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[+] Show/hide bicluster #154 rows and columns.
bicluster 154
Methanococcus maripaludis S2
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[+] Show/hide bicluster #154 rows (genes).
bicluster 154 genes
Methanococcus maripaludis S2
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[+] Show/hide bicluster #154 rows (short gene names).
bicluster 154 short names
Methanococcus maripaludis S2
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short_name
[+] Show/hide bicluster #154 rows (long gene names).
bicluster 154 long names
Methanococcus maripaludis S2
24
long_name
[+] Show/hide bicluster #154 rows (NCBI RefSeq gene IDs).
bicluster 154 NCBI RefSeq IDs
Methanococcus maripaludis S2
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[+] Show/hide bicluster #154 gene upstream sequences.
bicluster 154 upstream sequences
Methanococcus maripaludis S2
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upstream
[+] Show/hide bicluster #154 columns (arrays; conditions).
bicluster 154 arrays
Methanococcus maripaludis S2
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[+] Show/hide bicluster #154 ratios.
bicluster 154 ratios
Methanococcus maripaludis S2
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GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
MMP0299 -0.457839551837128 -0.592939747461198 -1.07441275680088 -0.754782876697725 -0.87769427262806 -0.708992361648958 -0.988781469266673 -1.08073907364652 0.743199736184684 0.99323662338437 0.918180959148775 0.778077052575665 0.592939747461198 0.973221779588211 -0.357765332856335 -0.397795020448652 -1.33849267886811 -1.10331826426324 -0.783080763524705 -0.683006544543912 -0.407802442346731 -0.602947169359277 0.547906348919841 0.818106740167982 0.828114162066062 0.913177248199736 1.18337763944788 1.09331084236516 0.84812900586222 1.21840361609115 0.387787598550573 0.657987989798714 -0.482858106582326 -0.783080763524705 -0.647980567900634 -0.502872950378485 -0.537898927021762 -0.407802442346731 -0.462843262786167 0.923184670097815
MMP0303 -0.461535407796106 -0.605003892330966 -1.40674885152665 -0.787363191054451 -0.816291215307909 -0.735618699674233 -0.990877951878472 -1.0211505167508 0.378150961538317 0.112338530343334 0.307239113107671 0.296411302954097 0.301825208030884 0.150235865880844 -0.802611427633697 -0.94066600709177 -1.01646067816679 -1.51453994523121 -1.35482974546599 -1.24655164393024 -1.23301688123828 -1.04082325101233 0.943372959630163 1.0976692543186 1.22760297616149 1.40355489115707 1.68237100261161 2.14525988667691 2.02074006991081 1.97201492421972 0.989391152782854 0.263927872493374 -0.475070170488074 -0.848629620786388 -0.770127997172974 -0.507553600948797 -0.355964258798756 -0.0771481473442171 -0.274755682646949 0.296411302954097
MMP0332 0.0624554273293439 0.240899505413184 -1.65463448241935 0.785058279698634 0.489211791962863 -0.283373255599914 -0.681013497800155 -0.914413944365088 -1.2212724213701 0.463954603017983 0.544254438155711 0.642398681101823 0.535332234251519 0.918987002131774 -0.99036463336531 -0.883298186515006 -1.30264177001203 -1.49893025590425 -1.35617499343718 -0.865453778706622 -0.490721214730559 -0.231977301508992 1.52569686761683 1.73982976131744 1.23126413877849 1.19557532316173 1.09743108021561 1.72198535350905 1.76659637303001 1.45431923638329 1.5613856832336 0.838687166994046 -0.67808749671859 -0.731620720143742 -0.579943253772479 -0.81192055528147 -0.660243088910207 -0.918987002131774 -0.455032399113791 0.90114259432339
