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bicluster 24
Methanococcus maripaludis S2
27x37
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bicluster 24 genes
Methanococcus maripaludis S2
27
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bicluster 24 short names
Methanococcus maripaludis S2
27
short_name
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bicluster 24 long names
Methanococcus maripaludis S2
27
long_name
[+] Show/hide bicluster #24 rows (NCBI RefSeq gene IDs).
bicluster 24 NCBI RefSeq IDs
Methanococcus maripaludis S2
50
[+] Show/hide bicluster #24 gene upstream sequences.
bicluster 24 upstream sequences
Methanococcus maripaludis S2
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upstream
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bicluster 24 arrays
Methanococcus maripaludis S2
37
[+] Show/hide bicluster #24 ratios.
bicluster 24 ratios
Methanococcus maripaludis S2
27x37
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0300m
MMP0076 0.255011393140728 0.378241515230987 0.654337955194622 -0.543178307878451 -0.310352328721346 -0.114622313217071 -0.00206535306072246 -1.44568404544033 -5.25280369161829 -0.938375052364938 0.24852559724124 0.721988697903814 0.728474493803302 0.229068209542779 -0.581656277893136 0.125295475150981 0.267982984939702 0.216096617743804 -0.231423299320821 0.68307392250689 0.0150369448596971 -0.659485828686983 -1.13294892934956 -0.387082400908516 0.0604375161561084 -0.322224441913643 -1.61938362181111 -2.09284672247368 -1.4702103161229 -1.50912509151982 0.644159147109967 0.0020653530607225 -0.0952215854315872 0.579301188115093 0.61173016761253 -0.108193177230562 1.02682110517972
MMP0134 -0.899129749503543 -1.33754318575879 0.184797821315905 -1.2031455192126 -0.148440560391787 -1.03267704012121 -0.484703373723939 -1.53473420596135 -3.91799348678851 0.288239973687757 0.343041653219663 0.178636614623945 0.032498802538862 0.781455089474912 0.215171067645215 0.872791222028089 0.763187862964277 1.56694582943223 0.580515597857924 -0.0223028769930442 0.470912238794111 -0.369380180695117 -1.61155158341832 -1.68462048946086 -1.33754318575879 -1.57501713039705 -0.588586898822741 0.0873004820707682 -0.314578501163211 0.233438294155851 -0.296311274652575 -0.826060843461001 -1.10006924112053 -1.30100873273752 -1.17313814716307 -0.899129749503543 -1.31927595924816
MMP0319 0.49661784557015 0.175276886671818 1.46301240355631 -0.244476328118714 0.347795090424307 0.346329434835562 0.915443485338809 -2.99595153078794 -4.49575687040661 0 -0.116851257781212 -0.214227305932221 -0.30186574926813 1.12956215855171 1.37300227892924 0.0584256288906058 0.165539281856717 -0.0779008385208078 0.214227305932221 -0.20448970111712 -0.954285271879895 -0.89585964298929 -0.944547667064795 -1.30483904522353 -1.26588862596313 -0.954285271879895 -1.11982455373661 -1.05166132003091 -0.788745990023179 -0.107113652966111 -0.223964910747322 0.00973760481510098 -0.116851257781212 0.0584256288906058 0.350553773343635 0.632944312981563 0.408979402234241
