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[+] Show/hide bicluster #60 rows and columns.
bicluster 60
Methanococcus maripaludis S2
18x38
[+] Show/hide bicluster #60 rows (genes).
bicluster 60 genes
Methanococcus maripaludis S2
18
[+] Show/hide bicluster #60 rows (short gene names).
bicluster 60 short names
Methanococcus maripaludis S2
18
short_name
[+] Show/hide bicluster #60 rows (long gene names).
bicluster 60 long names
Methanococcus maripaludis S2
18
long_name
[+] Show/hide bicluster #60 rows (NCBI RefSeq gene IDs).
bicluster 60 NCBI RefSeq IDs
Methanococcus maripaludis S2
36
[+] Show/hide bicluster #60 gene upstream sequences.
bicluster 60 upstream sequences
Methanococcus maripaludis S2
18
upstream
[+] Show/hide bicluster #60 columns (arrays; conditions).
bicluster 60 arrays
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #60 ratios.
bicluster 60 ratios
Methanococcus maripaludis S2
18x38
GENES ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
MMP0080 1.13568006465137 0.715233986428516 0.645793314513713 0.879581701272595 0.912652108562516 0.982021046624104 -4.04719119361849 -3.16433334612115 -1.09142597741664 0.16681183060953 0.238302615156471 -0.0142981569093883 -0.171577882912659 -0.371752079644095 -0.0953210460625884 -0.185876039822047 0.338389713522189 0.32885760891593 0.514733648737977 0.0238302615156471 0.0428944707281647 -0.366986027340965 -0.185876039822047 -0.104853150668847 -0.557628119466142 -1.215343337298 -1.28206806954181 -1.47747621397012 -1.31543043566372 0.0142981569093883 1.0199351928697 1.14385255275106 0.862655466866424 1.06282966359786 0.800696786925742 1.0199351928697 1.01516914056657 0.119151307578235
MMP0081 1.1850186257392 0.812460887924702 0.829704431367558 0.904183597759915 1.03889374219131 1.02415982014412 -2.6299337520766 -3.29012678420589 -1.09453993180259 -0.341539487319237 0.223210846043281 -0.0242035857155365 -0.190939398422565 -0.422218106371025 -0.0995036301638722 -0.196317973026018 0.379189509543404 0.416839531767572 0.545925322250433 0.0672321825431567 0.029582160318989 -0.38994665875031 -0.142532226991492 -0.131775077784587 -0.626603941302222 -0.997725588940447 -1.27203289371653 -1.64315454135475 -1.41725440800975 0.0941250555604195 1.29892576673379 1.37422581118213 1.36884723657867 1.47641872864772 1.06764705878533 1.12681137942331 1.12143280481986 0.164046525405303
MMP0224 0.9999647210332 0.38752938445333 0.489887051533293 0.601938769875083 0.702300614293175 0.799668705775574 -3.52102267767367 -3.47340782535031 -1.00397305504112 0.350443424872844 0.397800644450255 0.0473572195774113 0.142071658732234 -0.0568286634928935 0.0568286634928936 -0.284143317464468 0.520929415351524 0.606172410590865 0.416743532281219 0.00947144391548227 0.0284143317464468 -0.738772625407616 -0.255728985718021 -0.20837176614061 -0.625115298421829 -1.66697412912488 -1.72380279261777 -1.78063145611066 -1.4964881386462 -0.312557649210915 -0.0284143317464468 1.16498760160432 0.520929415351524 0.928201503717261 0.691415405830205 0.861901396308886 0.767186957154063 -0.255728985718021
MMP0297 1.50808475568018 0.274168924876661 0.359788699322968 0.576178225737108 0.407554076456563 0.564890731356726 -3.94074659558434 -3.61106917282762 -1.55014960624995 0.28808090027654 -0.169190370003682 -0.553298237039068 -0.699625043528739 -0.983133231102476 -0.653897916500717 -0.242353773248517 0.781933872179179 0.772788446773574 0.84595185001841 0.260644624059726 0.260644624059726 -0.544152811633464 -0.160044944598078 -0.297226325682144 -0.937406104074454 -0.937406104074454 -1.0288603581305 -1.11116918678094 -0.745352170556761 0.114317817570055 0.434407706766211 1.0380057835361 0.800224722990388 0.919115253263246 0.480134833794233 0.699625043528739 0.498425684605442 0.141754093786869