MMP0416 -0.69406735197299 -0.748862142918226 -1.156025568988 -1.17574087306171 -1.16281988823039 -1.20990883032093 -0.802367581121211 -1.24847542115835 -1.04185746482993 0.0104371030371878 0.14611944252063 0.203523509225163 0.568822115526736 -0.0104371030371877 -1.05675668251527 -1.25506164022183 -1.08545871586753 -1.028054649163 -1.14025350681277 -1.06458450979316 -1.05936595827456 -1.02022682188511 1.32551208572285 1.59426748893044 0.931511446069012 0.981087685495655 1.30724715540777 2.11090408927123 2.01436088617725 1.85780434061943 1.33073063724145 0.759299245955414 0.258318300170398 0.06001334246383 0.0547947909452361 0.0678411697417208 -0.0600133424638298 -0.407047018450325 -0.746252867158929 0.866279552086589
MMP0445 -0.351177986758792 -0.251350741791826 -0.955724391497355 -0.218079786365682 -0.0620292594614028 -0.685909384995655 -1.07614302010995 -1.23251552196658 -1.32647854377727 1.3744072476702 1.68815001756638 1.36371147142374 1.07136025402048 1.0927518065134 -0.347612728009972 -0.451005231725759 -0.575789287934467 -0.643529204162051 -0.479527301716321 -0.436744196730478 -0.194306601810702 -0.372569539251714 0.882401540333006 1.68101950006874 1.10701284150868 1.09631706526222 1.38153776516784 2.16589468990829 2.23719986488469 2.31563555735874 0.878836281584186 1.06779499527166 -0.226393930550084 -0.358308504256433 -0.379700056749354 -0.426048420484017 -0.304829623024129 -0.187176084313062 -0.240654965545365 1.26744948520559
MMP0532 -0.781603174693457 -0.70961340860327 -1.45832723591824 -0.838998753747497 -0.686372438203761 -1.15539650104073 -1.71125967958781 -0.694886081636866 -0.29815054241936 0.370233082749533 0.596486633318691 0.791887426992056 0.647907894811682 1.01814097756121 -0.349664578152336 -0.905014202276635 -1.90258667524065 -0.894729949978037 -0.740466165499065 -0.370233082749532 0.185116541374766 -0.617055137915887 0.596486633318691 1.19297326663738 1.87173391834486 1.83059690915047 1.85116541374766 1.56320634938692 1.78945989995607 1.67633312467149 0.575918128721495 0.462791353436916 -0.308527568957944 -0.287959064360747 -0.0925582706873831 -0.277674812062149 -0.195400793673364 -0.833024436186448 -1.05927798675561 0.473075605735514
MMP0601 -0.543072281163031 -0.99266490737177 -1.90285850646456 -1.02702890100975 -1.02890491304514 -1.19131395051487 -1.33864789349732 -1.64008282510132 -0.448681199572934 0.974859258809048 1.09059597446674 1.10395021088878 0.925893725261561 0.899185252417478 -1.22413833868716 -1.00601914379381 -0.658808996820726 -0.961505022387006 -0.850219718869991 -0.716677354649574 -0.721128766790254 -1.55354283709752 0.605392051132559 0.9169909009802 1.04163044091926 1.0549846773413 1.08169315018538 1.66482814061454 1.62031401920773 1.83843321410108 0.716677354649574 0.173605073486543 -0.369467207676488 -0.725580178930935 -0.734483003212296 -0.494106747615545 -0.578683578288476 -0.360564383395127 -0.578683578288476 0.289341789144238
MMP0712 0.0321245258344847 -1.02551370933163 -1.72309076491189 -0.60652620558903 -0.707991500668311 -0.941123632660435 -1.66514247441529 -1.91188762134151 -0.235181083672196 0.160622629172424 0.101315812247221 -0.061777934297086 -0.353369784179331 1.12930063895073 -1.42089248883298 -1.2528565075449 -1.42089248883298 -1.76190668615289 -1.53950612268338 -1.41595025408921 -1.55433282691468 -1.55433282691468 1.78167562512796 1.82615573782186 0.575770347648841 0.0815468732721535 0.234756150328926 1.15895404741333 1.2973366202388 1.40606578460168 1.81627126833433 0.0518934648095522 0.061777934297086 -0.0222400563469509 -0.145795924941123 0.130969220709822 0.180391568147491 0.259467324047761 -0.130969220709822 0.160622629172424
MMP0724 -0.409423821044692 -0.615105930195106 -1.63893088646273 -0.916902900872057 -1.14979066021569 -1.48781961716115 -1.18962748934109 -0.901190130487866 -1.08425264462485 0.766456916173712 0.626748313731922 0.665556258854641 0.766456916173712 0.413304615556964 -1.60082773631218 -1.43007277777222 -1.50768866801766 -1.73277474972943 -1.58142376375082 -1.37186086008814 -1.69784759911898 -1.6396356814349 0.859595984468239 1.22827146313408 1.0031853814223 0.74317214910008 0.700483409465089 0.941092669225951 1.01482776495912 1.26319861374452 0.913927107640047 0.490920505802403 0.0873178765261192 -0.16881456128383 -0.22702647896791 -0.254192040553813 -0.312403958237893 -0.339569519823797 -0.467635738728771 0.553013217998754
