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bicluster 29
Methanococcus maripaludis S2
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bicluster 29 genes
Methanococcus maripaludis S2
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bicluster 29 short names
Methanococcus maripaludis S2
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short_name
[+] Show/hide bicluster #29 rows (long gene names).
bicluster 29 long names
Methanococcus maripaludis S2
32
long_name
[+] Show/hide bicluster #29 rows (NCBI RefSeq gene IDs).
bicluster 29 NCBI RefSeq IDs
Methanococcus maripaludis S2
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[+] Show/hide bicluster #29 gene upstream sequences.
bicluster 29 upstream sequences
Methanococcus maripaludis S2
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upstream
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bicluster 29 arrays
Methanococcus maripaludis S2
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bicluster 29 ratios
Methanococcus maripaludis S2
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GENES H_vs_Leu_3000070240B.3 H_vs_PO4_3000070034A.4 H_vs_PO4_3000070035B.4 H_vs_PO4_3000070247B.3 H_vs_PO4_3000070248A.3 H_vs_PO4_3000070248B.3 H_vs_PO4_3000070249A.2 H_vs_PO4_3000070250A.2 H_vs_PO4_3000070250B.2 H_vs_PO4_3000070253A.1 S2_vs_S40_BR1_3000069792A S2_vs_S40_BR1_3000069792B S2_vs_S40_BR1_3000069793A S2_vs_S40_BR1_3000069793B S2_vs_S40_BR2_3000070262B S2_vs_S40_BR2_3000070263A S2_vs_S40_BR2_3000070263B S2_vs_S40_BR3_3000070265A S2_vs_S40_BR3_3000070266B S2_vs_S40_BR4_3000070272A S2_vs_S40_BR4_3000070272B S2_vs_S40_BR4_3000070273A S2_vs_S40_BR4_3000070273B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR3_3000070252A leu_vs_PO4_BR3_3000070252B leu_vs_PO4_BR4_3000070257B mma_0070m_0.2 mma_0334m_0.402 mma_0492m_0.598 mma_0649m_0.885 mma_0783m_1.23 mma_0849m_1.4 mma_0912m_1.56 mma_1444m_1.58 rapid_H_vs_slow_H_3000070036A.3 rapid_H_vs_slow_H_3000070036B.3 rapid_H_vs_slow_H_3000070037A.3 rapid_H_vs_slow_H_3000070037B.3 rapid_H_vs_slow_H_3000070040A.2 rapid_H_vs_slow_H_3000070040B.2 rapid_H_vs_slow_H_3000070041A.1 rapid_H_vs_slow_H_3000070041B.1 rapid_H_vs_slow_H_3000070042A.1 rapid_H_vs_slow_H_3000070042B.1 rapid_PO4_vs_slow_PO4_3000069786A.2 rapid_PO4_vs_slow_PO4_3000069786Alow.2 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069787Alow.2 rapid_PO4_vs_slow_PO4_3000069789A.3 rapid_PO4_vs_slow_PO4_3000069789Alow.3 rapid_PO4_vs_slow_PO4_3000069789Blow.3 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0101 0.157891213999130 0.273710934666099 -0.423322266963369 -0.627522364336438 1.54644489597041 1.61963633063854 -0.462999677273243 2.12570972976407 1.88464360257902 -1.39287238482345 0.799634628847526 1.31418106840031 -1.89380626088383 -2.18126576223202 0.783138245434174 -0.64363681936535 -0.677165353852823 0.274067182464232 -0.0462903199218382 0.950086207495836 0.258643457207499 -1.03984971007272 -0.758115876811347 -0.153479526261187 -0.338041305967372 0.255832657370688 0.153479526261187 0.552195651500374 -0.0292046165301937 0.344377826229890 0.351262155725037 0.379660014892519 -0.00134459560452086 0.00134459560452092 -2.18690407501696 -1.68101342477202 0.93265175385504 0.849552757280251 -0.825972346970981 -0.718984764523263 1.44392052565728 1.23752009854851 -0.961987404800675 -0.785888791576366 0.94274747749482 1.07056217998639 0.439431887583007 0.566196070977101 0.288625798435914 0.719619206187444 -0.148755200466085 -0.289845907101659 -0.457434743580362 -0.874161357332404 0.435655427809259 -0.295364383352277 -1.27086892696521 0.353066907752810
MMP0170 -0.960753391380963 -0.233095257649568 -0.477628209210824 -3.89961286576819 0.558008730765741 0.404398481114967 -0.0389246729738465 0.652082538443621 -0.121797481394677 0.129295466562155 0.378760665230068 0.234782745981718 -2.77533038099776 -0.24644411084015 -0.479328695522841 -0.565527548825152 0.824754290646922 1.28731850214169 0.0304647287560589 0.439696004640577 -0.0304647287560589 -0.948435650060854 -0.548525436937578 -0.381162105646858 0.181848727300758 1.07533497405701 0.627172577313254 0.253785964551923 0.164129616877618 -0.0148715327461863 -0.144156171437484 0.0148715327461863 0.0531901536177465 0.0696899563726393 -2.5213218328151 -1.60254334256896 0.519293417108604 0.614322561749563 -1.09758915193422 -1.09672660030305 -0.167605922776153 -0.197386943298563 -0.240738911917717 0.199423706308953 0.138359657714668 0.321660728868847 NA NA 0.414767024018282 NA -1.20265807389306 -0.0451941450427694 -1.49750007450459 NA 2.31115840430713 NA 1.19360812735624 1.14187574530989
