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bicluster 151
Methanococcus maripaludis S2
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bicluster 151 genes
Methanococcus maripaludis S2
25
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bicluster 151 short names
Methanococcus maripaludis S2
25
short_name
[+] Show/hide bicluster #151 rows (long gene names).
bicluster 151 long names
Methanococcus maripaludis S2
25
long_name
[+] Show/hide bicluster #151 rows (NCBI RefSeq gene IDs).
bicluster 151 NCBI RefSeq IDs
Methanococcus maripaludis S2
42
[+] Show/hide bicluster #151 gene upstream sequences.
bicluster 151 upstream sequences
Methanococcus maripaludis S2
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upstream
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bicluster 151 arrays
Methanococcus maripaludis S2
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[+] Show/hide bicluster #151 ratios.
bicluster 151 ratios
Methanococcus maripaludis S2
25x39
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_minus30m
Antisense_21 -0.341720202218857 1.02604790757022 0.309645543436979 -0.220418717822885 -0.887738335032844 3.08032248190283 -0.0683440404437714 -0.497935151804621 -0.0195268686982204 0.566279192248392 0.92752626316547 -0.839655354023478 -1.13255838449678 -0.93728969751458 -0.419827677011739 -0.146451515236653 0.214795555680425 0.673676970088604 1.68907414239607 0.781074747928817 0.351483636567967 0.92752626316547 1.02516060665657 2.58731010251421 1.92339656677471 2.09913838505869 2.56778323381598 0.732257576183265 -0.244085858727755 -0.517462020502841 -0.888472525769029 -0.986106869260131 -0.683440404437715 -0.790838182277927 -0.4784082831064 -0.156214949585763 -0.214795555680425 -0.292903030473306 -0.0390537373964408
MMP0009 -0.49589985743579 0.0898376651444645 -0.940408077828326 -0.517863861258936 -0.235420522167813 0.00443216732660688 -0.00443216732660693 -0.183147691002674 0.0402467135924097 0.650858086152304 1.17211169687416 -0.972474587238634 0.233855197574815 0.114711515124104 0.293427038800171 0.263641118187493 0.144497435736782 0.0104607929797319 1.02318209381078 0.0700326342050874 0.189176316655799 0.0104607929797319 -0.0937899291646403 0.531714403701593 0.635965125845965 0.635965125845965 2.66140772750805 -0.0491110482456236 -0.525685778048468 -0.302291373453385 -0.391649135291418 -0.346970254372401 -0.317184333759723 -0.36186321467874 -0.406542095597757 -0.793759063562568 -0.644829460499179 -0.585257619273823 -0.466113936823112
MMP0063 -0.256841415579787 1.40956760562917 -1.27724833394276 0.0135949082941878 -0.0622447483685738 1.47442358787871 0.43814860523621 0.194902097950611 0.942016370327808 -1.03870518899778 -0.830208182752985 -0.204717164018587 0.299150601073011 0.45552335575661 0.36864960315461 -0.413214170263386 -0.517462673385786 -0.378464669222587 0.50764760731781 0.45552335575661 1.7933791458274 1.46325888593981 1.20263762813381 1.39375988385821 1.42850938489901 1.6196316406234 0.768268865123809 -0.117843411416587 -0.0135949082941883 -0.621711176508186 -0.274216166100187 -0.169967662977787 0.0906535948282114 -0.204717164018587 -0.847582933273385 -0.934456685875384 -1.26457694576298 -0.847582933273385 0.299150601073011