MMP0340 0.250939482589964 0.250939482589964 0.800728172822459 0.313958026810397 0.487758851434074 0.718389234188741 0.85401314513154 -4.21735660155205 -4.50313141046058 -0.409224386992865 0.247078875165503 0.347454668201489 0.0965151856115248 0.220054623194276 0.166006119251823 0.335872845928106 0.270242519712269 0.189169763798588 -0.162145511827362 -0.366757705323794 -0.953570033841864 -0.675606299280673 -0.710351766100822 -1.088691293698 -1.34349138371242 -1.47861264356856 -1.27013984264767 -1.27786105749659 -1.1079943308203 -1.37437624310811 -0.335872845928106 0.281824341985652 0.42852742411517 0.675606299280673 0.806866951712347 0.208472800920893 0.38992134987056
MMP0419 -0.982266722428932 -0.169078698123013 -0.0467665720996986 -0.0482813884130156 0.662408878733775 0.479661685550116 0.210873040099459 -2.65448905583795 -1.87938888664779 -0.261669413761806 0.0966163989274359 0.829290757460492 1.20770498659295 -0.265695097050449 0.0402568328864317 -0.0281797830205022 -0.0885650323501496 0.515287460946325 0.897727373367425 -0.237515314029947 -0.334131712957382 0.261669413761806 -0.499184727791752 -1.17147383699516 -1.01044650544943 -0.684366159069338 -0.845393490615064 -0.728648675244412 -0.144924598391154 0.744751408398985 -0.189207114566229 0.982266722428932 0.567621343698686 -0.0281797830205022 -0.293874880070951 -0.479056311348536 0.0281797830205022
MMP0637 -1.04875025534101 -1.00125967774066 0.380093790155289 0.186739196135521 0.158266149099366 -0.22844303894017 0.163388918129634 -3.60780006244438 -4.33225433911152 0.423457650269766 -0.423457650269765 -0.043533029466985 0.0277028369335361 -0.399712361469592 0.0831085108006082 -0.249325532401825 -0.676740730804952 -0.383882168936142 -0.668825634538228 0.217665147334926 -1.01708987027411 -0.415542554003041 -1.04875025534101 -0.787552078539096 -0.558014286804083 -0.795467174805821 -0.470948227870113 -1.22288237320895 0.178089666001303 0.763806789738923 0.0118726444000869 0.866703041206342 1.11998612174153 1.43658997241051 1.594891897745 0.81129736733927 0.819212463605995
MMP0655 0.767905665571919 0.572063952204584 1.31989055958382 0.679383876313995 0.495850046726131 0.367391885439665 0.780381782536902 -4.02322440715325 -3.15403736478579 -0.0773059394871059 0.716368372580515 0.7782131241702 0.278301382153581 0.546295305708882 0.881287710153008 0.0927671273845271 0.0309223757948424 0.149458149675071 -0.0309223757948424 -0.211302901264756 -1.13897417511003 -1.44304420375931 -1.62342472922922 -1.48942776745157 -1.15958909230659 -1.02559213052894 -1.06166823562292 -1.11835925791347 -0.870980251554727 -1.03074585982808 -0.267993923555301 -0.226764089162177 -0.0360761050939828 0 -0.113382044581089 0.242225277059599 0.329838675144985
MMP0679 -0.826131292799431 -0.546810212328763 1.2000281979815 -0.0495688888454325 0.655991001993844 0.528712202108435 0.233197545069982 -3.53403795312074 -3.35786835911194 -0.488242889004268 -0.470222174135192 -0.123323412905491 0.110945880392488 -0.524284318742418 -0.605377535653258 0.840784832590041 0.813753760286428 1.36338556379323 1.34987002764142 -0.434180744397042 -0.627903429239602 -0.407149672093429 -1.01985397764199 -1.27664916452631 -1.15951451787732 -0.988317726621109 -0.839646828951237 -0.812615756647624 -0.425170386962504 0.146987310130639 -0.429675565679773 0.759691615679202 0.439823926753114 0.349720352407737 0.160502846282446 -0.0782716257328031 0.0884199868061441
