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[+] Show/hide bicluster #155 rows and columns.
bicluster 155
Methanococcus maripaludis S2
23x40
[+] Show/hide bicluster #155 rows (genes).
bicluster 155 genes
Methanococcus maripaludis S2
23
[+] Show/hide bicluster #155 rows (short gene names).
bicluster 155 short names
Methanococcus maripaludis S2
23
short_name
[+] Show/hide bicluster #155 rows (long gene names).
bicluster 155 long names
Methanococcus maripaludis S2
23
long_name
[+] Show/hide bicluster #155 rows (NCBI RefSeq gene IDs).
bicluster 155 NCBI RefSeq IDs
Methanococcus maripaludis S2
44
[+] Show/hide bicluster #155 gene upstream sequences.
bicluster 155 upstream sequences
Methanococcus maripaludis S2
23
upstream
[+] Show/hide bicluster #155 columns (arrays; conditions).
bicluster 155 arrays
Methanococcus maripaludis S2
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[+] Show/hide bicluster #155 ratios.
bicluster 155 ratios
Methanococcus maripaludis S2
23x40
GENES ts_GrowthCurveInDefinedMedium_0912m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m
Antisense_18 -0.445125081792088 1.90461097195795 -0.6813242501313 -0.758747460373493 -0.665839608082861 -0.603901039889107 -0.278723556871895 -1.20780207977821 -1.03747101724539 -0.851655312664125 0.294208198920334 -0.0929078522906318 -0.6813242501313 -0.557447113743791 0.433569977356282 -0.232269630726579 0.123877136387509 0 0.325177483017211 0.0774232102421933 1.6413720571345 0.44905461940472 2.35366559136267 0.743262818325055 0.44905461940472 0.743262818325055 1.45555635255323 2.0439727503939 2.10591131858765 2.0439727503939 0.170331062532825 0.0309692840968773 -0.91359388085788 -1.14586351158446 -1.1613481536329 -1.1613481536329 -0.495508545550036 -0.433569977356282 -1.0839249433907 -0.898109238809441
MMP0032 0.247933485247835 1.33353597157025 -0.325975459717172 -0.029634132701561 -0.0651950919434343 -0.136317010427181 0.325975459717172 -0.242999888152801 -0.468219296684665 -0.314121806636548 0.835682542184023 0.527487562087788 -0.325975459717172 -0.622316786732783 -0.171877969669054 -0.491926602845914 0.0177804796209367 0.539341215168412 0.515633909007163 0.574902174410285 0.80012158294215 0.883097154506521 1.68914556398898 0.788267929861525 0.657877745974657 0.776414276780901 1.64173095166649 2.00919419716584 1.64173095166649 2.4714866673102 0.835682542184023 0.00592682654031223 0.0296341327015611 -0.337829112797797 -0.456365643604041 -0.622316786732783 -0.254853541233425 -0.148170663507805 -0.871243501425896 -1.04904829763526
MMP0197 0.237755361951183 1.71352010795213 -0.345091781768098 -0.437465392204262 -0.358288011830407 -0.292306861518861 0.248738571035813 -0.397876702017334 -0.648605073201208 -0.252718171331934 0.736999083341251 0.789784003590488 -0.912529674447391 -0.872940984260463 -0.965314594696627 -1.0708844351951 0.539055632406614 0.14316873053734 0.486270712157378 0.459878252032759 2.21497685031987 0.697410393154324 2.41292030125451 0.578644322593542 0.129972500475031 0.697410393154324 2.08301454969678 2.47890145156606 1.54196911714211 2.58447129206453 0.486270712157378 0.129972500475031 -0.371484241892716 -0.688193763388135 -1.08408066525741 -1.05768820513279 -0.556231462765044 -0.477054082391189 -0.952118364634318 -1.11047312538203
MMP0201 1.18778483666589 1.4541102059105 -0.374411609905098 -0.478898570808846 -0.252510155517392 -0.217681168549476 0.53114205126072 -0.391826103389056 -0.235095662033434 -0.217681168549476 0.409240596873014 -0.235095662033434 -0.774944960036133 -0.879431920939881 -0.670457999132385 -0.949089894875713 0.461484077324888 0.322168129453224 0.426655090356972 0.757530466552175 0.740115973068217 0.827188440488007 2.60346677585173 0.757530466552175 0.513727557776762 0.931675401391755 2.29000589314048 2.60346677585173 2.01137399739715 2.35966386707631 0.61821451868051 0.200266675065517 -0.409240596873014 -0.635629012164469 -0.809773947004049 -0.705286986100301 -0.287339142485308 -0.426655090356972 -0.966504388359671 -0.879431920939881
