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[+] Show/hide bicluster #66 rows and columns.
bicluster 66
Methanococcus maripaludis S2
13x57
[+] Show/hide bicluster #66 rows (genes).
bicluster 66 genes
Methanococcus maripaludis S2
13
[+] Show/hide bicluster #66 rows (short gene names).
bicluster 66 short names
Methanococcus maripaludis S2
13
short_name
[+] Show/hide bicluster #66 rows (long gene names).
bicluster 66 long names
Methanococcus maripaludis S2
13
long_name
[+] Show/hide bicluster #66 rows (NCBI RefSeq gene IDs).
bicluster 66 NCBI RefSeq IDs
Methanococcus maripaludis S2
26
[+] Show/hide bicluster #66 gene upstream sequences.
bicluster 66 upstream sequences
Methanococcus maripaludis S2
13
upstream
[+] Show/hide bicluster #66 columns (arrays; conditions).
bicluster 66 arrays
Methanococcus maripaludis S2
57
[+] Show/hide bicluster #66 ratios.
bicluster 66 ratios
Methanococcus maripaludis S2
13x57
GENES H_vs_Leu_3000070258A.2 H_vs_Leu_3000070258B.2 H_vs_Leu_3000070259B.2 H_vs_Leu_3000070261A.1 H_vs_PO4_3000070035A.4 H_vs_PO4_3000070035B.4 H_vs_PO4_3000070249A.2 H_vs_PO4_3000070249B.2 S2_vs_S40_BR1_3000069792A S2_vs_S40_BR1_3000069792B S2_vs_S40_BR1_3000069793A S2_vs_S40_BR1_3000069793B S2_vs_S40_BR2_3000070262A S2_vs_S40_BR3_3000070265B S2_vs_S40_BR4_3000070272A S2_vs_S40_BR4_3000070273A S2_vs_S40_BR4_3000070273B leu_vs_PO4_BR1_3000070030A leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR2_3000070243A leu_vs_PO4_BR2_3000070244A leu_vs_PO4_BR4_3000070256B mma_0334m_0.402 mma_0649m_0.885 mma_0783m_1.23 rapid_H_vs_slow_H_3000070037A.3 rapid_H_vs_slow_H_3000070038B.2 rapid_H_vs_slow_H_3000070040A.2 rapid_H_vs_slow_H_3000070040B.2 rapid_H_vs_slow_H_3000070041A.1 rapid_H_vs_slow_H_3000070041B.1 rapid_H_vs_slow_H_3000070042A.1 rapid_H_vs_slow_H_3000070042B.1 rapid_PO4_vs_slow_PO4_3000069786Alow.2 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069787A.2 rapid_PO4_vs_slow_PO4_3000069787Alow.2 rapid_PO4_vs_slow_PO4_3000069787B.2 rapid_PO4_vs_slow_PO4_3000069787Blow.2 rapid_PO4_vs_slow_PO4_3000069789A.3 rapid_PO4_vs_slow_PO4_3000069789Alow.3 rapid_PO4_vs_slow_PO4_3000069789B.3 rapid_PO4_vs_slow_PO4_3000069789Blow.3 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Alow.3 rapid_PO4_vs_slow_PO4_3000069790B.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023A.1 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023B.1 rapid_PO4_vs_slow_PO4_3000070023Blow.1 rapid_PO4_vs_slow_PO4_3000070024A.1 rapid_PO4_vs_slow_PO4_3000070024Alow.1 rapid_PO4_vs_slow_PO4_3000070024B.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0600 0.139643728246018 0.262172183871316 -0.261045313261315 0.194329253957878 0.665914441223743 0.556524752315572 0.217744347360139 0.237239274732668 -0.62025471571567 -1.19604105463249 1.73725826384854 1.43067679412183 0.809798631430155 -0.536984962872238 0.78461364757044 0.222398412874967 0.533740561453656 1.51502647960166 1.78358393361667 -1.96377133578413 -2.05598934050637 0.296260457975024 -0.552540660078945 -0.401356243625293 0.286130489793363 -0.091452486081784 -0.214188102399676 -0.661667786055658 1.57711493497119 -1.81071337354114 -1.67593524599123 1.80564307904999 1.88086498689962 -1.29572371960372 -1.05277199088015 -1.04596450829466 -1.04057739281959 1.30783550372155 1.55313894234646 1.38923483732055 1.73690381744848 0.73891244278008 0.608323439272554 0.790655592698684 0.746611503422489 -0.840297336992415 -1.18327780665515 -0.765822461058974 -1.14914020831035 0.95114733651404 0.984610850459835 1.02097722736671 1.05842386817107 -1.38024213893639 -1.33353823782830 -1.07694972923601 -1.41044452864978
