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[+] Show/hide bicluster #135 rows and columns.
bicluster 135
Methanococcus maripaludis S2
16x40
[+] Show/hide bicluster #135 rows (genes).
bicluster 135 genes
Methanococcus maripaludis S2
16
[+] Show/hide bicluster #135 rows (short gene names).
bicluster 135 short names
Methanococcus maripaludis S2
16
short_name
[+] Show/hide bicluster #135 rows (long gene names).
bicluster 135 long names
Methanococcus maripaludis S2
16
long_name
[+] Show/hide bicluster #135 rows (NCBI RefSeq gene IDs).
bicluster 135 NCBI RefSeq IDs
Methanococcus maripaludis S2
30
[+] Show/hide bicluster #135 gene upstream sequences.
bicluster 135 upstream sequences
Methanococcus maripaludis S2
16
upstream
[+] Show/hide bicluster #135 columns (arrays; conditions).
bicluster 135 arrays
Methanococcus maripaludis S2
40
[+] Show/hide bicluster #135 ratios.
bicluster 135 ratios
Methanococcus maripaludis S2
16x40
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
MMP1038 -0.363805099531468 0.941348369496783 0.539098152306729 0.771213396552044 0.585154174906244 0.302424662212942 0.251869593703963 -3.68953135981426 -0.0334307388758646 -0.198617919203666 0.119957357142808 0.0609619355971648 0.0609619355971648 0.340206930913211 0.430666577283197 0.395269324355811 0.178952778688452 0.568322560889698 -0.293010593676696 0.127823413348894 -0.112091300936722 0.198617919203666 -0.182885806791495 -0.210417003512795 -1.55944564285651 -2.48370724707159 -2.67249259601765 -2.60956414636896 -2.34998429156813 -1.93308331264558 -1.90555211592428 -1.53978050234129 -1.36672726580741 -0.16322066627628 0.214350031615838 0.265479396955395 0.198617919203666 0.422800521077111 0.458197774004497 -0.0845601042154223
MMP1039 -0.321823881364506 0.661232200515521 0.316286765119578 0.487220096918444 0.36123681210034 0.230081192952192 0.150484716014633 -4.06209418116989 0 -0.0490917785132297 0.0518190995417424 0.0600010626272807 0.0409098154276914 0.155457298625227 0.305459955193429 0.310914597250455 0.122729446283074 0.463644574847169 -0.294550671079378 0.177275866853329 -0.0136366051425638 0.0545464205702552 -0.147275335539689 -0.174548545824817 -1.30093213060059 -2.38640589994867 -2.7573215598264 -2.6291374714863 -2.32640483732138 -2.02912684521349 -1.78912259470437 -1.37456979837043 -1.10729233757618 -0.150002656568202 0.125456767311587 0.338187807535582 0.218185682281021 0.319096560335993 0.346369770621121 -0.125456767311587
MMP1040 -0.328661167884757 0.497888634351339 0.163302129101875 0.241865042656184 0.157670939585258 0.0552145773671354 -0.0215103797967775 -3.71877729772333 0.0116915039959005 -0.0194858399931674 0.0428688479849683 0.0350745119877014 0.00389716799863349 0.170176335940329 0.310474383891134 0.266306479906621 0.138998991951261 0.388417743863804 -0.492342223827364 0.131204655953994 0.00909339199681146 -0.00389716799863349 -0.146793327948528 -0.203951791928486 -0.869068463695267 -2.50328091112224 -3.24114471886351 -3.25933150285714 -2.7267185430439 -2.25126404721061 -1.95767739131355 -1.48741911947845 -1.17044945558959 -0.188363119933952 0.0818405279713032 0.292287599897511 0.274100815903888 0.310474383891134 0.331259279883846 -0.100027311964926
