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[+] Show/hide bicluster #162 rows and columns.
bicluster 162
Methanococcus maripaludis S2
19x37
[+] Show/hide bicluster #162 rows (genes).
bicluster 162 genes
Methanococcus maripaludis S2
19
[+] Show/hide bicluster #162 rows (short gene names).
bicluster 162 short names
Methanococcus maripaludis S2
19
short_name
[+] Show/hide bicluster #162 rows (long gene names).
bicluster 162 long names
Methanococcus maripaludis S2
19
long_name
[+] Show/hide bicluster #162 rows (NCBI RefSeq gene IDs).
bicluster 162 NCBI RefSeq IDs
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #162 gene upstream sequences.
bicluster 162 upstream sequences
Methanococcus maripaludis S2
19
upstream
[+] Show/hide bicluster #162 columns (arrays; conditions).
bicluster 162 arrays
Methanococcus maripaludis S2
37
[+] Show/hide bicluster #162 ratios.
bicluster 162 ratios
Methanococcus maripaludis S2
19x37
GENES ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_minus30m
MMP0100 0.653066275441265 0.502421664849394 0.783350126057365 0.396745594732708 0.249098895138196 0.147170203394442 -4.62848872867815 -3.85540458279077 -0.85064895686043 0.477193317263168 0.419100217770261 0.402502189343716 0.261418947718083 0.319512047210991 0.352708104064081 0.402502189343716 0.419100217770261 0.294615004571173 -0.369306132490626 -0.385904160917171 -0.170129791372086 0.0207475355331812 0.294615004571173 -0.734462757874615 -0.626575573102073 -0.75106078630116 -1.14941346853824 -1.22410459645769 -1.22410459645769 -1.25730065331078 -1.5228691081355 -1.34858980965678 -0.78425684315425 -0.128634720305724 -0.203325848225176 -0.294615004571173 -0.00414950710663625
MMP0101 0.565964837031383 1.15820265345944 1.16911633633129 1.21413527817768 0.610131153068168 0.614394304775224 -2.85462206083685 -2.0526369017154 -0.725089384569744 0.509828473525602 0.260578997579752 0.203931389410241 -0.124624737972925 0.215260911044143 0.192601867776338 0.271908519213654 0.271908519213654 0.362544692284872 -0.0906361730712181 -0.407862778820481 -0.124624737972925 0.124624737972925 -0.0226590432678045 -1.17827024992583 -0.759077949471451 -0.464510386989993 -1.54081494221071 -1.74474633162095 -1.90335963449558 -1.97133676429899 -2.29989289168216 -2.32255193494996 -1.0083274254173 -0.158613302874632 -0.328556127383165 -0.385203735552677 -0.124624737972925
MMP0352 0.894241436340525 0.640428975200128 0.900707582123841 1.1787517510001 1.1230384147616 1.19808486725898 -4.38833656171395 -3.39921254559523 -0.329794919352376 0.338473733019544 0.108485170839597 0.130182205007517 0.125842798173933 0.190933900677692 0.321116105685208 0.403564835523303 0.399225428689719 0.00433940683358389 -0.108485170839597 -0.160558052842604 0.0781093230045102 0.195273307511275 -0.151879239175436 -0.130182205007517 -0.663929245538337 -1.49709535758644 -1.89632078627616 -1.76613858126865 -1.44502247558344 -1.41898603458193 -1.38861018674685 -1.44936188241702 -0.0043394068335839 -0.425261869691222 -0.290740257850121 -0.25602500318145 -0.112824577673181
MMP0567 0.935775242558171 0.592014220012447 0.598576672114866 0.589780192185819 0.859678674351968 0.609886442625468 -3.26056671134727 -1.60822390790762 -1.5260006373129 0.867362064369339 0.635447073896254 0.347872485709628 -0.0510212979040788 0.0417446982851554 0.264383089139317 0.0417446982851554 0.310766087233934 1.33119204531551 0.292212887996087 -0.449915081517786 0.0139148994283851 -0.0695744971419257 -0.672553472371948 -0.0139148994283851 -0.440638481898862 -1.48889423883721 -2.37017120263493 -2.01766041711584 -1.89706462206984 -2.33306480415924 -0.904468462845033 -1.07144725598565 0.143787294093313 -0.0974042959986958 -0.13451069447439 -0.440638481898862 -0.125234094855466
