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[+] Show/hide bicluster #138 rows and columns.
bicluster 138
Methanococcus maripaludis S2
14x40
[+] Show/hide bicluster #138 rows (genes).
bicluster 138 genes
Methanococcus maripaludis S2
14
[+] Show/hide bicluster #138 rows (short gene names).
bicluster 138 short names
Methanococcus maripaludis S2
14
short_name
[+] Show/hide bicluster #138 rows (long gene names).
bicluster 138 long names
Methanococcus maripaludis S2
14
long_name
[+] Show/hide bicluster #138 rows (NCBI RefSeq gene IDs).
bicluster 138 NCBI RefSeq IDs
Methanococcus maripaludis S2
26
[+] Show/hide bicluster #138 gene upstream sequences.
bicluster 138 upstream sequences
Methanococcus maripaludis S2
14
upstream
[+] Show/hide bicluster #138 columns (arrays; conditions).
bicluster 138 arrays
Methanococcus maripaludis S2
40
[+] Show/hide bicluster #138 ratios.
bicluster 138 ratios
Methanococcus maripaludis S2
14x40
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_minus30m
MMP0060 0.360115999432532 1.19226940867477 0.356536957260404 0.618664501332137 0.682132270486497 0.914826403327866 0.728393776748482 -0.302468965235 -0.0764556499789636 -0.347553813405816 0.406177348197158 0.640671487362528 -0.389427766828203 -0.314054650667906 -0.221931953138653 -0.376865580801487 -0.180057999716266 -0.10049748821373 0.850041254474465 1.28134297472506 1.29809255609401 1.02172446350625 -0.205182371769699 -0.238681534507608 -0.481550464357456 -0.180057999716266 0.0418739534223874 -1.19340767253804 -1.15572111445789 -1.6540211601843 -2.10625985714609 -2.23606911275549 -2.38681534507608 -0.531799208464321 0.372678185459248 1.12640934706222 1.20178246322252 0.829104277763271 0.293117673956712 -0.460613487646262
MMP0061 0.467545720846719 1.17987894517114 0.466275649301152 0.657639853039396 0.732950928382692 0.792150374084332 0.759371535142471 -0.61987054180773 -0.266834445589263 -0.479849555605843 0.467545720846719 0.660305798739664 -0.377317599279808 -0.237874138676401 0.020506391265207 -0.32400098199027 -0.282988199459856 0.020506391265207 0.816154372355237 1.35342182350366 1.34521926699758 1.09094001530901 -0.336304816749394 -0.20506391265207 -0.611090459703167 -0.237874138676401 -0.393722712291974 -1.19347197163505 -1.16066174561071 -1.79225859657909 -2.01782890049636 -2.18188003061802 -2.24339920441364 -0.422431660063263 0.410127825304139 1.08273745880293 1.19757324988809 0.877673546150858 0.336304816749394 -0.426532938316305
MMP0062 0.449705268196514 0.97178537735853 0.180280725133399 0.444295210902486 0.630519715176375 0.648973789239332 0.624525506400337 0.0502266506715773 -0.0625856656367595 -0.481028023195276 0.324414248201465 0.588420326048175 -0.458654626767589 -0.324414248201465 -0.0469841324981432 -0.328888927487003 -0.275192776060553 0.0380347739270684 0.463129306053126 1.10748312317052 1.25514753959325 1.02693889603084 -0.445230588910976 -0.284142134631628 -0.655540515331236 -0.158851114636579 -0.856901083180422 -1.46098278672798 -1.71603950600361 -2.15008339670075 -2.23957698241149 -2.31117185098009 -2.38724139883423 -0.458654626767589 0.293091493202703 0.910597234606871 1.02693889603084 0.574996288191562 0.208072586777492 -0.521300136765113
MMP0150 0.392626024611498 1.18340540847758 -0.598095931954046 0.0728910978130737 0.612225135669892 0.75101890434003 0.86707709047542 1.11273631766626 -1.26424036141186 -0.828877163068717 0.245391265382186 0.572579619225101 -0.381719746150067 -0.261750683074332 0.245391265382186 -0.55076706230224 -0.877955416145154 0.021812556922861 1.05790901075876 1.608676073061 1.49416014921598 1.0360964538359 -0.77979890999228 -0.485329391533657 -1.5377852630617 -0.22903184769004 -0.66528298614726 -0.948846226144452 -1.50506642767741 -1.70683257921387 -1.57595723767671 -1.66866060459886 -1.52142584536955 -0.245391265382186 0.654376707685829 1.47780073152383 1.28148771921808 0.703454960762267 0.141781619998596 -0.212672429997895
