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bicluster 10
Methanococcus maripaludis S2
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bicluster 10 genes
Methanococcus maripaludis S2
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bicluster 10 short names
Methanococcus maripaludis S2
12
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bicluster 10 long names
Methanococcus maripaludis S2
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long_name
[+] Show/hide bicluster #10 rows (NCBI RefSeq gene IDs).
bicluster 10 NCBI RefSeq IDs
Methanococcus maripaludis S2
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bicluster 10 upstream sequences
Methanococcus maripaludis S2
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upstream
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bicluster 10 arrays
Methanococcus maripaludis S2
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bicluster 10 ratios
Methanococcus maripaludis S2
12x56
GENES H_vs_Leu_3000070032A.4 H_vs_Leu_3000070032B.4 H_vs_Leu_3000070033A.4 H_vs_Leu_3000070033B.4 H_vs_Leu_3000070239B.3 H_vs_Leu_3000070240A.3 H_vs_Leu_3000070240B.3 H_vs_Leu_3000070259A.2 H_vs_Leu_3000070259B.2 H_vs_Leu_3000070260A.1 H_vs_Leu_3000070260B.1 H_vs_Leu_3000070261A.1 H_vs_Leu_3000070261B.1 H_vs_PO4_3000070034A.4 H_vs_PO4_3000070034B.4 H_vs_PO4_3000070035B.4 H_vs_PO4_3000070248A.3 H_vs_PO4_3000070248B.3 H_vs_PO4_3000070253A.1 H_vs_PO4_3000070253B.1 H_vs_PO4_3000070254A.1 H_vs_PO4_3000070254B.1 S2_vs_S40_BR1_3000069792B S2_vs_S40_BR1_3000069793A S2_vs_S40_BR1_3000069793B S2_vs_S40_BR2_3000070262A S2_vs_S40_BR2_3000070262B S2_vs_S40_BR2_3000070263A S2_vs_S40_BR2_3000070263B S2_vs_S40_BR4_3000070272B leu_vs_PO4_BR1_3000070030A leu_vs_PO4_BR1_3000070030B leu_vs_PO4_BR1_3000070031A leu_vs_PO4_BR1_3000070031B leu_vs_PO4_BR2_3000070243A leu_vs_PO4_BR2_3000070243B leu_vs_PO4_BR2_3000070244B leu_vs_PO4_BR3_3000070251A leu_vs_PO4_BR3_3000070252A leu_vs_PO4_BR3_3000070252B leu_vs_PO4_BR4_3000070256A leu_vs_PO4_BR4_3000070256B mma_0070m_0.2 mma_0334m_0.402 mma_0492m_0.598 mma_0649m_0.885 mma_0783m_1.23 rapid_H_vs_slow_H_3000070036A.3 rapid_H_vs_slow_H_3000070037A.3 rapid_H_vs_slow_H_3000070037B.3 rapid_H_vs_slow_H_3000070042A.1 rapid_H_vs_slow_H_3000070042B.1 rapid_PO4_vs_slow_PO4_3000069790A.3 rapid_PO4_vs_slow_PO4_3000069790Blow.3 rapid_PO4_vs_slow_PO4_3000070023Alow.1 rapid_PO4_vs_slow_PO4_3000070024A.1
MMP0145 1.63131125417118 1.81058802340542 -2.06037368031037 -1.13396846815672 0.456329574086315 -0.84571395255652 -0.621348001683071 -0.336610616836777 0.00774949360473242 0.303944524832968 0.768722756496668 -1.32569504008589 -1.61872025938111 0.636086810540229 0.407161239940694 -0.993312112628282 -1.43068884804799 -1.20065388496179 0.216720167000051 0.181356273190997 0.00317690096593025 -0.312316548335493 0.973557516563218 -0.226616044551993 -0.0412397038281452 0.264909455266714 0.288015045144906 0.0412397038281452 -0.167094196542516 0.711506799037425 -0.543879832375978 -0.528180160724619 1.30848113595542 1.32114969451267 -0.702755607150835 -1.00906461010265 0.528180160724619 -0.637974102149736 0.548792601587463 0.57958389559481 -1.28286384037368 -0.922612138516122 0.0686043529328952 -0.284775198474478 -0.0106774715189129 0.0106774715189129 0.0563284575339056 0.128895621897169 -0.586714336069476 -0.289092851985516 0.601453793046767 0.86244106085431 0.767462625280477 1.24246477687448 -1.05433103963410 0.65745792380542
