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[+] Show/hide bicluster #73 rows and columns.
bicluster 73
Methanococcus maripaludis S2
17x39
[+] Show/hide bicluster #73 rows (genes).
bicluster 73 genes
Methanococcus maripaludis S2
17
[+] Show/hide bicluster #73 rows (short gene names).
bicluster 73 short names
Methanococcus maripaludis S2
17
short_name
[+] Show/hide bicluster #73 rows (long gene names).
bicluster 73 long names
Methanococcus maripaludis S2
17
long_name
[+] Show/hide bicluster #73 rows (NCBI RefSeq gene IDs).
bicluster 73 NCBI RefSeq IDs
Methanococcus maripaludis S2
30
[+] Show/hide bicluster #73 gene upstream sequences.
bicluster 73 upstream sequences
Methanococcus maripaludis S2
17
upstream
[+] Show/hide bicluster #73 columns (arrays; conditions).
bicluster 73 arrays
Methanococcus maripaludis S2
39
[+] Show/hide bicluster #73 ratios.
bicluster 73 ratios
Methanococcus maripaludis S2
17x39
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_minus30m
MMP0128 -0.48347986863796 0.758764965812681 -0.328069495313139 -0.895683068164874 -0.636254563545899 -0.68628460104668 -0.216002197773953 5.43302638581844 0.132956963875439 -0.24173993431898 0.024173993431898 -0.0483479868637961 0.024173993431898 -0.132956963875439 0.459305875206062 0.374696898194419 -0.676871816093145 -0.459305875206062 -0.531827855501756 0.229652937603031 0.435131881774164 0.531827855501756 1.45043960591388 0.145043960591388 0.060434983579745 0.386783894910368 0.797741783252634 0.882350760264277 1.34165663547034 1.69217954023286 1.28122165189059 1.70426653694881 -0.108782970443541 0.084608977011643 -0.423044885058215 -0.543914852217705 -0.12086996715949 0.024173993431898 -0.060434983579745
MMP0182 0.104187440040441 -0.905608588239263 -0.740367510756435 -1.05561593787477 -1.36288906650786 -1.73477109501945 1.32191996337475 4.74448916867502 -0.229212368088971 0.193490960075105 0.455447952176786 0.372098000144433 0.598333584232248 -0.437587248169853 0.175630256068172 -0.544751472211449 -0.276840912107458 -0.175630256068172 0.0684660320265756 -0.0982338720381302 0.00297678400115546 -0.110141008042752 0.526890768204517 0.431633680167542 0.247073072095903 0.407819408158298 0.765033488296954 0.949594096368592 1.36634385653036 1.86644356872447 1.56876516860893 1.27704033649569 0.61024072023687 -0.28874804811208 -0.514983632199895 -0.93768696036397 -1.03294404840095 -0.253026640098214 -0.00297678400115546
MMP0311 -0.280248794131846 0.21725564137588 -0.186554929745054 -0.533199925191555 -0.681150474791684 -0.940913868442243 2.57174701240057 5.32979713218199 0.00418281782286338 -0.204958073320305 0.0376453604057704 0.188226802028852 0.154764259445945 0.154764259445945 0.313711336714753 0.455927142692108 0.0711079029886774 0.121301716863038 0.0711079029886774 -0.230054980257486 0.0376453604057704 -0.238420615903213 1.1084467230588 0.8909401962699 0.648336762543824 0.982962188372894 1.38451269936778 1.20883435080752 1.55182541228231 1.56855668357377 1.8278913885913 1.67730994696821 0.288614429777573 -0.34717387929766 -0.405733328817748 -0.330442608006207 -0.573046041732283 -0.547949134795103 -0.188226802028852
