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[+] Show/hide bicluster #82 rows and columns.
bicluster 82
Methanococcus maripaludis S2
16x38
[+] Show/hide bicluster #82 rows (genes).
bicluster 82 genes
Methanococcus maripaludis S2
16
[+] Show/hide bicluster #82 rows (short gene names).
bicluster 82 short names
Methanococcus maripaludis S2
16
short_name
[+] Show/hide bicluster #82 rows (long gene names).
bicluster 82 long names
Methanococcus maripaludis S2
16
long_name
[+] Show/hide bicluster #82 rows (NCBI RefSeq gene IDs).
bicluster 82 NCBI RefSeq IDs
Methanococcus maripaludis S2
30
[+] Show/hide bicluster #82 gene upstream sequences.
bicluster 82 upstream sequences
Methanococcus maripaludis S2
16
upstream
[+] Show/hide bicluster #82 columns (arrays; conditions).
bicluster 82 arrays
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #82 ratios.
bicluster 82 ratios
Methanococcus maripaludis S2
16x38
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
Antisense_17 -0.189373379076268 -0.565328074473219 -0.110545131218579 -0.0429780616262735 0.0921560775583368 -0.0429780616262735 0.137200790619874 0.0245890079660317 -0.0204557050955051 0.891699734400614 0.463774960316015 -1.10152881857239 -0.763693470610862 -0.43711930091472 -0.0317168833608893 0.565125564704473 1.08313976491215 1.78133281736597 0.88043855613523 0.148461968885258 0.306118464600637 0.88043855613523 1.06061740838138 2.4682646915544 2.29934701757364 1.9727728478775 2.2543023045121 1.15070683450445 -0.347029874791647 -0.808738183672399 -1.03396174898008 -0.617298153160867 -0.92134996632624 -0.718648757549325 -0.335768696526262 -0.51594754877241 -0.245679270403189 0.227290216742947
MMP0110 -0.747552271980289 -1.02376216309179 0.609116666058013 0.304558333029007 -0.318401893621234 -0.0692178029611378 -0.318401893621234 -0.51221174191242 -0.332245454213462 0.470681060135738 0.498368181320193 -1.23207689270825 -0.276871211844551 -0.235340530067869 -0.276871211844551 0.719865150795834 0.553742423689103 2.51952802778542 0.692178029611379 -0.0276871211844551 0.4014632571746 0.733708711388061 1.0521106050093 2.35340530067869 2.92099128496002 1.57816590751394 2.68565075489215 0.706021590203606 -0.263027651252324 -0.304558333029007 -0.830613635533654 -0.51221174191242 -0.304558333029007 0.152279166514503 -0.51221174191242 -0.415306817766827 -0.816770074941427 0.0276871211844552
MMP0196 -0.269138585393123 -0.123593309686557 0.216660965992744 1.21524893273036 -0.377094041256649 -0.539027225051937 0.041233350214514 -0.566016089017819 -0.120699833580775 0.540527333583321 0.324616421856269 -1.14627666428427 -0.700960408847226 -0.57951052100076 -0.40408290522253 -0.0127443777172489 1.09379904488389 2.14636473955327 0.904876997122721 0.392088581770973 0.459560741685677 0.972349157037424 1.18826006876448 2.99651395447853 2.61866985895619 2.05190371567268 2.33528678731444 1.14777677281565 -0.0397332416831304 -0.458060633154293 -1.14627666428427 -0.862893592642515 -0.835904728676634 -0.431071769188412 -0.795421432727811 -0.9573546165231 -0.660477112898404 0.122199942112158
MMP0198 -0.324139510602104 -0.929362189229381 -0.108046503534035 0.0945406905922804 -0.283622071776841 0.0270116258835087 -0.108046503534035 -0.0135058129417544 -0.607761582378946 0.175575568242806 -0.202587194126315 -0.985924344748067 -0.540232517670174 -0.607761582378946 -0.540232517670174 0.702302272971226 0.648279021204209 1.76926149536982 0.351151136485613 0.0675290647087717 0.364656949427367 0.918395280039295 1.51265104947649 2.7821974660014 2.20144750950596 2.74168002717613 2.56610445893333 0.486209265903156 -0.418680201194385 -0.850866215330524 -0.93190109298105 -1.13448828710736 -1.06695922239859 -0.324139510602104 -0.661784834145963 -0.229598820009824 -0.864372028272278 0
MMP0201 -0.35699711642114 -0.922759058826514 0.200266675065517 -0.374411609905098 -0.478898570808846 -0.217681168549476 -0.391826103389056 -0.235095662033434 -0.217681168549476 0.409240596873014 0.287339142485308 -0.774944960036133 -0.879431920939881 -0.670457999132385 -0.949089894875713 0.740115973068217 0.827188440488007 2.60346677585173 0.757530466552175 0.322168129453224 0.513727557776762 0.931675401391755 1.19289280365113 2.29000589314048 2.60346677585173 2.01137399739715 2.35966386707631 0.61821451868051 -0.409240596873014 -0.635629012164469 -0.809773947004049 -0.705286986100301 -0.287339142485308 0.0783652206778111 -0.426655090356972 -0.0783652206778113 -0.879431920939881 0.200266675065517