MMP1041 -0.410770944617647 0.574409356409714 0.223279901881678 0.430268348829806 0.331140798091066 0.185489818209619 0.155861739650316 -3.78304025077595 -0.101675976390507 -0.101675976390507 0.061005585834304 0.082696460797612 0.00948975779644728 0.180305398132498 0.296893851060279 0.201996273095806 0.0962532576496796 0.375523272802271 -0.627679694250727 0.126078210724228 -0.0447374296118229 0.082696460797612 -0.147769085687536 -0.147769085687536 -0.765959022141816 -2.44157911305737 -3.0299440964371 -3.28752323662638 -2.7696535968774 -2.25178395712842 -2.03216384812493 -1.50344877089429 -1.19164244329674 -0.166748601280431 0.0284692733893418 0.280625694837798 0.261646179244904 0.30502792917152 0.345698319727722 -0.172171320021258
MMP1042 -0.358536343565673 0.573058461544178 0.221895468324407 0.409562685226492 0.267447756160516 0.165303933718298 0.12081863640808 -3.7135759148758 -0.0913381559653996 -0.00136325605918507 -0.020448840887776 0.0449874499531073 0.0449874499531073 0.113150252912361 0.249475858830868 0.230390274002277 0.0858851317286594 0.320365173908491 -0.704803382598681 0.115876765030731 -0.020448840887776 0.0231753530061462 -0.205851664936945 -0.186766080108354 -0.571204288798544 -2.06533292966538 -2.77695259255999 -3.33043455258912 -2.91055168636012 -2.59154976851082 -2.29708645972684 -1.75723706028955 -1.31554209711359 -0.167680495279764 0.0504404741898476 0.314912149671751 0.244022834594127 0.344903782973823 0.377621928394264 -0.140415374096062
MMP1043 -0.288017609688906 0.567680633878035 0.289823518322002 0.422259704628512 0.305355903968864 0.155579329453424 0.112474906100029 -3.69431552606717 -0.0477754328867854 0.031395284468459 -0.00682506184096935 0.105105952350928 0.0559655070959486 0.156976422342295 0.326237955998335 0.298937708634457 0.143326298660356 0.288017609688906 -0.708441419092618 0.116026051296479 -0.0887258039326015 0.0259352349956835 -0.156976422342295 -0.233417114961152 -0.339888079680273 -1.66668010156471 -2.51844781931769 -3.4057058586437 -3.07537286554079 -2.70135947665567 -2.3382661867161 -1.73493071997441 -1.32815703425263 -0.200656818124499 0.0177451607865203 0.451819093872171 0.304397758107233 0.394488574408028 0.435438945453844 -0.156976422342295
MMP1044 -0.354006257551665 0.548430246353469 0.228026555954408 0.286239092307377 0.228355173569347 0.117422730957671 0.0511824960696338 -3.8309365922197 -0.0452254690264241 0.0171544882514022 0.0545824626180981 0.0826534433931199 0.0296304797069675 0.219889349404338 0.335292270368317 0.254198325907142 0.135676407079272 0.372720244735013 -0.828093932863145 0.132557409215381 -0.0358684754347502 0.113843422032033 -0.207413357948773 -0.179342377173751 -0.238603336587686 -1.36456156545245 -2.30026092461985 -3.40438616843738 -3.31705422824842 -2.48428179858944 -2.26907094598093 -1.72636531766385 -1.47060749282476 -0.210532355812664 -0.0452254690264241 0.357125255415556 0.407029221237817 0.431981204148948 0.466290180651752 -0.157509392126512
MMP1045 -0.403571017871326 0.693855503182859 0.206801928334117 0.310971752248975 0.180958268910099 0.0533800518275098 0.0407564181857779 -3.86899160177458 -0.0205444739814903 0.0157770086287528 0.0223809145578879 0.0983258327429416 -0.0106386150877876 0.197384421679968 0.332764493227238 0.240309810219346 0.14125122128232 0.355878163979211 -0.93848739813127 0.137949268317752 -0.0865835332728414 0.0752121619909687 -0.221963604820111 -0.215359698890976 -0.132810874776787 -0.753578032115487 -1.62859556772589 -2.88663964722613 -3.51731266345853 -2.82720449386391 -2.57625606855678 -2.06445335904881 -1.60548189697392 -0.205453839997273 -0.126206968847652 0.339368399156373 0.421917223270562 0.445030894022535 0.481352376632778 -0.185642122209868