MMP0206 -1.33867129760496 0.306885984967664 0.156132261137861 1.80554772596719 1.67745539076740 0.450575563523784 0.0797942288826218 0.339851391619074 0.127133874813914 -0.726004722981033 -0.96813534095462 0.727881206955466 -1.43949360540187 0.0202265538725844 1.46510628000535 -0.94753401391315 -0.617942602489584 0.158216368126798 -0.0202265538725844 0.7701769147623 -1.99126090144868 0.840922591466189 -1.27922110603615 0.197465223436591 -0.0728257435685088 0.601611780152687 0.396329522917236 0.223955698770904 -0.224855933110904 0.229085468896867 -0.0118254367893259 0.0118254367893259 0.0186444842809809 -0.338017594649635 -0.556572382610022 2.61791001739754 1.43857440955602 1.42912220788101 -1.57194719691862 -1.98107322496557 -2.40236158836167 -2.14545913846137 1.00211174577612 -0.0100156006638988 0.146475476908914 -0.913138238587871 0.248108044866275 -0.848296799823598 -0.627884158248285 -1.88321706272336 0.191933121922496 0.390724459733667 NA NA 0 NA -0.315646067532384 NA
MMP0213 0.870388968616998 -0.691334217259459 -0.678029055865941 -0.0411875297066457 0.234727811893782 0.66538129848137 -1.71234870111435 1.90754143621243 3.06660269169433 -0.6944028877891 1.99281668242167 2.03851429633887 -0.86530767015025 -0.653488433820588 0.615214522464441 -0.492118348278704 -0.664785182102018 0.402391406647921 0.145774500301446 0.0356388783978941 -0.382470209726411 -0.98867131335094 -1.43299290589620 0.0652879559089332 -0.0652879559089332 0.132770030626923 -0.57200009064763 1.11887725695820 0.324054092682862 -0.130892437436607 0.130892437436607 0.355306368288007 0.245358603508462 -0.133151638082762 -0.774482221510021 -2.62853288512125 0.803541421057103 -0.116316618568623 -1.36925377030885 -0.69201265641205 1.39721401655008 1.74124000506732 -1.08449101186085 -0.760608089248554 0.889803251433861 0.419442959001227 0.190482335906492 0.711214042054552 0.507886854191581 1.10168901987068 -0.592018512128756 -0.875953229954961 -0.757523140430895 -0.427675822907582 0.779514648259833 0.314857044944523 0.563112871997101 0.401892759961896
MMP0255 -0.129844282923488 0.974737354298125 1.37536111190396 0.762947465888488 -0.221738898428849 0.216359520942671 -0.924997200992775 -0.80458135374375 0.633778349529293 0.487439621276426 1.15038043661750 0.734464096804352 -0.926504522863942 -0.820813109183117 0.892251597763156 -1.46850534088194 -1.50366582961344 0.719907333657975 -1.05458454071879 0.817202503166577 0.85226378643855 -0.55028627506761 -0.701592583455279 0.556022524301445 0.574280465143041 0.93564586122108 0.65161999341073 0.624125757676795 -0.0452928763566974 0.631514840533655 0.594169762776547 0.0362917550511380 -0.412998257349758 -0.953640075341117 -0.0362917550511380 2.4037781716325 -0.0149561296893812 0.304229081858750 -0.350394154104418 -0.882314083189258 -0.352793988440293 -0.213272248396774 0.0479400416145954 0.0149561296893812 0.173202004993923 0.331094785803048 -0.903839600926739 -0.757412894326781 -0.623267451849145 -0.712779813994851 0.336198078103665 0.274573908230623 -0.175135646770382 0.425890544946302 -1.1962722122458 -2.41560314633163 -1.54066974175500 0.820731557229352
MMP0275 0.257004864503399 0.104880163718029 -0.0790507452828516 -0.513369186769054 0.418760071174611 -0.629534127794295 0.0217837455337697 0.135994878168862 0.237487879624933 -0.505435937921046 1.92650908201950 0.849483293589445 -1.79481941738219 -1.42978627992158 -0.276498789929522 0.635062511347667 0.305019235949892 0.276498789929522 -0.500909022950614 0.861764030788105 0.557659197407777 0.709150234536413 -0.800227347056263 0.0478071935406654 -0.0478071935406654 0.553730225392995 -0.080010529768163 -0.0515689437529456 -0.27588565439099 0.361618541956886 0.27588565439099 -0.295835280658165 -0.337628485053321 -0.631317286935904 0.303916141930944 2.54951173156195 0.866611410300314 0.929084407785577 -0.869678732236322 -0.952919637788514 -0.514015225808839 -0.116826663240384 -0.119356452754468 -0.0636556333456997 0.123819763492405 -0.410275233912252 NA NA NA NA NA NA NA NA -0.43383958826452 NA 2.68485958366548 -3.06581622742955