MMP0151 0.176058273699534 1.21167903071617 -0.377578958800758 0.22519430218814 0.80288145638211 0.871355932228914 0.887608904349324 -0.101207774699948 -0.517637179420984 -0.509395271903985 0.194837822894151 0.715970313044772 -0.345074216451087 -0.129109400712992 0.523479933799948 -0.401412864034938 -0.434277075125517 -0.190142935595497 1.00705332556133 1.40142385864829 1.25118746509136 0.894376030393633 -0.650241890863613 -0.504700384605331 -1.04461242395057 -0.190142935595497 -0.556344144890528 -1.17137438101423 -1.56105002680254 -2.02584386936931 -2.04462341856392 -2.03053875666796 -1.92255634879891 0.0117372182466356 0.838037382809782 1.51879604111465 1.27466190158463 0.842732270108436 0.274650906971273 0.0821605277264492
MMP0245 0 1.35971610666835 0.52876077740699 0.885349837166821 1.14859258189223 0.970145357314154 1.43351773028423 -0.765770522264091 -0.992265146498164 -0.412551282829449 0.757471207818004 0.872444516147522 -0.10144703676134 -0.0811576294090718 0.00676313578408933 -0.39902501126127 -0.473419504886253 -0.459893233318074 1.35939029260195 1.68402081023824 1.25118012005652 0.703366121545289 -0.831865701442986 -0.879207651931612 -0.811576294090719 -0.162315258818144 -1.02123350339749 -1.34586402103377 -1.25118012005652 -1.90720429111319 -2.02217759944271 -2.04246700679498 -2.08304582149951 0 0.121736444113608 1.12268054015883 0.49370891223852 0.507235183806699 0.541050862727146 0.0338156789204466
MMP0574 -0.0208094629122549 1.2363967499204 -0.742832159834697 0.0208094629122549 0.754063650702029 0.997253031026633 0.702458953467059 0.832459636745398 1.09614705011804 -0.880931453119357 -0.0924862954295134 0.600389752237319 -0.456843527392244 -0.116378572935266 0.624282029743072 -0.630062539308952 -0.761470065590593 -1.05415046503606 0.474955295332116 1.25742738364552 1.80694976627784 1.53816164433812 -0.540466498662379 -0.247786099216907 -1.28112710134072 -0.546439568038817 -0.761470065590593 -1.09596195067113 -0.80328155122566 -1.00039284064812 -1.58575363953907 -1.90232631649029 -1.72910730457358 -0.373220556122109 0.439116879073487 0.952800845447173 1.46648481182086 1.05434302484662 0.212140242768835 -0.23583996046403
MMP0575 -0.322248994358715 0.81400949618916 -0.334567827817336 0.204674818566143 0.318039405196545 0.535733658128083 0.464880790694256 0.750384566282467 0.913013302811668 -0.593949126857239 -0.0315930386626191 0.600267734589763 -0.290655955696096 -0.132690762383 0.581311911392191 -0.568674695927144 -0.770870143367906 -1.06784470679653 0.587630519124715 1.47223560167805 2.03459168987267 1.66179383365376 -0.518125834066953 -0.404390894881524 -1.20685407691205 -0.574993303659667 -0.846693436158192 -1.18157964598195 -0.985702806273716 -1.15630521505186 -1.61124497179357 -1.77552877283919 -1.82607763469938 -0.252744309300953 0.549718872729572 1.18157964598195 1.459598386213 1.14998660731933 0.208514055173286 -0.284337347963572
MMP0576 -0.00402653484073792 0.738556860999806 -0.307058903406017 0.00402653484073793 0.306724184793233 0.401201982425048 0.34304052964527 0.274832166217587 0.407377607581112 -0.97159836000443 0.112327039071352 0.675723291698312 -0.340839511954681 -0.0101504071519005 0.626732313209011 -0.696024106002113 -0.849120913781178 -0.891988019959316 0.455263888496458 1.3983402244155 2.01072745553176 1.46570281983829 -0.530679553600722 -0.493936319733747 -1.26554423094024 -0.683776361379787 -1.10632355085001 -1.54111848494255 -1.30228746480721 -1.38189780485232 -1.85343597281185 -1.84118822818952 -1.85343597281185 -0.402078235066307 0.449140016185295 1.09827048116853 1.12276597041318 0.865563333344352 0.0817076775155386 -0.24285755497608
