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[+] Show/hide bicluster #26 rows and columns.
bicluster 26
Methanococcus maripaludis S2
14x40
[+] Show/hide bicluster #26 rows (genes).
bicluster 26 genes
Methanococcus maripaludis S2
14
[+] Show/hide bicluster #26 rows (short gene names).
bicluster 26 short names
Methanococcus maripaludis S2
14
short_name
[+] Show/hide bicluster #26 rows (long gene names).
bicluster 26 long names
Methanococcus maripaludis S2
14
long_name
[+] Show/hide bicluster #26 rows (NCBI RefSeq gene IDs).
bicluster 26 NCBI RefSeq IDs
Methanococcus maripaludis S2
28
[+] Show/hide bicluster #26 gene upstream sequences.
bicluster 26 upstream sequences
Methanococcus maripaludis S2
14
upstream
[+] Show/hide bicluster #26 columns (arrays; conditions).
bicluster 26 arrays
Methanococcus maripaludis S2
40
[+] Show/hide bicluster #26 ratios.
bicluster 26 ratios
Methanococcus maripaludis S2
14x40
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0912m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0180m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m ts_LowH2_to_HighH2_minus30m
MMP0198 -0.270116258835087 -0.324139510602104 -0.119687028650403 0.668643437108922 1.2425347906414 -0.108046503534035 0.0945406905922804 -0.283622071776841 0.0270116258835087 0.270116258835087 -0.0135058129417544 -0.607761582378946 0.175575568242806 -0.985924344748067 -0.540232517670174 -0.607761582378946 -0.540232517670174 0.229598820009824 0.0540232517670174 0.688796460029471 0.513220891786665 0.162069755301052 0.702302272971226 0.648279021204209 1.76926149536982 0.351151136485613 0.364656949427367 0.918395280039295 2.7821974660014 2.20144750950596 2.74168002717613 2.56610445893333 0.486209265903156 -0.418680201194385 -1.13448828710736 -1.06695922239859 -0.661784834145963 -0.837360402388769 -0.864372028272278 0
MMP0201 -0.44406958384093 -0.35699711642114 -1.04411796466973 1.18778483666589 1.4541102059105 0.200266675065517 -0.374411609905098 -0.478898570808846 -0.217681168549476 0.53114205126072 -0.235095662033434 -0.217681168549476 0.409240596873014 -0.774944960036133 -0.879431920939881 -0.670457999132385 -0.949089894875713 0.461484077324888 0.322168129453224 1.41928121894258 0.426655090356972 0.757530466552175 0.740115973068217 0.827188440488007 2.60346677585173 0.757530466552175 0.513727557776762 0.931675401391755 2.29000589314048 2.60346677585173 2.01137399739715 2.35966386707631 0.61821451868051 -0.409240596873014 -0.705286986100301 -0.287339142485308 -0.426655090356972 -0.966504388359671 -0.879431920939881 0.200266675065517
MMP0208 0.235847784476185 -0.140989724852864 -0.316464893734455 0.864395560449113 1.71421032107476 0.105404031246899 -0.169977225570483 -0.329408479517388 -0.112002224135245 0.482241540575948 -0.387383480952627 -0.068520973058816 0.975029052775473 -0.894664743510961 -0.60478973633477 -0.517827234181913 -0.329408479517388 0.554710292369995 0.337304036987852 0.960535302416664 0.902560300981425 1.14895405708119 1.09097905564595 0.888066550622616 2.67079784475619 0.801104048469758 0.598191543446424 1.30838531102809 2.27946658506833 2.80124159798548 2.46788533973286 2.55484784188572 0.873572800263806 -0.169977225570483 -0.735233489564056 -0.575802235617151 -0.314914729158579 -0.778714740640485 -0.836689742075723 0.163379032682137
MMP0475 -0.10958632562866 -0.493138465328972 -0.0686286418993091 0.92041595990384 2.0410453148338 0.328758976885981 0.0136982907035826 -0.301362395478816 -0.0136982907035825 0.410948721107476 -0.287664104775234 -0.0410948721107476 1.10956154699019 -0.75340598869704 -0.726009407289875 -0.739707697993458 -0.780802570104205 -0.191776069850156 0.397250430403894 0.397250430403894 0.69861282588271 0.876690605029283 0.80819915151137 0.876690605029283 2.5889769429771 1.27394103543318 0.616423081661215 1.01367351206511 2.34240771031262 2.54788207086635 2.08214018694455 2.53418378016277 0.739707697993458 -0.602724790957632 -1.39722565176542 -0.876690605029283 -0.80819915151137 -1.24654445402601 -1.20544958191526 -0.0547931628143302