MMP0702 0.0237995177957801 0.129575152443692 0.968200569776951 0.649943390281614 0.797768198078471 0.544706777690304 0.265535207788946 -4.47783412823518 -4.15647238626389 0.404591802528263 0.208906878429626 0.436324492922637 0.483923528514197 0.0237995177957801 -0.129575152443692 -0.356992766936703 -0.272372259218373 0.0555322081901537 0.150730279373275 -0.563255254500131 -1.13973246333125 -1.0762670825425 -1.54696865672571 -1.45705936727499 -1.43061545861301 -1.46234814900738 -0.959913884429801 -0.965202666162197 -0.875293376711471 -0.642586980486065 -0.531522564105758 -0.0713985533873406 -0.0608209899225494 -0.404591802528263 -0.483923528514197 -0.129575152443692 -0.28823860441556
MMP0713 0.150555241088491 0.318482240764115 0.326820488006008 0.0335371643521146 0.382078031157098 0.556479201519424 0.687999123884373 -4.35647411708211 -4.41024998819978 -0.330063413155537 0.266366965002714 0.573268033375407 0.376388102721227 0.0694870343485342 -0.150555241088491 0.799100895008143 0.671707998702497 0.306901068372693 -0.063696448152823 -0.306901068372693 -0.573268033375407 -0.914912618922367 -1.53450534186346 -1.73138527251764 -1.54608651425489 -1.30288189403502 -1.07125844620657 -0.995980825662323 -0.8801691017481 -0.78172913642101 -0.29531989598127 0.14476465489278 0.665917412506786 0.932284377509501 0.874378515552389 -0.191089344458469 0.469037481852606
MMP0714 0.299843192549886 0.40567020168514 0.351154646698276 0.189656827910211 0.408585923923721 0.608400763080519 0.69441494539248 -4.57439610457006 -4.47829384502671 -0.599686385099772 0.482100819393935 0.505617932535102 0.370394531973389 0.146981957132297 -0.111706287420546 0.734909785661486 0.740789063946778 0.429187314826308 -0.111706287420546 -0.152861235417589 0.0587927828529189 -0.81134040337028 -1.68735286787877 -1.75790420730227 -1.3757511187583 -1.12294215249075 -0.411549479970432 -0.235171131411675 -0.382153088543973 -0.146981957132297 -0.182257626844048 0.0411549479970432 0.576169271958605 0.940684525646702 0.787823290229113 -0.276326079408719 0.493859375964518
MMP0715 0.163747785827088 0.459135948495562 0.448192247307975 0.0115143012171169 0.442779683044874 0.516525867918886 0.565818863886415 -3.25748116287907 -4.94939073086787 -0.645358920612643 0.0224751862899926 0.587565584438376 0.369235203335592 -0.189433713015651 -0.748102629366894 0.53619373006125 0.427028539509858 0.337127794349888 -0.138061858638526 -0.292177421769903 -0.337127794349888 -0.671044847801206 -1.1911848733696 -1.54436637221234 -1.46088710884951 -1.300350063921 -1.51868044502378 -1.5379448904152 -1.14623450078962 -1.24897820954387 -0.285755939972762 -0.00963222269571105 0.555458175452673 0.97927597406396 0.97285449226682 0.00963222269571109 0.818738929135442
MMP0814 -0.618059731475058 -1.12377363632621 0.0433848395987477 -0.641903559751567 0.476101447867166 0.808365988411397 0.596620871647061 0.585318571977228 -5.60395903844385 0.0945371344515673 0.186485117151777 -0.280917128240956 -0.204293809324114 -0.740657041742005 -0.618059731475058 -0.250267800674219 -0.303904123916008 -0.319228787699377 -0.311566455807693 -0.0970211628405363 0.186485117151777 -0.319228787699377 -0.47247542553306 -1.44559157577695 -1.42260458010189 -0.870916683900635 -0.993513994167581 -1.28468260605158 -1.18507229145969 -1.07779964497611 -0.142995154190641 0.584926375519353 0.584926375519353 0.684536690111246 0.447004401469038 0.278433099851987 0.74583534524472
