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[+] Show/hide bicluster #59 rows and columns.
bicluster 59
Methanococcus maripaludis S2
16x40
[+] Show/hide bicluster #59 rows (genes).
bicluster 59 genes
Methanococcus maripaludis S2
16
[+] Show/hide bicluster #59 rows (short gene names).
bicluster 59 short names
Methanococcus maripaludis S2
16
short_name
[+] Show/hide bicluster #59 rows (long gene names).
bicluster 59 long names
Methanococcus maripaludis S2
16
long_name
[+] Show/hide bicluster #59 rows (NCBI RefSeq gene IDs).
bicluster 59 NCBI RefSeq IDs
Methanococcus maripaludis S2
32
[+] Show/hide bicluster #59 gene upstream sequences.
bicluster 59 upstream sequences
Methanococcus maripaludis S2
16
upstream
[+] Show/hide bicluster #59 columns (arrays; conditions).
bicluster 59 arrays
Methanococcus maripaludis S2
40
[+] Show/hide bicluster #59 ratios.
bicluster 59 ratios
Methanococcus maripaludis S2
16x40
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
MMP0413 -0.84687201052926 1.13251530149162 0.863167787283431 0.626279107055049 0.979613831304368 0.974406155818775 0.895988249692745 -2.71159861346804 -1.14860788126415 -0.971589503766348 -0.645714763372666 -0.420418646557281 -0.271562283661402 0.770432256609755 0.959520068936953 0.814686850984205 -1.08021441723091 -1.67966301375756 -1.94519058000426 -1.63138527443998 -1.73196389801827 -1.59920011489492 -1.30953367898943 -1.12044586666223 -0.416395501614149 -1.90495913057294 1.0922838520603 1.26527908461498 0.629622183600139 0.440534371272941 0.436511226329809 1.12044586666223 1.2813716643875 0.858941445358656 0.581344444282556 0.319840022978984 -0.235353979173215 -0.488812110590523 0.158914225253709 1.2934410992169
MMP0927 -0.202948406467118 0.760299254078309 0.809071712131744 0.541171903636376 0.868341582608188 1.04186552345091 1.04669829447607 -2.47110524343072 -0.536147282756417 -0.705775801594606 -0.136308631209259 -0.287762665886213 -0.227181052015431 0.348344279756994 0.536147282756417 0.293820827273291 -0.481623830272714 -0.948102257077732 -1.5660347185597 -0.935985934303576 -1.17225422839962 -1.06320732343222 -0.984451225400201 -0.845113513497404 -0.766357415465387 -1.25101032643164 0.960218579851889 0.869346159045716 0.596728896627199 1.15407974423839 1.08138180759345 0.948102257077732 0.572496251078886 0.457391184724401 0.378635086692385 0.269588181724978 -0.245355536176666 0.0272617262418518 0.578554412465964 0.56037992830473
MMP0928 -0.192234395800378 0.715364063060424 0.977841877712391 0.543734616658113 0.855369741222295 0.910581810628283 0.941128694388984 -2.22616569349098 -0.633428091079935 -0.803602802116336 -0.154417793347845 -0.375014640987623 -0.274170367780868 0.299381436082557 0.494767215420646 0.286775901931712 -0.683850227683313 -1.13134669003829 -1.40866844135687 -0.690152994758736 -1.04310795098238 -1.06201625220865 -0.935960910700203 -0.967474746077314 -0.721666830135847 -1.34564077060265 0.847722171644292 0.992685814379003 -0.00945415061313337 0.961171979001892 1.09983285466118 0.81620833626718 0.583005954476557 0.58930872155198 0.564097653250291 0.456950612968113 0.00945415061313337 0.154417793347845 0.583005954476557 0.683850227683313
