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bicluster 26
Methanococcus maripaludis S2
15x58
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bicluster 26 genes
Methanococcus maripaludis S2
15
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bicluster 26 short names
Methanococcus maripaludis S2
15
short_name
[+] Show/hide bicluster #26 rows (long gene names).
bicluster 26 long names
Methanococcus maripaludis S2
15
long_name
[+] Show/hide bicluster #26 rows (NCBI RefSeq gene IDs).
bicluster 26 NCBI RefSeq IDs
Methanococcus maripaludis S2
30
[+] Show/hide bicluster #26 gene upstream sequences.
bicluster 26 upstream sequences
Methanococcus maripaludis S2
15
upstream
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bicluster 26 arrays
Methanococcus maripaludis S2
58
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bicluster 26 ratios
Methanococcus maripaludis S2
15x58
GENES H_vs_Leu_3000070033A.4 H_vs_Leu_3000070033B.4 H_vs_Leu_3000070239A.3 H_vs_Leu_3000070239B.3 H_vs_Leu_3000070240A.3 H_vs_Leu_3000070258A.2 H_vs_Leu_3000070261B.1 H_vs_PO4_3000070034A.4 H_vs_PO4_3000070035A.4 H_vs_PO4_3000070035B.4 H_vs_PO4_3000070248A.3 H_vs_PO4_3000070248B.3 H_vs_PO4_3000070249A.2 H_vs_PO4_3000070249B.2 H_vs_PO4_3000070250A.2 H_vs_PO4_3000070250B.2 H_vs_PO4_3000070253B.1 S2_vs_S40_BR1_3000069792A S2_vs_S40_BR1_3000069793A S2_vs_S40_BR2_3000070262A S2_vs_S40_BR2_3000070262B S2_vs_S40_BR2_3000070263B S2_vs_S40_BR3_3000070265B S2_vs_S40_BR3_3000070266A leu_vs_PO4_BR2_3000070244B leu_vs_PO4_BR3_3000070251A leu_vs_PO4_BR3_3000070251B leu_vs_PO4_BR3_3000070252A leu_vs_PO4_BR3_3000070252B leu_vs_PO4_BR4_3000070256A leu_vs_PO4_BR4_3000070256B leu_vs_PO4_BR4_3000070257A leu_vs_PO4_BR4_3000070257B mma_0334m_0.402 mma_0649m_0.885 mma_0783m_1.23 mma_0849m_1.4 mma_0912m_1.56 mma_1444m_1.58 rapid_H_vs_slow_H_3000070041A.1 rapid_H_vs_slow_H_3000070041B.1 rapid_PO4_vs_slow_PO4_3000069786A.2 rapid_PO4_vs_slow_PO4_3000069786B.2 rapid_PO4_vs_slow_PO4_3000069786Blow.2 rapid_PO4_vs_slow_PO4_3000069787A.2 rapid_PO4_vs_slow_PO4_3000069787Alow.2 rapid_PO4_vs_slow_PO4_3000069787B.2 rapid_PO4_vs_slow_PO4_3000069787Blow.2 rapid_PO4_vs_slow_PO4_3000069789A.3 rapid_PO4_vs_slow_PO4_3000069789Alow.3 rapid_PO4_vs_slow_PO4_3000069789B.3 rapid_PO4_vs_slow_PO4_3000069790B.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023A.1 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070023Blow.1 rapid_PO4_vs_slow_PO4_3000070024A.1 rapid_PO4_vs_slow_PO4_3000070024Blow.1
MMP0107 -1.77767079919759 -1.72084948116853 1.04615520447786 0.74697674236407 -1.10663514643562 -0.265501654420944 -1.07728121535376 -0.0946422782544135 -0.45208117624577 -0.361800897869093 0 -0.145458058867173 0.744826360543925 -0.194871573131095 0.789544088770092 0.235682959556140 0.179348516209832 1.16369004687163 -1.52638109793785 0.424617396098774 0.750523782442497 -0.0576228452696163 -0.137858023047546 0.623548800002783 0.73434923187502 0.377133006910952 -0.385834325681064 1.34555064896704 -0.465471342999414 -0.473420862982307 -0.284637260878804 0.799989801144863 0.362043906943014 0.779991179685948 -0.497162606884186 -1.39798123127728 0.85464253087444 0.0746513511884926 0.827706476321892 -1.37379863471430 -1.40415243737670 1.24296577119191 NA NA -1.23302252833513 NA -1.35126375938953 NA -0.302742906076094 NA NA 1.15021094412229 NA -1.62243069974605 -2.49687129783647 -2.06148045468251 0.668735910022317 0.932972649918863