MMP0614 -0.0813416543735661 -0.0142537041509343 0.285394895206947 0.648785581100066 -0.254844994129193 -0.103042340732152 0.0984172561616265 0.16118852462131 -1.36230038182763 -1.01307789579261 0.376981393855814 1.28679783657669 -1.01786520746476 -0.544900584894566 -0.460579809731822 0.458932633283672 0.298626278187843 0.92086542690062 1.5083933993583 -1.89755429667183 -1.74665523092668 0.933459950514726 -0.163726426613253 0.163726426613253 0.61708046895314 0.0590345998920292 -0.0590345998920292 -1.07894572324462 0.471668047255611 -0.979807549712173 -1.27859308811856 1.12474458968514 1.31537886931350 -0.973599189074927 -0.849928055870783 -2.24218932185858 -2.24959280805662 1.78925429328554 1.97428487755152 1.91994146529695 2.22368545768609 0.543334459841364 0.344954333668196 0.76063271050438 0.851141782179518 -0.60397031430265 -0.878300311344421 -0.295017359521368 -0.551859462836316 0.797335467381238 0.84776808097721 1.15350401577318 1.31830728889563 -1.15767749412540 -1.26221156584767 -0.523767549171308 -0.671257120617433
MMP0629 1.26612076128604 1.16780263939806 -0.630390783978213 -1.82521945508579 -0.706947629157242 -0.647946494476293 1.61970459524276 1.71122718522048 -1.33229097439944 -1.41725383486821 1.20891025097930 1.17582821656356 -0.190740301563794 -0.90774804187777 -0.490556300190739 0.508519374185997 0.706208092434378 1.59799068793888 1.57277313445178 -1.48714912813411 -1.38747834951101 0.673133316731017 -0.81469507236883 -0.281320130028793 0.547912007548631 0.388064216242704 -0.388064216242703 -0.039149804254446 1.52331650168624 -1.11261932878097 -1.21596315043750 1.75526580133792 1.82011885558113 -0.84931782386427 -0.846584842460503 -0.416078578353742 -0.0887888393614156 0.850888751017736 0.761881169176844 0.830112679550513 0.728856307949307 0.707774819953778 0.718992504711286 0.754269841898911 0.813510243239903 -0.257548030704192 -0.348204792165233 -0.230955730654270 -0.280570224448041 -0.17580871096638 -0.150421510950564 -0.0326694097431439 0.0192390324326326 0.771550245389119 0.650421697521102 0.905010896505033 0.823950359540999
MMP0720 -0.181636565981587 -0.192361154928358 0.061019798073649 0.739729681077138 0.327610221711364 0.165807125004907 0.293031256709450 0.257628212952423 -1.47072583102731 -1.44626665037285 1.76719677975465 1.52832704699040 -0.41744402148417 -0.456911929148808 -0.476552236466648 0.658940411419263 0.770828827334968 2.04993643770854 1.7909778998688 -1.28540319091587 -1.22865835624185 0.42796773556973 -0.318945442454946 0.505074375770663 0.295913921524932 -0.109354866861505 -0.276878862442724 -0.361834504213835 2.17192246504272 -1.09071315576616 -1.15805428178512 1.79901008997502 1.60451210297959 -1.03815874271714 -1.00588792130352 -1.44033199442677 -1.25240020200761 1.09335496636001 1.02660017614488 1.07490651373659 0.96014193525548 0.774829476103832 0.88145081064689 0.757103711509371 0.497781311828207 -0.62275156309515 -0.777888160960569 -0.812058807693128 -0.838251347330735 2.12562912098421 2.24326687522661 1.08639794968405 1.21140741401215 -0.841339811626932 -0.274326503175979 -1.74451130933387 -1.80707369532453
