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[+] Show/hide bicluster #133 rows and columns.
bicluster 133
Methanococcus maripaludis S2
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[+] Show/hide bicluster #133 rows (genes).
bicluster 133 genes
Methanococcus maripaludis S2
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[+] Show/hide bicluster #133 rows (short gene names).
bicluster 133 short names
Methanococcus maripaludis S2
26
short_name
[+] Show/hide bicluster #133 rows (long gene names).
bicluster 133 long names
Methanococcus maripaludis S2
26
long_name
[+] Show/hide bicluster #133 rows (NCBI RefSeq gene IDs).
bicluster 133 NCBI RefSeq IDs
Methanococcus maripaludis S2
50
[+] Show/hide bicluster #133 gene upstream sequences.
bicluster 133 upstream sequences
Methanococcus maripaludis S2
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upstream
[+] Show/hide bicluster #133 columns (arrays; conditions).
bicluster 133 arrays
Methanococcus maripaludis S2
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[+] Show/hide bicluster #133 ratios.
bicluster 133 ratios
Methanococcus maripaludis S2
26x38
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m
MMP0118 -0.5063222584453 0.940256379708581 0.16028169817969 -0.276447213934795 -5.20422881028451 -1.33504232554329 -0.00675096344593734 0.438812623985927 0.560329966012799 0.762858869390919 0.965387772769039 0.519824185337175 0.317295281959055 -0.627839600472172 0.344299135742804 -0.857372357634041 -0.924881992093415 -1.07340318790404 0.155272159256559 -0.0337548172296866 0.0877625247971853 -0.0337548172296866 0.060758671013436 -0.263287574391556 -0.897878138309665 0.344299135742804 0.465816477769676 -0.357801062634679 -0.00675096344593734 0.209279866824057 -0.168774086148433 0.195777939932183 0.00675096344593734 0.128268305472809 0.438812623985927 0.695349234931545 0.276789501283431 0.209279866824057
MMP0170 -0.468486911987028 0.143340495544599 -0.11910493557671 0.314998755685334 -4.9447074359666 -3.07960403034514 -0.644169503982164 -0.424566263988244 -0.292804319991893 -0.497767343986218 -0.263523887992703 -0.292804319991893 -0.351365183990271 -0.527047775985407 0.248883671993109 -0.0146402159995946 -0.717370583980137 -0.527047775985407 -0.614889071982975 -0.366005399989866 -0.322084751991082 -0.761291231978921 0.40992604798865 0.732010799979732 0.336724967990677 0.497767343986218 0.424566263988244 0.292804319991893 1.81538678394973 1.71290527195257 1.53722267995744 1.39082051996149 0.483127127986623 0.248883671993109 0.395285831989055 -0.0146402159995946 -0.161042375995541 0.0146402159995946
MMP0186 -0.953568049935345 0.754321182876777 0.34933099124696 -1.35920600306596 -5.14633177690961 -3.63397472415449 -0.321488656835345 -0.49585538596638 -0.375978259688793 -0.266999053981897 -0.16891776884569 -0.158019848275 -0.0708364837094828 0.397774100830173 -0.375978259688793 0.299692815693966 -0.692017956238793 -0.855486764799138 -0.790099241375 -0.626630432814655 -0.48495746539569 -0.866384685369828 0.343284497976724 0.125326086562931 0.441365783112931 0.430467862542242 0.365080339118104 0.430467862542242 1.02985349393017 0.746507559092242 0.81189508251638 0.735609638521552 0.365080339118104 -0.245203212840517 0.00544896028534483 0.452263703683621 0.626630432814655 0.256101133411207