MMP0090 -0.445270043519561 -0.78420074719999 -0.256540231548284 0.0384189178890305 -0.747458428895423 0.222895982852612 0.131102384457024 -0.0723231783582413 -0.513078564457982 0.351480077506894 0.741379072902819 -0.0384189178890305 0.283671556568473 0.0971981239878128 -0.360509392346534 0.571857770556765 0.9956610264219 0.690522682199003 2.14840588237507 -0.0553710481236359 -0.343557262111928 0.402336468210711 0.605762031025976 1.63984197533691 2.31792718472112 1.9449803195598 2.80953896152468 0.605762031025976 0.0463417332839966 -0.530030694692588 -0.733456257507853 -0.919929690088513 -1.24202016454602 -0.81821690868088 -0.275748741173506 -0.902977559853907 -0.309653001642717 -1.24202016454602 -0.190988090000479
MMP0369 0.0452736891599961 -0.205389722921254 -0.401779842309168 -0.329820102248606 -0.416362588134981 -0.716058546473474 -0.226368445799981 0.0543284269919954 0.670050599567943 -2.06448022569582 -2.43572447680779 -1.67512649891986 -2.08258970135982 -2.01920653653583 -1.58457912059987 -2.07353496352782 -0.986966423687916 1.1408969668319 0.271642134959977 0.94169273452792 0.144875805311988 0 0.642886386071945 0.271642134959977 0.199204232303983 0.778707453551934 0.534229532087955 1.1771159181599 0.579503221247951 0.833035880543929 0.70626955089594 0.814926404879931 0.887364307535925 0.461791629431961 0.335025299783972 0.434627415935963 -0.253532659295978 -0.217313707967982 0.597612696911949
MMP0475 -0.493138465328972 -1.00324175685757 -0.235221924801196 -0.350888812086851 0.077140499474992 1.18082106890374 -0.0821897442214953 -0.0136982907035825 -0.191776069850156 0.410948721107476 -0.246569232664486 -0.75340598869704 -0.726009407289875 -0.739707697993458 -0.780802570104205 -0.191776069850156 0.69861282588271 0.876690605029283 2.5889769429771 1.27394103543318 0.616423081661215 1.01367351206511 1.1780530005081 2.34240771031262 2.54788207086635 2.08214018694455 2.53418378016277 0.739707697993458 0.205474360553738 -0.602724790957632 -1.01367351206511 -1.32873419824751 -1.39722565176542 -0.876690605029283 -0.369853848996729 -0.80819915151137 -0.383552139700311 -1.24654445402601 -0.0547931628143302
MMP0515 -0.150873818127749 -0.735072301868602 -0.923142221938327 0.516593942060651 -0.42313634869616 1.63221399982332 -0.397758247791338 -0.356610842847406 -0.205737024719658 0.19202122307168 -0.329179239551452 -1.20699054502199 -1.13841153678211 -0.836663900526607 -0.781800693934699 0.0548632065919087 0.589779470863018 0.946390313710425 2.55113910652375 0.781800693934699 0.425189851087292 0.864095503822562 1.20699054502199 1.81048581753299 2.38654948674803 1.48130657798153 2.77059193289139 1.06983252854222 0.246884429663589 -0.425189851087292 -0.644642677454927 -1.06983252854222 -1.11097993348615 -0.425189851087292 0 -0.411474049439315 0 -0.932674512062448 -0.0137158016479771
MMP0585 0.359242870494456 -1.29655173043709 0.57684342009869 -0.405093924188078 -0.51819335122581 2.10661457426907 -0.341280726969734 -0.0299369058745381 0.107772861148337 0.209558341121766 -0.514914781042054 -0.101785479973429 -0.652624548064929 -0.646637166890022 -0.143697148197782 -0.0718485740988914 0.245482628171212 0.395167157543902 1.4968452937269 1.67047934779922 1.74232792189811 1.20945099733134 1.09569075500809 1.76627744659774 1.8860250700959 2.09558341121766 1.55073172430107 0.431091444593348 0.0898107176236142 -0.832245983312158 -1.04180432443392 -1.13161504205754 -1.37111028905384 -1.32321123965458 -1.19747623498152 -0.940018844460494 -0.910081938585956 -0.311343821095196 0.221533103471582