MMP0494 0.0752845508842018 -0.662504047780976 -0.195294268212972 0.877794419700648 2.27359343670289 0.316195113713648 -0.195739832298925 -0.331252023890488 -0.0301138203536807 0.331252023890488 -0.692617868134656 -0.647447137604135 0.993756071671464 -0.572162586719933 -0.572162586719933 -0.707674778311497 -0.782959329195698 0.0451707305305211 0.120455281414723 0.301138203536807 0.451707305305211 0.602276407073614 1.43040646679983 0.873300790256741 2.25853652652605 0.225853652652605 -0.135512191591563 0.511934946012572 3.55343080173432 2.28865034687973 1.68637393980612 2.4994470893555 0.752845508842018 -0.542048766366253 -1.24972354467775 -0.722731688488337 -0.557105676543093 -0.978699161494623 -1.05398371237883 -0.105398371237882
MMP0497 -0.395854538631513 -0.59073677303472 -0.452191411636423 0.0629641113488632 2.11325422930977 0.0182702094753006 -0.0182702094753006 -0.29841342142991 -0.0426304887757014 0.322773700730311 -0.103531187026703 -0.31059356108011 0.773438867787726 -0.761258728137525 -0.334953840380511 -0.359314119680912 -0.28623328177971 0.334953840380511 0.420214817931914 0.347133980030712 0.834339566038728 0.773438867787726 1.35808557099735 0.566376493734319 2.25941590511218 0.797799147088127 0.468935376532716 1.02922180044193 2.08889395000937 2.51519883776638 2.25941590511218 2.39339744126438 0.432394957582114 -0.225332583528707 -0.992681381491333 -0.456755236882515 -0.468935376532716 -0.883060124639529 -0.931780683240331 0.127891466327104
MMP0740 -0.103561157998068 -0.336573763493723 -0.609936359284085 0.552696851579512 1.66992367271885 0.323628618743964 -0.168286881746861 -0.103561157998068 0.207122315996137 0.530750934740101 -0.220067460745896 -0.220067460745896 1.2168436064773 -0.996776145731409 -0.763763540235755 -0.401299487242515 -0.504860645240584 0.0388354342492757 0.647257237487928 0.970885856231892 0.893214987733341 0.841434408734307 0.491915500490825 0.608421803238652 2.38190663395558 0.919105277232858 0.72492810598648 1.10033730372948 2.22656489695847 2.47252264720389 2.47252264720389 2.43368721295461 0.63431209273817 -0.297738329244447 -1.03561157998069 -0.569586368989377 -0.440134921491791 -0.854379553484065 -0.919105277232858 0.0776708684985514
MMP0771 -0.311443123244866 -0.615643383158456 -1.08922023287584 0.567822291099346 1.78898724282516 0.181071583281899 -0.166585856619347 -0.0217285899938279 -0.0217285899938279 0.369386029895073 -0.615643383158456 -0.528729023183145 0.514243296520593 -0.485271843195489 -0.818443556434183 -0.412843209882729 -0.239014489932106 0.0217285899938279 0.601157656495904 0.746014923121423 0.789472103109079 0.789472103109079 2.04973032275109 0.890872189746942 2.65813084257827 0.673586289808663 0.325928849907418 0.832929283096734 1.84693014947537 2.23804476936427 1.70207288284985 2.58570220926551 0.731529196458871 -0.485271843195489 -0.673586289808663 -0.282471669919762 -0.123128676631691 -0.746014923121423 -0.803957829771631 0.181071583281899
MMP0805 -0.110343152032004 -0.0514934709482686 -0.421235027019437 1.34810245328233 2.19950683050462 0.654702702056558 -0.110343152032004 -0.272179775012277 -0.228042514199475 0.345741876366946 -0.684127542598426 -0.478153658805351 0.478153658805351 -1.09607531018457 -0.419303977721616 -0.345741876366946 -0.419303977721616 0.860676585849633 0.36045429663788 0.742977223682161 0.816539325036831 0.639990281785624 1.47859823722886 0.43401639799255 2.61145459809077 0.463441238534418 0.507578499347219 0.845964165578699 1.81698390346034 2.31720619267209 1.81698390346034 2.68501669944543 0.389879137179748 -0.198617673657608 -0.684127542598426 -0.213330093928541 -0.228042514199475 -0.96366352774617 -0.993088368288038 -0.0662058912192025
