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[+] Show/hide bicluster #36 rows and columns.
bicluster 36
Methanococcus maripaludis S2
13x41
[+] Show/hide bicluster #36 rows (genes).
bicluster 36 genes
Methanococcus maripaludis S2
13
[+] Show/hide bicluster #36 rows (short gene names).
bicluster 36 short names
Methanococcus maripaludis S2
13
short_name
[+] Show/hide bicluster #36 rows (long gene names).
bicluster 36 long names
Methanococcus maripaludis S2
13
long_name
[+] Show/hide bicluster #36 rows (NCBI RefSeq gene IDs).
bicluster 36 NCBI RefSeq IDs
Methanococcus maripaludis S2
26
[+] Show/hide bicluster #36 gene upstream sequences.
bicluster 36 upstream sequences
Methanococcus maripaludis S2
13
upstream
[+] Show/hide bicluster #36 columns (arrays; conditions).
bicluster 36 arrays
Methanococcus maripaludis S2
41
[+] Show/hide bicluster #36 ratios.
bicluster 36 ratios
Methanococcus maripaludis S2
13x41
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
MMP0107 -0.00796920326281168 -0.709259090390239 1.05082652171657 1.52030479757793 2.51029902778568 -0.486121399031512 -0.565813431659629 -0.517998212082759 0.071722829365305 -0.549875025134006 -0.788951123018356 -0.916458375223343 -0.820827936069603 -0.932396781748966 -0.868643155646473 0.342675740300902 -0.231106894621539 0.804889529543979 0.613628651236499 0.438306179454642 0.231106894621539 2.36685336905507 0.231106894621539 -0.613628651236499 0.358614146826525 0.677382277338992 1.33085694488955 2.03214683201698 1.28304172531268 1.58587144929952 0.0876612358909284 0.00796920326281163 -0.438306179454642 -0.677382277338992 -1.18741128615894 -1.0917808470052 -0.613628651236499 -0.438306179454642 -0.693320683864616 -0.948335188274589 -0.247045301147162
MMP0767 -0.14676866873739 -0.656596675930428 1.54587893159043 0.705262586445043 2.09338469620172 -0.347610004904344 -0.301262004250432 -0.100420668083477 0.208566002942607 -0.285812670699127 -0.579350008173907 -0.795640677892166 -0.51755267396869 -0.455755339763473 -0.841988678546078 -0.100420668083477 0.0695220009808689 1.12007668246955 0.51755267396869 0.579350008173907 0.857438012097382 2.52596603563823 0.486654006866082 -0.285812670699127 0.733843343686949 0.99648201405912 1.76894869162433 2.35602336657389 1.56810735545737 2.69590870470258 0.70294467658434 0.193116669391302 -0.363059338455648 -0.718394010135645 -0.764742010789557 -0.903786012751295 -0.471204673314778 -0.378508672006953 -0.981032680507816 -0.965583346956512 -0.0077246667756521
MMP0769 -0.077622471749702 -0.457110111414912 1.82368422357509 0.324321469738764 2.25105168074136 -0.0258741572499007 -0.215617977082505 0.0948719099163024 0.474359549581512 -0.112121348082903 -0.733101122080519 -0.646853931247516 -0.78484943658032 -0.819348312913521 -1.52657527774414 0.250116853415706 0.0948719099163024 0.940094380079724 0.577856178581115 0.508858425914713 0.836597751080121 2.61328988223997 0.146620224416104 -0.508858425914713 0.560606740414514 0.922844941913123 1.94056179374255 2.49254381507376 1.50932583957754 2.95827864557197 0.750350560247119 0.129370786249503 -0.319114606082108 -0.560606740414514 -0.819348312913521 -0.991842694579525 -0.664103369414117 -0.543357302247914 -1.14708763807893 -1.14708763807893 0.00862471908330023
MMP0790 -0.441094479495969 -0.73783025919621 0.470862702049443 0.479795339225759 2.32843946437295 -0.328052277705401 -0.568266956510358 -0.398703653824506 0.307810107366544 -0.384573378600685 -0.794351360091495 -0.8650027362106 -0.384573378600685 -0.441094479495969 -0.794351360091495 0.279549556918902 0.39259175870947 1.04258441900524 0.717588088857353 0.858890841095563 0.519764235723859 2.27191836347766 0.632806437514427 -0.229140351138654 0.802369740200279 1.02845414378142 2.10235506079181 2.20126698735856 1.45236240049605 2.73821744586376 0.39259175870947 0.194767905575976 -0.412833929048327 -0.667178883077106 -1.11934769023938 -1.2041293415823 -0.582397231734179 -0.45522475471979 -0.822611910539137 -0.879133011434421 0.0110743276663029