MMP0494 0.877794419700648 2.27359343670289 -0.195739832298925 -0.331252023890488 -0.0150569101768404 -0.0301138203536807 0.331252023890488 -0.82813005972622 -0.692617868134656 -0.647447137604135 0.993756071671464 0.0301138203536807 -0.572162586719933 -0.572162586719933 -0.707674778311497 -0.782959329195698 0.0451707305305211 0.120455281414723 0.451707305305211 0.602276407073614 1.43040646679983 0.873300790256741 2.25853652652605 0.225853652652605 -0.135512191591563 0.511934946012572 3.55343080173432 2.28865034687973 1.68637393980612 2.4994470893555 0.752845508842018 0.0150569101768404 -0.542048766366253 -0.782959329195698 -1.11421135308619 -1.24972354467775 -0.722731688488337 -0.557105676543093 -0.978699161494623 -1.05398371237883
MMP0495 -0.302898449457329 1.36296735588639 0.454322451962129 -0.54225582976125 -0.351733511196487 -0.366389074163007 0.0439666888995609 -0.571566955694291 -0.718122585359494 -0.54225582976125 0.864678215024696 0.146555629665203 -0.425011326029088 -0.54225582976125 -0.439666888995608 -0.395700200096047 0.249144570430845 0.175866755598243 0.366389074163007 0.51294470382821 1.37762291885291 0.820711526125136 2.28626782277716 1.09916722248902 0.586222518660811 0.806055963158615 2.21299000794456 2.44747901540889 2.22764557091108 2.55006795617453 0.820711526125136 -0.102588940765642 -0.454322451962129 -0.659500333493412 -0.981922718756859 -0.923300466890777 -0.425011326029088 -0.410355763062568 -0.806055963158615 -0.937956029857298
MMP0497 0.0629641113488632 2.11325422930977 -0.0182702094753006 -0.29841342142991 -0.152251745627505 -0.0426304887757014 0.322773700730311 -0.140071605977305 -0.103531187026703 -0.31059356108011 0.773438867787726 0.176612024927906 -0.761258728137525 -0.334953840380511 -0.359314119680912 -0.28623328177971 0.334953840380511 0.420214817931914 0.834339566038728 0.773438867787726 1.35808557099735 0.566376493734319 2.25941590511218 0.797799147088127 0.468935376532716 1.02922180044193 2.08889395000937 2.51519883776638 2.25941590511218 2.39339744126438 0.432394957582114 0.237512723178908 -0.225332583528707 -0.627277191985321 -0.919600543590131 -0.992681381491333 -0.456755236882515 -0.468935376532716 -0.883060124639529 -0.931780683240331
MMP0586 -0.0396712799929197 1.85845280737985 -0.649338932698984 -0.455283619478598 -0.261228306258212 -0.0223909976792753 0.0373183294654588 -0.634411600912801 -0.977740231995022 -0.649338932698984 0.858321577705554 0.664266264485168 -0.888176241277921 -0.58962960555425 -0.276155638044396 -1.44048751736671 0.529920278409516 0.231373642685845 0.679193596271351 0.500065614837149 0.679193596271351 0.261228306258212 1.82859814380748 0.320937633402946 -0.00746366589309178 0.485138283050965 1.60468816701473 2.15699944310352 1.84352547559367 2.41076408346864 0.0373183294654588 -0.141809651968744 -0.455283619478598 -0.709048259843718 -0.977740231995022 -0.903103573064104 -0.306010301616763 -0.291082969830579 -0.947885568422655 -1.14194088164304
MMP0771 0.567822291099346 1.78898724282516 -0.166585856619347 -0.0217285899938279 -0.224528763269555 -0.0217285899938279 0.369386029895073 -0.34041457656997 -0.615643383158456 -0.528729023183145 0.514243296520593 -0.354900303232522 -0.485271843195489 -0.818443556434183 -0.412843209882729 -0.239014489932106 0.0217285899938279 0.601157656495904 0.789472103109079 0.789472103109079 2.04973032275109 0.890872189746942 2.65813084257827 0.673586289808663 0.325928849907418 0.832929283096734 1.84693014947537 2.23804476936427 1.70207288284985 2.58570220926551 0.731529196458871 0.253500216594658 -0.485271843195489 -0.64461483648356 -0.818443556434183 -0.673586289808663 -0.282471669919762 -0.123128676631691 -0.746014923121423 -0.803957829771631