MMP0577 0.162498515415874 0.9351763742975 -0.226962994524866 0.484234772797262 0.636511361230145 0.851383491216977 0.687964716615985 0.0974286992446412 0.0425330354928667 -0.80647411354545 0.0180553906017638 0.794437186477608 -0.306941640229985 -0.0361107812035276 0.565735572188599 -0.511569400383308 -0.601846353392127 -0.680086379333103 0.571754035722521 1.49257895641247 1.84766830491383 1.52267127408208 -0.451384765044095 -0.33101549436567 -1.23980348798778 -0.716197160536631 -0.993046483097009 -1.71526210716756 -1.34813583159836 -1.60692976355698 -1.8958160131852 -1.64304054476051 -1.51063434701424 -0.397218593238804 0.505550936849387 1.20971117031818 1.14952653497896 0.788418722943686 0.108332343610583 -0.312960103763906
MMP0578 0.0133960017913124 0.917252365324251 -0.245614585440897 0.359476800667878 0.68752867537495 0.640481698282498 0.650697614277903 0.11382434919525 -0.92819906447471 -0.468860062695933 0.0223266696521873 0.593889412748182 -0.250058700104497 -0.0714453428869992 0.544770739513369 -0.357226714434996 -0.352761380504559 -0.241128032243623 0.500117400208995 1.3351348452008 1.70129222749667 1.35746151485299 -0.317038709061059 -0.267920035826247 -0.875205450365741 -0.656404087774306 -1.28155083803555 -1.67450022391405 -1.54500553993136 -1.88437091864461 -2.0987069473056 -2.10763761516648 -2.12103361695779 -0.111633348260936 0.629612084191681 1.05381880758324 1.04488813972236 0.687661425287368 0.0803760107478742 -0.102702680400061
MMP1147 0.313700859297449 0.984781676064969 -0.152533341163245 0.453863787996771 0.729811577944329 0.571905495608219 0.603945391131295 -0.258838334453755 -1.37531055570599 -0.676697567913069 0.0806659352479155 0.510884256570131 -0.380922472004045 -0.0582587310123834 0.452625525557748 -0.492958493181706 -1.04417571737579 -0.578105869276728 0.398848235392471 0.918695373656815 1.00384274975184 0.793215029937836 -0.483995611487493 -0.367478149462726 -1.37132089921456 -0.546735783346983 -1.66261455427648 -1.15621173855346 -0.999361308904731 -1.55057853309882 -1.84187218816074 -2.14661016576397 -2.3079420362598 -0.286812214214811 0.497439934028812 0.860436642644432 1.10243444838818 1.01728707229316 0.524328579111451 -0.188220515578469
MMP1579 0.186854924025176 0.441944212106523 -0.333605152919642 0.191430654749327 0.248434149171337 0.248365555184471 0.346869792563828 0.890700977002954 0.104450589988168 -0.824896128013581 0.200527235539213 0.619811455303022 -0.419284219763809 -0.186854924025176 0.232429295738633 -0.592466832274948 -0.164067738168447 0.255216481595362 1.0755551724376 1.76372818531081 1.58143069845698 1.0755551724376 -0.232429295738633 -0.177740049682484 -0.587909395103602 -0.387382159564389 -0.610696580960331 -0.988963866182028 -1.22139316192066 -1.69536662774062 -2.15566778204654 -2.48380325838343 -2.51114788141151 -0.337250350679586 0.33269291350824 0.943389494468571 0.952504368811262 0.820338690842235 -0.0638041203988405 -0.314463164822857
Unanno_19 -0.192941029164037 0.740521187702752 -0.257055986047265 -0.024053808109673 0.411384810568341 0.437390343940814 0.20266267628237 -0.172876941357627 0.108253962712161 -0.684250094689418 0.228765918745249 0.380252880615574 -0.262543146780132 -0.0946792160589606 0.15097531670373 -0.217506482440306 -0.197035271376748 0.482608935933362 1.25232647192313 1.72316432638495 1.58805433336547 1.11721647890365 0.0322422925350963 0.0527135035986538 -0.749757970092802 -0.127433153760653 -1.44577914625376 -1.86339185195033 -2.17455426011641 -2.25234486215793 -2.31785273756131 -2.48162242606977 -2.4570569727935 -0.36489920209792 0.347498942913882 0.818336797375706 0.327027731850325 0.0240538081096733 -0.135621638186076 -0.33623950660894
[+] Show/hide bicluster #138 motif PSSM #1. bicluster 138 motif PSSM #1 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0.285714 0.571429 0.142857 0
2 0 0 1 0
3 0.571429 0 0.142857 0.285714
4 0 0 1 0
5 0 0.142857 0.857143 0
6 0.571429 0 0.142857 0.285714
7 0 0 0.857143 0.142857
8 0.571429 0.428571 0 0 [+] Show/hide bicluster #138 motif PSSM #2. bicluster 138 motif PSSM #2 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 0 1 0 0
4 0 0 0 1
5 0 0.5 0.5 0
6 1 0 0 0
7 0 0 0 1
8 0 1 0 0 |