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[+] Show/hide bicluster #127 rows and columns.
bicluster 127
Methanococcus maripaludis S2
12x40
[+] Show/hide bicluster #127 rows (genes).
bicluster 127 genes
Methanococcus maripaludis S2
12
[+] Show/hide bicluster #127 rows (short gene names).
bicluster 127 short names
Methanococcus maripaludis S2
12
short_name
[+] Show/hide bicluster #127 rows (long gene names).
bicluster 127 long names
Methanococcus maripaludis S2
12
long_name
[+] Show/hide bicluster #127 rows (NCBI RefSeq gene IDs).
bicluster 127 NCBI RefSeq IDs
Methanococcus maripaludis S2
24
[+] Show/hide bicluster #127 gene upstream sequences.
bicluster 127 upstream sequences
Methanococcus maripaludis S2
12
upstream
[+] Show/hide bicluster #127 columns (arrays; conditions).
bicluster 127 arrays
Methanococcus maripaludis S2
40
[+] Show/hide bicluster #127 ratios.
bicluster 127 ratios
Methanococcus maripaludis S2
12x40
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0300m
MMP0197 -0.424269162141953 -0.543035232702735 1.84978007760453 1.71352010795213 0.314719721347359 -0.437465392204262 -0.358288011830407 -0.292306861518861 0.248738571035813 -0.186737021020388 -0.397876702017334 -0.648605073201208 -0.252718171331934 0.736999083341251 0.789784003590488 -0.872940984260463 -0.965314594696627 -1.0708844351951 0.539055632406614 0.14316873053734 0.486270712157378 0.459878252032759 2.21497685031987 0.697410393154324 2.41292030125451 -0.0547747203972969 0.129972500475031 0.697410393154324 0.868961383964343 2.08301454969678 2.47890145156606 1.54196911714211 0.486270712157378 0.129972500475031 -0.371484241892716 -1.08408066525741 -1.05768820513279 -0.556231462765044 -0.00198980014806032 -1.11047312538203
MMP0484 -0.518036936355339 -0.719869508961315 1.73849178027106 1.55411080906602 0.289293354068566 -0.42384840247255 -0.100916286302988 0.0201832572605976 0.396937392791753 0.0201832572605976 -0.141282800824183 -0.302748858908964 -0.329659868589761 0.639136479918925 0.706414004120917 -0.908246576726893 -0.544947946036135 -0.477670421834143 -0.100916286302988 0.316204363749363 0.881335567046096 1.00243511060968 2.21343054624554 0.410392897632151 2.18651953656474 -0.235471334706972 0.154738305664582 0.652591984759323 0.975524100928885 2.06541999300116 2.37489660433032 1.80976540103359 0.289293354068566 0.0740052766221913 -0.666047489599721 -1.36573374130044 -1.35227823646004 -0.867880062205697 -0.275837849228167 -1.27154520741765
MMP0495 0.0146555629665203 -0.571566955694291 1.84518945651225 1.36296735588639 0.630189207560372 -0.54225582976125 -0.351733511196487 -0.366389074163007 0.0439666888995609 -0.175866755598243 -0.571566955694291 -0.718122585359494 -0.54225582976125 0.864678215024696 0.146555629665203 -0.54225582976125 -0.439666888995608 -0.395700200096047 0.249144570430845 0.175866755598243 0.366389074163007 0.51294470382821 1.37762291885291 0.820711526125136 2.28626782277716 0.366389074163007 0.586222518660811 0.806055963158615 0.981922718756859 2.21299000794456 2.44747901540889 2.22764557091108 0.820711526125136 -0.102588940765642 -0.454322451962129 -0.981922718756859 -0.923300466890777 -0.425011326029088 -0.0146555629665203 -0.937956029857298