MMP0331 1.04055665573254 -0.260599186936724 0.573203325879964 1.04455821308491 0.557825960168135 -0.80312791216409 -1.56284178158361 0.572427422292598 0.485135325081985 0.244664622404328 1.0140256114308 1.08339062722395 -0.672216195119687 -0.235425524091195 0.385966968016628 -1.50113651074822 -0.6207946617783 -2.18919308654175 0.313850238851244 0.265339935171497 0.0307490829336231 0.666795395517935 -0.0307490829336231 -0.429349508443307 0.000773871217857418 0.816364039300613 -1.00647329092834 1.05770965937610 2.12559357618748 -1.26793326966694 0.328833408818028 0.498074982656653 -0.0834543349692966 0.0834543349692965 -0.293415685972101 -0.692130170704699 0.0302194348563955 -0.418928255094069 -0.275737858667141 0.233603192216939 1.12870142713822 1.26406788178840 -1.41417017074428 -1.39683522753643 0.697238313444595 0.593850235036215 0.574602892963253 0.93362668173099 1.10793611999587 1.13629640974549 -0.97661805027815 -1.53440564446606 -2.27806159163714 -2.65338735571954 0.698484347900758 0.317692536303057 -1.702021126318 -0.0302194348563955
MMP0369 -0.972954543229325 -0.836929931163216 1.28207632513760 -0.381126168629292 1.33857592538550 1.15310114241099 -0.196117457339415 1.17176906457753 0.935378564931937 1.46196143173731 -0.0103074074245852 -0.0641214328292466 -0.573073245998323 -0.750152806769166 0.676246963197508 0.813698821016137 0.741002168350612 1.09589037911944 1.16526768713664 -0.949372186932368 -0.302573071829568 -1.12644450366650 -1.25631648667377 -0.0416289199664886 0.491786579221643 0.810415403320778 0.626085009378014 0.396388193970473 0.226617172147870 -0.314037372661866 0.373693217647812 0.115934944029291 -0.115934944029291 -0.354183129979453 2.30369112084093 -1.17923472195489 -0.319684087541854 0.0563249632826955 0.0934385136431577 0.0609568953675612 -0.153983635930254 -0.115763732170954 0.398910168327197 0.572289438638569 -0.771828347175891 -0.856830618566093 -0.481546474016759 -0.87343671552504 -0.75109327367401 -1.0102366156531 0.806856960316038 0.719827005042458 0.730849554900594 0.50644141222079 -0.128205755941420 -0.769386708190509 -1.40106047339226 1.75663328029774
MMP0437 -0.041827463559345 0.0838425926275105 0.0941091976329403 0.242910246305201 0.211810653022453 0.227610071731627 0.058164836238905 0.165666260932803 0.395729245144036 -0.330569687522415 1.8931669036073 1.86274710914459 -0.0165589587589630 -0.793508825240836 0.835849319904738 0.659526167890319 0.608374446231084 1.28736160807223 -0.0189950687757767 0.0165589587589630 -0.144992341630618 -1.43771534387192 -1.45388327092721 0.335756867012284 0.0948165675898115 0.483095083977960 0.584722797665709 -0.0948165675898115 0.408778551435053 -0.810270314732548 -0.306763517509257 -0.688960686865054 0.166159295700063 -0.166159295700063 1.45992339798233 1.98641949862552 -0.113633170230943 0.00801614833657252 -0.585135112521538 -0.229176289885454 -0.101772228408540 -0.239452309903938 -0.128149320937592 -0.121193473104046 -0.07803972343418 -0.0945436051289201 NA NA NA NA NA NA NA NA 2.84312340407714 NA NA NA
MMP0571 -0.164558174441048 -0.934235561431015 -0.63841908269994 0.371849966562577 0.714613800642166 0.847161278633387 0.0366834941278592 -0.654900017086504 -0.211216660625705 0.222468472040479 0.871780751392799 1.22018612754188 0.0187904725684148 -0.184153216142467 1.09122800801732 -1.74502997483687 -0.934080358958693 0.291719909220898 -1.42837951698782 -0.0187904725684148 0.486792211941333 -0.849529735199593 -1.72046189780058 0.384627194354591 0.270052218267645 0.567222137279988 0.9767533754413 -0.577478392080677 0.289091496881195 -0.100269296095757 0.0844730898250643 -0.0844730898250643 0.405418525841531 0.268169369370343 -1.58197436641428 -2.3007540570496 -0.550841301915112 -0.703612783156576 -0.172341123332302 0.145236444216067 0.163170593732366 0.311171779096044 -0.456630658086432 -0.948865813897563 -0.255262690275553 -0.541906346163703 -0.411005770365552 -0.771792487336427 -0.425172808427946 -1.12941685487839 0.461981707139145 0.213515995346677 0.669703517693713 NA 0.0217876042352713 0.313945420029092 -0.604584297023941 0.989285207647732
MMP0586 -0.759834403800734 0.392413748393826 0.0185850720524438 -4.34702633915154 -0.0823149712811587 -0.0434246048944274 0.936217637134837 0.398661187587055 -0.689818998386959 1.54852550401124 1.38750145281971 1.97985247243198 -0.491800790300547 -0.404654405750206 0.281113650840245 0.595322617100261 0.106594537841447 -0.0271814007891935 -0.25355547620676 -0.432647183617208 -1.73120780751467 -0.932158248041488 -1.67360862071322 0.931310181065407 0.0252621480512536 0.355794552472236 0.657286114680677 0.0968739599730476 0.154656574371076 0.0782416134121388 0.576765512098431 -0.55058349360254 -1.22477046987173 -0.0782416134121388 -0.157548774088645 2.22105716205548 -0.503919593095654 -0.674213374427848 0.97496832855148 0.900650165378935 -0.402458640181512 -0.96746018021861 -0.0185850720524437 0.0835927004644129 -0.297907501846238 0.194006751931163 -0.55866283028653 NA NA NA NA -0.336138429472117 NA NA 0.413157993170125 NA -0.597041609028038 -0.812784860515443
