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[+] Show/hide bicluster #33 rows and columns.
bicluster 33
Methanococcus maripaludis S2
17x38
[+] Show/hide bicluster #33 rows (genes).
bicluster 33 genes
Methanococcus maripaludis S2
17
[+] Show/hide bicluster #33 rows (short gene names).
bicluster 33 short names
Methanococcus maripaludis S2
17
short_name
[+] Show/hide bicluster #33 rows (long gene names).
bicluster 33 long names
Methanococcus maripaludis S2
17
long_name
[+] Show/hide bicluster #33 rows (NCBI RefSeq gene IDs).
bicluster 33 NCBI RefSeq IDs
Methanococcus maripaludis S2
30
[+] Show/hide bicluster #33 gene upstream sequences.
bicluster 33 upstream sequences
Methanococcus maripaludis S2
17
upstream
[+] Show/hide bicluster #33 columns (arrays; conditions).
bicluster 33 arrays
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #33 ratios.
bicluster 33 ratios
Methanococcus maripaludis S2
17x38
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0300m
MMP0304 -0.566174894240986 -1.89926223630849 -0.108536576488338 -0.39079179242037 -0.764368256778109 -1.05007824896176 0.543221857987973 -0.00765101208433764 -0.0229530362530129 0.328993519626519 0.589127930493999 0.811007280939791 0.589127930493999 0.489664773397609 0.374899592132545 0.382550604216882 -0.321342507542181 -0.619731978831349 -0.436107688807246 -0.206577326277117 0.145369229602415 -0.0688591087590388 0.673289063421713 0.420805664638571 1.16295383681932 1.2394639576627 1.06349067972293 1.74443075522898 1.64496759813259 -0.0382550604216882 -0.13006720543374 -0.374899592132545 -0.856913353445817 -0.956376510542206 -0.550872870072311 -0.795705256771115 -0.612080966747012 -0.543221857987973
MMP0305 -0.486320336345523 -1.84818359391275 -0.102854046160059 -0.691300720784361 -1.02402907215241 -1.02125705774578 -0.181291012957207 -0.164025202199378 -0.123738310431109 0.244598985735914 0.630202092660766 0.618691552155547 0.54387303887162 0.394236012303767 0.152514661694158 0.434522904072035 -0.233088445230694 -0.457543985082474 -0.578404660387279 0.146759391441548 0.11222776992589 0.0604303376524022 0.561138849629449 0.492075606598133 1.0042946590804 0.964007767312131 1.02156046983823 1.51651371156267 1.49349263055223 0.0316539863893536 -0.158269931946768 -0.693510065439473 -0.952497226806912 -1.02731574009084 -0.779839119228619 -1.02731574009084 -0.831636551502107 -0.515096687608572
MMP0306 -0.597300438933814 -1.83730402047208 -0.200668547353424 -0.803463944918944 -1.1252422968443 -1.06812765589641 0.0675679229563139 -0.208109202705447 -0.12702769515787 0.240541805724477 0.456759159184682 0.521624365222743 0.554056968241774 0.61351674044333 0.305407011762539 0.694598247990907 0.364866783964095 -0.429731990002156 -0.240541805724477 -0.229730938051467 0.327028747108559 -0.132433128994375 0.435137423838661 0.35946135012759 0.327028747108559 0.386488519310115 0.743247152519453 1.46757528661114 1.40811551440958 -0.0675679229563139 -0.213514636541952 -0.808112358557514 -1.13243838874782 -1.27838510233346 -1.07297861654626 -1.24054706547792 -1.04595144736374 -0.705409115663917
MMP0307 -0.675379977421493 -1.13519003106484 -0.360370012230604 -0.44968603325711 -0.796994969918011 -0.47394298052618 0.684695563316962 0.0419201365296099 -0.395912400557427 -0.200285096752581 0.0139733788432033 0.144391581379767 0.302756541602738 0.0139733788432033 -0.0326045506341411 0.0978136519024231 0.954847554285559 -0.498383845407584 -0.00465779294773444 0.00465779294773444 0.153707167275236 -0.153707167275236 0.973478726076497 0.703326735107899 0.461121501825709 0.302756541602738 0.433174744139302 1.3926800913726 1.30883981831338 -0.163022753170705 -0.153707167275236 -0.433174744139302 -0.86169169533087 -0.86169169533087 -0.45180591593024 -0.7033267351079 -0.582224118466804 -0.805798179958057