MMP0584 -1.11827055317674 -2.06720346512478 1.00204588406401 1.3131473295613 -0.888974579541244 1.82420024733323 -0.438721089163771 0.311767305840398 -0.309901726332596 -0.943296689412037 0.867002971146131 0.228237056093735 0.7748620073114 0.692723563281902 1.14704537682158 0.0391372924146185 0.744529084666031 1.02507145356235 -1.46652290623878 0.925605550432314 0.70369575412126 -0.350462459226107 0.714607428168309 0.118096761155383 0.468056423871563 -0.365053324451850 -0.458529425844967 1.10087111358486 0.766536549155818 -0.725625902996633 -0.509516648411431 0.939581671768883 0.473272942194578 -0.569945422692988 0.0748128017213696 0.195772832371015 0.262224842027732 -0.841834037366877 -1.72178025674275 -0.479065759312927 -0.515593430324727 -0.940588758850035 -1.14392322300350 -0.327599516789074 0.0181470766763572 0.390174308334766 -0.705184113675408 0.35739725200751 0.0384322840280879 -0.0904965971153337 -1.21936857331288 -1.27076226140341 -1.01259875954042 -0.583747852691213 -1.21062002787473 -0.75499508538838 0.656995174368 0.214013698396545
MMP0946 -1.68153586419675 -1.88298622473557 0.932288669298068 0.960510222247526 -1.07861747961115 0.717840484564417 -1.2295326431762 0.257644156591272 -0.792439196029187 -0.80758519102171 -0.0868432071942577 -0.441069236102617 0.518059541766451 0.281849302349693 -0.144497838023653 -0.174466301038023 0.711509711773752 -0.556125075134087 -1.83518811293106 0.856466649049019 0.633355665147 0.178216845449521 -0.77388547619653 0.770100587676219 0.67804400585959 -0.672106188959944 -0.550668499042636 0.856497275905065 0.746662591593853 -1.14732358980439 -0.83950410976403 1.10873506456239 1.11902552533893 -0.52999294143648 -0.0209017723928054 0.134151375539278 0.0209017723928054 0.160753631311940 -2.64791253316565 -1.66756804968447 -1.64690398090873 0.894047109051958 0.867024743549249 1.00228251292780 -0.578171822384842 -0.74360666281408 -0.757830357073274 -0.841765834045904 -0.425825339842973 -0.562818177679285 -0.395302843391574 0.174829605854038 0.201769646557499 -0.847108655386325 -1.12398586728849 -0.698942403173014 1.08841843760495 0.676246419729234
MMP1255 -2.18743682631600 -2.85459408794037 1.28568285715011 1.14331058691544 -1.17832133724303 1.04612443330217 -0.895481382702776 0.926245534593397 -0.153514278317387 -0.39542338932477 0.132932098076435 0.0886246843221514 0.411645327866262 0.242701165701556 0.207994101936058 -0.469451753336677 -0.465404288758833 1.59628770402821 -0.994069617856101 1.15824473524031 1.12910144557483 -0.774138038059783 0.0785658765180417 -0.371022093952971 0.493261379849442 -0.493261379849442 -0.565902560443178 0.615112579838885 0.504097725843715 -0.801023140617582 -1.17145804005020 0.890192684189644 0.79916525950637 -0.359504372343572 0.0977469107669415 0.275066481512401 0.185562317231359 -2.20877459858511 -1.58377337235667 -0.946985030480616 -0.829397372777444 0.56696574485656 0.631930978781267 0.267509841478856 -1.32588918083523 -1.58258110691762 -1.52768180017753 -2.26253031010509 -0.443047228503221 -0.63840217460874 -0.878338412928198 -0.114494117965165 -0.0779253784979047 -0.577375271425014 -1.18038528352842 -1.13433832964256 0.619613045257459 -0.081929211668126
MMP1364 -2.82769956617855 -2.92688242691598 0.973509964129952 1.02733235013959 -0.876435379159227 0.720533369009189 -0.713325696622488 -0.0512999147388654 0.305206075175265 0.220542358838993 0.0653480108674723 0.0374787943747066 -0.269340221464574 -0.156598995278258 -0.131218244305525 -0.0883633228659654 0.424485844689012 0.530833554743504 -2.10846955507435 -0.337436972424914 0.0368152541218445 -0.505794330454483 -0.560326540082387 0.587539767445116 0.700052405632652 -0.52709965198606 -0.543420453123317 0.527099651986061 0.699206288162933 -0.697362021485031 -0.63688269047401 0.667077097473215 0.625858400517238 -0.168309868555580 0.0291852881846163 0.0667482816828332 0.0714758159672834 -0.175256449544977 -2.74635973824527 -0.0763646010882373 -0.0693310420346808 0.700291454296534 1.08137312988389 0.736364284964608 -0.322442856855279 -0.573761334113074 -0.3292318048735 -0.608719595915039 -0.463659374534493 -0.737397085950319 -0.483824546124992 0.293406713186426 0.229883607300870 -0.628659815705931 -1.16316932484581 -1.04870842414227 1.11331877910835 0.823376439269636