MMP1046 -0.379916647820788 0.629979652038865 0.404119250013666 0.48323566716822 0.341191671047688 0.176796633815186 0.163062230649453 -3.91908381302951 -0.0190825713517291 -0.0641868309103614 0.0121434544965549 0.147456233172452 0.015613012924142 0.157864908455213 0.334812388262156 0.255012544427652 0.0780650646207099 0.400733998386311 -0.980150255793358 0.123169324179342 -0.0676563893379486 -0.0121434544965549 -0.303586362413872 -0.255012544427652 -0.123169324179342 -0.49788163435875 -1.22301934572446 -2.2881737829937 -3.09311133819391 -3.1486242730353 -2.91616385838696 -2.28470422456611 -1.76774001885563 -0.189090934303497 -0.126638882606929 0.334812388262156 0.376447089393201 0.445838257944943 0.480533842220814 -0.213377843296607
MMP1047 -0.411833344868673 0.766456558394767 0.236564017370873 0.426407189113255 0.251735793761238 0.112110650042324 -0.0010338641256146 -3.97704742945462 0.0159119617470303 -0.0919542460082339 0.00103386412561454 0.153534364745126 0.0233510105577382 0.120058645096941 0.391583926687778 0.339510585012823 0.190729608798665 0.395303451093132 -0.988359627698533 0.101461023070171 -0.121710441251065 0.0233510105577382 -0.300247612708055 -0.330003807950886 -0.10683234362965 -0.408113820463319 -1.04415249377884 -2.12653409573684 -3.05269567266997 -3.14196425839846 -3.02665900183249 -2.32738841362595 -1.77317927722821 -0.22957664900633 -0.0547590019546946 0.380425353471716 0.332071536202115 0.551523476117998 0.536645378496582 -0.170064258520667
MMP1370 0.564827013882393 1.3234938827001 -0.181055658179259 -0.18676424042428 0.166124474419058 0.31258341767294 0.545591868667275 -3.23287704812872 -0.157009675339149 -0.00203908669271622 0.434325465548555 0.311980263985582 0.181478715651744 0.181478715651744 0.377231038152501 0.487341719559177 0.446559985704852 -0.10807159471396 -0.719797602528826 0.80951741700834 0.316058437371014 0.29158939705842 -0.152931501953717 -0.438403638933987 -1.24180379586418 -1.99626587216918 -1.82090441659558 -2.03296943263807 -2.02889125925264 -2.17978367451364 -2.31844156961834 -2.13492376727388 -2.20425271482623 -0.299745743829284 0.246729489818663 0.92778444518588 1.09498955398861 0.613765094507582 0.711641255757961 -0.263042183360392
MMP1435 0.492506549762909 0.143631766225259 0.649496767399397 0.984250536452288 0.899419490102786 0.636454408913641 0.575367147764889 -1.87804466858648 0.0259213973559426 0.240698689733753 0.551755458005064 0.58878602565641 0.692471615080181 0.366602619748331 0.69987772861045 0.885030566867183 0.677659388019642 0.27032314385483 -0.818375545094759 -0.00370305676513466 -0.307353711506177 -0.0481397379467506 -0.48510043623264 -1.05537117806338 -1.20349344866876 -1.44048908163738 -1.92188646110489 -1.95151091522596 -2.28478602408808 -2.43290829469347 -2.36625327292105 -1.92929257463516 -1.78857641756004 0.0703580785375586 0.0999825326586356 0.00370305676513466 -0.0481397379467506 -0.0999825326586358 0.433257641520755 0.144419213840252