MMP0312 -0.495522422462664 0.361274385579018 -0.0389674572458016 -0.341205125432692 -0.745211002889045 -0.669512181954837 2.24942334211166 5.57794107511387 -0.143562570993856 -0.254707787247164 0.226921483183837 0.384377206209357 0.189873077766068 0.236183584538279 0.421425611627126 0.588143436007088 0.0694657601583175 -0.171348875057183 -0.301018294019375 -0.643716044133742 -0.0879899628672021 -0.338066699437145 0.782647564450377 0.782647564450377 0.652978145488184 1.1809179226914 1.68107139583128 1.54213987551465 1.68107139583128 1.49582936874244 1.82926501750236 1.6625471931224 0.421425611627126 -0.00463105067722117 -0.263969888601606 -0.254707787247164 -0.301018294019375 -0.106514165576087 0.0416794560949905
MMP0313 -0.18664625285092 0.0130818542605615 -0.239907536763579 -0.610735938635282 -0.834417438896693 -0.915659528447352 2.30820895990225 5.48834338611465 0.0756673998044272 -0.348070039100365 0.237091186053872 0.237091186053872 0.196735239491511 0.297625105897414 0.18664625285092 0.630561665036893 -0.196735239491511 -0.52967179863099 -0.580116731833942 -0.630561665036893 0.00504449332029515 -0.00504449332029508 0.337981052459775 0.489315852068629 0.479226865428039 1.12492201042582 1.54865944933061 1.49821451612766 1.50830350276825 1.11483302378523 1.72017222222064 1.72017222222064 0.307714092538004 -0.196735239491511 -0.408603958943907 -0.337981052459775 -0.136201319647969 0.0756673998044272 -0.156379292929149
MMP0456 -0.495387602078093 1.02777428290545 0.348991464198003 -0.780976231479084 -1.31906588271089 -1.58852208844096 1.22431276124772 4.30063876230526 0.351896020786508 -0.119576317742988 0.638879183369679 0.105910452858075 0.228903236822291 0.0922445879731622 -0.030748195991054 -0.857533021528285 -0.857533021528285 0.297232561246856 -0.515886399405463 -0.338230155901595 -0.160573912397727 -0.263067899034574 1.01469046770478 0.38606068299879 0.823368359316003 1.12401738678409 1.1855137787662 1.14451618411146 1.27434190051813 1.37000295471252 1.56815799554376 1.47249694134937 0.932695278395307 -0.290399628804399 -0.201571507052465 -0.584215723830027 -0.304065493689312 -0.194738574610009 -0.290399628804399
MMP0520 -0.430990887088659 -0.0301129168177802 0.0104129722765853 -0.328517651163062 -0.505636232713123 -0.179388169876281 0.274851750643891 4.55908060579201 -0.00484259423695122 -0.130750044397683 0.169490798293293 0.23728711761061 0.00484259423695116 -0.150120421345488 0.0435833481325609 0.401935321666951 -0.653750221988415 -0.479416829458171 -0.392250133193049 0.150120421345488 0.314768625401829 0.401935321666951 1.50604680769183 0.576268714197195 0.0726389135542682 0.198546363715 0.595639091145 0.818398426044756 1.72880614259159 1.8062876503828 1.22517634194866 2.06778773917817 0.547213148775488 -0.111379667449878 -0.527842771827683 -0.711861352831829 -0.246972306084512 -0.314768625401829 -0.101694478975976
MMP0559 -0.326332778690118 0.0704900606933596 -0.154894476404206 -0.384074493634213 -0.835513358440952 -0.561903904724307 1.97582105751261 3.72676532206469 0.355999394934675 -0.0444999243668344 0.622998941135681 0.763915368297323 0.800998638603018 0.808415292664157 0.711998789869349 0.192833005589616 -0.919665103581243 -0.875165179214409 -0.266999546201006 -0.23733292995645 0.496915822096317 0.177999697467337 0.689748827685932 0.0964165027948078 -0.289249508384423 0.244749584017589 1.0828314929263 1.60941393126718 2.01732990462982 2.05441317493552 2.04699652087438 1.53524739065578 -0.15574973528392 -0.229916275895311 -0.949331719825799 -1.05316487668175 -0.986414990131495 -0.852915217030991 -0.222499621834172
