225886 -0.703063587942918 -1.52099066456875 -1.86351029994445
MMP0712 -0.452826027924484 0.110824435331377 -0.00737684681246852 0.07621214197197 0.00155942440492718 0.652502371344915 0.52934750140098 -1.54122882626112 -1.48203056000114 1.30348700360873 -0.357146257633989 -0.457920168226481 0.52401089241022 0.405287866117991 -0.0165917740594998 0.19895145051389 -0.271679346360731 -0.539236255876239 1.11524069824313 1.62987080288504 1.11953033757235 -1.4498863896463 0.573030485429604 0.59363243452172 -0.640427330935221 -0.573030485429604 0.834739257004377 0.76516439608273 -0.999025228505667 -0.814006737958954 0.326120884153276 -0.174353949323843 -1.25730671816173 -1.62637630967876 0.881561161769502 -1.11159214660561 0.910056662246145 -0.81431578708578 -0.969236393045528 -0.99842244139601 -0.919979687950996 0.524822403454127 0.77397062498467 0.232976085599835 0.235294187995877 -0.00155942440492716 -0.0438932914741413 -0.534036264596884 -0.5730758467228 -0.711431482218771 -0.716643547087776 -1.91011647346973 -2.16756208039212 1.56112986479369 1.5956012416212 1.58159159746321
MMP0719 -1.09097761439169 0.772101608053349 0.698775811576824 -0.237286794821129 0.456772727006409 0.423015588072406 0.462263872751255 -1.70540895932188 -1.99816176893146 1.81952986134421 -0.184321356150627 -0.249394513958386 0.000304257144295959 0.00586558984268931 0.444561061414841 0.518341414738195 -0.000304257144295959 -0.50777412870561 0.849731135362683 0.415173852830195 1.46413654374970 -1.54166807568554 0.673781349971401 0.462010126849048 -0.462010126849048 -0.540919493947478 0.729878358735739 0.695460242652529 -0.508761737505219 -0.537056093102287 0.6893987098166 0.285521446222053 0.0963967191807416 -0.0963967191807416 -1.72115730645327 0.114615010493867 0.517598975529826 -0.393286097425118 -0.31751582080337 -1.49557408759345 -1.70592101886772 1.41260857641280 1.85579045491890 0.731398444844436 1.037566196068 0.701574589482044 1.24926405475015 -0.845060011870376 -1.09801015780554 -0.737170415183494 -1.61979171083923 1.27549952255134 1.10578411211246 -1.29452912141580 -1.62877759280785 -1.65496742022049
MMP0783 -0.936613456890171 1.12051254003711 1.28297213118343 -0.849870066938445 0.687672577717388 -0.0914335470656999 -0.513747724320974 -1.33600543046245 -1.05374405012689 2.20797289981014 -0.0548154780786732 0.0361198800673866 0.106286886900965 0.645137718370122 0.0192054920966069 -0.200248184980905 -0.78458130112352 -1.13639855128039 -0.095078669072093 -0.0192054920966068 0.7879418645668 -1.66691309660279 0.383009235032051 0.379542796029288 -0.379542796029288 -0.418645270472121 0.746436539363676 0.621608172134807 -0.451766599639689 -0.651474317517831 1.23436312723121 0.105905465988913 0.311654616835894 -0.105905465988913 -1.91275550248330 -0.265708830322854 -2.90390897898354 -0.360926427434085 -0.0687323950467575 -0.505751087352473 -0.55758359620346 0.556355758677308 2.17903577487496 0.216738812514006 -0.273244733716053 -0.296936159807702 NA 0.0399998331599972 -0.348110988931975 0.0590276659634256 NA 0.919348327275576 0.810525364590347 -0.314287440446743 -0.769358511930224 -0.572012431190525