MMP0596 1.9712220682675 2.03633399041252 -1.64770052878765 -1.52380345405089 2.25769338322358 -1.85107110449526 -1.57283666110095 -0.585748549528228 -0.59562833247262 1.36563609558879 1.20139503576511 -1.83179225645870 -1.60334888784598 0.472058388912616 0.756934023771368 -0.394524816827254 -0.582503340903811 -0.721622667320108 0.36307589523564 0.236935143635032 -0.829258335027422 -0.628896589481466 1.84193788947888 -1.10067777633376 -0.937593433711835 0.381607179219052 0.455121065047396 -1.12027629464287 -0.83117676231507 0.554019480696699 -1.05436642449213 -0.971029834892136 1.08582344481752 1.16911780927277 -1.07277892304611 -1.13015633643314 0.673408951918342 -0.333236758887702 0.333236758887702 0.38207790800916 -1.35196784841785 -1.33618273878446 0.673565822659411 -0.249330712907674 -0.00572117185938526 0.04725074973153 0.100120507539242 -0.856076821308551 0.75601400708934 1.01256714187050 0.424391789879288 0.711923254180503 -1.08114088987155 -1.07208368899014 0.166643877739948 -0.325694857433056
MMP0617 0.643278897090759 0.472922453848073 -0.895476842740954 -1.03305111833999 2.07251105714985 -1.28259195614501 -1.07211041268789 -0.382439485621764 -1.03775116402361 0.677011116924491 1.00930241654668 -1.46849280071273 -1.47951754035083 0.842228848359255 0.117979864664223 -1.27669662559700 -0.986372575746406 -1.32645097112422 1.54381879253842 1.48605957615605 -1.89383300353281 -1.95431276577993 1.3707404032465 -1.31321259940946 -1.24523703430971 0.731470132012652 0.905632449589475 -0.606634743436724 -0.502309005185287 0.423076597344797 0.254989954090064 0.532091576184135 -0.365126045140312 -0.334009813480531 0.916457392923799 0.526858846238421 -0.254989954090064 2.43766075472775 -0.592124545926758 -0.875885707905258 1.26311719572700 0.873798945783971 -0.000375364784394392 0.352384118149927 0.283066754631738 0.000375364784394577 -0.819337909936717 0.116859826448211 -0.174783299574625 0.359516857547209 0.241864677999407 0.167919058383570 -0.783670547924225 NA 0.597523001102333 -0.895269476010151
MMP0880 1.27962008481066 1.42821473685696 -1.56004670441146 -1.22767353024689 1.38348113399333 -1.71044484356415 -1.16172862370766 -0.779400610974415 -0.694891002902762 0.959749060964008 0.866375727853797 -1.40746460636561 -1.55134492431980 0.109338694592512 0.677858508170512 -1.28834790487575 -0.0375919931422795 -0.0922615974393942 0.587859388860314 0.72836275306213 -0.672798106000946 -0.775436673515908 1.20821311527135 -1.26287610531108 -0.948557069698878 0.824687869080089 0.716146270269556 -0.6479182232887 -0.477089856562415 1.00550476057846 -1.33207654473847 -1.4169650629651 1.50349286931578 1.56650311134382 -0.80671462085451 -0.6068334590586 0.864989729280422 -0.263398385417785 0.0651582543158444 0.222813490915851 -1.08419226467318 -0.831219292599651 0.558896214967826 -0.582003464783569 -0.0974715885512994 0.0974715885512994 0.194499872549779 -1.41745491265401 0.621705630453795 0.975718216467102 1.20796634781716 0.473925303092474 0.6863093323971 0.879375454771747 -0.79701582517948 0.670838967080242
MMP0893 2.07367124008447 2.28149508182889 -2.00599821760373 -1.960745897447 1.56101993163239 -1.59737498997435 -1.58321052170511 -1.04402503809832 -1.3110216127766 1.83891245708411 1.97426807695831 -2.02333835200767 -2.01543080375532 -0.602563006939814 -0.345421264837407 -0.040552434506828 0.558893596900034 0.455542830949927 -0.154275309562461 0.202081923763767 0.0381741671028282 0.364374009653582 1.05309955649170 -1.17582409975062 -1.17449732149932 0.432484001607532 0.48549632411077 -0.504120252792635 -0.687232562047638 1.10999244329804 -0.962199506339405 -0.971581972046895 1.29233233056368 1.33184382245295 -0.485240060149203 -0.631349309949111 0.525109270081181 -0.455241650129094 1.39852843787905 1.25022136397589 -0.770099073588444 -0.807209881694258 0.539493684011935 -0.116812277347081 0.0071998192974648 0.0404339661686522 0.0311262149856178 -1.23385498485148 1.04838574962796 1.30367360797048 -0.228520765306431 -0.369911058827342 0.00614423774696038 -0.263108269469421 -0.557406472041958 0.00682713136114674