MMP0844 -0.467506557688936 0.429282465966135 0.248745553029168 -0.202028104392735 -4.91972766319552 -1.33144995895359 0.136946365383628 -0.83584505768628 -0.637508942303095 -0.533618596149998 -0.505284865380971 -0.184169249998672 -0.420283673073892 -0.618619788457077 0.391949942304866 -1.46863171152787 -1.34585221152876 -1.72363528844911 -1.44974255768185 -1.13807151922256 -1.48752086537389 -1.18529440383761 0.722510134610174 0.533618596149998 -0.325837903843804 -0.288059596151769 0.0519451730765485 0.108612634614601 0.259725865382742 0.543063173073007 0.136946365383628 0.184169249998672 0.750843865379201 0.27861501922876 0.505284865380972 0.67528724999513 0.750843865379201 0.609175211534069
MMP0930 0.917837968240499 2.05641962195832 0.712683411616771 0.877942593984585 -3.60273471151159 -3.8958946578447 -0.00430909844244366 -0.469691730226359 -0.495546320881021 -0.357655170722824 -0.193909429909965 -0.40074615514726 -0.409364352032147 -0.495546320881021 -0.504164517765908 -0.935074362010274 -1.47802076575817 -1.53834814395239 -1.23671125298133 -0.779946818082302 -0.952310755780048 -0.943692558895161 0.443837139571697 0.107727461061091 -0.0387818859819929 0.486928123996133 0.607582880384556 -0.00430909844244366 0.323182383183274 0.409364352032147 0.142200248600641 -0.219764020564627 0.469691730226359 0.193909429909965 0.202527626794852 0.702383046118316 0.866128786931175 0.711001243003203
MMP1066 -0.276310897194547 0.13522960487901 0.654408476866011 -0.309834065230038 -5.12893628833325 -4.00144166343893 0.103101081042742 -0.35879176202874 -0.441272626862934 -0.325799416095063 -0.441272626862934 -0.49076114576345 -0.400032194445837 -0.144341513459838 0.103101081042742 0.350543675545321 -0.202078118843773 -0.408280280929256 -0.0206202162085483 -0.581490097081062 -0.160837686426677 -0.466016886313192 1.08462337256964 1.11761571850332 1.24958510223803 0.532001578180546 0.441272626862934 0.383536021478999 0.713459480815771 0.60623435653132 0.680467134882094 0.804188432133384 1.11761571850332 0.0701087351090643 -0.127845340492999 0.507257318730288 0.540249664663966 0.589738183564482
MMP1090 -0.222814655918493 0.585967605831293 0.295409206815642 -0.316961186705489 -5.56613565964606 -1.20975753491249 -0.0331851615197755 0.00474073735996793 0.0237036867998397 0.0521481109596472 -0.0711110603995189 -0.0521481109596472 -0.165925807598878 -0.459851523916889 -0.184888757038749 -0.478814473356761 -0.545184796396312 -0.706369866635221 -0.621036594155799 -0.734814290795029 -0.791703139114644 -1.0192585323931 0.497777422796633 -0.488295948076697 0.365036776717531 1.65451733862881 0.658962493035542 -0.677925442475414 0.194370231758685 0.213333181198557 -0.497777422796633 -0.355555301997595 0.554666271116248 0.772740189674773 0.715851341355157 0.649481018315606 0.981332633513362 0.905480835753875
MMP1199 0.189933417537337 0.203268146630033 -0.0324355731607554 -0.296493755141098 -2.57943601202872 -2.55003139634503 0.244200108262291 -0.135666726812384 -0.259704877040849 -0.0116285765839186 -0.0116285765839186 -0.0348857297517559 0.0348857297517558 0.00387619219463954 0.290714414597965 -0.879895628183175 -1.39155299787559 -1.36054346031848 -1.41481015104343 -1.08921000669371 -1.67063883588964 -1.70940075783604 -0.259704877040849 0.352733489712198 -0.112409573644547 0.0426381141410349 0.298466798987244 0.313971567765803 0.577552637001291 0.624066943336966 0.523285946276338 -0.0348857297517559 -0.298466798987244 0.282962030208686 0.220942955094454 0.228695339483733 0.267457261430128 0.205438186315895
