|
[+] Show/hide bicluster #32 rows and columns.
bicluster 32
Methanococcus maripaludis S2
6x39
[+] Show/hide bicluster #32 rows (genes).
bicluster 32 genes
Methanococcus maripaludis S2
6
[+] Show/hide bicluster #32 rows (short gene names).
bicluster 32 short names
Methanococcus maripaludis S2
6
short_name
[+] Show/hide bicluster #32 rows (long gene names).
bicluster 32 long names
Methanococcus maripaludis S2
6
long_name
[+] Show/hide bicluster #32 rows (NCBI RefSeq gene IDs).
bicluster 32 NCBI RefSeq IDs
Methanococcus maripaludis S2
0
[+] Show/hide bicluster #32 gene upstream sequences.
bicluster 32 upstream sequences
Methanococcus maripaludis S2
6
upstream
[+] Show/hide bicluster #32 columns (arrays; conditions).
bicluster 32 arrays
Methanococcus maripaludis S2
39
[+] Show/hide bicluster #32 ratios.
bicluster 32 ratios
Methanococcus maripaludis S2
6x39
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0300m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0180m
RNA_38 -0.134904429610683 0.337261074026708 -1.01003448048716 -0.973023750692426 -1.01751046699886 -1.00449671497184 -0.970254867934765 -0.947919213689627 -1.01012677964509 0.263676839693609 -1.16508371027408 -2.02969846368801 0.355657132609983 0.134904429610683 0.62546599183135 0.0613201952775834 0.171696546777233 -0.613201952775834 0.741974362858759 -0.797162538608584 0.0306600976387917 -1.53300488193958 -0.459901464581875 -1.05470735877443 -1.52074084288407 0.2207527029993 -0.343393093554467 -0.3679211716655 0.686786187108934 1.91932211218836 1.77828566304992 -0.0306600976387917 -0.533485698914975 -0.398581269304292 0.312732995915675 1.73536152635561 0.558013777026009 -0.11037635149965 1.55753296005062
RNA_39 -0.134938768559139 0.386415564510262 -0.87101536166965 -0.820793507306808 -0.998970300659046 -0.956872569796076 -0.968043242675189 -0.956687930625624 -0.947363655584607 0.368014823343107 -1.15311311314173 -1.93821140294036 0.355747662565003 0.17174025089345 0.650159521239488 0.085870125446725 0.226942474394916 -0.466152109567935 0.778964709409576 -0.65629310162854 0.0122671607781036 -1.48432645415053 -0.386415564510262 -0.993640023026388 -1.44752497181622 0.233076054783968 -0.325079760619744 -0.318946180230692 0.717628905519058 1.96887930488562 1.97501288527467 -0.0122671607781036 -0.545888654625608 -0.337346921397848 0.368014823343107 1.91367708138415 0.693094583962851 -0.0184007411671553 1.57633015998631
RNA_40 -0.119374236547013 0.37006013329574 -1.03262501760821 -1.00315813193745 -1.00513456939098 -0.973242058920709 -1.01843060316924 -0.941619059664291 -0.958778127299184 0.179061354820519 -1.16986751816073 -2.04129944495392 0.274560744058129 0.113405524719662 0.626714741871817 0.0596871182735064 0.173092642993169 -0.596871182735064 0.668495724663272 -0.805776096692336 0.0119374236547013 -1.49814666866501 -0.417809827914545 -0.984837451512855 -1.55783378693852 0.155186507511117 -0.417809827914545 -0.364091421468389 0.626714741871817 1.85626937830605 1.76076998906844 0 -0.519277928979506 -0.393934980605142 0.304404303194882 1.68914544714023 0.584933759080363 -0.119374236547013 1.50411538049236