MMP0644 -0.769075809738572 -0.357020183682206 0.081495763106959 0.626160952359291 0.746848362250042 0.770066734033365 0.172578332106682 -0.0411349292946889 -0.344184284191549 -0.378224270083762 0.794277181057992 0.864208173217505 -1.02824388800596 -1.02257618896639 0.591427888542893 -1.31643215717177 -1.31118895322961 0.87850980447508 -1.81985273542373 0.284807894777764 0.275046919153580 -0.275046919153580 -0.59050402601988 0.68214969384434 0.459605503846274 0.8864260049309 1.01341248806548 -0.288579109419322 -0.253176858803243 0.0799016875489133 -0.0799016875489133 0.275823412687019 0.233317573089777 0.262119344182990 -1.81555680443628 -2.23283407676658 -1.43716487373473 -1.40788828017263 1.44205175669543 1.33168170691619 1.69941041778057 1.48367283225828 -1.16954715675740 -1.18606670618529 1.00339315199996 1.17844407592927 1.28230864098563 1.50091742431899 1.30079350336164 1.71374895745718 -2.10621423149959 -0.970225327523221 -1.06609987098149 -1.84742951449695 0.372969127995617 0.296257501884395 -0.95270304591036 0.0411349292946889
MMP0645 -0.349341240323761 -0.125904204227324 0.65507627957236 0.454441494645289 0.0867392658283277 0.231476187422074 0.240975717336113 0.0760519865224295 -0.524112853989271 0.195961796487975 0.501778233875186 0.838970248839476 -0.553078723539607 -0.921219862847994 0.151511138842694 -2.09656777638127 -1.39722035571423 1.09968477771298 -1.81919147637351 0.158657020031437 -0.08293508854675 0.0263084100320181 -0.0263084100320183 0.273312783965563 -0.0393300249857299 0.803957728361682 0.463542710662394 -0.0236738455365566 -0.173938115279852 0.0336955704528092 -0.0336955704528090 0.57296838882975 0.487615856424766 0.490633370196659 -1.33093911010296 -2.23317572789907 -1.00872730412785 -1.07031245440242 1.30398305927307 1.3916250767318 1.84605221090376 1.52253758438996 -0.780971942945948 -0.982598510941326 1.28481180364491 1.06699686475948 1.19292156878416 1.56404221467717 1.6233652788148 2.07648451967138 -1.83688767627703 -0.994442503333032 -1.08502451518322 -1.66168590280651 0.873994171246525 0.76380818383009 -0.267327879012110 -0.443642955702094
MMP0834 -0.695917680515478 0.659309099011848 1.313302405555 -1.45855801188846 0.158826049471642 0.545063566358904 -1.11010041811385 1.08392020388119 0.415692123180818 -0.119178731251093 2.00864825560525 2.69952565466863 -0.576038762648544 -0.530625644919028 -0.632084432087907 0.461587651736798 0.149545629785047 0.556611729551664 -0.8757617352062 0.728392774507976 0.22569766238987 -0.339142092461512 -0.149545629785047 0.0550253686249643 0.117701222299123 0.424444509104782 0.129083560686749 -0.43769762313616 -0.520316805001856 -0.342569655738738 -0.0363755410411029 0.0438371904854317 -2.43156501267065 0.0363755410411029 0.773479911148726 0.70072882906652 0.139824085644168 -0.297651179229902 -0.418530789101315 -0.247652831990661 -0.223373138056108 -0.632427395777593 -0.813450889450327 0.446866609283338 -1.04013532838423 1.02067980922914 NA NA NA NA NA -0.336485991304899 NA NA 0.123842401818075 NA 1.26639226364450 3.30567061057525
MMP1057 0 -0.291451682996775 -0.70270009774323 -1.47977464693121 0.387948373201145 0.580882813562472 0.352232338999872 -0.408430068750214 -0.283053979596541 -0.153802642085940 -0.0451057096514289 -0.120840690367342 0.99950279161859 1.09487946395772 0.278458018528308 -0.144590448598750 -0.0328691286728984 0.104313794635100 0.340291805010605 -1.33416515227002 -1.16040045340131 -2.72445073106255 -1.70033149469475 0.138353676957863 0.156866634072606 0.457426499407664 0.522328189970697 0.309303846776898 -0.85807469303085 -0.0519141156423393 0.123221435403943 0.420534172401593 0.0519141156423393 0.552407960412593 -1.97586914276662 -1.86547705778004 -0.839879805187616 -1.09019107666543 1.51549668625953 1.02413550607916 0.855507959361052 1.14721264265672 -0.545177856058698 -0.695653153832546 -0.448611943763127 0.0328142366438749 -0.139870259556173 -0.7008756826463 -0.047742165222778 -1.49258679061505 0.452346648242883 0.371316917029114 NA -3.10752295067831 NA NA NA -2.77718842860018