MMP0774 0.00490753231919754 1.57753443257147 -0.245438710982579 -0.713841532590217 -0.587246175398963 -0.410012675331208 -0.00490753231919754 -0.675862925432841 -0.789798746904969 -0.523948496803336 0.666047860794445 0.349559467816312 -1.51139228289511 -0.701181996871091 -0.637884318275465 -0.574586639679838 0.362219003535437 0.222964110625059 0.526792967884067 0.514133432164941 1.93200143270698 0.362219003535437 2.12189446849386 0.412857146411939 0.0963687534338052 0.488814360726691 1.80540607551573 2.10923493277473 1.47625814681847 2.19785168280861 0.27360225350156 0.0837092177146798 -0.422672211050334 -0.827777354062345 -1.09362760416398 -1.08096806844485 -0.549267568241587 -0.473310353926835 -1.01767038984922 -1.1062871398831
MMP0780 1.58162081430667 1.37437275595215 -0.31394301531902 -0.620909519186505 -0.36975510693129 -0.453473244349695 0.0348825572576689 -0.746486725314113 -0.858110908538654 -0.509285335961965 0.64881556499264 0.523238358865033 -0.899969977247856 -0.439520221446627 -0.495332313058898 -0.690674633701843 -0.0348825572576689 0.299989992415952 0.327896038222087 0.286036969512885 1.75110437433498 0.467426267252763 2.29527226755461 0.509285335961965 -0.104647671773007 0.36975510693129 2.18364808433007 2.05807087820246 1.82086948885031 2.79758109206504 0.286036969512885 0.523238358865033 -0.0627886030638039 -0.620909519186505 -0.634862542089573 -0.579050450477303 -0.188365809191412 -0.188365809191412 -0.774392771120248 -0.872063931441721
MMP0782 1.03247222158228 1.78404914347792 -0.349191113492119 -0.615846145613373 -0.311097537474797 -0.450773982871644 0.00634892933622035 -0.704731156320458 -0.907896895079509 -0.615846145613373 0.590450428268492 -0.425378265526763 -1.51739411135666 -0.653939721630695 -0.717429014992898 -0.831709743044865 0.311097537474797 0.222212526767712 0.476169700216526 0.577752569596051 2.25386991435822 0.247608244112593 2.16498490365114 0.273003961457475 -0.00634892933622035 0.438076124199203 1.8094448608228 2.15228704497869 1.25073907923541 2.25386991435822 0.146025374733068 0.323795396147237 -0.311097537474797 -0.679335438975576 -1.32692623127005 -1.02217762313147 -0.514263276233847 -0.298399678802356 -0.907896895079509 -1.07296905782124
MMP0786 1.00578914708234 1.61038975785921 0.254978378327708 -0.657575817792509 -0.268398292976534 -0.0805194878929603 0.308658036923014 -0.818614793578429 -0.738095305685469 -0.456277098060108 0.697835561738989 0 -0.268398292976534 -0.496536842006588 -0.85887453752491 -1.38225120882915 0.496536842006588 0.268398292976534 0.362337695518321 0.214718634381227 1.12727283050144 0.456277098060108 2.49610412468177 0.402597439464801 0.241558463678881 0.617316073846029 1.67748933110334 2.01298719732401 1.47619061137094 2.41558463678881 0.254978378327708 -0.241558463678881 -0.429437268762455 -0.89913428147139 -0.952813940066697 -0.872294452173736 -0.442857183411282 -0.295238122274188 -1.12727283050144 -1.32857155023384
MMP0803 1.47913965771783 1.63680260022406 -0.2155788790539 -0.822393501575991 -0.295422908333123 -0.359298131756501 0.199610073198056 -0.407204549324034 -0.439142161035723 0.0239532087837667 0.67867424887339 -0.0239532087837666 -1.63680260022406 -0.870299919143524 -0.646736637161701 -0.662705443017546 0.423173355179879 0.838362307431835 1.25355125968379 0.870299919143524 1.09386320112535 0.151703655630523 2.3713676695929 0.375266937612345 0.0878284322071447 0.343329325900656 1.7964906587825 2.43524289301628 1.5090521533773 2.89833826283577 0.00798440292792225 -0.00798440292792225 -0.598830219594168 -0.950143948422746 -1.09386320112535 -1.04595678355781 -0.375266937612345 -0.135734849774678 -1.02998797770197 -1.38130170653055