MMP1366 -1.41418561896270 -1.19686197182425 1.24266873542079 1.33035101944439 -1.51425494407491 0.0749717646956346 -0.879235842149072 0.130262961320762 -0.353720485221794 -0.208099730266343 0.223690607326842 -0.08692525489791 -0.0574689541841316 0.040861805616801 -0.520974849222452 0.0176038336997823 0.191439977770912 1.20674803911975 -1.24182079659505 -0.371194330943968 -0.304762791407031 0.0698138974376204 -1.07327440654160 -0.146186042469030 1.25376611863644 -0.444083670987098 -0.53606286923102 0.47319196102941 0.444083670987098 -0.81391145503502 -0.752498013873174 0.800280199076703 0.676322981772783 -0.374163413848431 0.0600786153441489 0.111084403000412 0.125666911502396 -1.22050977267515 -2.65249891072976 -1.71429745585655 -1.52140366225713 1.20321936955172 1.03775934259986 1.17834649495594 -0.852228760306454 -0.792016927992613 -0.587970584476358 -0.633694930152673 -0.341369041663966 -0.141634662122109 -0.277329143645611 0.864492334983812 0.901805376744418 -1.82866206388796 -0.650561468267095 -0.439820151616393 0.454017037885353 1.50396749048290
MMP1409 -1.73331770495970 -1.6420571916715 1.88989111286364 1.9995035254549 -1.72509580598257 0.669788041427888 -1.46925952280941 0.189732449574591 -0.420982256321377 -0.517190673497494 -0.0567438701700499 -0.100977938743153 0.419710572366971 0.324459067237581 0.182128627972028 -0.0260395133209390 0.400428520535289 1.22618358463963 -1.50702404392590 -0.0143868524056401 0.229127313831731 -0.0658312098806748 -1.27318329772781 0.904720191374179 0.716076487730882 -0.174898234095431 -0.169699806893144 0.325693766398921 0.326623996688745 -1.51777421018450 -1.60781524957097 0.948104482593993 0.835314593567674 -0.395884125249182 0.0497450831847717 0.0516562352539318 0.106895880637539 -1.77816161219360 -2.42817383325445 -1.03544311067848 -1.13467176770591 NA 1.10284674959517 0.691346537930934 -1.16480828431838 -1.31485038689748 -1.28113812612390 -1.53578768206114 -0.462707965397225 -0.332193367119047 -0.653367514571801 0.0201871598697556 0 -0.655586432489852 -1.16444659907400 -1.06567966158591 1.07171834095856 0.574495067351196
MMP1411 -1.94281118532204 -1.71122202331186 1.73772394650869 1.79020688976916 -2.27966765489292 0.212752697120292 -1.91262779821379 0.245330664146423 -0.850633877868026 -0.77324401658719 0.06065080050459 -0.150719203680753 0.234568650449521 0.317256679033823 0.0801160951787186 0.0377375609287949 0.491582847968582 1.29255156130883 -1.91492524316944 -0.0359909936763927 0.0940145244366254 0.0266990744195969 -0.220397503226842 0.436673703048327 1.04477765700081 -0.353043733270978 -0.238445544871959 0.272269380019848 0.238445544871959 -1.16885587466728 -1.06300756642996 1.01784418523439 0.987020619147765 -0.418416162661173 0.0784767521345725 0.151215659233986 0.148268594857950 -1.41952500070221 -2.56186966634020 -1.47900327454878 -1.37753168891407 0.808706102541267 0.853875450597147 0.847812018253964 -1.18387520019341 -1.09426897490975 -1.14671551380035 -1.11726050134926 -0.712589518193634 -0.666019268806848 -0.620343955132725 0.205956357624514 0.228969565199290 -1.12698406739150 -1.10096105458832 -1.13647333028209 0.767996161691158 0.692385971779959