MMP1068 0.118284332503774 -0.240947796647488 -0.512271743693617 1.05875918263380 0.0549667852562893 1.12412489227951 1.03702640454828 0.80837872160783 0.657650038717945 -0.407658966054583 0.761846190185497 1.82673164521513 -1.54708061902541 -1.16439403029269 0.232590858592610 -0.463752096643366 -0.729362070234513 0.746735244735227 -0.188273236512376 1.11771268482419 0.188273236512376 -1.13110379718978 -1.35284865702441 -0.820019323777306 -0.0899827499849632 0.840401360685002 0.0899827499849632 1.41475774739631 1.01472993316193 -1.10217337582944 -0.129606325040288 0.180676858618592 0.129606325040288 0.893585876766888 -1.13409245931588 -1.74738424481580 -1.83278543047741 -2.03470327256295 0.98538907566734 0.586001639636474 0.176141997006568 0.267231924179481 -1.25842380659696 -1.26883150182588 -0.0330285691504840 0.125243409220239 -0.511215138762749 NA -0.948374959708332 NA NA 0.108567951680701 -3.62767141751093 NA 1.01945266979238 NA -0.392573262722956 -2.70532870932239
MMP1074 0.0989631052030802 -0.626232327552149 2.00108711812318 2.28436960809128 0.722947002183656 1.02223022972908 -1.48027321045064 -0.0714591543476194 0.128308586138104 -0.803806649692716 1.25646625165567 0.743315820674976 -0.890055324488214 -1.10703520482023 0.669071558627639 -1.1774016020921 -1.27449072721922 0.206713660988490 -1.79534138722416 0.655606491019795 0.901183103916381 -0.0574027236430269 0.0521563984492987 -0.0231865864683101 -0.0228971582695295 0.337591711137056 -0.0436994510425535 0.292778906050125 -0.312722759928937 0.171900639782499 0.0380924997534256 0.0719223596565188 0.00817651825836499 -0.00817651825836507 -0.611998828693644 -2.8279127792533 -0.234555869687003 -0.16014836576284 -0.0285498052114589 0.289528171975675 -0.631562166946409 -0.476500937522633 -0.0754514351276294 -0.111434016882929 0.118731726626417 0.00523992146320872 0.0645955405226903 0.241803743253687 0.355191161626674 0.648842204879406 -2.15136106022812 1.04838459473111 NA NA -0.190430804802533 -0.0378378994519133 -0.846053089959926 0.71279258801474
MMP1127 0.0483519702188455 -1.12480565586915 -0.219052908745054 -0.792369660387797 0.0511177304826533 -0.28901765925001 0.240719022681324 1.43324354849426 0.528194904670993 -0.153197964169428 1.47371878922866 1.93602781809536 -0.903049995444657 -0.710463700600165 -0.703170106378741 1.14356868939112 0.834979910769243 1.42826467354342 -0.821600660086776 0.766871638336538 0.423769083934381 -0.642568390124008 -0.9629833930334 0.0783272820942779 0.0161388310037870 0.232869494679298 0.954860167696544 -0.0438111842445984 1.66966118702207 0.413099913048457 0.0172615348282356 -0.912899807847826 -0.0172615348282356 0.601015258110386 -0.989007484135956 -1.38327663191725 -0.0542170456980193 -0.561464801396938 1.17768987229 1.0471079131455 0.104873827058877 -0.037394855121486 1.09115856738261 0.0335550944421149 -0.0898583371764535 -1.09479843592495 NA NA NA NA NA NA NA NA NA NA 1.37274425426200 NA
MMP1178 0.496871392165323 -0.510130841034255 0.343086187847618 -0.314118469371603 0.639865026779014 0.259594247822025 -0.434886166689448 0.633671614773268 0.516538476884537 -0.617780829748809 0.924491382993858 1.17449056293649 -0.73682547138139 -0.90693447137186 0.9894388776117 -1.30029685197044 -0.771686879705608 1.41679768408546 -1.24420712767906 0.178862285127109 -0.178862285127109 0.375193929641265 -0.305395936805875 -0.685617305115857 -0.717014753717812 -0.462045663441431 -0.0750074553901835 -1.1672350355713 -0.120185816343183 0.0486256376214165 0.115113754369067 0.124853583522261 0.0421569209008047 -0.0421569209008047 -1.19807249398739 -2.69197851572593 -1.53988535619324 -1.65110886229377 1.07735821777793 1.21085234682687 1.10374627573070 1.20182058025092 -0.789956202572404 -0.82767866249731 0.783191609597442 0.611806328032872 1.14892376529564 1.04123823864939 1.03006121732628 1.13860432943906 -1.45855208228031 -1.16606722920395 -1.15916424758978 -1.61281166890242 0.873028474906635 0.73067358836632 -0.737180349094827 0.409729607090984
MMP1192 -0.720340342389493 -0.666573284450453 -0.00256508676754379 0.714410430872219 -0.793371959645942 1.12658583233406 0.357795109773843 0.540249172097922 0.341412989815600 0.00256508676754389 0.4897190181643 1.15272073100593 0.703395951296185 0.54302142227822 0.541756363972051 -0.374499736803124 -0.789179274205504 0.157695394866694 -0.629686677330506 -0.701898204953604 -0.157695394866694 -2.64444825084082 -1.82272161403846 -0.395176370832896 -0.482808117031535 0.505153005882139 0.515466665597533 0.231045772513981 0.278374062492891 -0.620971345576741 0.130098839653385 1.01798761832086 -0.130098839653385 1.06028901919037 -1.10809841496478 -1.81400304197485 -0.922874693543898 -1.14299950146851 0.783018325563343 0.94369940839451 0.160917103799150 0.172493779704195 -0.485502258297235 -0.34614689661628 -0.343575154418842 -0.409890288407199 NA NA NA NA NA NA NA NA 0.66264065272935 NA NA -1.46728000965433