MMP1230 -0.141095498064878 0.168317713246428 0.105746292318106 -0.50764009357736 -5.08322698455042 -2.17614223430598 -0.47834815197605 0.196157155846294 0.326928593077156 0.423286494194634 0.368224836413218 0.402638372526603 0.464582737530696 0.368224836413218 0.347576714745187 -1.2698594825839 -1.38686550536941 -1.48322340648689 -1.29739031147461 -1.03584743701288 -0.994551193676823 -1.13908804535304 0.388872958081249 -0.292515056963771 0.77430456255116 1.44192716315083 1.13220533813036 0.753656440883129 0.698594783101713 0.505878980866758 0.354459421967864 0.395755665303926 0.498996273644081 -0.443934615862665 -0.306280471409125 -0.0447375969474004 0.18239174140094 0.560940638648173
MMP1231 -0.306350396847595 -0.508302849177406 -0.183367338640996 -1.08086789826824 -4.69569001053638 -2.1669084738199 -0.548405031393843 0.245836738211033 0.412249299461579 0.646739726678256 0.472762958098141 0.472762958098141 0.329043018836306 0.427377714120719 0.117245213608339 -0.737510214633099 -1.60739405753368 -1.69816454548852 -1.51662356957884 -1.34264680099872 -1.14597741042989 -1.06277112980462 0.381992470143298 -0.919051190542785 0.381992470143298 1.53175198423798 1.30482576435087 0.722381799973959 0.533276616734703 0.117245213608339 0.0113463109943554 0.351735640825017 0.434941921450289 -0.276093567529314 -0.117245213608339 0.177758872244901 0.46519875076857 0.835844909917513
MMP1454 -0.609321974732969 0.122844825412288 0.36186356900413 0.154802242822931 -5.14029487962832 -1.62384512305107 0.596758635047753 -1.63951582892067 -1.16210892088247 -1.16210892088247 -0.621885314418185 -0.420871879454731 -0.169605085750414 -0.345491841343436 -0.609321974732969 -0.948532146233798 0.345491841343436 -0.433435219139947 -0.33292850165822 -0.810335409696423 -0.659575333473833 -1.02391218434509 0.0439716888982555 1.08672888277117 0.383181860399084 0.69726535252948 1.03647552403031 0.797772070011207 1.08672888277117 1.36312235584592 1.14954558119725 1.06160220340074 0.207295104806062 -0.144478406379982 0.358055181028652 0.747518711270344 0.659575333473833 0.18216842543563
MMP1455 -0.423658455089204 0.0638755751779771 -0.0768960259984261 -0.325990723176017 -6.30684646349951 -1.4216522405559 0.327128680511917 -1.17444559069032 -0.970660511027163 -0.777600961872589 -0.659620126278127 -0.380756333054854 -0.123343600848755 0.0589904177972308 -0.380756333054854 -0.895581797467051 0.498737168649316 -0.176971253391693 -0.23059890593463 -0.241324436443217 -0.176971253391693 -0.745424370346827 0.0160882957628812 -0.337854211020504 0.198422314408867 0.820503083906939 0.713247778821064 0.777600961872589 0.370030802546266 0.0697159483058182 0.305677619494742 0.134069131357343 0.0160882957628812 0.241324436443217 0.745424370346827 1.06719028560445 0.863405205941288 0.423658455089204