MMP0804 2.18584468221393 1.67502487543404 -0.14020031997025 -0.302537532567381 -0.00737896420896053 -0.361569246239066 0.184474105224013 -0.494390602000355 -0.627211957761645 -0.243505818895697 0.951886382955907 -1.02567602504551 -0.671485743015408 -0.922370526120065 -0.863338812448381 -0.774791241940855 0.110684463134408 0.641969886179565 0.966644311373829 0.671485743015408 1.97018344379246 0.435358888328671 2.39816336791217 0.538664387254118 0.213989962059855 0.671485743015408 1.52744559125483 2.38340543949425 1.21752909447849 2.79662743519604 0.273021675731539 0.14020031997025 -0.479632673582434 -0.819065027194618 -0.922370526120065 -0.966644311373829 -0.346811317821145 0.00737896420896043 -0.730517456687092 -0.996160168209671
MMP0805 1.34810245328233 2.19950683050462 -0.110343152032004 -0.272179775012277 -0.198617673657608 -0.228042514199475 0.345741876366946 -0.36045429663788 -0.684127542598426 -0.478153658805351 0.478153658805351 0.0514934709482686 -1.09607531018457 -0.419303977721616 -0.345741876366946 -0.419303977721616 0.860676585849633 0.36045429663788 0.816539325036831 0.639990281785624 1.47859823722886 0.43401639799255 2.61145459809077 0.463441238534418 0.507578499347219 0.845964165578699 1.81698390346034 2.31720619267209 1.81698390346034 2.68501669944543 0.389879137179748 0.183905253386674 -0.198617673657608 -0.669415122327492 -0.816539325036831 -0.684127542598426 -0.213330093928541 -0.228042514199475 -0.96366352774617 -0.993088368288038
MMP0807 -0.0514618301669424 2.06152212944331 -0.205391503671473 -0.41839010007152 -0.342319172785789 -0.433604285528666 0.0380354636428654 -0.600960325557274 -0.631388696471566 -0.220605689128619 0.600960325557274 0.403175914614374 -0.646602881928712 -0.311890801871497 -0.114106390928596 -0.357533358242935 0.327104987328643 -0.0684638345571578 0.433604285528666 0.372747543700081 1.66595330755751 0.722673809214443 2.33537746767194 0.646602881928712 0.41839010007152 0.646602881928712 2.13759305672904 2.30494909675764 1.57466819481463 2.73094628955774 0.570531954642981 0.0228212781857192 -0.29667661641435 -0.464032656442958 -0.311890801871497 -0.0988922054714501 0.342319172785789 0.251034060042912 -0.631388696471566 -0.448818470985812
MMP0834 0.661016047370858 2.19005194987931 -0.534979617495415 -0.621488556142232 -0.376379896642918 -0.376379896642918 0.142673735237982 -0.693579338347913 -0.909851684964954 -0.549397773936552 0.820327087971379 -0.160107550025877 -0.808924589877002 -0.549397773936552 -0.679161181906777 -0.635906712583368 0.416618707619568 0.243600830325935 0.575218428472065 0.575218428472065 0.96450865238274 0.89241787017706 2.59376033023112 1.07985390391183 0.243600830325935 0.676145523560018 2.31981535784953 2.43516060937862 1.90168882105659 3.05514133634748 0.834745244412515 0.0850011094734373 -0.434052522407463 -0.780088276994729 -1.06845140581745 -0.981942467170635 -0.477306991730871 -0.304289114437238 -0.92426984140609 -1.02519693649404
MMP0869 1.97781757146197 1.57372348938456 0.074939213780217 -0.183941706551442 -0.129440460165829 -0.08856452537662 0.292944199322666 -0.238442952937054 -0.456447938479503 -0.156691083358635 0.551825119654325 -0.878832597967999 -0.292944199322666 -0.701703547214759 -0.756204793600371 -0.715328858811162 0.306569510919069 0.279318887726263 0.361070757304682 0.115815148569426 1.12408820670325 0.224817641340651 1.95523221408384 0.660827612425549 0.565450431250728 1.09683758351045 2.39124218516874 2.54112061272917 1.56009817778815 1.94160690248744 0.143065771762232 0.0476885905874108 -0.919708532757208 -1.00146040233563 -1.30121725745649 -1.17858945308887 -0.647202300829146 -0.456447938479503 -1.05596164872124 -0.987835090739223