MMP0417 1.09985665936332 0.560670150753467 1.20430491453975 1.03406921651518 0.93318088815576 0.664904807955715 -3.7173650422975 -3.3566020610262 -0.541622589839425 0.0496684471031787 0.205769280856026 0.0543987753987194 -0.17265698278724 -0.338218473131169 -0.319297159949006 -0.0969717300585869 0.943700494960395 0.877475898822823 0.357139786313332 -0.0496684471031787 -0.437555367337526 -0.465937337110771 -0.522701276657261 -0.565274231317129 -0.210499609151567 -1.1754865814419 -1.18021690973744 -1.13764395507757 -1.03357673257567 0.139544684718454 0.451746352224149 1.22752019269284 0.754487363138762 0.726105393365517 0.536892261543884 0.707184080183353 1.20859887951068 0.201038952560485
MMP0418 0.716773034425254 0.581411082351637 0.984842777463053 0.929808076358513 0.75112093460541 0.766733616505481 -4.02503257883816 -3.8546982244948 -0.593845157478703 -0.00777963088400048 0.230795716225347 -0.0492709955986697 -0.282659922118684 -0.43306611920936 -0.396761175084024 0.10632162208134 0.733878513390711 0.676827886908041 0.0855759397240052 -0.168558669153344 -0.609404419246704 -0.697573569265376 -0.682014307497375 -0.614590839836038 0.0129660514733341 -1.0243180663934 -0.81686124282005 -0.71831925162271 -0.728692092801378 0.142626566206675 0.43306611920936 1.25770699291341 0.920589654606723 0.863539028124053 0.671641466318708 0.733878513390711 1.21102920760941 0.111508042670673
MMP0696 1.94908708345918 0.879351690302433 1.22833563360077 1.29805057154065 1.15329999098961 0.883990257300214 -3.66235105084059 -2.5189442994838 -0.385224645199876 0.321775880108131 -0.0770449290399751 -0.0407884918446927 -0.267391224315208 -0.439609300992799 -0.0498526011435134 -0.29458355221167 0.339904098705773 0.385224645199876 0.0861090383387957 -0.367096426602234 -0.75685312645152 -1.19193037279491 -0.629955596268032 -0.829366000842085 -0.657147924164494 -1.15567393559963 -1.21005859139255 -1.15567393559963 -1.11035338910552 0.0407884918446927 0.521186284682185 1.12848160770316 1.12848160770316 1.12848160770316 0.693404361359776 0.702468470658597 0.892814765933829 0.122365475534078
MMP0880 1.54048027730614 -0.839546550756569 0.171233699402534 0.57790397695767 0.780314339646017 0.626570322493011 -3.50082090311377 -4.06666826886624 -0.529926835832776 0.468486043272454 0.222722873031167 0.00768009907004022 -0.153601981400805 -0.199682575821046 0.099841287910523 -0.00768009907004024 0.307203962801609 0.460805944202414 0.0921611888404827 -0.0307203962801609 -0.360964656291891 -0.737289510723862 -0.537606934902816 -0.706569114443701 -0.576007430253017 -1.28257654469672 -0.783370105144103 -0.783370105144103 -0.821770600494305 -0.107521386980563 0.253443269311328 1.05985367166555 1.2595362474866 1.26721634655664 0.983052680965149 0.6681686190935 0.560647232112937 -0.138241783260724
MMP0893 2.18576264698392 0.748384116898702 1.01998354694842 1.09276980102367 1.07238485453995 0.988446839606982 -4.24592769991202 -2.4233935927344 -0.828541393883701 0.334603255222264 -0.246969069330719 -0.286802790190512 -0.111534418407421 -0.278836046018553 0.135434650923297 -0.310703022706388 0.621406045412776 -0.0318669766878346 0.151368139267215 -0.485971394489479 -0.557672092037107 -1.01974325401071 -0.525805115349272 -0.701073487132362 -0.788707673023908 -0.629372789584735 -0.908208835603288 -1.11534418407421 -0.83650813805566 0.462071161973602 0.653273022100611 0.89227534725937 0.924142323947205 1.23484534665359 1.10737743990225 1.25077883499751 0.971942788978957 0.637339533756693