MMP0914 -0.127261024328314 -0.220439698650746 0.0139987875496177 0.941713910602638 0.328014793948476 0.359093639331737 0.0395825230243094 -0.136496829921125 -1.43833545240328 -1.30023886237266 1.52190997339763 1.70474749607560 -0.921862544993465 -0.452608777239001 -0.0920476653282785 0.955136596865972 0.0920476653282785 1.78636376782458 1.81326431403984 -1.77442109043781 -1.63575571367095 0.811625281979695 -0.376241194130179 -0.0598931674330261 0.861225629246817 0.0807373360666581 -0.0807373360666581 -0.840072912035513 1.09148263453469 -1.34476964298954 -1.3244495807788 1.24972334767891 1.28255061633977 -1.38589255053326 -1.26932379907060 -1.49637708899049 -1.61340863109025 1.50876598824011 1.57406510538132 1.72320241365546 1.77048295196375 0.701580858893187 0.554820816673572 0.961095432484164 0.896576919438821 -0.586965170730499 -0.79334779074641 -0.525755591943738 -0.647095124658685 1.05417300591441 1.01649130270829 1.28297925564766 1.18792792522225 -1.46511263890493 -1.69036055822576 -0.917846149443702 -1.29489558064689
MMP1154 0.0224182687319498 0.065008402422559 -0.252467119170134 0.523893406714871 0.105956663073618 0.219951113564415 -0.0778252801997 0.0654349830284182 -1.65186034501393 -1.64131620921707 1.58562307381321 1.63929447417544 -0.759226721157229 -0.165007643672165 -0.341199848952067 0.941067861150385 1.10564913565781 1.96606084504992 1.89510107004217 -1.60200547273523 -1.49577920174632 0.730465025723294 -0.760644234850218 0.523667558966321 0.360872049867416 -0.106499394759174 -0.113493267574939 -1.16618915705368 1.4489982674952 -1.38564440910322 -1.36767407819337 1.28979688517289 1.39176444446197 -1.05815280725890 -0.913534884078077 -1.36110817413890 -1.39269581491481 1.65556786009609 1.74978607582619 1.76517066979018 1.84555503080480 1.10106039018257 1.11647032242026 1.25381186399131 1.29616254538657 -0.912320773683059 -0.937235850651376 -0.927091419541675 -0.96154251516366 1.04400845926030 1.30142436875189 1.10664911723614 1.14751265584475 -1.26510519497195 -1.29491027692902 -1.19733037380746 -1.36025906986932
MMP1155 -1.13598700611243 0.181480939754861 -0.105589817706706 0.643328183446475 -0.00824173024599429 0.0090391711323028 0.135106124601728 0.00824173024599429 -1.95694863611135 -2.09353185451793 1.09036266087857 0.891059763824784 -0.613519577286286 -0.367652045585329 -1.00015590373261 0.367652045585329 0.729564090444844 1.66302988773097 1.63496721526932 -1.87341594362034 -1.90049778028281 0.849755828006569 -0.394137651761838 -0.0448291882665402 0.405499319625763 -0.0759168979924264 -0.103145950396526 -1.08431839531146 1.18856891621636 -1.43131558307056 -1.38408227133397 1.12200788512940 1.11951586270383 -1.12464746306904 -1.25291709160353 -1.42109049581135 -1.33658872047153 1.51639016032807 1.36784112031430 1.54659258261837 1.43911946432552 1.13976516273118 1.24694717583714 1.10657541243494 1.25698211389386 -0.689075456334069 -0.677083887077413 -0.926611293256625 -0.947584777348308 1.39525082117803 1.16122723559134 1.38577725609277 1.32340077685547 -1.26175574754062 -1.55622683816035 -1.27258361551986 -1.51521233670328