MMP0311 -0.280248794131846 -1.23442257989181 -0.186554929745054 -0.533199925191555 -0.681150474791684 -0.940913868442243 -0.63160549125237 0.00418281782286338 -0.204958073320305 -0.0794735386344041 0.0376453604057704 -0.0209140891143169 0.188226802028852 0.154764259445945 -0.238420615903213 0.313711336714753 0.455927142692108 0.0711079029886774 0.121301716863038 0.0711079029886774 -0.00418281782286338 0.138032988154491 1.1084467230588 0.8909401962699 0.648336762543824 0.982962188372894 1.38451269936778 1.55182541228231 1.56855668357377 0.288614429777573 -0.34717387929766 -0.405733328817748 -0.32207697236048 -0.263517522840393 -0.573046041732283 -0.497755320920742 -0.547949134795103 0.0711079029886774
MMP0599 -0.264060317530161 -0.467582355989623 -0.167469823519827 -0.867132480813362 -1.03091203648435 -0.337248630314299 0.124556753551963 0.0249113507103926 -0.0747340521311776 0.0946631326994917 0.254095777246004 0.224202156393533 0.144485834120277 0.244131236961847 -0.373670260655888 0.144485834120277 0.0846985924153347 -0.403563881508359 -0.43345750236083 -0.23416669667769 0.13452129383612 -0.0548049715628636 0.911755436000367 1.12101078196766 1.19076256395676 0.931684516568681 1.18079802367261 1.65909595731214 1.79859952129034 -0.0249113507103925 -0.383634800940045 -0.792180952590483 -1.08115262083104 -1.25054980566171 -1.04129445969441 -1.29040796679833 -1.07118808054688 -0.961578137421152
MMP0600 -0.304347302988608 -1.96746962383718 -0.751163290456324 -1.17563121307401 -1.46046400069024 -1.74799622931897 0.19021706436788 0 -0.0271738663382686 0.184782291100226 0.391303675271067 0.347825489129837 0.364129808932799 0.342390715862184 0.0326086396059223 0.565216419835986 0.461955727750565 -0.152173651494304 -0.233695250509109 -0.0597825059441908 0.135869331691343 -0.288042983185647 0.505433913891795 0.951085321839399 0.989128734712975 0.744563937668558 0.896737589162862 1.18478057234851 1.16304147927789 -0.233695250509109 -0.228260477241456 -0.543477326765371 -0.793476897077442 -1.04347646738951 -0.961954868374706 -1.00543305451594 -0.836955083218671 -0.679346658456714
MMP0691 -0.725405633776988 -1.09175899892068 -0.239004720861727 -0.65757158687014 -0.696144771994582 -0.988950308326091 0.0264746581670434 0.683046180709719 -0.333580692904746 -0.174732743902486 -0.0688341112343127 0.142963154102034 0.121783427568399 0.0794239745011301 -0.153553017368851 0.503018505173824 0.195912470436121 0.0476543847006781 0.142963154102034 0.0794239745011301 0.428889462306102 -0.0264746581670434 1.11723057464923 0.195912470436121 -0.23827192350339 -0.291221239837477 0.100603701034765 1.47728592572102 1.62554401145646 0.153553017368851 -0.0264746581670434 -0.428889462306102 -0.841894129711979 -0.841894129711979 -0.428889462306102 -0.630096864375632 -0.450069188839737 -0.735995497043805
