|
[+] Show/hide bicluster #128 rows and columns.
bicluster 128
Methanococcus maripaludis S2
8x38
[+] Show/hide bicluster #128 rows (genes).
bicluster 128 genes
Methanococcus maripaludis S2
8
[+] Show/hide bicluster #128 rows (short gene names).
bicluster 128 short names
Methanococcus maripaludis S2
8
short_name
[+] Show/hide bicluster #128 rows (long gene names).
bicluster 128 long names
Methanococcus maripaludis S2
8
long_name
[+] Show/hide bicluster #128 rows (NCBI RefSeq gene IDs).
bicluster 128 NCBI RefSeq IDs
Methanococcus maripaludis S2
16
[+] Show/hide bicluster #128 gene upstream sequences.
bicluster 128 upstream sequences
Methanococcus maripaludis S2
8
upstream
[+] Show/hide bicluster #128 columns (arrays; conditions).
bicluster 128 arrays
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #128 ratios.
bicluster 128 ratios
Methanococcus maripaludis S2
8x38
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0849m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_minus30m
MMP0062 0.0380347739270684 0.449705268196514 0.97178537735853 0.180280725133399 0.444295210902486 0.630519715176375 0.624525506400337 -0.481028023195276 0.324414248201465 0.588420326048175 0.257294058918403 -0.458654626767589 -0.0469841324981432 -0.328888927487003 -0.275192776060553 0.463129306053126 1.10748312317052 1.25514753959325 1.02693889603084 0.400483796055602 -0.0380347739270683 -0.445230588910976 -0.284142134631628 -0.234920662490716 -0.655540515331236 -0.856901083180422 -1.21935010530896 -1.46098278672798 -1.71603950600361 -2.31117185098009 -2.38724139883423 -2.33354524740778 -2.4677856259739 -0.167800473207654 0.293091493202703 1.40281195601599 0.208072586777492 -0.521300136765113
MMP0298 -0.0910560771863642 0.441955106343573 0.732372996723091 -0.168767539803798 0.334718577445665 0.510547613753982 0.425441011839939 -0.832829974265527 0.370886948539581 0.872805813030272 0.690693658657544 -0.197658313892352 0.362003428814082 -0.681810138932045 -0.117706636362861 0.823946454540028 1.63678850942318 1.62790498969768 1.02382564836375 0.513023264147564 0.188774794166853 -0.233192392794347 -0.117706636362861 -0.233192392794347 -0.544115583186811 -1.0815685265795 -0.792854135500781 -0.797295895363531 -1.037150927952 -2.28972720924735 -2.3385865677376 -1.99657105830589 -1.97436225899214 -0.357561668951333 0.459722145794571 1.42358403601121 0.00222087993137474 -0.273168231559093
MMP1207 0.0557675885400524 0.23025253017148 0.931268449440752 -0.537416982415402 0.00798652474835369 0.440157821000657 0.446016401221426 -0.494531073528295 0.0893223850076346 0.518823779792686 0.273873765579337 -0.35360092836445 0.206764172644172 -0.252936538961703 -0.460976277060713 0.23025253017148 1.1362320347962 1.16307587197026 0.837594346234717 0.468491585091313 0.109455262888184 -0.0784515973302762 -0.118717353091375 -0.266358457548736 -0.722703689507854 -1.45084277285439 -1.45084277285439 -1.6823708684807 -1.79981265611724 -2.48768598370268 -2.39373255359345 -2.18904829514119 -2.02462979245004 -0.326757091190384 0.616132689548675 1.25031834278598 0.163142937236315 0.13629910006225
MMP1543 0.0145818506227783 0.332731318756123 0.625302611591054 -0.0183686220159898 0.312764910342484 0.369629853963464 0.369071180846176 -0.6349733134828 0.51036477179724 0.481201070551683 0.380453738976124 -0.115329182198337 0.197517794799451 -0.399012457950569 -0.345987546595012 0.653532032457245 1.09363879670837 0.916005343667254 0.701254452677246 0.34863879216279 0.0729092531138914 -0.197517794799451 -0.128585410037227 -0.218727759341674 -0.595204629966132 -0.966379009455034 -1.21294484725838 -1.26331851304616 -1.43564947495172 -2.34502670469953 -2.40335410719064 -2.15413702381952 -1.93408364169396 -0.457339860441683 0.356592528866123 0.886841642421697 -0.0570017797072242 -0.242588969451675
