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[+] Show/hide bicluster #103 rows and columns.
bicluster 103
Methanococcus maripaludis S2
12x37
[+] Show/hide bicluster #103 rows (genes).
bicluster 103 genes
Methanococcus maripaludis S2
12
[+] Show/hide bicluster #103 rows (short gene names).
bicluster 103 short names
Methanococcus maripaludis S2
12
short_name
[+] Show/hide bicluster #103 rows (long gene names).
bicluster 103 long names
Methanococcus maripaludis S2
12
long_name
[+] Show/hide bicluster #103 rows (NCBI RefSeq gene IDs).
bicluster 103 NCBI RefSeq IDs
Methanococcus maripaludis S2
24
[+] Show/hide bicluster #103 gene upstream sequences.
bicluster 103 upstream sequences
Methanococcus maripaludis S2
12
upstream
[+] Show/hide bicluster #103 columns (arrays; conditions).
bicluster 103 arrays
Methanococcus maripaludis S2
37
[+] Show/hide bicluster #103 ratios.
bicluster 103 ratios
Methanococcus maripaludis S2
12x37
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0849m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
MMP0258 -0.237645138599893 0.0787751039326203 0.710542981331105 -0.871020968744855 -0.0584262890022853 -0.0408046748287187 -1.03502414978183 -0.667976668444111 1.24320159645227 0.116745533036522 -0.294600782255745 0.110417128185872 0.142059152439123 0.654659945341794 -0.769231146054515 -0.383198450164849 -1.40840003597019 -0.262958758002494 1.30015724010812 1.59759226808868 0.55340546773139 0.698958779296346 -0.294600782255745 -0.978068506125974 -0.111077041586888 -0.592035810236308 0.439494180419685 -0.0857634221842866 0.192686391244325 0.452150990120986 2.45825532777712 1.29382883525747 1.19257435764707 0.07244669908197 0.281284059153429 0.711615588997647 0.0408046748287187
MMP1319 0.251836898149324 0.639278279917516 1.03517587495289 0.0919188018265618 0.648688315750401 0.623466758383418 -0.750667677175871 -0.886272160794738 0.895958195338942 0.0339011209047167 -0.484301727210239 -0.0435871554489215 0.0581162072652287 0.217935777244608 -0.808783884441099 -0.542417934475468 -1.24949845620242 0.455243623577625 1.59819569979379 1.44806216435861 0.721609573543256 0.24215086360512 -0.237307846333017 -0.944388368059966 -0.77003974626428 -0.794254832624792 -0.22277879451671 -0.474615692666034 0.164662587251481 0.760353711720075 2.21325889335079 1.08967888622304 0.755510694447973 -0.0581162072652287 0.111389397258355 0.586005089924389 -0.358383278135577
MMP1320 0.0817885992761697 0.612175273370118 1.16472634558417 -0.100709281376515 0.569200896333933 0.670370092353275 -1.04342425137174 -0.983941633716344 0.835235089577854 0.0917023688854024 -0.48825315325471 -0.156141871345415 0.0619610600577043 0.260236452242358 -0.820364435164005 -0.537822001300873 -1.47467322937336 0.304848415483905 1.44988880535028 1.53415584702876 0.587390849347037 0.215624489000811 -0.250322682633125 -1.00872605773943 -0.988898518520961 -0.641916582197816 -0.245365797828509 -0.403986111576232 0.111529908103868 0.641916582197816 2.26281791330736 1.33092357003949 0.939329670474797 0.185883180173113 0.205710719391578 0.651830351807049 -0.28502087626544
MMP1322 -0.00956766164026592 0.368354973150238 1.21549634352255 -0.0586834057531572 0.61008815390396 0.731414604369899 -0.942414671566192 -0.937630840746059 0.851521885983666 0.186569401985185 -0.425760942991833 -0.12916343214359 0.00956766164026592 0.406625619711301 -0.746277607940741 -0.569275867595822 -1.83220720411092 0.148298755424122 1.37295944537816 1.42558158439962 0.779764423681672 0.243975371826781 -0.310949003308642 -0.904144025005128 -1.16725472011244 -0.559708205955556 -0.263110695107313 -0.172217909524786 0.177001740344919 0.669736314818614 2.20056217726116 1.58823183228414 1.19117387421311 0.397057958071035 0.330084326589174 0.698439299739411 -0.119595770503324
MMP1323 -0.0502918000853572 0.308310600523276 1.15204281416129 0.030810103677892 0.676009296506148 0.797782253342826 -0.767496601302624 -0.876826601488183 0.776243001317468 0.181487800308028 -0.365162200619767 -0.194607400330295 0.0502918000853572 0.391401400664301 -0.605688201027996 -0.50073140084986 -1.83455740311368 0.098397000167003 1.30102700220815 1.33163940226011 0.671286201139332 0.229593000389674 -0.317057000538121 -0.79810900135458 -1.10860620188157 -0.369535400627189 -0.317057000538121 -0.233966200397096 0.212100200359984 0.758750201287779 2.25438460382622 1.69461500287616 1.309773402223 0.579449000983462 0.443879800753369 0.758750201287779 -0.190234200322873
MMP1324 0.0596049105438715 0.271533481366526 1.17623958267723 0.0704938534948822 0.620941105081833 0.747936727098208 -1.03977455059865 -1.01328347924581 0.752787944276303 0.218551338660862 -0.320100445513384 -0.0993415175731191 -0.00220758927940265 0.426064730924711 -0.695390623011834 -0.496707587865595 -1.96254686938895 -0.218551338660862 1.17664508592161 1.35325222827382 0.637993301747365 0.289194195601747 -0.311270088395773 -0.810185265540771 -1.12807812177475 -0.456970980836348 -0.311270088395773 -0.262703124248915 0.103756696131924 0.757203122835108 2.29810043985816 1.73295758433108 1.3311763354798 0.518783480659622 0.426064730924711 0.721881694364666 -0.240627231454888