MMP1456 -0.377831258473614 0.00126250949241766 0.323507631184779 -0.132524121734035 -6.86330247921264 -1.24485429413193 0.0693441309415567 -1.01329102237938 -0.715174096102602 -0.45628308117803 -0.495508992530238 -0.252308342146549 -0.0954046967377167 0.0301182195893487 -0.252308342146549 -0.895613288322759 0.398841786300104 -0.189546883983016 -0.362140893932731 -0.134630608089925 -0.0640239676559503 -0.550425268423329 0.0536537664006735 -0.0797143321968335 -0.1110950612786 0.414532150840987 0.453758062193195 0.328235145866129 0.273318869973038 -0.0561787853855087 0.116415224564206 0.124260406834648 0.0850344954824399 0.0379634018597903 0.304699599054804 0.704803894847326 0.7754105352813 0.390996604029662
MMP1457 -0.388238897479317 0.348483420732106 0.126271636906117 -0.185230009998817 -6.22203532034097 -2.02307414334623 -0.295061562084281 -1.08189239430903 -1.11295150610737 -0.771301276325576 -0.584946605535504 -0.419298009277662 -0.0983538540280936 -0.0983538540280936 0.0155295558991727 -1.39248351229248 0.119059928560324 -0.533181419204928 -0.408944972011547 -0.63671179186608 -0.440004083809892 -1.20612884150241 0.129412965826439 0.108706891294209 -0.709183052728885 0.21223726395536 0.357179785680971 0.69883001546277 0.150119040358669 -0.0569417049636331 0.284708524818166 0.0983538540280936 0.19153118942313 -0.0155295558991727 0.471063195608238 0.988715058913993 0.864478611720612 0.408944972011547
MMP1458 -0.422979141848802 0.167863211424905 0.118443082449432 -0.808821343489116 -5.59493231796718 -4.14519005572279 -0.448366276999827 -0.837635682648881 -0.71916238527743 -0.541452439220253 -0.389129628314101 -0.211419682256925 -0.0506344929670982 0.0255269124859776 0.203236858543154 -1.15074368284486 0.101688317939053 -0.431441520232477 -0.532990060836578 -0.490678168918202 -0.0844840065017985 -0.549914817603928 0.169387345008454 0.000139777334952356 -0.643000979824354 -0.0929463848854736 0.29632302076358 0.736366696714685 0.482495345204432 0.0932259395553782 0.160924966624779 0.0847635611717031 0.220161615310504 -0.0421721145834231 0.457108210053407 0.81252810216776 0.736366696714685 0.31324777753093
MMP1459 -0.662168571148116 0.184119773336949 -0.268558131791923 -0.648254593844793 -5.20316530015127 -3.38730959105041 -0.448565806261627 -0.662168571148116 -0.918491889011903 -0.59808774168217 -0.38448497679568 -0.0213602764886489 -0.128161658931893 0.181562350153516 0.202922626642165 -1.08937410092109 -0.234963041375138 -0.736929538858387 -0.779650091835685 -0.448565806261627 -0.0854411059545957 -0.683528847636765 0.245643179619462 0.28836373259676 -0.138841797176218 0.38448497679568 0.779650091835685 1.36705769527353 1.13209465389839 0.416525391528654 0.38448497679568 0.341764423818383 0.405845253284329 0.0213602764886489 0.576727465193521 1.14277479214272 0.961212441989201 0.28836373259676
MMP1460 -0.658782620869847 -0.222178298422902 0.241354076407483 -0.940513244553126 -3.40861277493088 -2.60654553291513 -0.725326319947609 -1.25767591256971 -1.17782347367639 -0.778561279209819 -0.539003962529875 -0.0731980689855383 -0.24621168658772 0.299446645849931 -0.232902946772168 -2.09612652094951 0.286137906034378 -0.725326319947609 -0.685400100500952 -1.00480985607421 -0.286137906034378 -0.725326319947609 0.419225304189903 0.419225304189903 -0.35268160511214 1.17782347367639 1.17782347367639 1.67024684685183 1.41738079035634 0.552312702345428 0.419225304189903 0.299446645849931 0.499077743083218 0.0598893291699861 0.871722457918687 1.53715944869631 1.51054196906521 0.778561279209819
