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[+] Show/hide bicluster #119 rows and columns.
bicluster 119
Methanococcus maripaludis S2
13x57
[+] Show/hide bicluster #119 rows (genes).
bicluster 119 genes
Methanococcus maripaludis S2
13
[+] Show/hide bicluster #119 rows (short gene names).
bicluster 119 short names
Methanococcus maripaludis S2
13
short_name
[+] Show/hide bicluster #119 rows (long gene names).
bicluster 119 long names
Methanococcus maripaludis S2
13
long_name
[+] Show/hide bicluster #119 rows (NCBI RefSeq gene IDs).
bicluster 119 NCBI RefSeq IDs
Methanococcus maripaludis S2
26
[+] Show/hide bicluster #119 gene upstream sequences.
bicluster 119 upstream sequences
Methanococcus maripaludis S2
13
upstream
[+] Show/hide bicluster #119 columns (arrays; conditions).
bicluster 119 arrays
Methanococcus maripaludis S2
57
[+] Show/hide bicluster #119 ratios.
bicluster 119 ratios
Methanococcus maripaludis S2
13x57
GENES H_vs_Leu_3000070239B.3 H_vs_Leu_3000070260B.1 H_vs_Leu_3000070261A.1 H_vs_PO4_3000070247A.3 H_vs_PO4_3000070247B.3 H_vs_PO4_3000070248A.3 H_vs_PO4_3000070249A.2 H_vs_PO4_3000070249B.2 H_vs_PO4_3000070250B.2 H_vs_PO4_3000070253B.1 H_vs_PO4_3000070254A.1 S2_vs_S40_BR1_3000069792A S2_vs_S40_BR1_3000069792B S2_vs_S40_BR1_3000069793A S2_vs_S40_BR1_3000069793B S2_vs_S40_BR3_3000070266A S2_vs_S40_BR3_3000070266B S2_vs_S40_BR4_3000070272A S2_vs_S40_BR4_3000070273A S2_vs_S40_BR4_3000070273B leu_vs_PO4_BR1_3000070030A leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR3_3000070251A leu_vs_PO4_BR3_3000070251B leu_vs_PO4_BR3_3000070252A leu_vs_PO4_BR3_3000070252B mma_0070m_0.2 mma_0492m_0.598 mma_0649m_0.885 mma_0783m_1.23 mma_0849m_1.4 mma_0912m_1.56 mma_1444m_1.58 rapid_H_vs_slow_H_3000070036A.3 rapid_H_vs_slow_H_3000070036B.3 rapid_PO4_vs_slow_PO4_3000069786Alow.2 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069787A.2 rapid_PO4_vs_slow_PO4_3000069787B.2 rapid_PO4_vs_slow_PO4_3000069787Blow.2 rapid_PO4_vs_slow_PO4_3000069789B.3 rapid_PO4_vs_slow_PO4_3000069789Blow.3 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Alow.3 rapid_PO4_vs_slow_PO4_3000069790B.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023A.1 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023B.1 rapid_PO4_vs_slow_PO4_3000070023Blow.1 rapid_PO4_vs_slow_PO4_3000070024A.1 rapid_PO4_vs_slow_PO4_3000070024Alow.1 rapid_PO4_vs_slow_PO4_3000070024B.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0063 0.355290404575985 3.09164221271116 -0.542045116447188 1.84247028657268 1.79858927298302 0.0173570513160557 -0.442924100925166 0.189446756965052 -0.63281356570353 2.28769914679499 -0.0175061674235661 1.04639587783784 0.688553104961445 -1.99901913558047 -1.64213147140381 -0.426378133479718 -0.0439114403758577 0.0439114403758577 -0.502020502158449 -0.789000478165148 -1.33966013172640 -1.27643860033623 0.657067828548667 0.811062255422605 0.0455802690917871 0.115804207781896 0.375414952171105 -0.265280074626400 0.813092820651232 -0.062586808748931 0.062586808748931 -0.140083741693399 -0.191867406564126 2.31571192371044 0.857376782333785 1.32313634234758 1.34140840668443 0.140806814936356 0.0777214905067893 0.358127445371655 -1.08638470330407 -1.16909199248777 -1.78688091250460 -0.287286638918947 NA -0.169229351818916 -0.4398645070204 -0.206346284254272 -0.778664107531764 -0.55405964813026 -0.832170148969951 -0.555927781861078 -1.12101482134279 0.125583228301878 0.468482486952391 0.182262696252222 -0.0462816713543352