MMP1297 1.54249097754943 -0.173736901777980 -0.197232058425318 -0.191296227254787 1.30825221301905 1.29948545719752 -1.20122619392222 1.05690407802150 1.01853402997227 -1.83752261711581 0.549633585267452 0.388076745925362 -0.746763463638156 -0.76665780615734 1.09860931699213 -0.97593656687377 -0.976822865085317 1.08711554680967 -1.57887312579949 0.77156456531736 0.722530349994521 -0.390589881491451 -0.388076745925362 -0.620023618991808 -0.0645227018856478 0.0843417700735265 0.317320882221459 -0.771945805128295 -0.0274301969343893 -0.135060830714597 -0.0584136555962724 -0.0492169781839357 0.0274301969343891 0.247658653899329 1.65725848273566 2.52063960740024 1.73871438560298 1.7043154842547 -1.78431108167549 -1.65533652192295 -0.224806920139861 -0.246680956901846 0.342700412650234 0.337696719354196 -0.499582312243069 -0.42090612179226 NA -0.30767429613501 NA -0.31636761375514 0.246087305083002 0.139908135494341 0.154197227505351 0.160123894198677 -0.00233033216971151 -0.0353473325538437 0.0981818460123969 0.0729045235808478
MMP1298 1.65163351630587 0.0721763319839892 -0.0638788440059987 -0.265633292582236 1.41745608247321 1.41235849634504 -1.16973669842854 1.04832319635220 1.06860326032461 -1.83825306496227 0.508971823561445 0.482190615520484 -0.72097429652121 -0.646734668098113 0.634322720107219 -0.840513513201628 -1.00862449080236 1.05319617248714 -1.75460836829992 0.956101747108068 0.89686399963814 -0.533693871831589 -0.482190615520484 -0.0914009902974021 -0.134329051283482 -0.322150617219916 -0.455893090561785 0.0773719501779534 -0.0801537082697402 -0.133853416773344 -0.0797169033200414 -0.0493043586972586 0.0493043586972586 0.323754368654922 1.25876266379468 2.69407642819577 1.75828584607490 1.78747798922076 -1.88371244887838 -1.93510557733143 -0.211137777928836 -0.226741204132863 0.221739578340534 0.240899838296554 -0.159427518510634 -0.150713070231782 -0.293191390106463 -0.284067424813423 -0.288609863330136 -0.283089118284562 0.278534539517847 0.000553379542654581 0.0127111182283859 0.0171695073448256 -0.0336399366357655 0.0118087118432713 0.0245076774546067 -0.091430674580494
MMP1317 -0.32899930497686 -0.464138224751211 -0.62444672695589 0.157041214199307 0.563085754720528 2.16006650614405 0.0927972536591943 0.348673993180950 0.887499074638102 0.527431060032812 1.93623221518646 2.00898758015888 0.262275426530608 0.00834108613962902 -0.00834108613962902 0.297369269811761 -0.0533707234348066 0.800494356469523 -1.15861315360157 -0.257425739594174 -0.212186616627386 -0.75229144273072 -1.23637287888592 0.110154723093363 0.0366264060158928 1.68499183973272 1.67323822774428 -0.0366264060158928 0.581847618969311 0.006068621820845 -0.006068621820845 0.0267907451115353 0.0617223243729847 -0.176212055554048 -2.70608727901461 -0.270053671027603 -1.22166162740917 -1.51686895326245 0.439184447140809 0.450361031061249 -0.129401125121842 -0.00380740007444526 -1.11802867655809 -0.785484252554977 0.577228000125022 -0.0539268442000408 -0.049142653832965 NA -0.0420387037614962 NA -2.24541174172015 0.157099772920565 -0.776063618667294 NA 0.845821648785826 2.02327961453881 -0.0625294276259064 -0.553118114858336
MMP1336 1.14760011560273 -1.13678089822287 -0.297783229462976 -1.92189867887505 0.0940920750476537 -0.20298569528792 0 0.627179079727041 0.884009258661212 0.201106938152335 0.378104264758414 0.540079927489593 -1.40731643283853 -1.63029426846527 -1.07552632583116 -0.378104264758414 -0.404587869298156 0.703928898319147 -1.40349700899441 0.926853564077849 1.05215790813570 0.645479791526797 1.09586518530264 -0.246337278025056 -0.0830924289538158 0.810741036404463 0.825268861397717 -0.566332227717216 2.13347487320664 -0.848598886280558 0.470032317251208 0.6830894371172 0.313596851046366 -0.522661418410609 -0.844969293097151 -0.313596851046365 0.0952532244901955 -0.543205242208927 0.396106148706199 0.163498215596970 0.0145767635757012 0.190807307091138 -0.704429031194638 -0.0317157816956650 -0.486807997924775 0.171943917094571 0.738639848809391 NA NA NA NA 0.120296302752101 NA NA NA NA -0.95977656450282 1.72116757760973