MMP1412 -2.06454893420542 -1.89502382959585 1.64712201360370 1.78336236165792 -1.87350278989658 0.970796940870809 -1.46028802416151 0.304307980538831 -0.43858562949839 -0.574937786907521 -0.518416826837853 -0.401032329078003 0.226403811627871 0.140706259861652 0 -0.227747600161928 0.339460752880465 0.941548783593031 -1.09800429724050 0.443052209452790 0.418301385601679 -0.000850952153277428 -0.385582414821148 1.84610901633110 0.8650478762927 -0.345022403629437 -0.316548831821005 0.316548831821005 0.356455337134496 -0.900217671952472 -1.05972213232150 1.33653051654523 1.14800162391010 -0.461948180235152 0.0608232165855534 0.105830025583362 0.0831606317994291 -1.21876446894647 -2.64665172427422 -0.97104636758127 -0.995423569585518 NA 1.02552694949772 0.598300130231163 -1.46401660320998 -1.58073380560226 -1.54961237450346 -1.74693087603346 -0.617892328880709 -0.470926679562383 -0.88500680786366 -0.198829204537007 -0.172993636276843 -0.400906313931167 -0.88963138492635 -0.927704208381201 1.22007512529324 0.464001093774087
MMP1415 -1.92752804796541 -1.9053935847961 1.70772166250818 1.72885166828459 -2.1914023659349 0.507360024614788 -1.72803496219896 0.455541907438464 -0.814346823626173 -0.77582591745355 0 -0.0400251983154325 0.170749125754699 0.282515932961342 0.159450453338572 0.0740139234030879 0.672419793557095 0.39536638920453 -2.61237485404868 -0.330000931817974 0.0280085144355421 -0.438496899355429 0.395601075169188 0.128626350250298 0.737462953898948 -0.447725452148597 -0.468632980606114 0.462308256971446 0.447725452148597 -1.16034887990271 -1.00339962620491 0.705929374843916 0.800174415077291 -0.460976132504729 0.092700482727774 0.167225776184925 0.166991861265097 -0.582565107831242 -2.75909665384535 -1.51392902851948 -1.43310366969890 NA 0.91261717699532 0.73778438376557 -1.04085320351972 -1.10984247079687 -1.05039318833843 -1.15574898632065 -0.530290517286468 -0.499832564454952 -0.667334193850777 0.195374322627010 0.258876251853822 -0.675294730893439 -0.797952510632981 -0.805242936553384 0.933264970209234 0.732609562167699
MMP1418 -1.23690718044021 -1.47753775113993 2.51594825169198 2.43889499327649 -1.92256684624055 0.904113277241031 -1.47956787263242 0.567447881235034 -0.111271558187908 -0.202470437148983 -0.0853721436536024 0.0119643382580101 0.372505642215761 0.070521024909935 0.565472335233883 -0.0853837222303196 -0.0627340884036701 2.10736854340347 -1.26468123975488 0.936748337336675 0.542774582619506 -0.576776226177734 0.248526333629097 -0.46615005841608 1.17850475121436 -0.198225404396259 -0.416331603363237 0.252071901797297 0.198225404396259 -0.925023194777763 -0.842211109218715 1.05091466891139 0.852663612909426 -0.497821333908971 0.085318811691313 0.166311972898743 0.219812042687137 -0.228410268188843 -2.68033757375873 -0.623317251613626 -0.76818031290455 1.07715514437243 1.03801151415999 1.09245068271035 -0.87683909925618 -0.902841952498664 -1.28540977206008 -1.36665434275025 -0.336584188628856 -0.400331347012185 -0.565153108689847 -0.0119643382580101 -0.0281643967977848 -0.538774631579 -0.61824974532756 -0.701877710800305 1.06570988939298 0.818217874998915
MMP1420 -2.13491273020500 -2.07408049547193 1.89853078707754 1.99123621931984 -2.31424969017264 0.533110268018546 -1.4746751657746 0.277447125682499 -0.584416466031634 -0.559693502104409 0.06006202957327 -0.039819435556491 0.270644155906916 0.176493869715514 0.232407013316293 0.178788275753766 0.197659601626472 1.34166549779084 -1.28909813279448 1.08641873906457 1.04449710138669 -0.94821095083347 0.279536157701195 -0.319096763677924 1.10389123729230 -0.438428786326004 -0.477692377599935 0.438428786326004 0.448824516721766 -0.73658884215778 -0.707832596197416 0.859585465751629 0.94507374292181 -0.655438559532345 -0.0573450250784625 0.0573450250784625 0.121864677047975 0.113494279008417 -2.70629005932392 -1.36790858963873 -1.28123137616294 0.796592108957456 0.734281862805026 0.703324084738407 -0.870095264197825 -0.864839735877096 -0.935768062786298 -0.957997019023235 -0.439517951047259 -0.459984996804423 -0.487964070593307 0.0909962365696379 0.0836262419040922 -0.912383497762326 -0.95745484699306 -0.891763992493628 0.856920048887531 0.786499160976415