MMP0154 -0.526100623167075 0.189161429927843 -1.13215950296154 0.584257099358679 2.10817611253900 -0.666171802724868 -0.584826228355937 -0.0288793820718131 1.37623665676585 0.0592902793064374 1.50766707495842 1.17712894604046 1.07414788788883 -1.2114803544426 -0.867077221009751 -0.645679945833537 -0.502976559330956 0.399329362245383 -1.46650237490153 -1.44367791171255 -0.95172865617617 -0.829581023860822 0.360805482435048 0.64583343729401 -0.500030927713524 -0.00671657409345696 0.00671657409345692 0.202635063883522 0.0639311913723396 -0.0508069032523568 -0.0148145373475560 0.0148145373475563 -0.181519510184709 2.16805948470935 1.965759851668 0.107663485884672 0.462495786494433 -0.986776337660525 -0.907621349127761 -0.516138685168696 0.781174427918738 0.788383885467252 1.12439628042187 1.72608511934864 1.9114826917737 -1.31043424286692 -1.21097409605620 -0.49067352288487 -0.585779815601239 1.29779146911526 1.47378895126216 1.6769688772069 1.34281835338750 -0.932509990298188 -1.07404563161926 -0.0181522449506295 -0.154936857272766
MMP0157 1.97503923341305 0.562063109384456 -1.09800338810308 0.215912231750126 0.146710855506454 -0.911685397160468 -0.244996166010892 -0.233398153549798 0.303188409386410 0.554117130764444 -0.417494786919661 1.83763600469794 1.67859933666501 -1.45160344172424 -1.31795992666397 -0.106448068060939 0.140844021974717 0.178546075050119 0.313805409044391 0.268780339865496 -0.893250902008489 -0.71471524736923 1.24227918764548 1.24496363903524 -0.433034288171144 -0.420549387798997 0.420549387798997 0.587751373707171 0.262078849794312 -0.0745981688458568 0.0745981688458568 0.0915316283632618 0.157013446241309 -1.30554374394356 -2.61608957119724 -0.982099250293212 -0.894203609943006 0.667176601421203 0.63892197057763 0.69537255316582 -0.602198264002795 -0.499893551371822 -0.467110875278373 0.204613111220674 0.258304902354494 -0.343032453186326 -0.425095798591129 -0.139552930386799 -0.0522516298355228 -1.28143566017994 -1.03754980105615 -1.19331957626745 -1.33071082452952 0.737057389689607 0.917988201167627 0.90777664199505 0.987268503175713
MMP0397 1.93225081852191 1.57152493054773 -1.28900250067188 0.40033752802202 -0.150511835274353 0.262990605496924 -0.327080604582842 -0.446150488915685 0.62771706887864 1.78809164751086 -1.70277396730281 0.968924614090514 1.10974626681705 -0.849714739913793 -0.916645777743774 -0.187276232438239 -0.145418522198300 0.950317248614429 -0.658953441995007 -0.657404141228607 -1.03887504169768 -1.03747361056047 0.761556862567437 0.840658564850987 0.336435931928513 0.144120784069443 -0.608606912166168 -0.558805756214039 0.320590484239465 -0.0398733377844841 0.0398733377844841 0.147566374925934 0.167069838345252 -1.34395085121489 -2.53849189995949 1.01930700831667 1.11104082210145 1.18812349343086 0.792891415194961 1.19744750838717 -0.88589438183356 -1.09405574136708 -1.03887859486860 -0.399025154569237 -0.747518736435259 0.518338479930723 0.607417654183253 0.602189914610590 0.969567612265243 -0.283943684744537 -0.463238113860223 -0.592476452621444 -1.03382924627578 0.0620041143669332 0.103389623496231 -0.0678536055323095 -0.0954799115444862