MMP1135 -0.494640282832186 -0.191204136633071 0.0935779632787048 -0.544969680354302 0.08639877427106 0.155953695735416 -0.00757554165920583 -0.851296769348353 -1.71968747172292 1.30437548259133 -0.445967949245874 -0.603129622239474 0.612104808771299 0.0423077125862619 -0.0423077125862619 0.53247996108014 -0.446191978852887 0.0477828109388526 1.50012687917612 1.77267388935573 1.38810581181981 -0.932282206831466 0.905240281811766 0.956604286642344 -0.551671991183381 -0.640248916476985 0.30541591933181 0.260016563883451 -0.260016563883451 -0.311961211550804 0.651475731316804 -0.676424431049827 -0.527181758773008 0.259151808938511 0.105751020039523 -1.32899187529046 0.808816430009892 -0.719553349744485 -0.429194998042414 -0.126921001244436 -0.244156034866005 0.760040941656327 0.553254949094979 -0.0524995154922613 -0.0373031899418829 0.217999432305500 0.289252151511231 0.0366180362533028 -0.0373050157380914 0.112704014883687 0.106647379074770 0.651353499465367 0.943409588679909 -0.540946914409403 -0.626822383823923 -0.490251027447226
MMP1247 -0.889898601514491 1.36613060662798 1.13913904993421 0.390824515582198 0.238116399111496 1.23616144628843 0.876869055501301 -1.62286558080725 -1.79492782038003 0.132200605540669 -1.16092713784980 -1.33231171662811 0.805226401042563 0.912291569507403 0.881683228039286 0.797445158757986 0.0113583629089538 -0.0600423060814011 1.27038216638944 0.817558813392602 1.49855645071943 -1.54714148169139 0.910382146424063 0.967982192800145 -0.414857398473442 -0.536096040362285 0.629035768751783 0.598611219681335 -0.463559751781633 -0.623740066070942 0.76119515247025 0.00500032780256798 -0.0921010098607074 -0.00500032780256798 -1.60940718262206 0.456826524570313 0.794794425705039 -0.877956369992682 -0.876119185240623 -0.607972685738067 -0.861237605829325 0.323294959517315 0.00893222643871702 -0.0597244518513802 0.0422088239850931 -0.482434475915032 -0.616198792472239 0.440666561726304 0.683611220580878 -0.126172883769517 -0.0754147916081063 0.29021951408376 -0.00893222643871703 -0.0386511188431294 -0.608791558797747 -0.917016340191736
MMP1249 -1.57106056317739 1.18033210907289 1.13526584958954 0.0181680821923929 -0.0470544344141988 0.319133401685017 0.41800483090547 -1.83043191558642 -1.91617000092909 0.0160173388560788 -1.3482908801503 -1.32063711357929 0.564032644591957 0.580296760752853 0.756990726432403 0.955318512092153 -0.0160173388560788 -0.244073975515603 0.530365219555644 0.421436879696135 1.96952690767408 -1.18797761122671 1.01018347162164 1.11800975341208 -0.504409708963128 -0.383309638846341 0.276167193123240 0.450612598464245 -0.708448141704117 -0.646531889898071 0.740064718181521 0.0424333828736941 -0.141687717501694 -0.0424333828736941 -0.114835342401935 0.353590354410645 1.14435462255878 -1.20852937843561 -0.99804403799829 NA -1.08092598293233 0.491989590468481 0.768522438571082 -0.0518567434866992 0.0127879543732243 0.0255467837009390 0.089613172820337 0.0170124873072181 -0.0423742024586542 -0.0437942259612576 -0.165471929276962 0.80514095067233 0.776171084086851 -0.196485640723418 -0.600529531139234 -0.493060032942885
MMP1251 -0.323546141016553 -0.0306898465373405 0.283612650759638 0.231496263810570 0.37823394247193 0.465862397060469 0.889021747650878 -1.77655379565407 -1.83708804282202 1.66447626022838 -0.244304556575982 -0.339358415189269 0.413585985570059 0.568509430285117 0.825873998023725 0.736782375290265 -0.520598860597534 -0.54115656433952 0.153007530371516 -0.163889056852194 0.43717602482693 -1.37038903911372 0.689859350992878 1.05661562946722 -0.43717602482693 -0.58517870487839 0.496326033090707 0.606046402103715 -0.542618994152421 -0.450918935873032 1.08347046594131 0.175708537287132 -0.290751114273039 -0.175708537287132 1.56683272847093 0.774383025496784 1.68381639841867 -1.74121130537266 -1.77028443023591 -0.941544805589902 -1.00939398953742 0.317669898432804 0.235985534837117 -0.716306468076149 -0.700062098966812 -0.492430074061422 -0.435237436463055 0.505260458153841 0.630024870823544 0.531148850002777 0.384676013755432 1.47420772202956 1.87317515316403 -0.611561894857105 -1.23666094554581 -0.0302675242721776