MMP1436 0.555050617849818 0.374275886533224 0.522676722375817 0.790510078981443 0.657137176214994 0.568254864792391 0.409472887685245 -2.52779591013923 -0.0558334941032362 0.239755592325661 0.555050617849818 0.410540397817913 0.305442055976527 0.423677690548086 0.620737081500684 0.804659179723109 0.673286252421377 -0.042696201373063 -0.502501446929125 0.134657250484275 -0.206912360500228 0.0952453722937559 -0.522207386024385 -0.995149924310621 -1.48122975532703 -1.94103500088309 -2.00015281816887 -1.79652478085119 -2.07897657454991 -2.0329960499943 -1.99358417180378 -1.65858320718437 -1.63887726808911 0.0295589086428898 -0.00328432318254331 0.00328432318254331 0.00985296954762992 -0.200343714135141 0.285736116881267 0.147794543214449
MMP1523 -0.694851504332255 0.289464554373759 0.495381934451181 0.857790311517937 0.634364536762783 0.53659639775553 0.442701793385472 -1.85260291028345 -0.437499095320308 0.180146686308362 -0.458087288041264 -0.0874998190640617 0.128676204505973 0.375734517157441 0.602204637087954 0.674263311611299 0.7669101788556 -0.47867548076222 -0.406616806238875 0.0566175299826282 -0.272793553552663 -0.0463234336221503 -0.663969215250821 -0.777204275216077 -0.880145238820856 -1.38455596048427 -2.63014162010209 -3.02131728180025 -2.60955342738113 -2.78455306550926 -2.61984752374161 -1.82720210398482 -1.21985041871662 0.211028975389796 0.643381022529865 0.540440058925087 0.396322709878397 0.33455813171553 0.159558493587407 0.293381746273619
MMP1524 -0.244651315419805 1.09068072067892 1.09084081837233 1.50918998318729 1.44178662048965 1.21011756756739 1.28216392292907 -2.08047958845164 -0.297836383989328 -0.191466246850282 -0.180829233136378 -0.0425480548556183 0.25528832913371 0.404206521128374 0.680768877689893 0.893509151967984 0.936057206823602 0.0319110411417137 0.0212740274278092 0.425480548556183 -0.148918191994664 0.436117562270088 -0.436117562270088 -0.76586498740113 -0.691405891403797 -1.80829233136378 -2.70180148333176 -2.57415731876491 -2.24440989363387 -1.80829233136378 -1.6168260845135 -0.99987928910703 -0.829687069684557 0.159555205708569 0.680768877689893 0.563761726836942 0.361658466272756 0.404206521128374 0.287199370275424 0.425480548556183
Unanno_1 0.416813919763031 0.425409698926301 -0.435475339790345 -0.242291788376859 -0.0350552056055504 0.180074799107549 0.167299319086357 -3.31192093487703 0.0348608005619989 0.616884601249285 0.932147493288232 0.650229714830328 0.259182473743557 0.186429498657646 0.298590335248426 0.216743238276776 0.195523620543385 -0.222805986200602 -0.622947349173111 0.410751171839205 -0.0106098088666953 -0.0863941579145191 -0.36528056241051 -0.886676883859538 -0.656292462754154 -1.64452037433778 -1.9779715101482 -2.19319906144402 -2.25382654068228 -1.9779715101482 -2.12954020824385 -1.99009700599585 -1.98100288411011 -0.137927515267039 0.553225748049113 0.810892534811714 1.00793184233606 0.380437432220075 0.704794446144761 -0.0409235484858248
[+] Show/hide bicluster #135 motif PSSM #1. bicluster 135 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 1 0 0 0
4 0 0 1 0
5 0 0 1 0
6 0 0 0.2 0.8 [+] Show/hide bicluster #135 motif PSSM #2. bicluster 135 motif PSSM #2 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 0 1 0
2 1 0 0 0
3 0 0 1 0
4 0 0 1 0
5 0 0.333333 0.666667 0
6 0 0.666667 0 0.333333
7 0.333333 0 0 0.666667
8 0 0 0 1
9 0 0 0.666667 0.333333
10 0 0.666667 0.333333 0
11 0.333333 0.666667 0 0 |