MMP0693 0.180943630698393 -1.72271950494399 -0.10293392663947 -0.858114092252022 -1.82125087271812 -1.83126935966262 -0.0258490900997705 -0.0516981801995409 -0.109858632924025 0.168019085648508 0.329575898772073 0.510519529470467 0.478208166845754 0.452359076745983 0.200330448273221 -0.0258490900997705 -0.439434531696098 -0.0516981801995409 -0.084009542824254 -0.0129245450498852 0.529906347045295 0.0258490900997705 1.00811451389105 0.723774522793573 0.775472702993114 0.678538615118975 1.2730676874137 2.16486129585578 2.10023857060635 0.0129245450498852 0.400660896546442 -0.626840434919434 -0.710849977743688 -0.84009542824254 -0.626840434919434 -0.859482245817368 -0.704387705218745 -0.878869063392196
MMP0903 -0.466765795505879 -0.857508201188928 -0.326586657224309 -0.461997150177819 -1.12198019725518 -1.39384200865074 -0.314634721415074 0.176333744968888 0.224739086725053 0.342294916704311 0.376870160815858 0.439105600216642 0.522086186084353 0.473680844328188 0.5566614301959 0.0242026708780824 0.197078891435816 -0.508256088439735 -0.390700258460477 -0.217824037902744 0.134843452035032 -0.273144428481218 0.96464931071215 1.18593087302605 0.992309506001387 0.784858041332107 0.86092357837751 1.7460498276331 1.46944787474073 -0.190163842613506 0.0449478173450104 -0.35612501434893 -0.480595893150498 -0.5566614301959 -0.826348334265963 -0.764112894865179 -0.722622601931324 -0.577406576662828
MMP1059 -0.414957619064813 -1.62460909811833 -0.418961901506536 -1.1681561272228 -1.05808424462437 -1.37860064374052 0.346611658277667 0.0732278151290847 -0.0244092717096949 0.258738280122766 0.268501988806644 0.385666493013179 0.366139075645423 0.219683445387254 0.219683445387254 0.0927552324968406 -0.375902784329301 -0.0439366890774508 -0.0829915238129626 0.180628610651742 0.434485036432569 -0.0244092717096949 1.00078014009749 0.229447154071132 0.0537003977613288 0.219683445387254 0.541885831955226 1.55731153507853 1.48896557429139 -0.0439366890774508 -0.14157377591623 -0.532122123271348 -0.864088218523199 -0.815269675103809 -0.414957619064813 -0.659050336161762 -0.580940666690738 -0.893379344574833
MMP1060 -0.596068561724193 -1.67682058011253 -0.250217582238134 -1.11130608674967 -1.52025904574717 -1.24992417575166 -0.0720522437249024 -0.203056323224725 -0.0327510198749556 0.22925713912469 0.569867745824228 0.582968153774211 0.451964074274388 0.34716081067453 0.34716081067453 0.294759178874601 0.858076720723838 -0.22925713912469 -0.0720522437249024 0.124453875524832 0.399562442474459 -0.412662850424441 0.386462034524477 0.661570601474104 1.06768324792355 1.12008487972348 0.740173049173998 1.26418936717329 1.23798855127332 -0.386462034524477 -0.189955915274743 -0.22925713912469 -0.661570601474104 -0.412662850424441 -0.0720522437249024 -0.137554283474814 -0.203056323224725 -0.517466114024299
MMP1234 -0.17256542962675 -1.28158870337726 -0.638858053831913 -0.881593952360984 -1.6258581003183 -2.014046630589 -0.094126597978227 -0.0549071821539657 -0.274535910769829 -0.180409312791602 -0.0549071821539657 0.109814364307932 0.251004261275272 0.274535910769829 0.117658247472784 0.48632075622084 0.407881924572318 -0.00784388316485227 0.0941265979782272 0.133346013802489 0.17256542962675 -0.251004261275272 0.823607732309487 0.909890447122862 0.964797629276828 0.894202680793158 0.83145161547434 1.08245587674961 1.09814364307932 -0.219628728615863 -0.188253195956454 -0.886358797628305 -0.862827148133749 -0.878514914463453 -0.517696288880249 -0.65888618584759 -0.603979003693624 -0.400038041407465