MMP1156 0.778970342279463 0.669032913945164 -1.70267679476952 -0.000363747647590266 -0.611659812076144 -0.501551634310061 0.293113250238597 0.170058303509548 -1.65495118603638 -1.59868378827960 1.02219903146807 0.87276563961233 -0.796910995752965 -0.279024952679048 -0.877314495978657 1.39129920866423 1.25521832090320 1.75201107914902 1.46579254312939 -1.23200708598905 -1.37283705791575 -0.416930309301357 -0.259445793015159 0.132756915021935 0.351176404356348 -0.0823219701300077 -0.00825619758738269 -1.32634318720715 1.50419587487264 -1.73909211408885 -1.8462852626974 1.22966105934947 0.827032499086259 -1.04486103230556 -1.22313253983829 -1.50289778501227 -1.59046841594511 1.23047475930696 1.30723660593550 0.867662968078586 1.12180609768576 0.587470999947311 0.702320919546287 0.43830897453062 0.754714050201548 -1.03563266721681 -0.941639321830228 -1.03419532808054 -0.896913996001168 0.786969926875914 1.02286884259266 0.282062377698958 0.731698835970422 -1.29631122056246 -1.25999854018609 -1.64050509150561 -1.56503800763410
MMP1157 1.47879115070867 1.58229483421442 -1.12666252304217 -0.0930145704807313 -0.314639173373028 -0.149828530263838 0.881354281363292 0.871003432511376 -1.27880522678166 -1.26004440038881 1.77495851841122 1.70136061265469 -0.840063804636389 -0.604589514244762 -0.484818127417883 1.13229380882626 1.01994741833082 1.56630412679688 1.46600335923033 -1.52852357906855 -1.44205753785429 0.0103920373461341 -0.411426766901913 0.354614548845815 0.240261626076853 -0.140532103501359 -0.0213576009533821 -0.901964008785837 1.85276501879263 -1.29708658991442 -1.20228005583145 1.32285213665076 1.41243283769033 -0.651811961392402 -0.513265612029366 -0.895707684088487 -1.02967419002803 1.89907965797885 1.91786947218774 1.89358116595748 1.92325200760135 1.14516973484196 1.1384715343955 1.10891224583987 1.07513506884182 -0.576206728169601 -0.606647743144497 -0.483497113447717 -0.491047107885595 1.52480719464488 1.59076202506312 1.40230972628241 1.46298771162496 -0.886994487822708 -0.948760187093598 -0.954463139303623 -1.09187064178828
MMP1158 1.17334502999535 1.02294769112151 -1.56592314285705 0.604893665423379 -0.508772710720445 -0.419374461044106 0.229435222074821 0.24805320466364 -1.42924725764428 -1.36434462731653 1.27733547786826 1.26671413140725 -0.911357981100302 -0.531549903103004 -0.737512862608655 1.05394461406719 1.31805700026323 1.87167121912088 2.05051261093027 -1.23034542913273 -0.94217140799107 0.365127518469244 0.0375426433227873 -0.0375426433227872 0.261237217635620 -0.120562732753199 -0.0497728142190482 -1.02365582401190 2.04625086397262 -1.23543347995848 -1.19622270910336 1.18991967307715 1.14206338801277 -1.01539937648809 -1.02756065857981 -1.54092604898773 -1.53626232053601 1.67164218739199 1.47133959389942 1.62242075845806 1.49694851237997 0.92801489403891 0.987106859784662 1.02084311048733 1.12037071018402 -0.254695919761973 -0.362656755875884 -0.432602393115069 -0.659025540540107 1.23532216317618 1.31215990701035 1.13468640254618 0.994278872327349 -0.957414834970774 -0.734100970065668 -0.907468141040829 -1.15505998258761