MMP0598 -0.951643776900402 -1.1702428795479 -0.826474898908543 -1.47613812612588 -2.25787041218323 -0.873411206584529 0.188178147974656 0.435497999598489 0.489263184734105 -0.650558740140953 -0.112906888784793 -0.381732814462873 0.166672073920409 -0.177425110947533 -0.521522295815475 -0.467757110679859 -0.618299629059583 -0.241943333110272 0.715076962303692 0.919384665819032 1.43553044312095 1.2742348877141 0.822607332574924 1.46778955420231 1.32800007284971 0.994655925008895 1.56456688744642 -0.209684222028902 0.33872066635438 0.112906888784793 0.177425110947533 0.0483886666220544 0.241943333110272 0.0483886666220544 -0.0806477777034239 -0.413991925544243 -0.586040517978214 -0.962396813927525 0.360226740408627
MMP0614 -0.547147198930722 -2.15822244594358 -0.0454716201453799 -1.16933441399585 -1.55415154465574 2.90022967480582 0.547147198930722 0.845591125620206 0.845591125620206 0.170539386679705 -0.213174233349632 -0.511618160039116 -0.625311084492253 -0.724792393388748 -0.497406544482474 0.0497406544482475 0.390819427807658 0.156327771123063 0.660840123383858 -0.00710580777832107 -0.0781638855615316 0.611099468935611 1.00902470452159 1.57038351900895 1.65565321234881 1.40694994010757 1.42826736344253 0.241597464462916 -0.0284232311132842 -0.753215624502032 -1.03034212785655 -1.51353705678239 -1.57038351900895 -1.53485448011735 -1.42826736344253 -1.46379640233414 -1.23641055342786 -0.952178242295022 0.0426348466699264
MMP0725 -0.134389520759415 -1.08548916731071 0.352607975847966 -0.23205871764557 -1.53137667579688 2.0504983629815 0.169447656609698 0.239563928310263 0.0409011584919961 -0.274622064160545 -0.0759592943422784 -0.0525872037754235 -0.391482516994819 -0.601831332096513 -0.333052290577682 0.0876453396257057 0.344738335861109 0.0409011584919961 0.70700573964736 0.0759592943422782 -0.999156871733046 0.414854607561674 0.0292151132085686 0.648575513230223 1.09264523400047 0.578459241529658 1.12770336985075 0.0175290679251412 -0.449912743411956 -0.765435966064497 -0.917354554749054 -1.34973823023587 -1.46659868307014 -1.20950568683474 -1.0225289622999 -1.13938941513418 -0.520029015112521 -0.730377830214215 -0.134389520759415
MMP0769 -0.457110111414912 0.0275644641947222 0.0831252667675436 -0.0581134089315914 -0.020726700658291 0.324321469738764 0.0948719099163024 -0.0258741572499007 -0.733101122080519 -0.00862471908330023 -0.301865167915508 -1.73356853574334 -0.922844941913123 -0.819348312913521 -1.52657527774414 0.250116853415706 0.577856178581115 0.836597751080121 2.61328988223997 0.146620224416104 -0.0431235954165011 0.560606740414514 0.922844941913123 1.94056179374255 2.49254381507376 1.50932583957754 2.95827864557197 0.750350560247119 0.129370786249503 -0.319114606082108 -0.560606740414514 -0.819348312913521 -0.991842694579525 -0.664103369414117 -0.163869662582704 -0.543357302247914 -0.00862471908330023 -1.14708763807893 0.00862471908330023