MMP1258 0.99325292765752 -0.379579209281137 -0.789173531075714 -0.16798930270094 0.99213150583985 0.785627319895773 0.102471930899622 -1.70849788613366 -1.52494951337738 0.782981090189378 0.161905954316004 -1.18486934643935 -0.6573448391884 -0.251546245410367 0.225691879202927 -0.694330276220005 0.421062045473717 -0.161905954316004 2.16914604243166 1.01563288770683 1.13803545615400 -1.26670738104304 0.597110338169446 0.586507470346876 -0.355983659694675 -0.365700805652564 0.674975029241217 0.355983659694675 -0.888591011525076 -0.757930372739503 0.950572712864822 0.644295080301504 0.112209127613339 -0.112209127613339 -0.930493997669042 1.28116805032356 1.64142460634352 -1.21188313213255 -1.71457379585622 -1.33612030050830 -1.82332014403823 0.481220602418363 0.244414351298171 0.220283702380732 0.311696031193124 -0.362319788878221 0.0369585441118823 -0.408954182375065 -0.637828365118704 -1.09793244639958 -1.1619064309731 1.10020757473819 0.628305520756565 -0.0606493791455373 -0.679515438597754 -1.37241531426776
MMP1286 0.100620811556132 0.346819786501743 0.230912454731492 0.295195476190532 -0.0951834778523122 0.571340971511885 0.209174237616945 -0.84455693698177 -0.84850384115971 1.86941837983451 -0.768777851749729 -1.05700088616529 0.960016868685755 0.779260487898521 0.379126296910838 0.481941039170239 -0.41233859958689 -0.379126296910838 0.97756277555331 0.819745220887196 0.245695549411397 -0.877070948331218 0.892937800964752 0.927228573118153 -0.336716478530405 -0.216708784313082 0.449668146967857 0.511640012137476 -0.457340140969261 -0.695702081777848 0.321288769620013 0.0367978516929324 -0.0367978516929324 -0.21049953871656 -2.34137212481461 -1.01100877924699 0.152113207679659 -0.221862967842776 -0.337934685974622 -1.27086513901143 -1.00744494208482 0.691788376164634 0.937466854313104 0.221136520301431 0.318500845429003 0.0371200254762304 0.105024311619263 -1.04503954356018 -1.04238653480090 -1.02099183792061 -0.914664112530922 1.15192110277387 0.515687041246871 -1.07821213583327 -1.21992365743132 -1.6203973487055
MMP1555 -1.38194541024992 0.935851922434836 0.97814330991893 1.11705813389345 0.117316765439667 1.51994216423856 1.43178762989924 -1.22184569178415 -1.32263502788271 1.10747923610228 -0.539627438092521 -0.591775137816177 0.610406283284855 0.697891677732921 1.03214198443162 0.904041436486319 -0.84502934354933 -0.681532274876879 0.539627438092521 0.650540770921685 1.12767805590581 -1.54551827528672 0.594799808908952 0.732914599554092 -0.706977444274114 -0.301624633890997 0.676285038338338 0.301624633890997 -0.532639755793871 -0.361273793566031 0.0959874779213728 0.0352323979653594 -0.0306747761813140 0.0306747761813140 -1.40521387475562 -0.460558506032569 -0.368246173891061 -0.335726854797642 -0.462400410349869 1.40034502753802 0.287989655381214 -0.164738985988522 -0.63505886486452 -2.34609611773941 -0.581031160780662 1.14891385239827 -0.471434367825529 0.84187644531975 0.90072278074695 0.473790076497433 0.57278163903763 0.382581701357364 0.440831752199019 NA -0.264006853363869 -0.173185725503431