MMP0894 2.22123084854259 0.609780375521865 0.920711595359929 1.10930725867019 1.20995551609117 1.27513724470666 -3.0661575283665 -1.96813298356652 -0.553263469291775 0.0597046909307672 0.0199015636435891 -0.314444705568707 -0.179114072792301 -0.234838450994351 0.0597046909307672 -0.513460342004597 0.67267285115331 0.346287207398449 0.187074698249737 -0.402011585600499 -0.378129709228192 -0.895570363961507 -0.601027222036389 -0.593066596578953 -0.8716884875892 -0.768200356642537 -0.983137243993298 -1.38116851686508 -1.14234975314201 0.473657214717419 0.74431848027023 1.10254662585483 1.50057789872661 1.76327853882199 1.39708976777995 1.37320789140764 0.99905849490817 0.425893461972805
MMP0955 1.96761849663267 0.325731753423452 0.737911496411516 0.971330267332409 1.04770144702184 1.11611729238456 -2.26134192124725 -4.24465276189156 -0.777265820452623 0.261161315672081 0.130580657836041 -0.0621812656362099 -0.273597568799323 -0.354433214126396 -0.0373087593817259 0.335778834435533 0.335778834435533 0.665339542307446 0.522322631344163 0.0435268859453469 -0.292251948490186 -0.621812656362099 -0.497450125089679 -0.540977011035026 -0.118144404708799 -1.90274672846802 -1.01355462987022 -0.951373364234011 -1.11304465488816 -0.435268859453469 0.0932718984543148 0.652903289180204 0.771047693889002 0.789702073579865 0.491231998526058 0.596940150107615 0.62803078292572 -0.335778834435533
MMP1017 1.12683845281641 -0.243707675639323 0.110089113169978 0.32804725795385 0.470548741797408 0.42174344012961 -2.95265173596169 -4.29138280981922 -0.879805609974561 0.0830005292428831 -0.0110667372323844 -0.116200740940036 -0.138334215404805 -0.171534427101959 0.166001058485766 -0.409469277598224 -0.0387335803133455 0.22686811326388 0.304335273890571 -0.193667901566727 -0.354135591436301 -0.536736755770644 -0.409469277598224 -0.536736755770644 -0.719337920104987 -1.44974257744236 -1.30034162480517 -1.2782081503404 -1.34460857373471 0.293268536658187 0.514603281305876 0.835538661045024 1.03473993122794 1.22840783279467 0.957272770601252 0.996006350914598 0.846605398277408 0.359668960052494
MMP1146 1.48815521878384 0.145316146532062 0.460943752432589 0.731430920668517 0.670153673058701 0.621103436272622 -3.53537091992465 -4.12191221785924 -0.344774466157378 0.467570851364116 -0.00944587578513366 -0.311713900909411 -0.316436838801977 -0.40144972086818 -0.151134012562138 -0.184194577810106 0.637596615496522 0.807622379628928 0.344774466157378 -0.0330605652479678 -0.434510286116148 -0.528969043967485 -0.510077292397217 -0.613981926033688 -0.38728090719048 -0.798176503843794 -0.916249951157965 -0.854851758554596 -0.911527013265398 0.0613981926033688 0.552583733430319 1.13822803210861 0.996539895331601 1.02960046057957 0.86429763433973 0.854851758554596 0.69899480809989 0.0802899441736361
MMP1188 1.52117419548348 0.410992987189773 0.608602265024687 0.856403935378152 0.998058003502188 1.22485322450701 -3.18138758953587 -2.9272654026331 -0.632977345702489 0.682380455610976 0.385961796160054 0.367435629944372 0.101893914186254 -0.237752466434593 0.0524908042777674 -0.657678900656733 0.534171125885515 0.515644959669832 0.404487962375737 -0.126595469140498 -0.219226300218911 -0.861466729029241 -0.645328123179611 -1.02202683623182 -0.991149892539019 -1.31844549568275 -1.46665482540821 -1.42960249297684 -1.29991932946706 -0.262454021388837 0.330383297513006 1.18258694343441 0.805888230382193 0.824414396597876 0.744134342996585 0.92322061641485 0.978799115061898 -0.330383297513006