MMP0886 0.478042025195526 1.56207355630124 0.790585820373044 0.0162267125908048 -0.721196004586391 -0.459639342179214 -0.163640195790237 -0.545180975835825 -0.371753348542376 0.243914728349369 0.824897279782424 -0.4584671621891 -2.06267271465351 -2.17540067239425 -1.03077833225748 -0.649237552211895 0.70349794067701 0.729512084771027 2.24700382358871 2.03889067083657 0.694826559312337 1.03301043253456 1.52727917032089 1.82210613671976 1.57063607714426 1.65734989079098 0.816225898417752 0.781540372959062 0.0444729569619026 -0.345739204448358 -0.285039534895651 -0.545180975835825 -0.753294128587964 -0.605880645388532 -1.14350628999823 -0.883364849058051 -0.536509594471153 0.0791584824205924 0.426013737007491
MMP0939 0.293303171773815 1.54869844712942 1.98986579284979 0.577704302209605 0.0074083013177177 2.71511616933415 -0.750342528955622 -0.361186504954815 -0.520386696591509 1.28388214195769 -2.44847790641369 -0.856475990046751 -0.431942145682234 -0.768031439137477 -0.148919582772557 -1.08643182241086 -0.538075606773364 0.222547531046395 0.417125543046799 0.452503363410509 1.33694887250325 1.24850432159398 0.788592656865751 0.576325734683493 1.3192599623214 0.417125543046799 0.151791890318976 0.24023644122825 -0.555764516955218 -0.591142337318928 -0.92723163077417 -0.166608492954412 0.0456584292278468 -0.290430864227396 -0.255053043863686 0.434814453228654 0.364058812501234 0.594014644865348 0.0102806088641371
MMP1056 -0.134063747074009 0.207596767513885 0.240074706144685 -0.0772098272311764 0.0992088326716352 2.85752800073541 -0.00638398795590519 -0.312815409839354 0.287279458015734 0.861838374047201 -1.05335801272436 -1.16826979593065 -0.759694566752717 -0.606478855810993 -0.542638976251941 -0.440495168957458 -0.070223867514957 1.4747012178141 1.8449725192566 1.15550182001884 0.874606349959011 0.989518133165304 0.683086711281855 2.828106664466 2.75149880899514 2.41953143528807 1.7172927601385 1.41086133825505 -0.197903626633061 0.00638398795590519 -0.606478855810993 -0.632014807634614 -0.555406952163751 -0.593710879899183 -0.593710879899183 -0.248975530280302 -0.414959217133837 0.0702238675149571 0.0702238675149571
MMP1179 0.635827838250313 -0.123885854624307 -1.69466854620676 -0.992856614328952 -0.427366340526107 -0.485850675247344 -0.409755717983535 -0.353237687916841 0.113036060133389 -0.0282590150333473 -0.579309808183619 -1.4977277967674 -0.918417988583786 -0.81951143596707 -0.635827838250313 0.353237687916841 0.438014733016882 1.27165567650063 2.75525396575136 1.04558355623385 0.565180300666945 0.777122913417049 0.918417988583786 1.89335400723427 2.19007366508441 1.85096548468424 2.48679332293456 1.27165567650063 0.31084916536682 -0.226072120266778 -0.692345868317008 -1.00319503368383 -0.81951143596707 -0.423885225500209 0.127165567650063 -0.31084916536682 0.0706475375833681 -0.890158973550438 0.197813105233431
MMP1262 0.723201564912297 -0.654561224383701 0.851266315627438 -0.263654868114177 -0.345920530926163 -2.52432278709981 -0.50560109405373 -0.73600159260986 -1.01760220195624 1.20960261741968 2.3744051378979 0.224000484707349 -0.672001454122046 -0.748801620307423 0.0064000138487814 0.198400429312223 -0.761601648004986 0.953602063468427 0.940802035770865 0.288000623195163 0.50560109405373 0.928002008073302 0.659201426424483 1.580803420649 1.0304022296538 1.51680328216119 1.81120391920513 1.04320225735137 -0.339200733985414 -0.0192000415463442 -0.134400290824409 -0.41600090017079 -0.403200872473228 -0.518401121751293 -0.403200872473228 0.160000346219535 0.467201010961042 1.38880300518556 0.0960002077317209