MMP0796 -0.216880081537339 -0.702691464180978 0.690248620143018 0.638279849705853 1.65696382294527 0.2689313011063 -0.477136179382145 -0.0607264228304548 0.407734553290197 -0.00867520326149356 -0.286281707629287 -0.685341057657991 -0.685341057657991 -0.858845122887862 -0.945597155502797 0.407734553290197 0.286281707629287 0.685341057657991 0.633289838089029 0.338332927198249 0.876195529410849 2.2815784577728 0.945597155502797 -0.130128048922403 0.720041870703965 0.910896342456823 2.52448414909462 1.96927114035904 1.63961341642228 2.8194410599854 0.737392277226952 0.0433760163074678 -0.425084959813184 -0.667990651135003 -0.858845122887862 -0.789443496795913 -0.494486585905132 -0.51183699242812 -1.11910122073267 -1.17115244030163 -0.0607264228304548
MMP0823 -0.0894999058200541 -0.390227534915952 0.871568553487527 0.245019252391294 2.44294328656646 0.11626110356135 -0.516849694535278 -0.501021924582862 -0.0736721358676384 -0.46936638467803 -0.785921783726344 -0.849232863536007 -0.548505234440109 -0.91254394334567 -1.05499387291741 0.464472042514495 -0.247777605344211 0.543610892276573 0.274538803085507 0.242883263180675 0.686060821848314 2.82280976542443 0.527783122324157 0.401160962704832 0.986788450944212 1.42996600961185 2.06307680770848 2.36380443680438 1.50910485937393 2.60122098609061 0.622749742038652 0.274538803085507 -0.358571995011121 -0.532677464487693 -0.643471854154603 -0.358571995011121 0.163744413418597 -0.0261888260103914 -0.991682793107748 -0.849232863536007 0.0371222537992713
MMP0834 -0.434052522407463 -0.722415651230185 0.661016047370858 0.601770977464843 2.19005194987931 -0.534979617495415 -0.621488556142232 -0.376379896642918 0.142673735237982 -0.462888835289735 -0.693579338347913 -0.909851684964954 -0.549397773936552 -0.679161181906777 -0.635906712583368 0.416618707619568 0.243600830325935 0.171510048120254 0.575218428472065 0.575218428472065 0.89241787017706 2.59376033023112 1.07985390391183 -0.160107550025877 0.676145523560018 0.993344965265012 2.31981535784953 2.43516060937862 1.90168882105659 3.05514133634748 0.834745244412515 0.0850011094734373 -0.434052522407463 -0.780088276994729 -1.06845140581745 -0.981942467170635 -0.477306991730871 -0.304289114437238 -0.92426984140609 -1.02519693649404 -0.102434924261332
MMP0974 -0.481105448919031 -0.747563851397263 0.651411863159166 0.544462565961804 2.07985586378843 0.125827578948054 0.510711938083279 -0.25905678018717 0.140630823530178 -0.451498959754783 -0.777170340561511 -0.762367095979387 -0.614334650158147 -0.288663269351419 -0.584728160993899 0.525515182665403 0.569924916411775 1.08803847678612 0.777170340561511 0.673547628486643 0.584728160993899 2.4351337337594 0.466302204336907 -0.466302204336907 0.451498959754783 0.747563851397263 1.62095528174258 2.22788830960967 1.70977474923533 2.28710128793816 0.318269758515667 -0.125827578948054 -0.688350873068767 -1.11764496595036 -1.44331634675709 -1.28048065635373 -0.717957362233015 -0.569924916411775 -1.19166118886098 -1.33969363468222 -0.25905678018717
MMP1078 -0.329638850588999 -0.708723528766347 0.747698526603221 -0.0468951645722048 2.58766497712364 -0.362602735647899 -0.329638850588999 0.181301367823949 0.329638850588999 -0.0824097126472497 -0.395566620706799 -0.494458275883498 -0.461494390824598 -0.543904103471848 -1.318555402356 0.741687413825247 0.527422160942398 0.708723528766347 1.1207720920026 0.807615183943047 0.494458275883498 2.34043583918189 0.461494390824598 -0.214265252882849 0.988916551766997 1.1537359770615 2.09320670124014 2.50525526447639 1.94486921847509 2.14265252882849 0.510940218412948 0.1318555402356 -0.461494390824598 -0.791133241413597 -1.3844831724738 -1.2855915172971 -0.774651298884147 -0.758169356354697 -1.1537359770615 -1.3515192874149 0