MMP0929 -0.785698831467682 0.424332121524358 0.315586042976366 0.140215922968786 0.585563736153886 0.56051086108491 0.318140779684843 -3.52879406102253 -0.80212459101056 -1.08136250323949 -0.522886678781628 -0.424332121524358 -0.468134146972033 0.539312438324506 0.687144274210411 0.714520540115209 -0.851401869639195 -1.37155092183034 -1.59603630224968 -1.21824383276348 -1.38250142819226 -1.49200649181145 -1.42630345363994 -1.36060041546842 -0.873302882363033 -1.41535294727802 1.14706554141101 1.21276857958252 0.287450792000371 0.725471046477128 0.654292755124655 1.2018180732206 1.04851098415374 0.977332692801263 0.834976110096317 0.572163957410263 -0.0191633861333581 -0.139618956114466 0.375054842895723 1.16896655413484
MMP0931 0.00242606401640998 0.807879317464523 1.14378475623778 0.825950345355684 0.987642761816065 1.07966283137228 0.811270954959464 -3.29289733965842 -0.672019732545564 -0.414856946806106 -0.312962258116887 -0.337222898280987 -0.278997361887148 0.172250545165108 0.240180337624588 0.143137776968189 -0.492490995331226 -0.880661237956822 -1.10385912746654 -0.924330390252202 -1.37072616927164 -1.33190914500908 -1.13782402369628 -0.909774006153742 -0.948591030416302 -1.10385912746654 0.589533555987625 -0.201363313362028 0.0218345761476898 0.317814386149707 0.220771825493308 0.638054836315824 0.735097396972223 0.638054836315824 0.608942068118905 0.342075026313807 0.152842033033829 0.507047379429685 0.875809109924002 0.720541012873763
MMP0932 -0.150312596961221 0.995820954868092 1.11323602412393 0.751341486668435 1.04121533409828 1.21561097776648 1.21579951360424 -2.86722679742194 -1.13360750208254 -0.745299959932723 -0.620039462465038 -0.651354586831959 -0.613776437591654 0.244257970061985 0.494778964997354 0.269310069555522 -0.782878109173028 -1.50312596961221 -1.81627721328143 -1.59707134271298 -2.04174610872326 -1.99790493460957 -1.67849066606697 -1.55323016859929 -1.35281337265099 -1.86011838739512 0.663880636578728 0.244257970061985 0.457200815757048 0.695195760945649 0.569935263477965 0.764089034552875 0.60751341271827 0.419622666516743 0.156575621834606 0.0876823482273792 -0.194153771074911 0.106471422847532 0.72651088531257 0.713984835565802
MMP0933 -0.373583170469962 0.97781334183877 1.01675324110497 0.637323857854677 1.18466052192763 1.24959379893594 1.08491362049919 -2.20526721171356 -0.782900383332703 -0.79589458056644 -0.555501931742291 -0.549004833125422 -0.425559959404913 0.32810348015188 0.425559959404913 0.334600578768748 -0.854368468118261 -1.63402030214253 -2.05633171223901 -1.58204351320758 -2.21875917766073 -2.01085202192092 -1.54955802012323 -1.59503771044131 -1.0752698210918 -1.98486362745345 0.691941002696538 0.711432298547145 0.763409087482096 1.01029883492311 0.886853961202605 0.769906186098965 0.724426495780882 0.334600578768748 0.152681817496419 -0.211155705048239 -0.399571564937437 -0.133190521645812 0.477536748339864 0.698438101313407
MMP1666 -0.144001400122413 1.05157324963342 0.976116368337585 0.806619150034185 1.23314890362728 1.31132234592441 1.36348654575442 -4.06253727448063 -0.712746425815975 -0.785352173776856 -0.729687767006847 -0.654661827447271 -0.50945033152551 0.344877302814182 0.402961901182886 0.223867722879381 -0.628039719861615 -1.0612540160282 -1.40492122304303 -1.58643559294524 -1.70744517288004 -1.78489130403831 -1.70018459808395 -1.30085298429911 -0.10285814294458 -1.22582704473953 0.957185777284273 0.925723286501224 0.429584008768542 0.257750405261125 0.0762360353589243 0.947505010889489 0.574795504690303 0.50945033152551 0.347297494412878 0.235968680872861 -0.262590788458517 -0.219027339681989 0.918462711705136 0.577215696288999