MMP0208 -0.140989724852864 -1.63803383603892 0.105404031246899 -0.169977225570483 -0.329408479517388 -0.112002224135245 -0.112002224135245 -0.387383480952627 -0.068520973058816 0.975029052775473 0.685154045599282 -0.894664743510961 -0.60478973633477 -0.517827234181913 -0.329408479517388 1.09097905564595 0.888066550622616 2.67079784475619 0.801104048469758 0.366291537705471 0.598191543446424 1.30838531102809 1.467816564975 2.27946658506833 2.80124159798548 2.46788533973286 2.55484784188572 0.873572800263806 -0.169977225570483 -0.561308485258341 -0.981627245663819 -0.735233489564056 -0.575802235617151 -0.0975084737764352 -0.314914729158579 -0.0540272227000064 -0.836689742075723 0.163379032682137
MMP0436 -0.0683165517129778 -1.08834876884688 0.022772183904326 -0.144223831394064 -0.235312567011368 -0.220131111075151 -0.523760229799497 -0.857752260396277 -0.432671494182193 0.67557478916167 0.159405287330282 -1.38910321816388 -0.614848965416801 -0.614848965416801 -0.690756245097887 -0.0075907279681086 0.84257080446006 2.64916406086992 0.660393333225452 0.129042375457847 0.493397317927062 0.903296628204929 1.16138137912062 2.23926475059205 2.70988988461479 1.85972835218662 2.39107930995422 0.827389348523843 -0.326401302628672 -0.614848965416801 -0.903296628204929 -0.67557478916167 -0.387127126373541 0.220131111075151 -0.356764214501107 0.00759072796810866 -0.933659540077364 -0.0227721839043259
MMP0437 -0.149108901420612 -0.184194837271378 0.357861363409469 -0.164019791562673 -0.298217802841224 -0.253485132415041 -0.447326704261837 -0.670990056392755 -0.477148484545959 0.656079166250694 0.596435605682449 -1.43144545363788 -0.626257385966571 -0.566613825398326 -0.536792045114204 0.984118749376041 0.820098957813368 2.63922755514484 0.596435605682449 0.357861363409469 0.536792045114204 0.954296969091918 1.2674256620752 1.86386126775765 2.43047509315598 1.58055435505849 2.50502954386629 0.700811836676878 -0.387683143693592 -0.641168276108633 -0.924475188807796 -0.760455397245122 -0.268396022557102 0.223663352130918 -0.328039583125347 0.0149108901420612 -1.01394052966016 -0.0149108901420612
MMP0475 -0.493138465328972 -1.00324175685757 0.328758976885981 0.0136982907035826 -0.301362395478816 -0.0136982907035825 -0.191776069850156 -0.287664104775234 -0.0410948721107476 1.10956154699019 0.410948721107476 -0.75340598869704 -0.726009407289875 -0.739707697993458 -0.780802570104205 0.80819915151137 0.876690605029283 2.5889769429771 1.27394103543318 0.547931628143302 0.616423081661215 1.01367351206511 1.1780530005081 2.34240771031262 2.54788207086635 2.08214018694455 2.53418378016277 0.739707697993458 -0.602724790957632 -1.01367351206511 -1.32873419824751 -1.39722565176542 -0.876690605029283 -0.369853848996729 -0.80819915151137 -0.383552139700311 -1.20544958191526 -0.0547931628143302
MMP0497 -0.59073677303472 -1.19559200878329 0.0182702094753006 -0.0182702094753006 -0.29841342142991 -0.0426304887757014 -0.140071605977305 -0.103531187026703 -0.31059356108011 0.773438867787726 -0.493295655833116 -0.761258728137525 -0.334953840380511 -0.359314119680912 -0.28623328177971 1.35808557099735 0.566376493734319 2.25941590511218 0.797799147088127 0.249692862829108 0.468935376532716 1.02922180044193 1.38244585029775 2.08889395000937 2.51519883776638 2.25941590511218 2.39339744126438 0.432394957582114 -0.225332583528707 -0.627277191985321 -0.919600543590131 -0.992681381491333 -0.456755236882515 -0.0182702094753006 -0.468935376532716 -0.0426304887757014 -0.931780683240331 0.127891466327104
MMP0501 -0.0802663912357481 -0.141637405088007 0.494976079287113 -0.040133195617874 -0.280932369325118 -0.280932369325118 0.0133777318726247 -0.22742144183462 -0.240799173707244 0.387954224306116 0.414709688051365 -1.15048494104572 -0.601997934268111 -0.307687833070368 0 0.187288246216746 1.11035174542785 2.54176905579869 0.896308035465854 0.615375666140735 0.82941937610273 1.40466184662559 1.63208328846021 2.63541317890706 2.87621235261431 2.47488039643557 2.34110307770932 1.01670762231948 -0.321065564942992 -0.749152984866982 -0.963196694828977 -0.695642057376484 -0.535109274904987 -0.187288246216746 -0.42808741992399 -0.548487006777612 -0.62875339801336 -0.0133777318726247