MMP1189 0.575264817275574 -0.204785806827711 0.296931283236408 0.42303249829706 0.475593337343083 0.417134338441091 -3.80049963158453 -3.7627961912831 -0.305059787280564 -0.75644906602091 -0.0570437000605933 0.245535926347771 0.161210456692981 0.042162734827395 -0.0471230565717944 -0.597718770200129 0.161210456692981 0.0967262740157885 0.161210456692981 -0.25545656983657 -0.33482171774696 -0.617560057177727 -0.329861396002561 -0.414186865657351 -0.528274265778537 -1.02430644021848 -1.01438579672968 -0.811012605209304 -0.572917161478132 0.562996517989333 0.50843297880094 1.73859277141199 1.05902869242927 0.875496787886496 0.543155231011736 0.865576144397698 1.81299759757799 0.602679091944529
MMP1255 1.78199303869096 -0.0823411216356785 0.381710858011004 0.728288541150382 1.04264633228654 0.883970487729452 -3.36078636855057 -2.25276426072881 -0.198909329316709 0.340987421685787 0.340987421685787 -0.0473593641230259 0.0378874912984208 -0.0757749825968415 0.265212439088945 0.227324947790525 0.350459294510392 0.265212439088945 0.047359364123026 -0.0094718728246052 -0.208381202141314 0 -0.378874912984208 -0.407290531458023 -0.0568312369476311 -0.824052935740652 -1.56285901605986 -1.8185995823242 -1.70493710842893 -0.27468431191355 -0.161021838018288 0.483065514054865 1.35447781391854 1.41130905086617 1.15556848460183 0.975602900934335 0.833524808565257 -0.359931167334997
MMP1480 0.826170437985157 0.34406018012469 0.651277030046877 0.410851014119897 0.410431605451061 0.26709868939333 -4.56123868526564 -3.67020498225655 -0.926508204417411 0.313480219539726 0.334378900842374 -0.271682856934429 -0.411007398952085 -0.543365713868858 -0.459770988658264 0 0.89864329601388 1.2539208781589 0.905609523114763 0.341345127943257 0.0626960439079451 -0.0766284981097107 -0.188088131723835 -0.0487635897061795 -0.278649084035312 -0.856845933408583 -0.891677068912997 -0.975271794123591 -0.842913479206818 0.355277582145022 0.640892893281217 1.06583274643507 0.912575750215646 0.926508204417411 0.543365713868858 0.543365713868858 0.849879706307701 0.376176263447671
MMP1640 0.655388654337482 0.542534284999751 0.806825005177247 0.82838795843207 0.994447456873473 1.13497840745513 -2.61053082630515 -2.91117288067635 -0.91939620597247 -0.0850784548810346 0.161923510902614 0.00274446628648499 -0.205834971486374 -0.414414409259233 -0.0521448594432147 -0.200346038913404 0.238768566924194 0.211323904059344 -0.00274446628648499 -0.397947611540323 -0.683372105334762 -0.96330766655623 -0.798639689367131 -0.606527049313182 -0.551637723583482 -1.66589103589639 -1.38046654210195 -1.50122305870729 -1.61100171016669 0.524193060718632 0.793150756794161 1.27617682321552 0.793150756794161 0.90292940825356 0.688861037907732 1.0236859248589 1.46828946326947 0.562615588729422
[+] Show/hide bicluster #60 motif PSSM #1. bicluster 60 motif PSSM #1 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 0.666667 0.166667 0.166667
2 0 0 1 0
3 0.666667 0 0 0.333333
4 1 0 0 0
5 0 0 0 1
6 0 0 0 1
7 0.333333 0 0 0.666667
8 0.666667 0 0.166667 0.166667
9 0 1 0 0
10 0.333333 0 0.666667 0
11 0 0 1 0 [+] Show/hide bicluster #60 motif PSSM #2. bicluster 60 motif PSSM #2 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 1 0 0
2 0 0 0 1
3 0 1 0 0
4 0 0 1 0
5 0 1 0 0
6 1 0 0 0
7 0 1 0 0
8 0 1 0 0 |