MMP0678 0.0330236970695523 -0.0726795212057847 -0.454998560834063 -0.850075370153747 -1.10274559317862 -1.4328737287765 2.17484279025075 6.11409577346111 0.291709324114379 -0.247677728021642 -0.324733021183931 0.0165118485347762 -0.220157980463682 -0.0770552931622887 0 0.236669828998458 -0.0825592426738807 0.506363355066468 0.104575040720249 0.0935671416970648 0.231165879486866 0.754041083088111 1.13931754889955 0.605434446275125 0.627450244321494 0.682489739437414 0.798072679180847 1.07877410427204 1.11179780134159 1.18885309450388 1.4530426710603 1.11179780134159 -0.0220157980463682 -0.0880631921854728 -0.341244869718707 -0.451323859950548 -0.159614535836169 0 0.148606636812985
MMP0691 -0.725405633776988 0.914843557120546 -0.239004720861727 -0.65757158687014 -0.696144771994582 -0.988950308326091 1.3209777542159 4.8210957626973 0.683046180709719 -0.333580692904746 -0.0688341112343127 0.121783427568399 0.0794239745011301 -0.28063137657066 0.503018505173824 0.195912470436121 0.0476543847006781 0.142963154102034 0.0794239745011301 0.227682060236573 0.746585360310623 0.59832727457518 1.11723057464923 0.195912470436121 -0.23827192350339 -0.291221239837477 0.100603701034765 0.534788094974276 1.47728592572102 1.62554401145646 1.20194948078377 1.50905551552147 0.153553017368851 -0.0264746581670434 -0.428889462306102 -0.630096864375632 -0.428889462306102 -0.450069188839737 0.00529493163340867
MMP0848 -0.0589392643125734 0.840941867209517 -0.213405392343297 -0.646174209734299 -0.48590041288564 -0.65844609148177 2.07877600551234 3.76549505823631 0.196464214375245 -0.17681779293772 0.314342743000391 0.451867693063063 0.216110635812769 0.402751639469251 0.569746221688209 0.599215853844496 -0.569746221688209 -0.324165953719154 0.363458796594203 -0.00982321071876224 0.982321071876223 0.481337325219349 1.15913886481394 0.392928428750489 0.510806957375636 0.579569432406972 1.03143712547003 1.25737097200157 1.49312802925186 1.30648702559538 2.02358140806502 2.22004562244026 -0.0491160535938112 -0.402751639469252 -0.766210436063454 -1.38507271134547 -0.825149700376027 -0.962674650438699 -0.127701739343909
MMP0976 -1.69815030850013 -0.727322325747503 0.11021460977295 -0.386374014222279 -0.952339007379479 -1.05001361103725 0.993165633855313 3.39303974387036 -0.166782619584834 0.773264872620595 0.53067197140629 0.576158140383972 0.727778703642913 0.576158140383972 0.257754957540198 0.591320196709866 -0.22743084488841 0 -0.545834027732184 -0.45486168977682 -0.68229253466523 -0.212268788562516 1.36458506933046 0.409375520799138 0.394213464473244 0.697454590991124 0.818751041598276 0.742940759968806 1.74363647747781 1.68298825217424 1.36458506933046 2.0317155476698 0.106134394281258 -0.272917013866092 -0.849075154250065 -1.04618188648669 -1.50104357626351 -1.30393684402688 0
MMP1227 -0.309159549418717 0.254995148326814 -0.0648665534326269 -0.127006205488163 -1.04607169016968 -0.328745301529672 2.13479118868616 3.56471905679091 0.00475630076028796 -0.0903697144454712 -0.0237815038014398 0.214033534212958 0.223546135733534 0.290134346377565 0.917966046735576 0.451848572227356 -0.879915640653273 -0.727714016324058 -0.585024993515419 -0.00475630076028796 0.0618319098837435 0.546974587433115 1.94532701095778 0.889428242173848 0.585024993515419 0.318672150939293 0.537461985912539 0.813327430009241 1.8977640033549 2.25924286113678 2.07850343224584 1.84068839423144 0.556487188953691 -0.0903697144454712 -0.69917621176233 -0.661125805680026 -0.604050196556571 -0.689663610241754 -0.128420120527775