MMP0568 0.407684462571045 0.19682244527521 0.215513558445571 0.217955613024999 0.431165756604002 0.605490883504681 -5.82547191058201 -1.29912381313558 -0.358814578452666 0.502340409833733 0.302652296607901 0.121684943996991 -0.0842434227671476 0.0405616479989971 0.0717629156905333 0.165366718765142 0.00936038030746087 0.633385734138185 0.115444690458684 -0.00936038030746087 0.0405616479989971 -0.152886211688527 -0.121684943996991 0.115444690458684 -0.477379395680504 -1.29485260919875 -1.8564754276464 -1.81279365287825 -1.61310553965242 -1.63182630026734 -1.5070212295012 -1.43213818704151 0.152886211688527 -0.427457367374046 -0.514820916910347 -0.583463705831727 -0.202808239994985
MMP0603 0.760301592772102 -0.0288748644406249 0.213689513748493 0.437654475157067 0.401789200505208 0.134940314579457 -4.53659967795899 -1.60168304216169 -0.925622743675339 0.771740876968608 0.375378493027027 0.170202670751385 -0.14688723640188 -0.0816040202232665 0.00233154343495048 0.179528844491187 0.29610601623871 0.920959656805438 0.142224149531979 -0.10025636770287 -0.0303100646543562 -0.0582885858737617 -0.916296569935537 -0.408020101116333 -0.855676440626825 -0.962927438634547 -1.66705355598959 -1.7043582509488 -1.7043582509488 -1.7090213378187 -1.52249786302266 -1.47586699432365 -0.314758363718314 0.347399971807621 0.14688723640188 -0.212170452580493 0.137561062662078
MMP0681 1.09169002700472 0.230620686154027 0.750247579868992 0.585293392264462 0.469783054292976 0.252755924313636 -4.15258101487368 -3.11188546563561 -0.236653675772038 0.202846007804604 0.067615335934868 0.0450768906232453 0.208480619132509 0.174672951165076 0.292999789051094 0.25919212108366 -0.00563461132790559 0.236653675772038 0.46767274021617 0.354980513658057 0.676153359348679 0.676153359348679 0.067615335934868 -0.760672529267264 -0.631076468725434 -0.997326205039302 -1.85378712688096 -1.81997945891353 -1.5945950057973 -1.51007583587872 -1.13255687690904 -0.901537812464905 -0.72686486129983 -0.366249736313868 -0.400057404281302 -0.247922898427849 -0.123961449213924
MMP0701 0.910215975258293 1.12201733004936 1.33271603135056 0.829170943753747 0.531362616753777 0.390131085313609 -5.37251974890107 -1.96623939198796 0.314401968395589 0.332716646166206 0.448709605380113 0.699010201578543 0.625751490496076 0.723429771939366 0.821108053382655 0.961520582957385 0.631856383086281 0.094625835148187 0.210618794362094 -0.00305244629510281 0.509758531282169 0.534178101642992 -0.131255190689421 -0.344926431346617 -0.802793375612039 -0.735639557119777 -1.37054838650116 -1.39496795686198 -1.17519182361458 -1.18740160879499 -1.29728967541869 -1.21182117915582 -0.344926431346617 -0.784478697841422 -0.497548746101758 -0.180094331411066 0.100730727738393
MMP0702 0.968200569776951 0.649943390281614 0.797768198078471 0.544706777690304 0.265535207788946 0.0183644853821386 -4.47783412823518 -4.15647238626389 0.404591802528263 0.436324492922637 0.483923528514197 0.621431853556483 0.637298198753669 0.721918706471999 0.785384087260746 0.674319670880439 0.536811345838153 0.0555322081901537 0.409880584260659 0.0396658629929669 0.446902056387428 0.536811345838153 0.0819761168521317 -0.563255254500131 -1.13973246333125 -1.0762670825425 -1.54696865672571 -1.45705936727499 -1.43061545861301 -1.46234814900738 -0.959913884429801 -0.965202666162197 -0.531522564105758 -0.526233782373362 -0.272372259218373 -0.129575152443692 -0.013221954330989