MMP1526 -0.167464107126734 -0.358851658128715 1.29325461353759 0.490748047593839 2.65550227015249 -0.390749583295711 -0.151515144543235 -0.135566181959737 0.0717703316257429 -0.231259957460727 -0.964912236301655 -0.91706534855116 -0.5023923213802 -0.215310994877229 -0.853269498217166 0.183413069710232 0.837320535633667 0.757575722716175 0.741626760132677 1.14035082472014 0.326953732961718 1.93779895389506 0.279106845211222 0.0717703316257429 0.837320535633667 1.09250393696964 2.511961606901 2.25677820556503 1.87400310356106 2.28867613073202 0.374800620712213 0.119617219376238 -0.342902695545216 -0.677830909798683 -0.661881947215185 -0.773524685299674 -0.5023923213802 -0.693779872382182 -1.07655497438614 -1.36363630088912 -0.0717703316257429
MMP1535 -0.173082873979387 -0.394244324064159 0.717482139488346 0.330761083703151 1.75006017023602 0.0384628608843082 -0.326934317516619 -0.153851443537233 0.346165747958774 -0.240392880526926 -0.884645800339088 -0.403860039285236 -0.317318602295542 -0.509632906717083 -0.855798654675857 0.365397178400928 0.0961571522107704 0.94234009166555 0.451938615390621 0.490401476274929 0.413475754506313 1.74044445501494 0.500017191496006 0 0.634637204591085 0.826951509012625 1.53851443537233 1.80775446156248 1.03849724387632 2.06737877253156 0.365397178400928 0.182698589200464 -0.250008595748003 -0.480785761053852 -0.711562926359701 -0.730794356801855 -0.346165747958773 -0.25962431096908 -0.68271578069647 -0.730794356801855 0
MMP1536 -0.534059351176398 -0.750569898950614 0.690616064204712 0.67106321314577 2.36718198899809 -0.461889168584993 -0.375284949475307 -0.447455132066712 0.649531643322647 -0.41858705903015 -0.649531643322647 -0.851608154578581 -0.346416876438745 -0.389718985993588 -0.663965679840928 0.404153022511869 0.288680730365621 0.519625314658117 0.649531643322647 0.519625314658117 0.505191278139836 2.16510547774216 0.41858705903015 -0.288680730365621 0.721701825914052 0.822740081542019 1.94859492996794 2.30944584292497 1.70321630915716 2.17953951426044 0.41858705903015 -0.0433021095548431 -0.187642474737653 -0.404153022511869 -0.606229533767803 -0.56292742421296 -0.202076511255934 -0.101038255627967 -0.938212373688267 -1.18359099449904 -0.173208438219372
MMP1655 -0.446389841544565 -0.46206062162874 0.646001245137785 -0.0922679155391013 2.1079473121759 -0.493402181797089 -0.321023600871168 -0.0232787792718504 0.321478382579991 -0.132974239861073 -0.493402181797089 -0.524743741965438 -0.556085302133787 -0.775476223312232 -0.885171683901454 0.650564764347658 0.211782921990769 0.227453702074944 0.760260224936881 0.58788164401096 0.35281994274834 2.23331355284929 0.164770581738245 -0.822488563564756 0.478186183421737 0.775931005021055 1.63782390965066 2.24898433293347 1.55947000922979 2.29599667318599 0.18044136182242 -0.117303459776898 -0.477731401712914 -1.01053792457485 -0.994867144490677 -1.13590416524825 -0.681451542807184 -0.540414522049613 -0.806817783480581 -0.994867144490677 -0.289682040702819
[+] Show/hide bicluster #36 motif PSSM #1. bicluster 36 motif PSSM #1 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0 0.25 0 0.75
2 0.125 0 0.875 0
3 1 0 0 0
4 0 0 1 0
5 0 0.25 0.75 0
6 0 0 0.625 0.375
7 0 0.125 0.875 0 [+] Show/hide bicluster #36 motif PSSM #2. bicluster 36 motif PSSM #2 Methanococcus maripaludis S2 14x4
POSITION A C G T
1 0 0.833333 0.166667 0
2 0.333333 0.166667 0.333333 0.166667
3 0 0 0 1
4 0 0 0.5 0.5
5 0 0.833333 0 0.166667
6 0.833333 0 0.166667 0
7 0.666667 0 0.166667 0.166667
8 1 0 0 0
9 0.333333 0 0.166667 0.5
10 0 1 0 0
11 0.333333 0.5 0 0.166667
12 0.166667 0.666667 0.166667 0
13 0 0 1 0
14 0 0 0.5 0.5 |