MMP0834 -0.434052522407463 -0.722415651230185 0.0668293013481029 0.661016047370858 2.19005194987931 0.474291333384112 -0.534979617495415 -0.621488556142232 -0.376379896642918 0.142673735237982 -0.909851684964954 -0.549397773936552 0.820327087971379 -0.808924589877002 -0.549397773936552 -0.679161181906777 -0.635906712583368 0.416618707619568 0.243600830325935 0.171510048120254 0.575218428472065 0.575218428472065 0.96450865238274 0.89241787017706 2.59376033023112 1.07985390391183 0.243600830325935 0.676145523560018 2.31981535784953 2.43516060937862 1.90168882105659 3.05514133634748 0.834745244412515 -0.434052522407463 -0.981942467170635 -0.477306991730871 -0.304289114437238 -0.92426984140609 -1.02519693649404 -0.102434924261332
MMP1037 0.379895472672791 -0.0607832756276466 -0.726377968445955 0.932298501105791 2.53770175745425 0.379895472672791 -0.197545645789851 -0.395091291579703 -0.212741464696763 0.471070386114261 -0.866161677693964 -0.668616031904112 0.471070386114261 -0.471070386114261 -0.668616031904112 -0.121566551255293 -1.3068404259944 0.911749134414699 0.36469965376588 0.577441118462643 0.774986764252494 0.805378402066317 1.12449059911146 0.36469965376588 2.49211430073351 0.349503834858968 0.303916378138233 0.911749134414699 1.8234982688294 2.32496029275748 1.8234982688294 2.72005158433719 0.258328921417498 -0.151958189069116 -0.699007669717936 -0.288720559231321 -0.410287110486614 -0.805378402066317 -0.957336591135434 0.0607832756276466
MMP1184 -0.272120453754633 -0.454990681432884 -0.0174240734025971 -0.126834797250997 3.01954364445388 0.45936045695837 -0.531186609632155 -0.211163711195216 -0.256881268114779 0.108859187241722 -0.531186609632155 -0.363555567593759 0.886057654874288 -0.394033938873467 -0.485469052712593 -0.0435326691568199 -0.33307719631405 0.0174240734025971 0.672709055916329 0.703187427196037 0.840340097954726 0.931775211793851 1.57182100866773 0.886057654874288 2.45569377577927 0.779383355395309 0.383164528759099 0.977492768713414 2.31854110502059 2.48617214705898 2.12043169170248 2.83667341677563 0.794622541035163 -0.424512310153176 -0.957883807548074 -0.409273124513321 -0.394033938873467 -0.866448693708948 -1.0493189213872 0.0631416303221597
MMP1281 0.0332653617215704 -0.316020936354919 -0.5809361145375 0.581424050863232 2.59469821428249 0.881532085621616 0.0332653617215704 -0.316020936354919 0.216224851190208 -0.0166326808607852 -0.532245787545127 -0.316020936354919 1.13102229853339 -0.399184340658845 -0.565511149266697 -0.731837957874549 0.0831634043039261 0.0498980425823556 0.498980425823556 0.133061446886282 0.532245787545127 0.482347744962771 1.28071642628046 0.898164766482401 2.11235046931972 0.731837957874549 0.465715064101986 0.698572596152979 1.74643149038245 2.34520800137072 2.14561583104129 2.56143285256092 0.815001362178475 -0.515613106684342 -1.31398178800203 -0.748470638735334 -0.266122893772563 -0.615409191849053 -0.815001362178475 -0.149694127747067
MMP1571 -0.368888130813579 -0.564624690020785 -0.0747164991539408 0.39893035007372 1.96489392127233 0.579681348421339 -0.203264888407482 -0.414058106015242 -0.188208230006928 0.15809491320582 -0.670021298824664 -0.399001447614688 0.639907982023556 -1.1518343676424 -0.805531224429653 -0.670021298824664 -0.594738006821893 -0.112924938004157 0.188208230006928 1.72398738686346 0.338774814012471 0.534511373219676 1.54330748605681 0.685077957225219 2.62738689089672 0.715191274026327 0.233378205208591 0.850701199631315 2.23591377248231 2.43165033168951 1.93478060447122 2.61233023249616 0.489341398018013 -0.489341398018013 -1.06149441723908 -0.534511373219676 -0.429114764415796 -1.03138110043797 -1.10666439244074 -0.0225849876008314
[+] Show/hide bicluster #26 motif PSSM #1. bicluster 26 motif PSSM #1 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 0 0 1
2 0 1 0 0
3 0 0 1 0
4 0.666667 0 0.333333 0
5 0 0 1 0
6 0 0 1 0
7 0 0 1 0
8 0 0 1 0 [+] Show/hide bicluster #26 motif PSSM #2. bicluster 26 motif PSSM #2 Methanococcus maripaludis S2 11x4
POSITION A C G T
1 0 0 0.833333 0.166667
2 1 0 0 0
3 0 0 0.5 0.5
4 0.666667 0.333333 0 0
5 0 0 0 1
6 0 0 0 1
7 0 0 0 1
8 0.333333 0 0 0.666667
9 0 0.666667 0 0.333333
10 0 0 0.833333 0.166667
11 0 0 1 0 |