MMP0399 2.47493479041505 0.962719130603703 -0.7338190223182 0.319212466881601 -0.880180192547822 0.508253025643591 0.000635557648960891 -0.394618424290295 -0.056344870207924 1.38992594832096 -0.720047632568683 1.14997897720461 0.867346664064327 -2.22171735418133 -2.02294506426201 0.180019840351763 0.0103926204514915 1.05368648202150 -0.44933672116078 -0.76357003862323 -0.835942715304807 -0.72528628822769 0.956620529132196 0.864971618086688 -0.282245866463849 -0.244836597966363 0.304150586730702 0.129310009998758 2.04323190577418 -0.0464607969777029 0.0464607969777029 0.26520368568447 0.211922219029557 -1.24850352362017 -1.06570957627094 1.66420904349799 1.53716650932309 -0.20010602595708 -0.710874855644058 -0.513577897093182 0.142819713265023 -0.445500077724529 0.666898239639883 -0.096164117501585 NA -0.421668741338613 -0.220012746290221 -1.49052408657336 NA 0.531438654916542 0.393167283688119 0.264372421002046 1.3519313520532 -0.850427671436888 -1.14198242311660 -1.53372672238869 -1.48812388008245
MMP0401 2.41243928703218 0.204274892942325 -0.852461700678577 0.0101113669056227 -0.93124175811526 0.280767822720354 -0.631965734319213 -0.578370329191603 0.49318768500832 1.29743121663314 -1.31370630667670 1.12547739802206 2.50477336315892 -0.230233159679201 -1.23441860750923 0.215709195884093 0.0470459131771146 -0.0470459131771146 1.14682429868838 1.32427427450229 -1.31649123016431 -0.926528023050584 1.08711249833516 1.17732813866394 -0.33567910307489 -0.353067943228405 0.488272871408952 0.468344810572041 0.409329198354393 0.0079974549645479 0.0370152476399682 0.0244246597565922 -0.00799745496454787 -2.43998028019726 -1.60586734213807 1.04038097249692 0.515657214340513 0.85053133842022 1.20754122938118 2.08300984931992 -0.583255734946463 -0.897898829069255 -0.20843359024069 -0.754509849111512 -0.948237457322239 -0.00525453753242757 -0.0860573115263229 0.627184684251586 0.987147027460882 -1.65369167987629 0.369773436692372 -2.06899437265372 0.566999032732017 -0.533435802616803 1.20599380101597 -1.48977400854492 0.598051485216529
MMP1362 1.82255132705489 2.27269838273317 -2.75602190177053 0.647940755484048 0.0223831514213757 -0.35974801360169 -0.160892709729570 -0.144543124929047 -0.337823678686576 -0.326985486172617 0.161054983216062 0.718076174043586 0.701007524235583 -1.00619651132621 -0.448381563380093 -0.0575495170212518 -0.0723711798191188 1.29074768378275 0.0967291295110202 0.0575495170212518 -0.95691142175286 -0.99950814892761 1.42206211193799 1.46118980940902 -0.187834162354472 -0.157259838730261 0.100950428675639 0.128668921163525 0.349432902179810 -0.0294641417880535 0.0294641417880535 0.0564236908166641 0.0447731132615026 -1.85584695176386 -2.29251847814899 -0.618230678692753 -0.384562888464734 0.72795795716747 0.674474786408585 0.907178539489898 -0.428423788113362 -0.420193139128591 -0.339112225210757 -0.348215907658199 -0.422846173221144 0.144026910422493 0.060710249981543 0.234081044739452 0.223317900376394 0.217070348589179 0.485138969410596 0.368698678576443 0.626151328285942 0.566740733360986 0.543586775359676 0.524209376257054 0.589162139150534