MMP0726 -0.71881665564317 -0.73172952969664 -1.80003994389877 -0.812376759773139 -0.914349988735164 -1.02876213331711 -1.19370739439546 -0.615686342775835 0.257435124685307 0.180780236748582 0.31421326863444 0.383081930252947 0.602600789161939 0.111911575130074 -0.447646300520297 0.00860858270231342 -0.649947994024663 -0.985682719414886 -1.00720417617067 -0.477776339978394 -0.120520157832388 0.318517559985596 1.49789339020253 1.9584525647763 1.60980496533261 1.26976594859123 1.30420027940048 2.18658000638761 2.3458387863804 1.56676205182104 1.46776335074444 0.568166458352685 -0.206605984855522 -0.31421326863444 -0.34003901674138 -0.383081930252947 -0.322821851336753 -0.598296497810782 -0.74464240375011 0.856553978880185
MMP0734 -0.350225993193299 -0.583709988655499 -1.26978995590649 -0.401449351694298 -0.591142609207844 -0.831285371056363 -0.947725323513866 -1.14928905263564 1.37217088749563 0.500693456935605 0.739365985630298 0.614841188050459 0.786062784722738 0.428053991680699 -0.718611852700325 -1.31529317443706 -1.06105504604488 -1.42425237231942 -0.874267849675124 -0.806816917652711 -1.00916971371995 -0.978038514324991 0.692669186537858 1.57990836929422 1.07143211250987 0.692669186537858 0.962472914627511 1.87046623031384 1.70443316687406 1.73556436626902 0.765308651792765 0.568144388958019 -0.16343879682354 -0.360603059658286 -0.500693456935605 -0.246455328543433 -0.339848926728312 -0.0492910657086866 -0.158250263591046 0.718611852700325
MMP0753 -0.0374186865226125 -0.23358216675168 -1.64491579406897 -0.0361426185632875 0.0365640390199072 -0.274745932877521 -0.636064804826493 -0.287294290023859 -1.8336947613859 0.305867403878255 0.440729796535738 0.661413711793439 0.379428708964155 0.685934146822073 -1.43508348315472 -0.392964994437797 -1.72932870349832 -1.36152217806882 -1.37378239558313 -0.576868257152547 -0.38070477692348 -0.123240209122829 1.24990415248064 1.29894502253791 1.53188915530992 1.13956219485179 1.04148045473726 1.29894502253791 1.40928698016676 0.91887827959409 1.22538371745201 0.452990014050055 -1.04275652269658 -0.846593042467514 -0.60138869218118 -0.736251084838664 -0.368444559409163 -0.589128474666864 -0.552347822123914 0.649153494279122
MMP0754 0.235343501680188 0.0761405446612372 -1.14917283574561 -0.472598753999466 -0.564802025634188 -0.879647559350656 -0.976330760664686 -0.561259752918649 -0.383104279147214 0.879077197452467 0.906764668238371 0.989827080596084 1.12134256682913 1.2182487145798 -0.816780388184182 -0.366858987913234 -1.23209244997275 -1.03135828677494 -0.858311594363038 -0.560671283414565 -0.110749883143618 0.0830624123577134 1.44667034856351 1.96581042579922 2.37420061989131 2.18038832438998 1.62663890867189 1.70277945333312 1.6820138502437 1.16979564070446 1.48127968704589 0.58835875420047 -0.207656030894284 -0.179968560108379 -0.12459361853657 -0.263030972466092 -0.221499766287236 -0.436077664877995 -0.193812295501331 0.595280621896946
MMP0798 -0.447622001479474 -0.671433002219212 -1.17620695809347 -0.299848177112721 -0.625488325661393 -0.677890189980146 -0.986187820910831 -1.46254571254773 -0.312574344161561 0.0828929632369396 0.273546778681901 0.397886223537311 0.107760852208022 0.696300891190293 -0.406175519861005 -0.721168780161375 -1.17708007796454 -1.0941871147276 -0.928401188253725 -0.978136966195888 0.770904558103539 -0.306703963976677 2.03916689562872 2.37073874857647 2.25468860004476 1.49207333826491 1.31799811546734 1.46720544929383 1.76562011694682 1.84022378386006 2.10548126621827 0.712879483837681 -0.43933270515578 -0.455911297803168 -0.232100297063431 0 0.0663143705895517 -0.232100297063431 -0.165785926473879 0.804061743398315