RNA_41 -0.184752883732894 0.387981055839076 -0.93678865942123 -0.937622898750867 -1.03263383667976 -0.953010036514132 -0.979798484119155 -0.989067844217507 -0.974978416868012 0.320238331803682 -1.12699259077065 -2.0199648621463 0.264812466683814 0.110851730239736 0.603526086860785 0.0862180124086835 0.160119165901841 -0.603526086860785 0.708219387642759 -0.788278970593679 0.0554258651198681 -1.52729050552525 -0.400297914754603 -1.00998243107315 -1.48418149932091 0.209386601563946 -0.387981055839076 -0.363347338008024 0.665110381438417 1.9029547024488 1.9029547024488 -0.0431090062043419 -0.566575510114207 -0.369505767465787 0.307921472888156 1.81057826058236 0.615842945776312 -0.0739011534931575 1.52729050552525
RNA_42 -0.106119213286743 0.337084559852008 -1.0023624875131 -1.01871084521596 -1.06822569559716 -1.01908666953097 -1.05619931751689 -0.987047643555358 -0.961961373649705 0.249692266557043 -1.20476518613773 -2.04747658576775 0.305873026532377 0.0998769066228171 0.642957586384385 0.0561807599753347 0.1435730532703 -0.605503746400829 0.749076799671129 -0.848953706293946 0.0686653733031869 -1.58554589263722 -0.461930693130529 -1.02373829288388 -1.58554589263722 0.218480733237413 -0.411992239819121 -0.34956917317986 0.655442199712238 1.82899585253034 1.7228766392436 -0.0561807599753347 -0.549322986425494 -0.405749933155195 0.31835763986023 1.67918049259611 0.486899919786234 -0.162299973262078 1.53560743932581
RNA_44 -0.173433405496668 0.340672760797026 -0.946839156420757 -0.891460686982083 -1.01499009803698 -1.00305669048117 -0.991496201911484 -0.906470679270399 -0.879713738919335 0.334478710600716 -1.13970523612096 -1.77769240634084 0.340672760797026 0.167239355300358 0.644181220416194 0.0185821505889287 0.272538208637621 -0.576046668256789 0.792838425127624 -0.867167027483339 -0.0247762007852383 -1.51754229809584 -0.334478710600716 -1.02821233258739 -1.46179584632906 0.222985807067144 -0.328284660404407 -0.334478710600716 0.70612172237929 1.93254366124858 1.85821505889287 -0.111492903533572 -0.637987170219885 -0.464553764723217 0.260150108245002 1.80866265732239 0.70612172237929 -0.0185821505889287 1.60425900084418
[+] Show/hide bicluster #32 motif PSSM #1. bicluster 32 motif PSSM #1 Methanococcus maripaludis S2 23x4
POSITION A C G T
1 0 1 0 0
2 0 1 0 0
3 0 0 1 0
4 0.666667 0 0.333333 0
5 0 0 0.666667 0.333333
6 0 0 0 1
7 0.666667 0 0.333333 0
8 0.333333 0 0 0.666667
9 0 0 0 1
10 0.666667 0.333333 0 0
11 0 0.333333 0 0.666667
12 0 0.333333 0.666667 0
13 0 0 1 0
14 0.666667 0.333333 0 0
15 0 1 0 0
16 0 0.666667 0.333333 0
17 0 0 1 0
18 1 0 0 0
19 0 0 1 0
20 0 0 1 0
21 0.666667 0.333333 0 0
22 0 1 0 0
23 0.333333 0.666667 0 0 [+] Show/hide bicluster #32 motif PSSM #2. bicluster 32 motif PSSM #2 Methanococcus maripaludis S2 20x4
POSITION A C G T
1 1 0 0 0
2 0 0 1 0
3 0 0 1 0
4 0 0 0 1
5 0 0.666667 0.333333 0
6 0 0.333333 0.666667 0
7 0 0 0.333333 0.666667
8 0.333333 0 0.666667 0
9 0 0.666667 0 0.333333
10 0.666667 0 0.333333 0
11 0 0 0 1
12 1 0 0 0
13 1 0 0 0
14 0 0 1 0
15 0 1 0 0
16 0 1 0 0
17 0 0 0 1
18 0.333333 0.666667 0 0
19 0 1 0 0
20 0.333333 0 0.666667 0 |