MMP1343 -0.626066565795467 -0.222219181143283 0.495880084844483 -0.407542927166164 -0.340372132951046 1.03469616793697 0.385271732797211 0.224741844131706 0.0160529888665502 0.674225532395119 -0.224741844131706 -1.83004073078675 -1.02739128745923 -1.10765623179198 -0.417377710530312 -0.321059777331009 0.288953799597908 0.577907599195816 0.947126343126476 0.0642119554662016 0.786596454460971 1.17186818725818 1.07555025405888 1.9103056751195 1.04344427632578 1.8781996973864 2.90559098484563 0.481589665996513 0.240794832998257 0.850808409927173 0.144476899798954 0 -0.610013576928917 -1.22002715385783 -0.658172543528568 -0.610013576928917 -0.754490476727871 -0.545801621462715 0.593960588062366
MMP1388 -0.143622403358572 -0.301577108310192 2.1928657630934 -1.3284000756973 -1.33842266066302 1.31579189577366 -0.117509239111559 -0.130565821235065 -0.861734420151432 0.927017330768964 0.809508091657405 -0.104452656988052 -0.652829106175327 -0.430867210075716 -0.770338345286886 -0.0391697463705196 0.417810627952209 1.2012055553626 1.64512934756182 0.0783394927410393 -0.156678985482078 0.169735567605585 0.365584299458183 1.33177137659767 1.82792149729092 1.33177137659767 1.41011086933871 1.22731871960961 -0.391697463705196 -0.600602777681301 -0.417810627952209 -0.731168598916366 -1.01841340563351 -0.835621255904418 -0.404754045828703 -0.613659359804807 0.208905313976105 0.0391697463705196 -0.470036956446235
MMP1525 -0.145257700792851 0.549603276485415 -0.13443793464276 -0.315429370870472 -0.816197728322282 -0.931979016497296 -0.119995491959312 -0.00631555220838485 0.562084146546251 0.536821937712712 -0.574715250963021 -0.978910592299651 -0.915755070215803 -0.789444026048106 -0.536821937712712 -0.410510893545015 0.486297520045633 1.4588925601369 1.68625243963875 1.62309691755491 0.738919608381027 -0.0694710742922333 -0.0442088654586939 2.8356829415648 2.8356829415648 2.78515852389772 1.78730127497291 1.73677685730583 -0.284199849377318 -0.397879789128245 -0.334724267044397 -0.309462058210857 0.00631555220838485 -0.0442088654586939 0.0315777610419242 0.170519909626391 0.0442088654586939 0.372617580294706 -0.359986475877936
MMP1526 -0.358851658128715 0.724802454686746 -0.231339813916383 0.226926720020566 -1.27630274828892 0.490748047593839 -0.135566181959737 -0.326953732961718 -0.964912236301655 -0.518341283963699 -1.34768733830562 -2.00159480422905 -0.725677797549178 -0.215310994877229 -0.853269498217166 0.183413069710232 0.741626760132677 0.326953732961718 1.93779895389506 0.279106845211222 0.358851658128715 0.837320535633667 1.09250393696964 2.511961606901 2.25677820556503 1.87400310356106 2.28867613073202 0.374800620712213 0.119617219376238 -0.342902695545216 -0.677830909798683 -0.661881947215185 -0.773524685299674 -0.5023923213802 -0.167464107126734 -0.693779872382182 -0.422647508462708 -1.07655497438614 -0.0717703316257429