MMP0826 -0.83966682868279 -0.77279070958416 -1.45709258055727 -0.774851029061351 -0.148866449172586 -0.848108118202416 -1.2275909938495 -0.923378371726027 -1.39982902675884 0.133752238197259 0.163474957796649 0.527578272889186 0.453271473890709 0.393826034691928 0.334380595493146 -0.148613597996954 -0.185766997496192 -0.453271473890709 -0.557300992488577 0 -0.0371533994992384 0.312088555793603 0.913973627681267 1.99142221315918 0.557300992488577 0.750498669884617 1.10717130507731 2.4149709674505 2.52643116594822 2.51156980614852 0.824805468883094 0.237781756795126 -0.780221389484008 -0.698483910585683 -0.520147592989339 -0.735637310084922 -0.683622550785988 -1.02543382617898 -1.16661674427609 0.282365836194213
MMP0827 -0.668098223483029 -0.637637818157055 -1.36582738296391 -1.26765264979902 -1.16883605091173 -1.08970330304122 -1.30540040655657 -1.33966375490431 -0.644982762092325 0.0751356664707358 0.217284224658614 0.239621855230995 0.692466547743808 0.296481278506147 -0.928027015598006 -0.995039907315149 -1.07220626747428 -1.07220626747428 -1.10469736648866 -1.07829834853948 -0.944272565105193 -0.893505222895236 1.33619644696606 1.61846286965342 1.47834500515394 1.59206385170424 1.66516882448658 1.61846286965342 1.72608963513852 1.72608963513852 1.32198159114727 0.848829961750474 0.125903008680692 -0.180731738267445 -0.249775323672986 -0.320849602766926 -0.475182323085194 -0.629515043403462 -0.751356664707358 0.907720078714024
MMP0846 -1.41191270863575 -1.01646575671016 -1.93608326321558 -1.20272120980068 -0.97352461220491 -1.15569147799305 -1.7268386742348 -1.77101811909743 -1.17279319966304 0.258989905134368 0.587600752509158 0.632158155543028 0.465067894166016 -0.0250635392065518 -0.364813737339809 -0.292407957409771 -0.27569893127207 -0.737981987748469 -0.119748020653525 0.0139241884480842 -0.409371140373679 -0.79924841692004 0.476207244924484 1.42862173477345 0.726842636990001 0.654436857059963 0.977478029055519 1.81849901131981 2.10812213103997 2.38103622462242 0.47063756954525 0.960769002917818 -0.242280878996667 -0.431649841890614 -0.504055621820652 -0.348104711202108 -0.47063756954525 -0.576461401750691 -0.437219517269848 0.938490301400883
MMP0944 -0.392942298055358 -0.553171196291523 -0.984846785669534 -0.445203509247507 -0.634233696910626 -1.01562448329634 -1.21946931281121 -0.906179913087645 -2.38040864190552 0.797329517413298 1.04148783853507 1.25512636951663 1.06437768114024 1.24749642198157 -0.492131616011079 -0.392942298055358 -0.942298520579353 -1.17119694663102 -0.850739150158687 -0.438721983265691 -0.461611825870857 -0.27086313749447 0.560801143826578 1.07963757621035 1.19408678923618 0.522651406151301 0.698140199457577 1.28564615965685 1.34668573993729 1.33905579240224 0.553171196291523 0.408202193125469 -0.232713399819192 -0.20219360967897 -0.0343347639077497 -0.103004291723249 0.0343347639077497 -0.293752980099636 -0.522651406151301 0.392942298055358
MMP0972 -0.55882954789181 -0.329348212635858 -1.88224334697455 -0.782579905523823 -0.639493172158236 -0.67179482467027 -1.19712846093449 -1.2736929748499 -1.03939404868018 0.864804661566414 0.97954532919439 0.813808809287313 0.809559154930722 0.461087497690201 -0.648072289380237 -0.320848903922674 -0.439839225907243 -0.843556389783455 -0.83080742671368 -0.788310883147763 -0.694818487302745 -0.690568832946154 1.04329014454327 1.76148173080727 1.25152320801626 1.49800316069858 1.67648864367543 1.68923760674521 1.65099071753588 1.88472170714843 1.01354256404712 0.85630535285323 0.0786186055969467 -0.38459371927155 -0.490835078186343 -0.635323326310461 -0.68206952423297 -0.703317796015929 -0.711817104729112 0.958297057411431