MMP1558 -2.28223308236929 1.55441324923621 1.45213690842349 0.893141565951038 -0.684650018728855 1.72618807475995 1.62138604793787 -1.46987894603074 -1.64697307144587 0.991425354364985 -0.418960574546462 -0.415006349228416 0.880477955698592 0.888712778411318 1.50902108680787 1.55086782026617 -0.367303335433636 -0.969168100537677 0.58315306018848 0.361766006923005 1.44107215648204 -1.11182087646198 0.436686450757594 0.305746037279583 -0.357168863247231 -0.489884300236966 0.687704638321925 0.474602921386863 -0.36259105541079 -0.305746037279583 0.0737071287968655 0.0279523209754233 -0.0279523209754233 0.0523199783099062 -0.924883496482199 -0.642739286296414 0.208619998371336 -0.208101149763931 -0.323104218051388 NA 0.756325056749633 -0.446886737791726 -0.564228074452067 NA -0.83189346327758 -0.372145060903708 -1.01635780804663 NA 0.31440518088551 0.490530865012106 0.382231111266534 0.473642774396708 NA NA 0.164613454206413 0
MMP1692 -1.03457098749323 1.20861443301980 1.12366839237557 -0.100889697528803 0.264591311562688 0.0377470811370545 0 -1.49827463850127 -1.67309487926384 0.995683291280076 -1.03927628763546 -0.889484798622427 0.375563647501786 0.391816519395757 0.362819593620546 0.381213645701086 -0.362819593620546 -0.411794104800014 1.13057254601991 1.32829527352417 1.19401262889237 -1.59994347991273 1.20503810047374 1.15052055342513 -1.17531665446330 -1.17549371085649 0.282942009322526 0.349859698832226 -0.345196380753690 -0.282942009322526 -0.0739849278467446 -0.142738598168972 0.0739849278467446 0.146475210686484 1.15119693646673 0.516805683474717 0.389330353497554 -1.06948912116562 -0.904015850727682 NA -0.8115822254782 NA 0.760977111319635 0.676957202606014 0.66351414519826 0.759047625657301 0.794822175318535 -1.06277768338809 -1.25297864955234 -1.07732330961518 -1.22218352524848 0.79849157146812 0.972823270835771 NA -1.01125898794752 -0.845689782950175
MMP1720 -1.04087082716728 0.789915539952111 0.924769030213099 0.108365854694654 0.28769170140231 1.18147545508147 0.764446831765196 -2.18761918225737 -2.06909194961148 0.452213484399264 -0.575446930084188 -0.38556375935524 0.38556375935524 0.397572600317705 0.84013552277203 0.889251825120133 -0.780232172419796 -0.817747518475147 0.69985944319492 0.580584391407246 1.60909942399252 -1.87009916799166 0.695851172491074 0.588719094486725 -0.397884945236985 -0.438823912315017 0.728404878723814 0.68345273647852 -0.281050223377881 -0.341068221593111 -0.00884476072342436 0.00884476072342431 -0.094606524387204 -0.271409123560158 1.09818586678539 0.178493449684076 1.59089499275052 -1.88054857980335 -1.63887056853655 -0.518339808430817 -0.426064214972734 0.479530688851547 0.532280222985841 -0.0166590838700943 -0.137823720389507 -0.276216437448159 -0.343287188874986 0.152374155392850 0.0889838197213212 0.0243362763104845 0.0564733308277044 -0.0278178410116492 -0.30424566007872 0.0531519121702261 -0.0876255587100127 -0.0480284263094479
[+] Show/hide bicluster #140 motif PSSM #1. bicluster 140 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 1 0 0
2 1 0 0 0
3 0 0 1 0
4 0 0 1 0
5 0 1 0 0
6 0 0 1 0 [+] Show/hide bicluster #140 motif PSSM #2. bicluster 140 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 0 1
2 0 1 0 0
3 0 1 0 0
4 0 0 0 1
5 0 1 0 0
6 0 1 0 0 |