MMP1507 0.78296775956566 -1.10667909021832 0.976116522293978 -0.0937032561172343 -0.205649651565679 -0.290753687154216 -1.18032241240333 0.59892155306277 0.816051708143795 -0.385026350111712 0.85068942335834 0.808168140006864 -1.08606087702631 -1.08440467167386 0.878866055650981 -0.950923561018253 -1.07101112219890 1.02097395348326 -1.12690288852843 0.87747959784117 0.85588056936112 -0.80486966780041 -0.809480881634971 -0.101169077430537 -0.0608281669581259 -0.186187632622059 -0.200206013514676 -0.275437353346095 -0.502502888673029 0.0185993730149865 -0.0185993730149865 0.114884359380586 0.100152776455228 0.0726884685319704 -1.49863373682118 -2.60921918989551 -0.179975574021636 -0.00130082479271083 0.153993437589747 0.197412629343592 -0.0306995413526640 0.112126461252302 -0.638224772034133 -0.647461550521957 0.522447209957681 0.531344499802717 1.84560984150256 1.90305988303851 1.91090440569630 2.03619414511019 -1.57143239891793 0.777675151690987 0.940205615385885 0.979125620713226 -0.562767075353148 -0.470510273912581 -0.227566284646977 0.684585239838261
MMP1531 2.11030308310416 0.0599634969902087 0.905784167904203 -0.823512254941557 -0.186644911214350 -0.0224757946652723 -1.33077217843181 -0.124910010620370 -0.498424764251519 -1.35077563245062 -1.25715161603975 -1.69120682647988 -0.0729024557868944 0.0537935965943640 0.542143840650151 -0.0537935965943640 0.480232929917065 -0.172154793019880 1.00387208564706 -1.64030244556231 -1.66858199912935 -0.591358191092205 0.581420491179114 -0.145972294418292 -0.492283085932754 0.673710687951461 0.572263830416534 0.619273743022058 1.19308132254264 0.097904376462823 0.193997944483054 0.480105678412635 -0.097904376462823 -0.788184554779003 -1.63805731716898 -1.60280691281985 -0.163908797349716 0.0224757946652723 0.632252992196237 1.17958245271435 -0.393551334545441 -0.328210280711781 0.84055609875731 0.692228901049618 -1.58095026311921 -1.60863599398845 1.28339027898703 0.93056126013111 1.39405211514382 0.79206468036254 -1.46866835219050 -1.44265753440129 -1.46227258926249 -0.787075824010249 0.127253369507441 0.698293087090659 -1.23952088183205 0.77813241564055
MMP1621 0.778525391358217 -1.41900261128799 1.2603987476954 -0.0132126041764295 0.90892820926834 0.800070759729797 -0.95319460409295 0.65832150692992 0.630636091577668 -1.21342841804241 1.27753095540095 1.24798173857869 -0.918184059895157 -0.90011890907954 0.985408946148756 -0.860818440727883 -0.893895728169176 0.919247012819216 -1.05905399657216 0.824366354766214 0.927749598981204 -0.824366354766214 -0.824414173963266 -0.560273821937855 -0.780803448082499 1.17183869790626 1.40776104480701 0.59054421588699 -0.492063015836756 0.133764191168574 0.0176371084188352 0.0757006497937045 0.0703901744771659 -0.0176371084188352 -1.79471206037047 -2.44688063169426 -0.656098015586919 -0.69729093827543 0.643039922921252 0.636332686868256 0.166340257760187 0.348084402916897 -0.218473094540427 -0.0515433889591739 0.0975809121858821 0.231880169671524 1.50624497485924 1.96286285670111 1.59746848471870 2.11388550895663 -1.51656163291288 -0.398861678991999 -0.921861159624837 -0.787192450649673 0.579458782283382 0.707193328362535 -1.1150055892056 0.93773264130802
MMP1622 0.909278992573817 -1.40887220375277 1.46134189934156 -0.391202039011990 0.920005718216798 0.689876636755343 -1.22284413302209 0.397643836172662 0.605768387221536 -0.863381398290659 1.11316010403111 1.15391481263063 -1.18756912545080 -1.16848796285668 0.954521503689817 -0.874943560486712 -0.92979196298757 0.874281485099794 -0.868220927623304 0.989483471953228 0.960397745110657 -0.815831913538893 -0.836367514828436 -0.0183154439444865 0.0183154439444865 1.21146955327953 1.60406163430134 -0.272687760916841 -0.373107326477848 0.107899355441197 0.0558993475634966 0.107106269403408 0.102929349604386 -0.0558993475634966 -2.22665514159584 -2.05196472367218 -0.384394873889316 -0.302778926221590 0.142263898084053 0.343790831678909 0.00819373984536627 0.0936251454903127 -0.116430602832389 -0.282123065236073 0.0584805549282373 0.0219530180151275 1.36531283016818 1.68306828102289 1.36876704140179 1.67167767524857 -1.44181721366895 -0.453528377570177 0.308324745011656 0.366947912507216 -0.00819373984536626 0.602960021894178 -1.11206106659785 1.62525567079534