MMP1030 1.39312992470494 0.314834926278793 0.574368793387828 0.582385283570674 0.559877445749607 0.348596683010393 -3.83038416896492 -1.62076201653003 -0.990950844651732 0.50955870306381 0.345680527204092 0.243256667291769 0.0793784914320509 0.0435301404627376 0.12034803539698 0.110105649405748 0.243256667291769 0.233014281300536 -0.427619615133951 -0.473710352094497 -0.33543814121286 -0.26886263226985 -0.514679896059426 -1.02679919562104 -1.85643246091087 -1.58500923214321 -1.73864502201169 -1.87179603989772 -1.95885632082319 -1.94349274183634 -1.89228081188018 -1.9947046717925 -1.03704158161228 0.26886263226985 0.284226211256698 0.00256059649780809 -0.483952738085729
MMP1031 0.602391612577996 0.178901124278689 0.512467924577372 0.63984166788673 0.533751313815292 0.501635714574391 -4.07766815702155 -2.5722084680542 -0.697977773651884 0.636497866128143 0.528003911674482 0.253152560391875 0.0180823257422767 0.0795622332660178 0.144658605938214 0.216987908907321 0.394194701181634 0.473756934447652 -0.0831786984144732 -0.300166607321795 -0.191672652868134 -0.126576280195937 -0.162740931680491 -0.951130334043758 -0.925815078004571 -1.00537731127059 -1.42850373363987 -1.71058801521938 -1.91311006353288 -2.06138513461955 -1.54423061839044 -2.15541322847939 -0.947513868895303 0.35803004969708 0.220604374055777 -0.133809210492848 -0.25676902554033
MMP1286 1.6165641317369 2.03171752328621 1.76082395155024 1.41651701676161 1.2573691791108 0.881746062598171 -3.72618271833599 -2.37992893022999 -0.051162354727524 0.142117652020901 -0.0966400033742122 -0.301289422284309 -0.380875307416013 -0.210334124990932 -0.153487064182572 -0.0966400033742122 -0.130748239859228 0.414983543901029 0.346767070930997 0.0966400033742123 0.233072949314277 0.335397658769325 0.233072949314277 0.0511623547275242 -0.710588260104502 -0.198964712829261 -1.16536474657138 -1.89300712491839 -1.91574594924174 -1.96122359788843 -1.29042828034978 -1.38138357764315 0.164856476344245 -0.631002374972798 -0.233072949314277 -0.039792942565852 -0.00568470608083602
MMP1360 0.814919739637961 0.00568803609618431 0.230562030078786 0.397046870417901 0.310104138645365 0.201250909975963 -3.53641241485078 -2.71785709783229 -0.756768395845494 0.563429556084994 0.323393564824905 -0.0056880360961841 -0.172164610679794 -0.0598897115420106 0.0252843498728596 0.0136697051344682 -0.0908620975110543 0.768621613129908 0.36598059553234 0.0872291218109469 0.0523851875957729 -0.214751641387229 -0.779997685322277 -0.354127378247926 -1.30265669854989 -1.29878515030376 -1.53494959331772 -1.69368307140907 -1.6085090099942 -1.67819687842454 -1.92984751442302 -2.00727847934563 -0.354127378247926 0.269191889379079 0.19950402094873 -0.0327888738190974 -0.176036158925924
MMP1422 0.604572115275864 -0.0733909401299887 0.360726240444723 0.414363549481415 0.462793963733051 0.414614484270283 -3.43936741638467 -1.97102252015984 -0.777320169484615 1.05657191937989 0.873182710493441 0.222984606259662 -0.0187557145452052 0.247992225653269 0.306343337571685 0.343854766662095 0.3605265129245 0.193809050300454 -0.348022703227696 -0.523076038982945 -0.410541751711713 -0.348022703227696 -0.648114135950979 -0.439717307670921 -1.63174716543285 -1.66925859452326 -2.21109034805141 -2.31945669875704 -1.88182335936892 -1.79012875492569 -2.26527352340423 -2.19441860178901 -0.493900483023736 0.0937785727260259 0.21881666969406 0.0812747630292224 0.0937785727260259