MMP1399 2.3626257557538 2.22628983338057 -1.90178528974562 -2.25902198303679 0.0553549015748208 -1.00571513069372 -0.84943326232257 -0.120318839689278 -0.384564186125902 2.14095079120752 2.66358632235403 -1.67624029810183 -1.28977975172213 0.599200886851102 1.01039005155765 -0.607058034374934 -0.0692492362034859 0.635662017462916 0.244295727699422 0 0.568550170743184 0.940351846951007 1.05064455677861 -0.739880163151578 -0.752605133409278 1.35656120063652 1.56513566040146 -0.760771879789981 -0.736599164838224 0.324897026752669 -1.30052402180535 -1.05444592090577 0.820531655366798 0.6881936499171 -0.93729666624934 -1.01840677318959 0.769808760377632 -0.156050265030925 0.156050265030925 0.710678481972115 -1.32988619631118 -1.30230315686454 0.0124280247199969 0.647322544701553 0.331437664961289 0.118527847186713 -0.0124280247199970 -0.720011907892689 0.762746907748512 0.736418803846311 0.314466029003413 0.937377099581143 -0.268025993385318 -0.785508423681617 -0.802063939849446 1.04368403888591
MMP1403 1.59786416912289 1.71803024502542 -2.15272218377422 -2.07760602021169 0.894982956067727 -1.39296858662288 -0.915224809384415 -0.589792625406071 -0.632179656779824 2.09208996451408 2.02033214407805 -1.78321917098154 -1.81846219207663 0.83622614353321 0.924477654794165 -0.940911648953786 -1.78654889970782 -1.55724131215576 0.0341491083021623 0.441251464888162 -0.641406881464371 -0.68944650333262 0.819637818847852 -0.952358540170346 -1.08770506299439 1.43081184763103 1.52009551276789 -0.563919844831348 -0.456431973745786 -0.529915714524242 -1.09060869975967 -1.14435417678350 1.18160829589117 1.15535259925780 -1.40916675924167 -1.27097223936517 0.901358929472944 -0.304729867611704 0.341595310131972 0.304729867611705 -0.795201298465138 -0.810351257796765 0.412218876923585 -0.713512040042037 -0.112014889270541 0.112014889270541 0.200714616234694 -1.16130461221122 1.12591162255166 1.02349147936924 0.674202358060975 0.587957098875975 -0.570573768586576 -0.685916408078557 -0.452084951925889 0.263691800279522
MMP1404 1.53650426736178 1.62322898408626 -1.53164439271750 -1.3053122355238 0.94226526919590 -1.10568322831256 -0.943821790994187 -0.944944544905785 -1.01618052485845 0.332805138945952 0.0950493331873364 -1.53679877430616 -1.54929042467732 0.0077743602607267 -0.0115604843733761 -0.178222711044091 -1.61967706262487 -1.84584509218784 -0.435091945429532 -0.3265563469782 0.102445107007841 0.174554633509434 1.29596525752566 -1.28177327579860 -1.25911328633749 0.707600054266674 0.547496736235884 -0.968520147947045 -0.867687467150631 0.93963990271854 -0.381057049675141 -0.364445978097360 1.83698794701027 1.84981444924386 -0.952727919714414 -0.922403382048873 1.68919497903509 0.152434131705777 -0.161742085818954 -0.152434131705777 -0.501942435014566 -0.239044869072132 0.397028580912551 -0.593457963014933 -0.111620134847301 0.111620134847301 0.139602706473114 -1.67797169307378 1.09871971559032 1.0528725262467 1.24417313715551 1.53137547075974 -1.22204942603066 -1.10136465337028 0.840684072544267 -0.314891039031123
MMP1417 1.66846998101248 1.60534185909457 -1.31765992620234 -1.36784722423555 1.63231218888401 -1.18951664420721 -1.53803624351404 -0.284206394919757 -0.245064863990132 1.93709811416409 1.69562766481651 -1.22271900953025 -1.25236645372906 0.746772819640985 0.684352544571847 -0.18573528481929 -0.42602429860542 -0.530524898187387 0.761953162720648 0.581002945908429 -0.082630384152263 0.0181354929657281 1.88448698906794 -1.10094644700815 -1.16505441412451 0.0705960941462802 0.0850642497253058 -0.956448021643804 -1.00320138563277 -0.469268713972025 -0.908392377289362 -0.871563579119214 1.19428790275825 1.31750561540895 -1.20206571143660 -1.04365521540196 1.11636759014306 -0.237840942979183 0.214223458922179 0.296117803347672 -0.938971971221872 -1.07784611877823 0.416466293000405 -0.559552893125348 -0.106512220219234 0.106512220219234 0.1230183532631 -0.364068436585791 1.01567777945603 0.899847401855345 0.745587367544661 0.835552297159177 0.399420423443917 0.0960640089340067 -0.204153815870355 1.10744024809307