MMP1387 -0.216794539874852 0.390128149870153 -0.156740388766675 -0.949548690894365 -1.18485322887801 -1.60301127475079 2.26905966488396 5.19713278525871 -0.056205991819406 -0.264971104291485 0.10438255623604 0.17664740286099 0.0963531288332674 0.136500265847129 0.859148732096634 0.546001063388515 -0.0401471370138614 -0.10438255623604 0.152559120652673 0.0321177096110891 0.521912781180198 0.746736748457822 0.706589611443961 0.883237014304951 0.578118772999604 0.337235950916436 0.714619038846733 0.762795603263367 1.17229640080475 1.27667895704079 1.31682609405465 1.25259067483248 -0.0401471370138614 -0.208765112472079 -0.658413047027327 -0.762795603263367 -0.730677893652278 -0.674471901832872 -0.256941676888713
MMP1683 0 -0.343653613882936 -0.0965807914729709 -0.634092567450582 -1.20230299564089 -1.55162859046475 1.07533183099136 4.92818428469025 -0.0227461843238288 -0.0454923686476577 0.257790089003393 0.333610703416156 0.181969474590631 0.295700396209775 -0.242625966120841 0.280536273327222 -0.689967591156141 -0.356356887739985 -0.159223290266802 0.189551536031907 0.439759563594024 -0.363938949181261 1.44817373528377 1.1828015848391 0.697549652597417 0.204715658914459 0.606564915302102 1.00841417168974 1.92584360608417 1.94100772896673 1.89551536031907 1.53157641113781 -0.00758206144127628 -0.083402675854039 -0.492833993682958 -0.568654608095721 -0.629311099625931 -0.780952328451456 -0.083402675854039
Unanno_13 -0.631125051161538 -0.174016240111321 -0.610987653291766 -1.12624577749841 -1.03613104629159 -0.988818970480606 1.59597302777873 5.13876072326319 -0.213649336385424 -0.194003420395959 0.00736721849604903 -0.0319246134828794 -0.125242714432835 -0.213649336385424 0.24311821036962 0.29223300034328 0.110508277440736 -0.00736721849604909 0.0417475714776115 0.174357504406495 0.734266110106226 0.749000547098324 1.01422041295609 0.444488849261628 0.336436311319575 0.680239841135199 1.08298111891922 1.33346654778488 1.85899480050305 1.89828663248198 1.96213585944774 1.79514557353729 0.341347790316941 -0.130154193430201 -0.385551101293236 -0.577098782190512 -0.390462580290602 -0.272587084353816 -0.198914899393325
Unanno_30 -0.33842196943816 -0.588396889222169 -0.499979311525701 -0.70523889580006 -1.00080264744318 -1.21310546138939 2.78442567239954 4.89600853962108 0.0877390291135971 -0.146231715189329 0.0125341470162282 0.288285381373248 0.196368303254241 0.171300009221785 0.622529301805999 0.313353675405704 -0.714446379925005 -0.488831733632898 -0.371846361481435 -0.213080499275879 0.0208902450270469 0.363490263470617 1.32444153471478 1.09047079041185 0.781295164011555 0.40527075352471 0.722802477935824 1.07375859439021 2.05142206165601 1.8258074153639 1.959504983537 1.76731472928817 0.672665889870911 -0.0877390291135971 -0.296641479384066 -0.355134165459798 -0.421982949546348 -0.321709773416523 -0.00417804900540938
[+] Show/hide bicluster #73 motif PSSM #1. bicluster 73 motif PSSM #1 Methanococcus maripaludis S2 10x4
POSITION A C G T
1 0 0 0 1
2 0.6 0.4 0 0
3 0 0 0 1
4 0 1 0 0
5 1 0 0 0
6 0 0.8 0 0.2
7 0 1 0 0
8 0.2 0.6 0.2 0
9 0 1 0 0
10 0 0.6 0.2 0.2 [+] Show/hide bicluster #73 motif PSSM #2. bicluster 73 motif PSSM #2 Methanococcus maripaludis S2 15x4
POSITION A C G T
1 0 0.75 0.25 0
2 0.5 0 0.5 0
3 0 0.5 0.5 0
4 0 0 1 0
5 0 0 1 0
6 0.5 0.25 0.25 0
7 0.75 0.25 0 0
8 0 0.5 0.5 0
9 0.25 0 0 0.75
10 0.75 0 0 0.25
11 0.25 0 0.25 0.5
12 0 0 0 1
13 0 0 1 0
14 0 0.25 0.75 0
15 1 0 0 0 |