MMP0741 -0.117054489597368 -0.338841943571327 2.08315396478474 2.12546310058378 0.425092620116756 -0.462057195779083 -0.080089913935041 -0.314198893129776 0.289555842688225 -0.240269741805123 -0.437414145337532 -0.535986347103736 -0.375806519233654 0.659201599311492 0.16634059048047 -0.0308038130519389 -0.190983640922021 -0.52366482188296 0.757773801077696 0.314198893129776 0.634558548869941 0.437414145337532 1.75581734396051 0.659201599311492 2.31028597889541 0.0677683887142655 0.437414145337532 0.794738376740023 1.04116888115553 1.82974649528517 2.38421513022007 1.9159971718306 0.535986347103736 0.0554468634934899 -0.338841943571327 -0.548307872324512 -0.646880074090716 -0.203305166142796 -0.0184822878311633 -0.954918204610105
MMP0751 -0.384690751725181 -0.795911900121065 1.91963684372209 1.7908017752724 0.384690751725181 -0.0132651983353511 -0.49081233840799 -0.278569165042373 0.198977975030266 -0.517342735078692 -0.689790313438256 -0.915298685139225 -0.451016743401937 0.769381503450363 1.35305023020581 -0.716320710108958 -0.795911900121065 -0.0928563883474576 0.0132651983353511 -0.159182380024213 0.504077536743341 0.437751545066586 1.8438625686138 0.636729520096852 2.34794010535714 -0.198977975030266 0.291834363377724 0.649994718432203 0.729585908444309 1.7908017752724 2.32140970868644 2.45406169203995 0.451016743401937 -0.0132651983353511 -0.583668726755448 -1.18060265184625 -1.1938678501816 -0.596933925090799 0.0265303966707021 -1.08774626349879
MMP0766 -0.35919477567972 -0.614892751587317 1.92071012095464 1.8933826311253 0.0547924234087708 -0.29831430522553 -0.273962117043854 -0.261786022953016 0.17655336431715 -0.35919477567972 -0.578364469314803 -0.639244939768993 -0.639244939768993 0.663597127950668 -0.0304402352270949 -0.700125410223182 -0.541836187042289 -1.04105604476664 0.639244939768992 0.200905552498826 0.493131810678937 0.566188375223965 1.10193651522083 0.566188375223965 2.2464893597596 -0.200905552498826 0.0182641411362569 0.578364469314803 0.931471197949103 2.12472841885122 2.13690451294206 1.57680418476351 0.371370869770558 0.0913207056812846 -0.432251340224747 -0.967999480221617 -1.15064089158419 -0.566188375223965 -0.0182641411362569 -0.821886351131562
MMP0774 -0.599905711118089 -1.0556489970066 1.13674481814603 1.57753443257147 0.336899932097187 -0.713841532590217 -0.587246175398963 -0.410012675331208 -0.00490753231919754 -0.65054385399459 -0.675862925432841 -0.789798746904969 -0.523948496803336 0.666047860794445 0.349559467816312 -0.701181996871091 -0.637884318275465 -0.574586639679838 0.362219003535437 0.222964110625059 0.526792967884067 0.514133432164941 1.93200143270698 0.362219003535437 2.12189446849386 -0.321395925297331 0.0963687534338052 0.488814360726691 0.704026467951821 1.80540607551573 2.10923493277473 1.47625814681847 0.27360225350156 0.0837092177146798 -0.422672211050334 -1.09362760416398 -1.08096806844485 -0.549267568241587 -0.0428861394765736 -1.1062871398831
MMP0781 -0.66031787621113 -0.941340271054411 1.60135166892543 1.6503107036114 0.370097571547564 -0.504194323520419 -0.129497797062712 -0.301233705022494 0.229586374125924 -0.285621349753423 -0.566643744596704 -0.707154942018344 -0.394907836636921 0.994591782310409 -0.0202113101792142 -0.441744902444135 -0.37929548136785 -0.504194323520419 0.448159347892919 0.354485216278493 0.479384058431062 0.463771703161991 1.82204661157118 0.619895255852702 2.89929912513709 -0.285621349753423 -0.0202113101792142 0.557445834776417 0.838468229619698 1.77520954576397 2.49337788814124 1.75959719049489 0.541833479507346 0.744794098005271 -0.00459895491014319 -0.847666139439984 -0.644705520942059 -0.0358236654482854 0.385709926816635 -0.925727915785339