MMP1276 -0.551860425052598 -0.786322755471842 -1.71966326884222 -1.38514255629583 0.0145509178418299 -0.870054177373493 -1.24015907173012 -0.181015030271656 -1.46042809797701 0.307834786484631 0.258988467647288 0.434835215461721 0.219911412577414 0.571604908206281 -0.190397665656263 -0.776553491704373 -0.737476436634499 -0.825399810541716 -0.884015393146527 -0.0731665004466409 -0.180628401888794 -0.415090732308039 0.874452084997804 2.26168753997833 0.591143435741217 0.659528282113497 0.893990612532741 2.22261048490846 2.12491784723377 2.0858407921639 1.08937588788211 0.190603621275009 -0.727707172867031 -0.542091161285129 -0.327167358400822 -0.483475578680318 -0.229474720726137 -0.844938338076653 -1.00124655835615 0.24921920387982
MMP1632 -0.241466438264836 -0.516686249620455 -1.89518154663232 -1.04003485945658 -1.0194006643335 -0.989387289609011 -1.12241532028889 -0.88981166617413 1.02557309693517 0.334937317593159 0.859412807157641 0.906148246821803 1.04116173918494 0.869798460416343 -0.890569766933749 -0.869798460416343 -0.739977794682561 -1.05674021907299 -0.916533900080505 -0.963269339744667 -0.599771475690076 -1.07231869896104 0.542650382767211 0.786713234346722 0.973654993003369 0.947690859856613 1.22291067121223 1.73180768088866 1.61756549504293 1.54486592223201 0.553036036025914 0.17915251871262 -0.589385822431373 -0.906148246821802 -0.781520407717371 -0.532264729508509 -0.329744490963808 -0.153188385565864 -0.267430571411592 0.189538171971323
Unanno_37 -0.617705526121543 -1.48466065050266 -1.72047137689582 -1.20931856395113 -1.22550744998288 -1.40003748862922 -1.29201644335979 -1.42646166311483 -0.767325318795927 0.761294968597165 0.788387316234075 0.77484114241562 0.953650636819225 0.883210532963259 -0.696273334268582 -0.980742984456134 -1.03221844496626 -1.24082952177047 -1.23541105224309 -1.2001910003151 -1.24082952177047 -0.869664359144804 1.09453084453116 0.948232167291843 0.864245889617422 0.915721350127551 1.04034614925734 1.48195141573897 1.50904376337588 1.72578254447115 1.02409074067519 0.287178884951244 -0.0975324514928753 -0.47140684888223 -0.601450117539397 -0.531010013683432 -0.658344047576908 -0.606868587066779 -0.788387316234075 0.330526641170299
Unanno_44 -0.888430324794103 -0.0782555208367864 -1.54488753757903 -0.848008383778643 -0.788145234987797 -1.13810910284408 -1.42703195663601 -1.84593545367719 -1.45051993231797 1.04494136646768 1.15541974882549 1.0219250368098 0.718109485325803 -0.391277604183931 -1.47764836403579 -1.63415940570936 -1.24288180152543 -0.823984601752044 -0.0506359252473323 -0.248576360305086 0.0552391911789078 -1.42701243878846 0.561598443652231 0.911446654451981 0.773348676504711 1.06335443019398 1.21986547186755 1.87813250008287 1.77686064958821 1.62034960791463 0.506359252473323 1.00351197308349 -0.598424571104836 -0.561598443652231 -0.487946188747021 -0.529375582131201 -0.667473560078471 -1.0587511642624 -1.06335443019398 1.10478382357816
Unanno_58 -0.841496181211375 -1.00151840583518 -1.36713762057825 -1.08619263566738 -1.10321876493236 -1.01703609387675 -1.41331580781075 -1.78913648167832 -1.57230940773533 0.841496181211375 0.89115825092221 0.973928367106935 1.02542977273299 1.17257664595028 -1.11739656849379 -1.16705863820463 -1.08980652976555 -1.40433297126751 -1.41169031492837 -1.50365711068918 -1.44847703323269 -1.34915289381102 0.280498727070458 0.1940499390553 0.742172041789704 0.718260674891894 0.894836922752642 0.946338328378693 0.887479579091777 1.23511406706762 0.302570758053051 0.240033336935703 -0.201407282716165 -0.495701029150744 -0.543523762946363 -0.287856070731323 -0.385340874237777 -0.0211523630249855 0.0211523630249853 0.195889274970516
[+] Show/hide bicluster #154 motif PSSM #1. bicluster 154 motif PSSM #1 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0.73913 0 0.26087 0
2 0 0.347826 0 0.652174
3 0 1 0 0
4 0.086957 0.782609 0.086957 0.043478
5 0 1 0 0
6 0 0.826087 0 0.173913
7 0 0.608696 0.173913 0.217391 [+] Show/hide bicluster #154 motif PSSM #2. bicluster 154 motif PSSM #2 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 0 0 1 0
4 0 0 0 1
5 0 0 1 0
6 0 0 1 0
7 0 1 0 0 |