MMP1544 -0.0331224202049806 0.215295731332374 0.717360455359867 -0.0935182717982049 0.256250557799394 0.426751955877813 0.430158660280534 -0.557560740117173 0.590683160322154 0.518917916544696 0.419550655929754 -0.0745254454612063 0.245657949853606 -0.471994487920973 -0.416790454246006 0.574121950219664 1.10960107686685 0.971590992679431 0.706611631039586 0.397469042459767 0.10212746229869 -0.207015126281129 -0.237377344802361 -0.193214117862387 -0.637606588945876 -0.81977990007327 -1.35525902672046 -1.21448874084929 -1.37182023682295 -2.24956437225493 -2.40965606991234 -2.16123791837498 -1.98734521229884 -0.458193479502232 0.339504807101051 0.957789984260689 -0.00276020168374839 -0.198734521229884
MMP1545 -0.0291269332475135 0.25382041829976 0.675554832777794 -0.0828423852515824 0.298109839906205 0.45468270982583 0.376646790070892 -0.42026003685698 0.470191922424146 0.522897801633933 0.434130005070082 -0.106798755240883 0.187244570876872 -0.447999973283184 -0.484061890637248 0.511801827063451 1.19697825679067 0.963962790810566 0.694885407476393 0.264916392870242 0.0901547933851608 -0.234402462801418 -0.237176456444038 -0.33704022757837 -0.730947324830458 -0.764235248541902 -1.47437762105271 -1.16646432672185 -1.23304017414474 -2.35373360576335 -2.39811750404528 -2.21780791727496 -2.05414229236036 -0.517349814348692 0.273238373798103 1.11098445386944 0.0041609904639305 -0.287108342011204
MMP1546 -0.0632784559618492 0.208355891581699 0.696377793487835 -0.13409964831278 0.204270544948937 0.347554036342268 0.394478916181725 -0.834966943301473 0.662108722137398 0.57567961155536 0.470729977277171 -0.0571049480631321 0.245396938974001 -0.563332595757926 -0.405908144340642 0.387387620644491 1.20537741722449 1.05103971975657 0.822619927504039 0.365780342998982 0.0540181941137737 -0.26700421661951 -0.248483692923359 -0.313305525859887 -0.696063015580341 -0.680629245833548 -1.47701176476804 -1.29489328175589 -1.27019925016102 -2.08818904674102 -2.25487376000638 -2.02645396775385 -1.90915731767823 -0.529378302314982 0.180575106037472 1.17142312378155 0.00154337697467925 -0.341086311404114
MMP1547 -0.0795915744343596 0.238774723303079 0.695741025882779 -0.2106043307346 0.194581633750449 0.38752302631422 0.400678122968259 -0.638234323294393 0.569154843596647 0.611203222543101 0.482054630064706 -0.0946088526295218 0.202733255634689 -0.590179033069874 -0.455023529313414 0.262802368415338 1.13981141501281 1.08574921351023 0.836462395470534 0.500075363898901 0.0375431954879054 -0.271812735332436 -0.247785090220176 -0.199729799995657 -0.743355270660528 -0.578165210513744 -1.20588743907152 -1.23291853982282 -1.19387361651539 -2.38023859393321 -2.41928351724063 -2.23607272325965 -2.0648757518348 -0.52410300901116 0.127646864658879 1.22090471726669 0.0465535624050027 -0.310857658639857
[+] Show/hide bicluster #128 motif PSSM #1. bicluster 128 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0.25 0.75 0
2 1 0 0 0
3 0 0.75 0.25 0
4 0 0.25 0.75 0
5 0 0 1 0
6 0 0 1 0 [+] Show/hide bicluster #128 motif PSSM #2. bicluster 128 motif PSSM #2 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 0.5 0.5 0
2 0 0 1 0
3 0 0.5 0 0.5
4 0.5 0 0 0.5
5 0 0.5 0.5 0
6 0 0 1 0
7 0 0.5 0.5 0
8 0 0.5 0.5 0 |