MMP0740 -0.336573763493723 -0.84686647626449 0.323628618743964 -0.168286881746861 -0.103561157998068 0.207122315996137 -0.220067460745896 -0.220067460745896 -0.220067460745896 1.2168436064773 -0.194177171246378 -0.996776145731409 -0.763763540235755 -0.401299487242515 -0.504860645240584 0.491915500490825 0.608421803238652 2.38190663395558 0.919105277232858 0.375409197742998 0.72492810598648 1.10033730372948 1.26862418547634 2.22656489695847 2.47252264720389 2.47252264720389 2.43368721295461 0.63431209273817 -0.297738329244447 -0.724928105986479 -1.07444701422996 -1.03561157998069 -0.569586368989377 0.0129451447497586 -0.440134921491791 -0.0906160132483099 -0.919105277232858 0.0776708684985514
MMP0831 -0.361545066480938 -0.565968136651495 0.154947885634688 0.317274242013885 -0.14019094414567 -0.450086715415046 -0.258246476057813 -0.848524135618528 -0.243489534568795 0.951822726041654 -0.0221354122335268 -1.49782956113532 -1.12890602390987 -0.523871422860135 -1.14366296539889 -0.287760359035849 0.70095472072835 2.29470440154228 0.523871422860135 0.302517300524867 0.582899188816207 1.0698782579538 1.3207462632671 3.00303759301514 2.73741264621282 2.32421828452032 1.99956557176192 0.951822726041654 -0.228732593079777 -0.656683896261296 -0.9075519015746 -0.671440837750314 -0.435329773926028 0.0221354122335268 -0.641926954772278 -0.892794960085582 -0.833767194129511 0.243489534568795
MMP0838 -0.550575563354834 -0.94697696414344 0.579938154985015 -0.264178754708739 -0.399840400909521 0.0523650864264189 -0.143590624752488 -0.520428530865772 -0.264178754708739 1.10751122354361 0.0975856351600129 -1.7866038954064 -1.0630751156689 -1.03292808317984 -0.942486985712649 1.07736419105455 0.836187931142048 2.10236329568268 1.06229067481002 0.474423541273296 0.670379252452203 1.07736419105455 1.16780528852174 1.9667016494819 2.19280439314987 1.83104000328112 2.35861307183971 0.715599801185797 -0.50535501462124 -1.03292808317984 -1.27410434309234 -1.45498653802671 -0.761604790778273 -0.249105238464208 -0.550575563354834 0.0222180539373562 -1.00278105069077 -0.0380760110407691
MMP1172 -0.186376361123521 -1.23053327068836 0.210424923849137 0.0781578288582507 -0.342692018840023 0.234473486574752 -0.0901821102210586 -0.282570612025983 -0.486983395193716 0.63127477154741 -0.114230672946674 -1.40082877876711 -0.547104802007755 -0.547104802007755 -0.450910551105293 -0.00601214068140391 0.559129083370563 2.17038278598681 0.655323334273025 0.114230672946674 0.390789144291254 0.883784680166374 1.24451312105061 1.86977575191661 1.89382431464223 2.14633422326119 2.25455275552646 0.511031957919332 -0.462934832468101 -0.751517585175488 -1.20844027696218 -1.2324888396878 -1.06414890060849 -0.595201927458986 -0.667347615635833 -0.270546330663176 -1.08819746333411 -0.0541092661326352
MMP1678 -0.558349400141788 -0.051959250711328 -0.29034168807373 0.230784418725272 -0.215895101388158 -0.379677592096416 -0.275452370736616 -0.424345544107759 0.0670019280170146 0.945471650906762 0.335009640085073 -1.24325799764905 -0.707242573512932 -0.662574621501589 -0.00744465866855718 -0.424345544107759 1.07947550694079 2.52373928864088 0.97525028558099 0.275452370736616 0.424345544107759 0.930582333569647 1.12414345895213 2.94064017408008 2.91086153940586 2.3301781632584 2.04728113385322 0.960360968243876 0.00744465866855717 -0.573238717478903 -1.04969687226656 -0.900803698895418 -0.751910525524275 -0.409456226770645 -0.409456226770645 -0.379677592096416 -0.766799842861389 0.260563053399501
[+] Show/hide bicluster #82 motif PSSM #1. bicluster 82 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0.25 0.75 0
2 0 0 1 0
3 0 0.083333 0.916667 0
4 0 0 1 0
5 0.666667 0 0.333333 0
6 0 0 0.5 0.5 [+] Show/hide bicluster #82 motif PSSM #2. bicluster 82 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 0 1
2 0 0.666667 0.333333 0
3 0 0 1 0
4 0 0 1 0
5 0 0 1 0
6 0 1 0 0 |