MMP1667 -0.121105928354453 1.10937161952408 0.906792996968334 0.751854689846416 1.22582178112311 1.30941640393165 1.32822519166965 -3.79547653331259 -0.798586757244776 -0.844071335862855 -0.879980213719232 -0.70282974962777 -0.580739564916086 0.326558082255053 0.463011818109288 0.211649673114645 -0.659739096200117 -1.17922086252238 -1.4664918853734 -1.56703674337126 -1.71546010517762 -1.84951991584143 -1.82558066393717 -1.41143160599362 -0.106742377211902 -1.36594702737554 0.965736108098574 0.922645454670921 0.467799668490138 0.237982850209322 0.0704080868795602 0.937009005813472 0.513284247108217 0.455830042538013 0.302618830350802 0.2738917280657 -0.259953589399113 -0.236014337494862 0.941796856194322 0.527647798250768
MMP1668 -0.186796361665745 1.05934849401043 0.989450193100582 0.872119228642361 1.23690568698282 1.27928673252699 1.34114117090078 -3.63600888661442 -0.964069812892336 -0.853747129492433 -0.813629790074286 -0.788556452937945 -0.693277771819847 0.29210437763838 0.44254440045643 0.216884366229355 -0.650653098688066 -1.23736918767846 -1.56582990416454 -1.60343990986905 -1.79148993839161 -1.88927595322334 -1.79399727210524 -1.4680438893328 -0.236943035938429 -1.37527254192834 0.883835134056043 0.903893803765116 0.497705742156381 0.279567709070209 0.106561682829452 0.883835134056043 0.567911086138138 0.485169073588211 0.304641046206551 0.236943035938428 -0.284582376497478 -0.349773053051966 0.851239795778799 0.590477089560846
MMP1669 -0.251374911794961 1.06472410283834 0.947606036109339 0.889168707685116 1.27168559509975 1.32600259917787 1.33257927229949 -3.88117940021787 -0.851516062467748 -0.893631230936014 -0.877838042760414 -0.740963745238551 -0.651469012243486 0.288225684204694 0.422467783697291 0.267168099970561 -0.767285725531217 -1.28582873729674 -1.58589931263313 -1.57010612445753 -1.722773610155 -1.73593460030133 -1.6911872338038 -1.36479467817474 -0.15135138668283 -1.446392817082 0.877838042760414 0.880470240789681 0.580399665453287 0.359295030994892 0.140822594565763 0.867309250643348 0.504065922604556 0.475111744282623 0.335605248731493 0.203995347268162 -0.29875447632176 -0.401410199463158 0.767285725531217 0.543548893043555
MMP1670 -0.252375859784564 1.13359985638039 0.958070125715523 0.9162641509914 1.28366143271224 1.33260296537121 1.2790443069897 -3.69448147635279 -0.991376996170302 -0.893773072496714 -0.72924074401838 -0.765493629954284 -0.595383934408887 0.411330821195835 0.547976314338859 0.3722892517264 -0.765493629954284 -1.22841509652044 -1.53517028520886 -1.48218529807177 -1.70806866428779 -1.7443215502237 -1.62440815828186 -1.27024534952341 -0.110152999574478 -1.37900400733112 0.943969376100273 0.985799629103239 0.779437047621939 0.612116035610074 0.330458998723434 0.955124110234397 0.637214187411853 0.600961301475949 0.436428972997615 0.202179556181004 -0.341613732857558 -0.42248555532996 0.745972845219566 0.692987858082475