MMP1419 2.83494734729719 1.24843453533702 -0.89679820238664 -0.699909423775486 -0.440772283194143 0.0418437186547691 0.300985488122835 0.259504281973336 -0.16110544804427 -0.0833505995261668 0.406481696647006 1.62478990004459 1.62346606717878 -1.62684986325189 -1.75729668524919 -0.532938262791059 -0.58245979419172 0.858484902228666 -0.126450168287868 -0.103667057823530 -1.04882168259279 -1.12184144566281 0.79482376896317 0.923894661571419 -0.321639439977437 -0.256598919979666 0.256598919979666 0.387985501561643 0.463381094858893 -0.108959988038426 0.0490046177358749 0.135296547961281 0.146083039239457 -0.0490046177358748 -2.70149590443612 -0.924025055584733 -0.878793461741473 0.622334588650749 0.84115266908374 0.5657906132667 -0.729688201961809 -0.651150357198182 -0.976272137934567 -0.281449963814406 -0.190321931738426 0.238389287281957 0.359696252385575 0.0817467762327114 0.221984237677862 -0.659536938506483 -1.08507450492374 -0.649740099048438 -0.840654001090911 1.02530725425216 0.720878637187083 0.85675351615604 0.752992393927933
MMP1473 0 1.02206771104851 -1.55013560381737 0.584904274847456 1.83170750867550 0.697715421825792 0.767550194341623 0.190401715022663 0.370103203571893 0.147150404179359 -0.0774264532202145 1.02473682742904 1.29756969436930 -0.9111241320866 -1.57133024322439 -0.00509370527981992 0.0599693553032724 -0.249389968583717 0.0791882930873603 -0.446179335265194 -1.2179634426384 -1.33989995456087 0.654038465575103 0.71751729342045 -0.0180255248404745 -0.178490018025900 0.0180255248404744 0.279605634278072 0.806652322870074 -0.535158925681614 -0.0211925225653439 0.0211925225653440 -0.0769422215660685 0.937625930796434 1.91954614299070 -1.59590755196111 -1.35509068416560 0.167592209812146 -0.195048434852372 0.0752548762228362 -1.23595583261783 -1.69396767187614 -1.80598736437308 -0.189492249604451 NA -1.78089218829236 -1.86010596645614 -2.18535854448043 -2.497046705281 -0.0838082645855441 -0.269018836461053 -0.853912764430354 -0.197773995982905 0.0583431092253214 -0.175014458730702 0.0652847030383679 -0.415034961362556
MMP1497 0.334183349194154 1.35293822702579 -1.71041405880277 0.729817494339609 0.288782154538548 -0.327345342553911 0.434509600942191 0.389636439042307 -0.137930073101630 0.614362234837197 -0.191921700733124 0.871814996518879 1.18158225184824 -1.28311225792446 -1.35468918067535 -0.698730481187775 -0.718564735283782 0.674997803872998 -1.07808736785467 -0.674997803872998 -1.17601416167450 -0.986208855877867 1.33189784733553 1.26965840638413 -0.301745438743581 -0.355342980561767 0.339952760221503 0.301745438743581 -0.00573562636114370 -0.0896743121463432 0.00573562636114374 0.0495249276183372 -0.303216093592002 2.52555070752131 0.935237998387262 -0.350449116214367 -0.53497816232473 1.85958723747973 1.38518469339027 1.88473568182914 -1.30024079282265 -1.32777956029773 -1.67351157082480 -0.59865411492712 -1.35438949719084 0.84123802496423 1.02411590022636 0.927052298578274 1.19835894372626 -1.24554559519634 -1.42753335884153 -1.06822860943575 -1.85293202707219 1.11697409674881 1.22245062070988 1.26114614726228 1.31904885393144