MMP1325 0.209011422408396 0.411280540868135 1.21453183040561 0.250928438428935 0.686961846958222 0.720180221106099 -0.820313647086718 -1.09899554363125 0.721426522506401 0.226990899604818 -0.231485768903923 -0.141588382921817 0.114619167127185 0.424765148765451 -0.725921391805506 -0.451734364560083 -2.00246427275141 -0.182042206613765 0.977634072555403 1.3102544006892 0.48319844965382 0.137093513622712 -0.289919069792292 -0.793344431292086 -1.11248015152856 -0.586580443533242 -0.132598644323606 -0.213506291707502 0.0471961276406056 0.815818777787612 2.16877443681831 1.63837985952388 1.43611074106414 0.658498352318927 0.55961122773861 0.928190510265245 -0.137093513622712
MMP1326 0.0332419992642937 0.299177993378644 1.3031397851869 0.300160212329611 0.583412616968247 0.625676792055451 -0.885801509807357 -0.701992807993027 0.737190218978749 0.291356346492928 -0.232693994850056 -0.138834232221462 -0.0958151743500231 0.0801718805785908 -0.443878460764393 -0.424324343550102 -1.39811938082177 0.0684394102500165 1.13609421015027 0.85842574570735 0.615954692250149 0.240515641735772 -0.209229054192908 -0.748922689307324 -0.971839625550235 -0.565113987492994 -0.146655879107178 -0.170120819764327 0.0684394102500165 0.741101042421607 1.85959654707902 1.34727867606461 0.999215389650241 0.475165048307258 0.357840345021515 0.569024810935852 -0.119280115007172
MMP1327 0.0500981387820511 0.30514320894522 1.05689496125855 0.414099801905544 0.625577144090685 0.761032327772049 -0.64672142791375 -0.655830180419577 0.751472081730766 0.218610060139859 -0.186729426369463 -0.100196277564102 -0.0318806337703961 -0.0227718812645686 -0.387121981497667 -0.446328872785546 -1.24334471704545 0.0136631287587412 1.01107152814685 1.10215905320512 0.674047685431232 0.214055683886945 -0.173066297610722 -0.728700200466197 -0.737808952972025 -0.409893862762236 -0.0182175050116549 -0.136631287587412 0.118413782575757 0.592068912878785 1.6577929560606 1.00651715189393 0.715037071707456 0.236827565151514 0.150294416346153 0.359795723980185 -0.173066297610722
MMP1328 -0.0194327947184751 0.240966654509091 0.815247176931487 0.275715134325806 0.257990074174396 0.266589361783006 -0.602416636272727 -0.388655894369501 0.855042967612903 0.349790304932551 -0.0272059126058651 -0.0699580609865103 -0.0738446199302053 -0.11659676831085 -0.563551046835777 -0.423634924862757 -1.02216500219179 0.136029563029325 1.11932897578416 1.10378274000938 0.641282225709678 0.256512890283871 -0.0660715020428153 -0.571324164723167 -1.08046338634721 -0.804517701344868 -0.0233193536621701 -0.0272059126058651 0.209874182959531 0.812290819232258 1.46911928071672 0.788971465570088 0.493592985849267 0.171008593522581 0.128256445141935 0.310924715495601 -0.0427521483806452
MMP1363 -0.194219465807236 -0.0817766171819943 0.898742294733138 0.0563719784722121 0.336444084057876 0.394140680175203 -0.637176142209706 -0.790507299425945 0.701915964145451 0.238515133447483 -0.0477030266894967 0.00340735904924977 0.00681471809849948 0.0783692581327445 -0.422512522106971 -0.313477032530978 -1.15168735864642 0.834802967066192 0.889320711854188 0.480437625944216 0.0681471809849952 0.13970172101924 -0.156738516265489 -0.582658397421709 -1.29479643871491 -0.926801661395935 -0.43273459925472 -0.204441542954986 0.0988134124282431 0.463400830697968 1.57419988075339 1.3902024920939 1.34249946540441 0.885913352804938 0.497474421190465 0.262366646792232 -0.183997388659487
MMP1364 -0.274785285961208 -0.104495812971164 1.01666601219658 -0.063627426984051 0.294101449225171 0.370703544643773 -0.74308133668383 -0.990775115578441 0.727600475502917 0.290266147142121 0.0154808611809132 0.0232212917713697 0.116106458856849 0.263174640075523 -0.549570571922416 -0.367670453046687 -1.26943061683488 0.669547246074493 1.04495812971164 0.503127988379677 0.150938396513903 0.0425723682475112 -0.27091507066598 -0.727600475502917 -0.851447364950223 -1.19202631093031 -0.445074758951253 -0.104495812971164 -0.0154808611809132 0.42959389777034 1.84996291111912 1.74933731344318 1.64484150047202 1.11462200502575 0.607623801350841 0.278655501256437 -0.0735340906093374
[+] Show/hide bicluster #103 motif PSSM #1. bicluster 103 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 0.75 0.25 0 0
4 0 0 1 0
5 0 0 1 0
6 0 1 0 0 [+] Show/hide bicluster #103 motif PSSM #2. bicluster 103 motif PSSM #2 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 0 1 0
2 0 0.666667 0.333333 0
3 0 0 1 0
4 0 1 0 0
5 0.333333 0.666667 0 0
6 0.333333 0 0.666667 0
7 0.666667 0 0 0.333333
8 0 0 0.666667 0.333333
9 0.333333 0 0.666667 0
10 0 0.333333 0.666667 0
11 0 0 1 0 |