MMP1545 -1.78483278850386 -1.8063698087521 0.833012210697099 0.741866559023692 -1.06777464577287 0.373880160668036 -0.926937860191601 1.57861485232635 -0.0994144986668184 -0.399894630799114 -0.455871253827684 -0.483346287992317 0.197730522958705 -0.00441537848275208 0.296989102376889 0.00441537848275208 0.786253592330666 1.31659129326579 -1.85772436159900 0.643926316318513 0.417553860640246 -0.716080392209402 0.00212729434361964 0.809539529295121 1.04476401268975 -0.373189020328444 -0.597725541137515 0.345380567788859 0.476279684111249 -0.345380567788859 -0.748821780149032 0.762019493841233 0.681752271975947 -0.294272799326619 0.082146100621803 0.110390675528606 0.0274989883021199 -1.08199235684646 -2.70859918005064 -1.30166432485233 -1.18193623959457 0.581652399093998 0.749748746880075 0.387962153176001 -0.982015599793569 -0.930828415170102 -1.01679270977119 -1.22051046061559 0.0627001115714425 0.968129561570297 -0.162070375944827 -0.358005857023596 0.324692965053748 -0.62897245716186 -0.990985890104397 -1.03511389227060 0.855321376427831 0.346698346032979
MMP1546 -2.15275256617405 -1.44974881779854 1.97432511991631 2.01323515441198 -1.86558192292615 0.840342057965995 -1.3816210464283 0.814990560451029 -0.880720955692494 -0.81435077610277 -0.174956941949150 -0.0193730577258116 0.219987780379067 0.315042520908071 0.0193730577258116 0.107916850121019 0.318800975204169 1.28232824637909 -1.94951776079190 -0.128762064437445 0.00956298508009822 -0.732583987811356 0.833652266689488 -0.00956298508009822 0.884864522696797 -0.644187170396784 -0.606585061952941 0.674459889559865 0.606585061952941 -0.836761521702313 -0.77535590235531 0.865267578671786 0.861063562333338 -0.293948830053544 0.0513619372172878 0.0874018957575636 0.0850036730081183 -0.86542532605679 -2.74276741778233 -1.52386771670306 -1.44521947421593 NA NA 0.467053766500175 NA -0.154203792933568 NA -0.094734189571496 0.466668298958034 0.398727787644028 0.619852742629821 -0.43631113986286 -0.429830693047224 -0.312006154846293 -0.366118544099869 -0.206771641656007 0.533796405302482 0.450307186511199
MMP1547 -1.78197252234985 -1.56902285736378 1.34040018319088 1.38176851086622 -1.65478138795376 0.432841985992953 -1.17913537986760 0.790244945545913 -1.01065053179608 -0.901982445146873 -0.637043941183255 -0.757429716077487 0.371428117892286 0.0916259053435236 0.0255373984357820 0.110091065144566 0.5404097538114 1.29582542154345 -1.77904202163301 0.591895240681981 0.57047468311855 -0.465513742057685 0.855457516959315 -0.169204263394205 0.0417248839396016 -0.795919804036584 -0.72799700488876 0.51173917722739 0.531030833009401 -0.0952249884828603 -0.0417248839396016 1.60879651425046 1.79997354510137 -0.386390066031946 0.0743044427243554 0.166227464651393 0.0844368667322221 -0.479183571121171 -2.76702223730978 -2.15620955125551 -2.13706788541861 0.0515248094674819 0.0319509684955423 0.0908737233578787 -1.15210434411599 NA -0.60319854614496 -0.635759834959131 -0.0467644068736458 -0.133900772785523 0.127611729743882 0 0.0144201707237530 -0.95516112409372 -0.90427064627736 -0.849743142610995 0.592385857633195 0.58161997184917
[+] Show/hide bicluster #26 motif PSSM #1. bicluster 26 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0.428571 0 0 0.571429
2 0 0 0.857143 0.142857
3 0 0.285714 0.714286 0
4 1 0 0 0
5 0 0 1 0
6 0 0 1 0 [+] Show/hide bicluster #26 motif PSSM #2. bicluster 26 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 0 0.5 0.5 0
3 0 1 0 0
4 0 0 1 0
5 0.5 0.5 0 0
6 0 0 1 0 |