MMP1461 -0.583203830543863 0.132228302786724 0.0578064814967524 -0.836475390330615 -2.70962787075209 -1.8966813227389 -1.20464104534839 -1.47483113874166 -1.17762203600906 -0.772336895919154 -0.596713335213527 -0.502146802525882 -0.177918690453956 0.0652523935999888 0.119290412278643 -2.13679686755518 0.092271402939316 -1.06954599865175 -0.826374914597808 -1.17762203600906 -0.488637297856219 -0.988488970633771 0.281404468314606 0.416499515011242 -0.583203830543863 1.92956403801356 1.83499750532592 2.11869710338885 1.05144623448543 0.254385458975279 0.416499515011242 0.29491397298427 0.348951991662924 -0.00229512974832923 0.781256141092159 1.7674499819776 1.63235493528096 0.781256141092159
MMP1462 -0.506822158784633 0.121767651372329 0.254453588564384 -0.0860446896946642 -3.48187021793022 -1.85955106479561 -0.978635656695148 -1.28903927374154 -1.40078457587824 -0.74272890773989 -0.668232039648756 -0.270915409829375 -0.196418541738241 0.11398507530815 0.014655917853305 -1.61185903546979 -0.121921673647107 -1.06554866946814 -1.09038095883185 -1.42561686524195 -0.82964192051288 -1.06554866946814 0.337475679581552 0.300227245535985 -0.25849926514752 1.98882292226835 1.91432605417722 1.81499689672238 1.23143809667516 0.225730377444851 0.325059534899696 0.0643204965807273 0.498885560445676 -0.022592516192262 0.722376164719077 1.60392243713083 1.65358701585825 0.945866768992479
MMP1463 -0.488764069581476 0.22523939349219 0.170633462325386 -0.419110584198491 -3.9982259555102 -3.29881499218752 -0.176358169436615 -0.851558018136798 -0.901946066547259 -0.529074508309845 -0.377910363078461 -0.216668608164984 -0.176358169436615 0.00503880484104614 0.045349243569415 -1.44613698938024 -0.115892511344061 -0.912023676229352 -0.912023676229352 -1.01279977305027 -0.539152117991937 -1.08334304082492 0.569384947038214 0.398065582442645 0.216668608164984 1.64768918302209 1.95001747348486 1.48644742810861 1.17404152796375 0.166280559754522 0.478686459899383 0.0352716338873227 0.710471482587506 0.0856596822977842 0.650005824494952 1.34536089255932 1.39574894096978 0.932178895593536
MMP1464 -0.242207954459971 -0.13916096597357 -0.178047291590149 -0.139431009901463 -3.18930708667063 -4.26448697212025 -0.627946548599924 -0.708682533419915 -0.789418518239905 -0.394709259119953 -0.296031944339964 0.00897066497999893 -0.00897066497999893 -0.0448533248999946 0.224266624499973 -1.06750913261987 -0.260149284419969 -0.852213173099897 -0.968831817839883 -0.8253011781599 -0.762506523299908 -0.932949157919888 0.708682533419914 0.708682533419914 0.654858543539921 1.6236903613798 1.88383964579977 1.48913038667982 1.40839440185983 0.968831817839883 0.870154503059895 0.49338657389994 0.798389183219904 0.197354629559976 0.645887878559922 1.16618644739986 1.18412777735986 0.807359848199903
MMP1465 -0.253964754121727 0.03092352656664 -0.0879821877345684 -0.175656851169423 -2.75514642624135 -3.94892079705258 -0.502526002836609 -0.7402802407378 -0.94561344619792 -0.567368067718752 -0.610596110973514 -0.480911981209228 -0.383648883886013 0.0702455702889884 -0.167508667612203 -1.43192893281399 -0.135087635171131 -0.718666219110419 -0.967227467825301 -1.16175366247173 -1.12933263003066 -1.20498170572649 0.459297959581847 0.178315678425893 0.0594385594752979 1.52919203013721 1.98308648431221 1.4211219220003 0.783508283992562 -0.351227851444942 -0.135087635171131 -0.351227851444942 0.502526002836609 0.686245186669347 1.05368355433482 1.58322708420566 1.59403409501935 1.34547284630447