MMP1509 0.966113655461401 2.18630772612712 -1.55898505287779 -0.02569161557494 -0.607062410922741 0.102949052713574 0.604930404182971 0.251478411765058 0.483018602287727 1.26076069053394 -0.360133359324566 0.791333733176121 0.935744261390466 -1.15695670087647 -1.39443516903568 -0.102171063648824 -0.160568322972339 0.146406693902533 -0.443490161271798 -0.386054191237681 -0.893290908231337 -1.14266646687327 1.16814277109195 1.10657102490856 -0.334823405965762 -0.480563898211261 0.654935070594533 0.76729750353018 1.07954489372976 -0.414376842217162 0.141182821060202 0.0284169895424687 -0.0284169895424687 0.0308226606148471 -2.40191221132771 -0.466434635873429 -0.272056625884972 -0.450763133933898 -0.0276549458919252 -0.680002558077917 -0.162636204679390 -0.261774016181633 -0.53499264690361 1.47819498071152 1.36479012869896 -0.90010915369149 -1.16194206996467 -1.15427966202023 -1.19468900216983 -0.125153712395434 -0.332065369047984 -0.428634720998505 -0.0708264102488746 0.139515972921739 -0.227987803374887 0.105084497318243 -0.222834560914430
MMP1579 0.952585230645953 0.233464663066516 -1.21341872429728 -0.809642467255988 -0.572525201195802 -1.11365393914765 0.113611603601010 0.079982262592709 0.752238819867986 1.61509237388780 -0.317092993084347 0.574102297948036 0.566925675997531 -1.08031640977822 -1.03436559147305 -0.0251183772845146 0.0792602482831536 0.0251183772845146 -0.458382242375727 -0.694383406493738 -1.07143645121906 -1.30809200119834 0.840631414777322 0.852535419617328 -0.859130249863368 -0.82164609920441 -0.0436939229217125 -0.209850912958581 0.565646269541171 -0.166496270371768 0.000100238573372516 -0.000100238573372516 0.287784944152526 1.87716776354732 -0.420701292444497 -0.645063010154968 -0.427788332948235 -0.683303787616594 -0.516988176858857 -0.839721001535292 0.134616936312752 0.198400871451624 -0.089599326413516 1.13413232377194 1.18670734969054 -0.186660946736888 -0.411736356254315 -0.453600383845619 -0.521967921527067 0.285349701450175 -0.0546122215893179 0.167876607437730 0.118055222668476 0.410031978527478 -0.0479215328286988 0.428040250408534 -0.0149715609812694
MMP1658 -0.440424432504554 2.24387206580421 -2.06954060144537 -0.362523587058029 -0.577133573200609 -0.852065389470283 0.969402996338883 0.795289970526938 0.749644517447491 1.38747610271547 -1.28856698295309 0.634115769974004 0.510963842068823 -0.544396749891692 -0.72041294551714 0.544832734468136 0.307328291772995 -1.34273758928148 -1.10123439989215 -0.307328291772995 -0.978777082458238 -1.16434897366092 0.688165978679887 0.457525301853994 -0.377137097506030 -0.555105752952473 0.0941673622571338 -0.0178850457372305 0.146423503292688 -0.0825356118222029 0.167452285282235 0.162925910683588 0.0825356118222028 -1.99888945752435 -2.21035602080489 -0.568766441900927 -0.521941565675611 0.654532376847003 0.772067000230894 0.446238834385185 -0.898710888726246 -1.07381665429762 -1.26889686419161 -0.434917688460925 -0.529200260526133 0.286092405441235 0.113999411395258 0 -0.0598918002002329 NA -0.442255871560534 -0.645459128520608 -0.565092209099700 1.42439318265009 1.81709997106146 0.319574449590863 0.585579693721633
[+] Show/hide bicluster #119 motif PSSM #1. bicluster 119 motif PSSM #1 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 0 0.666667 0.333333 0
4 0 0 1 0
5 0 0.666667 0.333333 0
6 0 0 0 1
7 0 0.333333 0.666667 0
8 0 0 1 0 [+] Show/hide bicluster #119 motif PSSM #2. bicluster 119 motif PSSM #2 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0 0 1 0
2 0.5 0 0.5 0
3 0 0 1 0
4 0 0 1 0
5 0 0 0 1
6 0 0 1 0
7 0 1 0 0 |