MMP1679 -0.358633363319467 0.259255852129459 0.178286301109414 -0.60549894379878 -0.999010952790361 0.461004978938152 -0.206214183908693 -0.0986241749128534 0.10759000899584 0.815890901551786 0.179316681659733 -0.286906690655573 -0.627608385809066 -0.502086708647253 -0.358633363319467 -0.502086708647253 -0.502086708647253 0.0986241749128532 1.33590927836501 2.60905771814912 1.93662016192512 1.18349009895424 1.00417341729451 0.86072007196672 0.69933505847296 0.977275915045546 0.654505888058026 0.197248349825707 0.16138501349376 -0.170350847576746 -0.609676717643093 -0.88761757421568 -0.905549242381653 -0.672437556224 -0.636574219892053 -0.34966752923648 -0.34966752923648 -0.05379500449792 0.206214183908693
RNA_23 0.440592197771545 -0.754494162681584 -0.986149632013296 -0.904997156732693 -1.11945549860996 -1.01941989888734 -0.358447889712444 -0.597413149520739 0.201626937963249 1.08281133350634 -0.089611972428111 0.0149353287380185 -0.664622128841822 0.224029931070277 -0.126950294273157 -0.567542492044702 0.09707963679712 1.72503046924113 0.933458046126155 1.47112988069482 0.313641903498388 0.821443080591017 1.31430892894563 2.24029931070277 2.30004062565485 2.59127953604621 1.82957777040726 1.72503046924113 -0.350980225343434 -0.238965259808296 -0.470462855247582 -0.560074827675693 0.0373383218450462 -1.06787600476832 -1.15748797719643 -0.29870657476037 -1.10521432661337 0.619816142627767 0.0224029931070277
RNA_47 0.529161637513167 -1.07374866569816 -0.94243913607416 -1.02553008432803 -0.724702108150109 -0.890561108796482 -0.0786591623330384 0.221675821120381 0.350390814028989 0.0429049976362028 -1.28714992908608 -0.865250785663422 -1.0225691103295 -0.67217829630051 -0.47195497399823 -1.03687077620823 -0.0286033317574685 1.99508239008343 1.82346239953862 1.42301575493406 0.665027463361143 0.965362446814562 1.59463574547887 1.96647905832596 2.23105987708254 2.07374155241647 1.77340656896305 1.90212156187166 1.0225691103295 0.10011166115114 0.336089148150255 0.235977486999115 0.307485816392787 -0.257429985817217 -0.300334983453419 -0.121564159969241 0.0143016658787343 1.13698243735937 0.586368301028104
Unanno_43 -1.02512151543189 -0.723492789023851 -0.94123931560559 -0.506061157804762 -0.793319678507359 -0.901090823719586 -1.82534392288638 -1.89856688827437 -2.00840133635636 1.1767976580213 0.627625417611361 0.486409698648805 0.146445930775984 0.0679927535745642 0.2615105906714 0.0418416945074241 -1.03558193905875 0.465488851395093 0.638085841238217 0.230129319790832 0.444568004141381 0.549172240409941 0.747920289320205 -0.0418416945074241 -0.20920847253712 -0.0993740244551321 -0.716539018439637 0.444568004141381 0.434107580514525 0.198748048910264 0.28766164973854 0.282431437925112 0.308582496992253 0.376575250566817 0.334733556059393 0.721769230253065 0.653776476678501 0.899596431909618 0.470719063208521
[+] Show/hide bicluster #151 motif PSSM #1. bicluster 151 motif PSSM #1 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 0.916667 0 0.083333
2 0.166667 0 0.833333 0
3 0.333333 0 0.666667 0
4 0.416667 0 0.5 0.083333
5 0 0.083333 0.916667 0
6 0 0 0.916667 0.083333
7 0 0.333333 0.666667 0
8 0.916667 0.083333 0 0 [+] Show/hide bicluster #151 motif PSSM #2. bicluster 151 motif PSSM #2 Methanococcus maripaludis S2 10x4
POSITION A C G T
1 0 0.2 0.8 0
2 0 0.4 0.6 0
3 0 0.8 0.2 0
4 0 0.2 0.8 0
5 0 0 1 0
6 0.2 0.6 0 0.2
7 0 0 0 1
8 0.2 0 0.8 0
9 0.4 0 0.6 0
10 1 0 0 0 |