MMP1466 -0.379374003538502 0.510267293405853 0.564188431254761 0.659020253182721 -2.67570602232296 -5.3035304640981 -0.552253296290225 -0.619484132360339 -0.821176640570682 -0.782759019959188 -0.686714968430453 -0.629088537513212 -0.264121141704021 0.0432198231879306 -0.67711056327758 -0.2353079262454 0.129659469563792 -0.273725546856894 -0.590670916901718 -0.965242717863784 -0.917220692099417 -1.24377046729711 0.273725546856894 -0.0240110128821837 -0.168077090175286 0.244912331398273 0.95563831271091 0.561857701443098 0.340956382927008 -0.667506158124706 -0.0240110128821837 0.187285900481033 0.350560788079882 0.629088537513212 0.600275322054592 1.0324735539339 1.27258368275574 1.45506738066033
MMP1467 -0.438537006538118 0.450621300315611 0.144233602135403 0.0403526581593081 -4.00183845443556 -5.46423780981504 -0.44665665473388 -0.324861931797441 -0.568451377670319 -0.462895951125405 -0.487254895712693 -0.341101228188966 -0.357340524580491 -0.186827912469476 -0.527853136691506 -1.04751062122031 -0.178708264273714 -0.22742615344829 -0.511613840299981 -0.397938765559305 -0.406058413755067 -0.901356953696587 0.397786757625432 0.357188516646618 0.0242829406203514 0.292231331080518 0.82812811200085 0.560179721540684 0.64137620349831 0.365308164842381 0.129838367165265 0.00804364422882619 0.470863591387295 0.438384998604245 0.527701128757633 0.7956495192178 0.844367408392375 1.04735861328644
MMP1630 -0.498178526773229 0.449692527888377 0.492608530459438 0.0334552213636288 -4.42693671823409 -5.32179109469888 0.105995431228347 -0.445180811159056 -0.551176242387402 -0.551176242387402 -0.434581268036221 -0.47697944052756 -0.349784923053544 0.127194517474016 -0.0317986293685039 0.127194517474016 -0.794965734212599 -0.763167104844095 -0.29678720743937 -0.328585836807874 -0.445180811159056 -0.625373044247245 -0.180192233088189 -0.180192233088189 0.190791776211024 0.508778069896064 0.392183095544882 0.466379897404725 0.222590405579528 0.0741968018598427 0.201391319333859 -0.15899314684252 -0.180192233088189 0.031798629368504 0.095395888105512 0.360384466176379 0.47697944052756 0.339185379930709
Unanno_59 -0.463210273373249 1.58808555322838 0.444149834849992 -0.57034329336231 -5.44522483561335 -4.05674260217524 0.139837063659849 -0.340852842670881 -0.436990823937027 -0.16605651309607 -0.183536146053551 -0.235975044925995 -0.3233732097134 -0.122357430702368 0.253454677883476 -0.0699185318299243 -0.402031558022065 -0.611787153511838 -0.305893576755919 -0.270934310840957 -0.122357430702368 -0.445730640415768 0.0873981647874055 0.419511190979546 0.096137981266146 0.332113026192141 0.393291741543325 0.524388988724433 0.244714861404735 0.428251007458287 0.436990823937027 0.218495411968514 -0.00873981647874049 0.174796329574811 0.410771374500806 0.594307520554357 0.270934310840957 0.0786583483086649
[+] Show/hide bicluster #133 motif PSSM #1. bicluster 133 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 1 0 0 0
3 0 0.2 0.8 0
4 0 0 1 0
5 0 0 0.6 0.4
6 0 0 1 0 [+] Show/hide bicluster #133 motif PSSM #2. bicluster 133 motif PSSM #2 Methanococcus maripaludis S2 9x4
POSITION A C G T
1 0 0.2 0.8 0
2 0 0 0 1
3 0 1 0 0
4 0.4 0.2 0 0.4
5 0 1 0 0
6 0 0.6 0 0.4
7 1 0 0 0
8 1 0 0 0
9 0 0.6 0.4 0 |