MMP1623 1.00063071943283 -1.40589212778926 1.54065525993296 -0.116960320626187 0.811582923134773 0.801291946633983 -1.41957269085382 0.861293471792322 0.84536709723925 -1.05988970072540 1.13578285552473 1.13431790246758 -1.10630761089249 -1.06441376029113 1.03666148438778 -0.916599745005911 -0.933013707270566 0.87232384489165 -0.943878455469583 0.885581420137148 0.924344816933623 -0.818711131073233 -0.877689923109487 0.0394509131358074 -0.0394509131358074 0.62134724919066 0.295963226181583 0.47930561818084 -0.411995059192018 0.111600918653374 0.00937577037659052 0.0489110385655634 0.0194135409603951 -0.00937577037659055 -1.82781336282547 -2.45366527965496 -0.476057359432199 -0.41705095444373 0.278997729847708 0.392139936149924 -0.0242531943094057 0.151200007138733 -0.313011379231714 -0.310080593051562 0.156871669669770 0.268639315914143 1.39133226013651 1.66415845481099 1.46903944702603 1.87045186773333 -1.58956347757501 -0.444841859554322 -0.414825610133764 -0.317214341925189 0.0242531943094057 0.368006851139953 -1.11092036362685 1.45612869333204
MMP1625 0.392890068812674 -0.950251917086924 1.38136832737505 0.304544616887649 0.803285626999807 0.577413180165779 -0.848723791316978 0.801251508079908 0.582303546348777 -1.01077316958816 1.04321619537150 1.07378125811518 -1.05595331028043 -1.06405598041521 1.11386119490033 -0.905298933800035 -0.874240502857112 1.00574344770619 -0.857929318577013 0.785740899017781 1.09802392044655 -0.796206064794686 -0.785740899017781 0.383963477543857 0.407681063121994 1.0156902332304 1.26827297822181 0.125451492197382 -0.38187376758951 0.252177556436729 0.112027501626021 0.173345292786783 0.085087432396083 -0.0850874323960829 -1.96989830647181 -2.20800601759189 -0.457275296468894 -0.357585624240742 0.248344052368215 0.221032247446041 -0.00322460831021679 0.0276877133614525 -0.0992298667920638 -0.00570888601064015 0.129441782325276 0.0269755115235988 1.09288668742301 1.43465662807005 1.19103773364519 2.01645587659117 -1.4493222009912 -0.105670167058484 -0.081699321455905 NA 0.00322460831021679 NA NA 1.59475899978143
MMP1626 0.737152458274243 -1.07387698624424 1.65214957209472 -0.422466224325324 1.26375728286276 1.17898394925387 -1.10092630480158 0.928650474306235 0.819374426903886 -1.17070609892027 1.29610956120113 1.25452953280095 -0.989552414744829 -1.00690728510698 1.16140225768729 -0.825367661862833 -0.806628563228165 1.06812107990361 -0.848725722389506 0.757277138483437 0.787508939277384 -0.82702526794367 -0.757277138483437 -0.160740025792663 -0.122227880851868 1.14870310199314 0.895703326457124 0.422539410928393 -0.332249829492311 0.109533904768200 0.0104920998787046 0.130397505676429 0.096509229056705 -0.0104920998787046 -1.86750332927253 -2.36639061862001 -0.568136585670657 -0.196235608065366 0.782452069389951 0.846785136713227 0.238856486720804 0.272282211539542 0.100826381505852 0.0161362613576969 0.126815512478632 0.0252962039305550 1.72901098143993 1.74550404698728 1.79794498873117 1.66081273118766 -1.77186118634431 -0.0426271315692634 -0.175656496940311 -0.0161362613576969 -0.526498841505556 0.0297122000527181 -1.31736786131998 1.25773110097623
MMP1629 0.583383017392388 -1.17494528563265 1.9063645568421 0.561405771568044 0.740076283348674 0.761965782755668 -1.41215146743154 1.11167058686873 1.12078577672932 -0.74990430891072 0.184584693186772 0.318353942891659 -1.31342548097795 -1.38456473120364 0.87144557829315 -1.80418222265384 -1.48448179741453 0.647317440714698 -1.73745215682947 0.304735702047173 0.465606665776369 -0.184584693186772 -0.467465379847208 -0.224477140810333 -0.227055130281379 1.04246954001366 1.29165393456685 0.0107088925612991 -0.173059123930622 0.0763829782242947 0.0988693203286086 0.15500954887828 0.0586107011127014 -0.0586107011127014 -2.0539710560261 -2.18891431755569 -0.366110011897776 -0.249771958433918 0.477101225689425 0.462439103979286 0.0390985073688299 0.0720051198492194 -0.256134267923104 -0.176241454870699 0.267191097275420 0.346957028001150 1.72414230806472 1.62166633031837 1.54972035546608 1.68092786312330 -1.50963245652436 -0.177692165447916 -0.326465589499175 -0.271420450908426 -0.116879523330995 -0.114540145885572 -1.39509375700830 1.23863817061891
[+] Show/hide bicluster #29 motif PSSM #1. bicluster 29 motif PSSM #1 Methanococcus maripaludis S2 15x4
POSITION A C G T
1 0 0.076923 0 0.923077
2 0 0.076923 0.307692 0.615385
3 0.076923 0 0 0.923077
4 0.769231 0 0.230769 0
5 0.923077 0 0 0.076923
6 1 0 0 0
7 0 0.461538 0 0.538462
8 0.153846 0.538462 0 0.307692
9 0.076923 0 0.923077 0
10 0.923077 0 0.076923 0
11 0.230769 0.076923 0.153846 0.538462
12 0 0 0 1
13 0.076923 0.076923 0 0.846154
14 0 0 0 1
15 0.230769 0 0 0.769231 [+] Show/hide bicluster #29 motif PSSM #2. bicluster 29 motif PSSM #2 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0 0.1 0 0.9
2 0 0.5 0 0.5
3 0 0.5 0.4 0.1
4 0 1 0 0
5 0 0.8 0 0.2
6 0 1 0 0
7 0.1 0.9 0 0 |