MMP1159 1.518136615517 1.40081804603239 -1.20830175818154 0.65809646762227 -0.677357844664414 -0.722055016605673 0.658960711953992 0.526207841070393 -1.92419166141728 -1.93231132301608 1.20874753489132 1.09007244851684 -0.811667554921841 -0.354706240209814 -1.17991025948450 0.420189155772315 0.684344850975148 1.47230821736103 1.32963011015056 -1.43463693921221 -1.34743659612626 0.420375947815274 -0.382094185809330 -0.0208071760745339 0.140961907595320 -0.134748710566326 -0.0484543073858417 -0.753717347870817 1.14142963568857 -1.36603098672746 -1.33342671369905 0.924513011163052 0.785678012866288 -0.979366498190902 -1.13849744913527 -1.67340568696644 -1.4220445699836 1.99360336385053 1.60346531411561 1.87753385773631 1.54875713710662 1.04573014133345 1.20275370323130 1.10870498733706 1.28903263765742 -0.676712867294944 -0.7566572410217 -0.734618449347665 -0.63953001964324 1.35095300939640 0.894770539371529 1.30931238956398 1.26454206099623 -0.778276358721241 -1.20843779644408 -0.948058913063927 -1.26427809548418
MMP1160 1.39485633913664 1.54975716220608 -1.20490451214703 0.211574550740606 -0.814057275743762 -0.820291548018682 0.650675928251962 0.51129539159783 -1.6963265107494 -1.64945427210448 1.24951800012689 1.35337872708409 -0.891860990451314 -0.530740045594266 -0.464766751027172 0.887985744144043 0.498008218635741 1.52869640884153 1.65984874806851 -1.32299128658844 -1.26095764503935 0.690056836301321 -0.286704042863149 -0.169945380872060 0.420742147372281 -0.0721572554253102 -0.0284698987523548 -1.08987199692985 1.02251241072598 -1.30579087443234 -1.41594113969363 0.875428778595248 0.905514255428933 -1.10291878890863 -0.999805449872953 -1.71457553262205 -1.57255273716755 1.68964197302441 1.64716137165582 1.86775329392743 1.73065383664090 1.02600517958532 1.06866746848012 1.07922751844126 1.13215527349956 -0.564552848781818 -0.778501046127661 -0.624469708716596 -0.82562962512492 1.09446771707285 0.93537675665921 1.15141351112969 1.08207876663199 -1.10543391322068 -1.41817136063136 -0.651431483554186 -1.04205858881117
MMP1161 1.85899913925108 1.85861290151672 -1.18738010302466 0.318002815417057 -0.409877417788454 -0.345332730664141 0.637551875237435 0.582784622828163 -1.71083499030154 -1.73474233969062 1.38992392732142 1.41216481135942 -0.911625124648184 -0.827406728321694 -0.393675808929588 0.652663991133454 0.396145954967271 1.5077636850965 1.69194398179831 -1.34592808124537 -1.31166215936557 0.284288040627686 -0.120348044848248 -0.345162969505039 0.386467400960623 -0.0966109978656789 0.0445014555228145 -0.586814149092777 1.62284984849928 -1.09386976404761 -1.13502241885506 1.08708094145074 1.15584957104305 -0.0803514694219324 -0.0569861037115145 -1.13258768260256 -0.959940212631784 2.15447475097378 1.94283257313607 2.25135005651655 2.15798289051077 1.20762263960025 1.21002665777989 1.41331706812296 1.50447830742236 -0.26590427492924 -0.473500876998191 -0.307711078235117 -0.451615309010007 1.12023895538804 1.07097012655482 1.52895736350577 1.54020217526475 -0.850331179099123 -1.03373444093672 -0.363491448046645 -0.613874218408425
[+] Show/hide bicluster #66 motif PSSM #1. bicluster 66 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 0 1
2 0.25 0.75 0 0
3 0.125 0.875 0 0
4 0 0.875 0.125 0
5 0.25 0.75 0 0
6 0 0.875 0.125 0 [+] Show/hide bicluster #66 motif PSSM #2. bicluster 66 motif PSSM #2 Methanococcus maripaludis S2 9x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0 1 0 0
4 0 0 1 0
5 0.5 0.5 0 0
6 0 0 1 0
7 0 0 0 1
8 0 0 0 1
9 0 1 0 0 |