MMP1435 0.143631766225259 0.649496767399397 0.984250536452288 0.899419490102786 0.636454408913641 0.575367147764889 -3.24938694155418 -1.87804466858648 -0.418445414460216 0.551755458005064 0.58878602565641 0.692471615080181 0.233292576203483 0.366602619748331 0.69987772861045 0.885030566867183 0.677659388019642 -0.00370305676513466 -0.0481397379467506 -0.48510043623264 0.144419213840252 0.0777641920678279 -1.05537117806338 0.203668122082406 -1.95151091522596 -1.20349344866876 -1.44048908163738 -1.92188646110489 -1.95151091522596 -2.28478602408808 -2.43290829469347 -2.36625327292105 0.218480349142945 -0.536943230944525 -0.396227073869408 -0.566567685065603 0.144419213840252
MMP1436 0.374275886533224 0.522676722375817 0.790510078981443 0.657137176214994 0.568254864792391 0.409472887685245 -3.95673481313252 -2.52779591013923 -0.509070093294212 0.555050617849818 0.410540397817913 0.305442055976527 0.193775067770055 0.423677690548086 0.620737081500684 0.804659179723109 0.673286252421377 0.134657250484275 0.0952453722937559 -0.522207386024385 -0.00328432318254331 0.187206421404968 -0.995149924310621 0.154363189579535 -1.68485779264471 -1.48122975532703 -1.94103500088309 -2.00015281816887 -1.79652478085119 -2.07897657454991 -2.0329960499943 -1.99358417180378 0.246324238690748 -0.68642354515155 -0.535344678754558 -0.692992191516637 0.147794543214449
MMP1714 -0.0545802666856867 0.204560576779928 0.340097542343578 0.282985463852619 0.248332604278067 0.301849124814049 -4.44423748365888 -2.22239006710096 0.176566295320305 0.754734360388755 0.720113518169087 0.907066066155292 0.969383582150694 1.0109285928143 1.1044048668074 1.11132903525133 0.903603981933325 -0.432760527745846 -0.00346208422196677 -0.110786695102936 0.263118400869474 0.418912190857978 0.23542172709374 -0.0242345895537674 -0.57816806506845 -1.42984078367227 -2.56194232425541 -2.4061485342669 -1.71719377409551 -1.36752326767687 -1.15979821435887 -0.965921497928727 0.0138483368878671 -0.924376487265126 -0.519312633295015 -0.221573390205873 0.218111305983906
MMP1715 0.0237124973232285 0.156635047576029 0.264516277910079 0.203120071591929 0.190197047139646 0.155214934826052 -4.37281450400162 -2.87284410082724 0.0330225866187294 0.765809508729581 0.690329310743914 0.847579723214054 0.904189871703304 0.976525061439569 1.05200525942524 1.06773030067225 0.960800020192555 -0.306638304316773 0.199708023837078 -0.0927777433573825 0.250028155827522 0.482758766283329 0.124227825851411 -0.0393126031175349 -0.765809508729581 -1.45142130709939 -2.54273916964216 -2.32573360043337 -1.61496173606834 -1.3476360348691 -0.91047988820211 -0.954510003693749 0.0047175123741042 -0.740649442734359 -0.416713593045871 -0.139952867098424 0.356958436307218
MMP1716 -0.021126800723456 0.16623813797391 0.252611648848047 0.314140274005582 0.235325831498604 0.326257021866316 -5.00716847340703 -2.75245293912549 0.03508111589871 0.703468692495184 0.629613711655794 0.747781680998817 0.825329410880176 0.976732121600924 1.05797260052425 1.0764363457341 0.877027897467749 -0.404356020095657 0.0793941044023436 -0.190176575661428 0.201254822787336 0.385892274885809 0.0387738649406794 -0.027695617814771 -0.566836977942313 -1.49740973651862 -2.0919423322757 -1.88514838592541 -1.31646503346212 -1.16506232274137 -0.943497380223199 -0.836407658006084 0.0166173706888626 -1.01735236106259 -0.614842715487916 -0.267724305542786 0.323115541172328
[+] Show/hide bicluster #162 motif PSSM #1. bicluster 162 motif PSSM #1 Methanococcus maripaludis S2 10x4
POSITION A C G T
1 0.125 0.875 0 0
2 0 0.875 0 0.125
3 0.625 0 0 0.375
4 0 0.875 0.125 0
5 0 1 0 0
6 0.125 0.125 0.25 0.5
7 0 0.25 0 0.75
8 0.375 0.25 0 0.375
9 0 0 0 1
10 0 0 0.75 0.25 [+] Show/hide bicluster #162 motif PSSM #2. bicluster 162 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 0.5 0 0.5 0
3 0 0 1 0
4 0 0.5 0.5 0
5 0 0 1 0
6 0 1 0 0 |