MMP1037 0.932298501105791 2.53770175745425 -0.197545645789851 -0.395091291579703 -0.258328921417498 -0.212741464696763 0.471070386114261 -0.592636937369554 -0.866161677693964 -0.668616031904112 0.471070386114261 -0.607832756276466 -0.471070386114261 -0.668616031904112 -0.121566551255293 -1.3068404259944 0.911749134414699 0.36469965376588 0.774986764252494 0.805378402066317 1.12449059911146 0.36469965376588 2.49211430073351 0.349503834858968 0.303916378138233 0.911749134414699 1.8234982688294 2.32496029275748 1.8234982688294 2.72005158433719 0.258328921417498 0.0607832756276466 -0.151958189069116 -0.471070386114261 -0.455874567207349 -0.699007669717936 -0.288720559231321 -0.410287110486614 -0.805378402066317 -0.957336591135434
MMP1055 -0.45522845323711 1.88993914806894 -0.39102189270392 -0.0814628943133166 0.162925788626633 0.0488777365879899 0.684288312231859 -0.114048052038643 -0.358436734978593 0.0651703154506532 0.798336364270502 0.814628943133166 -1.01013988948513 -1.84106141148095 -0.456192208154573 -0.716873469957186 -0.34214415611593 0.211803525214623 0.228096104077286 0.586532839055879 1.43374693991437 0.0162925788626632 1.53150241309035 0 0.19551094635196 0.602825417918542 1.75959851716764 1.56408757081568 1.61296530740367 2.2646684619102 0.228096104077286 0.260681261802613 -0.667995733369196 -0.830921521995829 -1.10789536266111 -1.04272504721045 -0.456192208154573 -0.488777365879899 -0.553947681330553 -0.39102189270392
MMP1571 0.39893035007372 1.96489392127233 -0.203264888407482 -0.414058106015242 -0.368888130813579 -0.188208230006928 0.15809491320582 -0.564624690020785 -0.670021298824664 -0.399001447614688 0.639907982023556 0.15809491320582 -1.1518343676424 -0.805531224429653 -0.670021298824664 -0.594738006821893 -0.112924938004157 0.188208230006928 0.338774814012471 0.534511373219676 1.54330748605681 0.685077957225219 2.62738689089672 0.715191274026327 0.233378205208591 0.850701199631315 2.23591377248231 2.43165033168951 1.93478060447122 2.61233023249616 0.489341398018013 0.188208230006928 -0.489341398018013 -0.730247932426881 -0.986211125236304 -1.06149441723908 -0.534511373219676 -0.429114764415796 -1.03138110043797 -1.10666439244074
MMP1596 0.566086979981951 1.33278108311486 -0.346888227112086 -0.100415013111393 0.0730291004446497 -0.00912863755558122 0.164315476000462 -0.255601851556274 -0.310373676889761 -0.219087301333949 0.438174602667898 0.492946428001386 -0.155186838444881 -0.429045965112317 -0.419917327556736 -0.365145502223249 0.0273859126667436 0.356016864667667 0.292116401778599 0.474689152890223 1.30539517044811 0.337759589556505 1.49709655911532 0.839834655113472 0.219087301333949 0.639004628890685 1.70705522289369 1.82572751111624 1.34190972067044 1.76182704822717 0.200830026222787 -0.0273859126667437 -0.456431877779061 -0.575104166001617 -0.812448742446728 -0.90373511800254 -0.502075065556967 -0.648133266446266 -0.74854827955766 -0.830706017557891
[+] Show/hide bicluster #155 motif PSSM #1. bicluster 155 motif PSSM #1 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 0 0.285714 0.714286
2 0 0.142857 0.857143 0
3 0.285714 0 0.714286 0
4 0 0 1 0
5 0.714286 0 0.285714 0
6 0.571429 0.142857 0 0.285714
7 0.857143 0.142857 0 0
8 1 0 0 0
9 0 0.714286 0 0.285714
10 0 0 0.714286 0.285714
11 0 0 0.857143 0.142857 [+] Show/hide bicluster #155 motif PSSM #2. bicluster 155 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0 1 0 0
4 0 1 0 0
5 0 0 0 1
6 0 0 1 0 |