MMP1387 -0.216794539874852 -1.28322913909201 -0.156740388766675 -0.949548690894365 -1.18485322887801 -1.60301127475079 0.401471370138614 -0.056205991819406 -0.264971104291485 -0.144529693249901 0.10438255623604 0.256941676888713 0.17664740286099 0.0963531288332674 -0.17664740286099 0.859148732096634 0.546001063388515 -0.0401471370138614 -0.10438255623604 0.152559120652673 0.473736216763565 -0.0481765644166337 0.706589611443961 0.883237014304951 0.578118772999604 0.337235950916436 0.714619038846733 1.17229640080475 1.27667895704079 -0.0401471370138614 -0.208765112472079 -0.658413047027327 -0.931413578721585 -1.02776670755485 -0.730677893652278 -0.883237014304951 -0.674471901832872 -0.778854458068911
MMP1683 0 -1.14284575118678 -0.0965807914729709 -0.634092567450582 -1.20230299564089 -1.55162859046475 -0.219879781797012 -0.0227461843238288 -0.0454923686476577 0.159223290266802 0.257790089003393 0.235043904679565 0.333610703416156 0.181969474590631 0.083402675854039 -0.242625966120841 0.280536273327222 -0.689967591156141 -0.356356887739985 -0.159223290266802 0.272954211885946 0.0303282457651051 1.44817373528377 1.1828015848391 0.697549652597417 0.204715658914459 0.606564915302102 1.92584360608417 1.94100772896673 -0.00758206144127628 -0.083402675854039 -0.492833993682958 -0.826444697099114 -0.985667987365916 -0.629311099625931 -0.788534389892733 -0.780952328451456 -0.849190881422943
Unanno_13 -0.631125051161538 -0.665100845618088 -0.610987653291766 -1.12624577749841 -1.03613104629159 -0.988818970480606 0.640948009156271 -0.213649336385424 -0.194003420395959 -0.0957738404486382 0.00736721849604903 0.125242714432834 -0.0319246134828794 -0.125242714432835 -0.262764126359084 0.24311821036962 0.29223300034328 0.110508277440736 -0.00736721849604909 0.0417475714776115 0.857053085040377 0.351170748311673 1.01422041295609 0.444488849261628 0.336436311319575 0.680239841135199 1.08298111891922 1.85899480050305 1.89828663248198 0.341347790316941 -0.130154193430201 -0.385551101293236 -0.690062799129931 -0.783380900079886 -0.390462580290602 -0.503426597230021 -0.272587084353816 -0.626213572164173
Unanno_39 0.0802209019666812 -1.1604747825296 -0.611532202667066 -0.835608561541061 -1.21195006114012 -1.12653922992133 0.434881731714114 -0.0717765964965042 -0.0379993746157963 -0.164663956668451 0.0211107636754424 0.206885484019336 0.0633322910263273 0.0295550691456194 -0.164663956668451 1.04287172556686 0.468658953594822 -0.637545062998361 -0.426437426243937 -0.358882982482521 0.130886734787743 -0.0633322910263273 1.0259831146265 0.882429921633493 0.477103259064999 0.105553818377212 0.249107011370221 1.43975408266517 1.61708449753889 -0.00422215273508849 -0.291328538721105 -0.78109825599137 -1.33842241702305 -1.39753255531429 -0.78109825599137 -0.789542561461547 -0.527769091886061 -0.797986866931724
[+] Show/hide bicluster #33 motif PSSM #1. bicluster 33 motif PSSM #1 Methanococcus maripaludis S2 19x4
POSITION A C G T
1 0 0 0.142857 0.857143
2 0.285714 0.142857 0.571429 0
3 0 0 0.142857 0.857143
4 0.428571 0.142857 0.285714 0.142857
5 0.428571 0.142857 0 0.428571
6 0.857143 0.142857 0 0
7 0.285714 0 0 0.714286
8 0.285714 0 0 0.714286
9 0.428571 0 0 0.571429
10 0.142857 0.142857 0.714286 0
11 0 0 1 0
12 0 0 0.571429 0.428571
13 0.142857 0 0.857143 0
14 0.142857 0 0.857143 0
15 0.285714 0 0 0.714286
16 0 0 1 0
17 0.571429 0 0.428571 0
18 0 0 0.571429 0.428571
19 1 0 0 0 [+] Show/hide bicluster #33 motif PSSM #2. bicluster 33 motif PSSM #2 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 1 0 0
2 0 0.333333 0.666667 0
3 0 0.333333 0.666667 0
4 1 0 0 0
5 1 0 0 0
6 0 0 0 1
7 0 1 0 0
8 0 0 0 1
9 1 0 0 0
10 0 0 1 0
11 0 1 0 0 |