MMP1671 -0.339898818954639 1.03985994612394 0.847137819863888 0.844536470504484 1.20412965785852 1.22663132837712 1.10350079491247 -4.11294164622624 -0.769093090346513 -0.939042499823832 -0.852627545852314 -0.748929601086492 -0.630829163992083 0.377345299008963 0.535772714623413 0.368703803611811 -0.757571096483644 -1.17812387247837 -1.37111726968142 -1.42584674053005 -1.66204761471887 -1.7340600763618 -1.62460113466454 -1.27318032184704 -0.164188412545885 -1.29910480803849 0.944803496755267 0.924640007495246 0.795017576537968 0.737407607223623 0.406150283666136 0.924640007495246 0.639470659389235 0.561697200814869 0.383106295940398 0.155546917148733 -0.339898818954639 -0.45511875758333 0.671156142512125 0.682678136374995
MMP1672 -0.311220019030309 1.06367105863076 1.14198227649356 1.2093307236248 1.70146401739204 1.69167123907118 1.63356126512291 -2.85545749271876 -0.869769519330118 -0.875907425926819 -0.759287200589497 -0.743942434097744 -0.615046395567019 0.428397725872184 0.535811091314455 0.434535632468885 -0.832942079749911 -1.19814752225363 -1.49276703889529 -1.50197389879034 -1.65235261040952 -1.71373167637653 -1.61552517082931 -1.19200961565693 -0.15777235411278 -1.45593959931508 1.05446419873571 1.06674001192911 0.907154440414877 0.824292701359411 0.505121558330949 1.0114988525588 0.772120495287451 0.71381038261879 0.591052250684766 0.293363780744758 -0.277461532748453 -0.406357571279178 0.719948289215491 0.858051187641268
MMP1673 -0.289692934928416 1.29799823345151 0.953418413595034 1.02361624144915 1.6663062617658 1.66760501902781 1.57000341294541 -4.24784459593349 -0.56149875994998 -0.488154330975907 -0.367351742077434 -0.587385028999653 -0.552870003600089 0.409236329412749 0.586125834585513 0.379035682188131 -0.479525574626016 -0.738388265122744 -1.113739166343 -0.94116403934518 -1.35534434413994 -1.38554499136456 -1.27768553699093 -0.445010549226452 0.0684004535920578 -0.759960155997471 1.14268061915348 1.21602504812755 1.021878030255 0.599068969110349 0.361778169488349 1.15130937550337 0.901075441356532 0.961476735805768 0.590440212760459 0.22803244606504 -0.276749800403579 -0.289692934928416 0.586125834585513 0.97873424850555
MMP1719 -0.615967411650319 0.789767345228002 1.02167465403957 0.595044041476159 1.03783199042343 1.03752423163517 0.788239618253041 -3.69211275995398 -0.442167478072636 -0.365491036788364 -0.273479307247237 -0.45750276632949 -0.334820460274655 0.396161613302072 0.508620393852338 0.19169110321068 -0.682420327430021 -0.932896702291977 -1.11692016137423 -1.38273182449304 -1.72010816614384 -1.633208199355 -1.27538480669506 -0.559738021375186 -0.631302699907173 -1.08624958486052 1.49519060504331 1.31116714596105 0.518843919356908 0.396161613302072 0.71309090394373 1.4645200285296 0.769320294218863 0.692643852934591 0.426832189815781 -0.0230029323852816 -0.580185072384325 -0.375714562292933 0.462614529081775 0.85110849825542
[+] Show/hide bicluster #59 motif PSSM #1. bicluster 59 motif PSSM #1 Methanococcus maripaludis S2 14x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 1 0 0
4 0 0 0 1
5 1 0 0 0
6 0 1 0 0
7 1 0 0 0
8 0 0.6 0 0.4
9 1 0 0 0
10 1 0 0 0
11 1 0 0 0
12 0.4 0.4 0.2 0
13 1 0 0 0
14 0.4 0.6 0 0 [+] Show/hide bicluster #59 motif PSSM #2. bicluster 59 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0 0 1 0
2 1 0 0 0
3 0 0 1 0
4 0 1 0 0
5 0.5 0.5 0 0
6 0 0 1 0 |