MMP0782 -0.692033297648017 -0.819011884372424 1.19014771657515 1.78404914347792 0.146025374733068 -0.615846145613373 -0.311097537474797 -0.450773982871644 0.00634892933622035 -0.438076124199203 -0.704731156320458 -0.907896895079509 -0.615846145613373 0.590450428268492 -0.425378265526763 -0.653939721630695 -0.717429014992898 -0.831709743044865 0.311097537474797 0.222212526767712 0.476169700216526 0.577752569596051 2.25386991435822 0.247608244112593 2.16498490365114 -0.196816809422831 -0.00634892933622035 0.438076124199203 0.666637580303136 1.8094448608228 2.15228704497869 1.25073907923541 0.146025374733068 0.323795396147237 -0.311097537474797 -1.32692623127005 -1.02217762313147 -0.514263276233847 0.120629657388186 -1.07296905782124
MMP0973 -0.30751005898334 -0.61502011796668 1.69576880495905 2.09665949306823 0.852641527181079 -0.503198278336374 -0.181710489399246 -0.265576869121975 0.209665949306823 -0.349443248844704 -0.517176008290163 -0.587064658059103 -0.377398708752281 0.642975577874256 0 -0.139777299537882 -0.531153738243951 -0.195688219353034 0.754797417504561 0.433309628567433 0.76877514745835 0.670931037781832 2.69770188108112 0.754797417504561 2.52996912163566 -0.181710489399246 0.181710489399246 0.656953307828044 0.922530176950019 1.97085992348413 2.29234771242126 1.55152802487049 0.601042388012891 0.195688219353034 -0.363420978798493 -0.978441096765172 -0.908552446996231 -0.349443248844704 0.15375502949167 -1.03435201658032
MMP1571 -0.368888130813579 -0.564624690020785 2.10541879820411 1.96489392127233 0.579681348421339 -0.414058106015242 -0.368888130813579 -0.188208230006928 0.15809491320582 -0.308661497211362 -0.564624690020785 -0.670021298824664 -0.399001447614688 0.639907982023556 0.15809491320582 -0.805531224429653 -0.670021298824664 -0.594738006821893 -0.112924938004157 0.188208230006928 0.338774814012471 0.534511373219676 1.54330748605681 0.685077957225219 2.62738689089672 -0.00752832920027713 0.233378205208591 0.850701199631315 1.1518343676424 2.23591377248231 2.43165033168951 1.93478060447122 0.489341398018013 0.188208230006928 -0.489341398018013 -0.986211125236304 -1.06149441723908 -0.534511373219676 0.0677549628024941 -1.10666439244074
MMP1572 -0.4347380527875 -0.662139495784038 1.63978777910484 1.95966537641135 0.00668827773519231 -0.207336609790961 -0.274219387142884 -0.167206943379808 0.193960054320577 -0.287595942613269 -0.6086332739025 -0.541750496550577 -0.514997385609807 0.862787827839807 0.367855275435577 -0.769151939547115 -0.207336609790961 -0.2608428316725 -0.514997385609807 0.541750496550577 0.688892606724807 0.916294049721346 1.91953571000019 0.635386384843269 2.37433859599327 -0.0601944996167307 0.180583498850192 0.555127052020961 0.969800271602884 1.78577015529635 2.26732615223019 1.94628882094096 0.541750496550577 0.127077276968654 -0.421361497317115 -1.25070793648096 -1.10356582630673 -0.581880162961731 -0.00668827773519231 -1.11694238177711
[+] Show/hide bicluster #127 motif PSSM #1. bicluster 127 motif PSSM #1 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0 0.571429 0.285714 0.142857
2 0 1 0 0
3 0 0.857143 0.142857 0
4 0 0 1 0
5 0 0 0 1
6 0.428571 0 0.571429 0
7 1 0 0 0 [+] Show/hide bicluster #127 motif PSSM #2. bicluster 127 motif PSSM #2 Methanococcus maripaludis S2 9x4
POSITION A C G T
1 0 0 1 0
2 0 0 0 1
3 0 0 0.4 0.6
4 0 0 1 0
5 0.6 0.4 0 0
6 0 0.6 0 0.4
7 0 0 1 0
8 0.2 0 0.8 0
9 0 0 0 1 |