MMP1420 1.59049897484752 1.73444601953899 -2.13491273020500 -2.07408049547193 1.99123621931984 -2.31424969017264 -2.21911595269302 -0.507852121624834 -0.539372096738455 0.933913580773482 1.12323422759652 -1.60606702238942 -1.4746751657746 0.277447125682499 0.305393339930591 -0.559693502104409 0.06006202957327 -0.039819435556491 -0.0551832822469282 0.197659601626472 -0.454140934472483 -0.527457135512796 1.2552096727394 -1.28909813279448 -1.29201020546782 1.08641873906457 1.04449710138669 -1.05589529194573 -0.94821095083347 1.19287402364030 -1.21158854092623 -1.3156094956681 0.773342057233823 0.757402033538117 -1.57182552232962 -1.58487768115549 1.10389123729230 -0.438428786326004 0.438428786326004 0.448824516721766 -0.73658884215778 -0.707832596197416 0.465466917069334 -0.655438559532345 -0.29124825973667 -0.0573450250784625 0.0573450250784625 -1.32776490082297 0.670075075314426 0.60622366916872 0.695437649447946 0.872460700776348 0.0957787332805429 0.0836262419040922 -0.95745484699306 0.856920048887531
MMP1497 1.72812214517884 1.68271360271472 -0.998788487349916 -1.32654047543322 0.334183349194154 -0.693872054087973 -0.44174575179269 -0.639600065970355 -0.504035951467193 1.38565073767653 1.35293822702579 -1.71041405880277 -1.47474981745935 0.227215811482305 0.286323721213813 -0.606201399544324 -0.327345342553911 -0.0703840392870186 0.450446076963697 0.614362234837197 -0.191921700733124 -0.171889518987771 1.18158225184824 -1.28311225792446 -1.35468918067535 0.718583891758386 0.975773664231908 -0.865007281885919 -0.95789422248983 0.945209221512614 -1.17601416167450 -0.986208855877867 1.33189784733553 1.26965840638413 -1.33783745964643 -1.10989590542979 0.76418613935709 -0.301745438743581 0.339952760221503 0.301745438743581 -1.14146074448953 -0.984784747558304 -0.00573562636114370 -0.641066546364756 -0.0896743121463432 0.00573562636114374 0.0495249276183372 -0.350449116214367 0.456881006917275 0.766650879991056 0.931942598740835 0.894025623623062 0.84123802496423 1.19835894372626 -1.42753335884153 1.11697409674881
MMP1547 1.57986874795151 1.73577270875501 -1.78197252234985 -1.56902285736378 1.38176851086622 -1.65478138795376 -1.31229622224450 -0.317011070751569 -0.313292923195845 0.204348537245147 0.282568884608652 -1.09980868954626 -1.17913537986760 0.790244945545913 0.741695874884541 -0.901982445146873 -0.637043941183255 -0.757429716077487 0.386005498412512 0.5404097538114 -0.514814224266613 -0.551763421298599 1.11855897732564 -1.77904202163301 -1.74223067482923 0.591895240681981 0.57047468311855 -0.471629169928297 -0.465513742057685 0.328490468672434 -1.28905348972050 -1.36654139378190 1.42137802753799 1.46506886865119 -0.269720726412254 -0.301129214972255 0.0417248839396016 -0.795919804036584 0.51173917722739 0.531030833009401 -0.0952249884828603 -0.0417248839396016 0.311702610716228 -0.386390066031946 -0.0743044427243554 0.0743044427243554 0.166227464651393 -1.38484689063152 1.12826915792071 0.943280692372896 1.89318219164590 1.85835830939306 -0.0651217437297928 0.0144201707237530 -0.90427064627736 0.592385857633195
[+] Show/hide bicluster #10 motif PSSM #1. bicluster 10 motif PSSM #1 Methanococcus maripaludis S2 9x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 0 0.333333 0.666667 0
4 0 0 1 0
5 0 1 0 0
6 0 0 1 0
7 0.333333 0.333333 0 0.333333
8 0 0 0.333333 0.666667
9 0 1 0 0 [+] Show/hide bicluster #10 motif PSSM #2. bicluster 10 motif PSSM #2 Methanococcus maripaludis S2 17x4
POSITION A C G T
1 0.166667 0 0.833333 0
2 0 0.166667 0.166667 0.666667
3 0 0.333333 0.166667 0.5
4 0.166667 0.333333 0 0.5
5 0 0 0 1
6 0.666667 0 0 0.333333
7 0.5 0.5 0 0
8 0.166667 0 0.833333 0
9 0 0.5 0.5 0
10 0 0 1 0
11 0.333333 0 0 0.666667
12 1 0 0 0
13 0 0 0 1
14 0.833333 0 0 0.166667
15 0.5 0 0 0.5
16 0.833333 0 0.166667 0
17 1 0 0 0 |