MMP0815 -0.555526764992963 -0.824698872626 -0.153178596061678 -0.889502561373625 0.0654954921225615 0.167820419911844 0.23752602951897 -3.65705429312956 -5.0127297573831 0.403830234006837 0.265793255733485 -0.169023225827576 0.0794433350644587 -0.665956347611645 -0.91442290850368 -0.403686088892275 -0.548624916079295 -0.396784239978608 -0.382980542151272 0.231284011165146 0.521161665539187 -0.0654954921225615 -0.67976004543898 -1.11457652700004 -0.79709147697133 -0.396784239978608 -0.376078693237605 -0.431293484546946 -0.431293484546946 -0.686661894352648 0.176069219855805 0.548769061193857 0.534965363366522 0.679904190553542 0.459045025316178 0.486652420970849 0.659198643812539
MMP0880 -0.122881585120644 0.0307203962801609 1.54048027730614 -0.839546550756569 0.171233699402534 0.57790397695767 0.780314339646017 -3.50082090311377 -4.06666826886624 -0.529926835832776 0.222722873031167 0.215042773961126 0.00768009907004022 -0.00768009907004024 0.215042773961126 0.460805944202414 0.399365151642092 0.0921611888404827 -0.0307203962801609 -0.545287033972856 -1.03681337445543 -0.829450699564345 -0.890891492124666 -1.28257654469672 -1.29025664376676 -1.28257654469672 -0.783370105144103 -0.783370105144103 -0.821770600494305 -1.06753377073559 -0.514566637692695 0.253443269311328 0.67584871816354 1.05985367166555 1.35169743632708 0.983052680965149 0.560647232112937
MMP0953 -0.105089445845092 0.0116766050938991 1.93155427447647 -0.150033687470741 0.296723880270088 0.536095950557346 0.771835841573273 -3.15677185299795 -3.96604394918112 -0.673350893748182 0.151795866220688 0.330837144327141 -0.0739518322613611 -0.151795866220688 1.30388756881873 0.821254558270904 0.727841717519711 0.720057314123778 0.424249985078334 -0.330837144327141 -0.720057314123778 -1.32724077900653 -1.94999305068115 -1.84101140313809 -1.50628205711298 -1.39730040956993 -0.906882995626164 -0.688919700540047 -0.790116944687173 -0.579938052996989 -0.354190354514939 0.595506859788854 0.78233254129124 1.00808023977329 0.743410524311576 0.556584842809191 -0.0116766050938991
MMP1017 0.14940095263719 0.232401481880073 1.12683845281641 -0.243707675639323 0.110089113169978 0.32804725795385 0.470548741797408 -2.95265173596169 -4.29138280981922 -0.879805609974561 -0.0110667372323844 -0.0110667372323844 -0.116200740940036 -0.409469277598224 -0.348602222820109 0.22686811326388 0.381802434517262 0.304335273890571 -0.193667901566727 0.0110667372323844 -1.47740942052332 -0.957272770601252 -0.780204974883102 -0.918539190287907 -1.36674204819948 -1.44974257744236 -1.30034162480517 -1.2782081503404 -1.34460857373471 -1.42760910297759 0.0442669489295376 0.514603281305876 0.630804022245912 0.835538661045024 1.30034162480517 0.957272770601252 0.846605398277408
MMP1270 -0.753676723885857 0.969012930710387 -0.966974868260724 0.425545456673879 0.104284361938914 -0.0726814910236221 0.243004850787345 -4.05512626852959 -4.25789154381832 -1.25325672371877 0.874264999707594 1.2360298271728 1.2360298271728 -0.719222930793932 -0.9173322410725 1.41691224090541 0.865651551434613 0.710609482520951 0.0129201724094716 -0.49527327569642 -0.21102948268804 -0.865651551434613 -1.14989534444299 0.0559874137743778 0.641701896337101 -0.00430672413649061 0.271323620598908 0.00430672413649038 0.0301470689554341 0.874264999707594 -0.56418086188027 0.167962241323134 -1.24464327544579 -0.297163965417852 -0.0473739655013968 0.064600862047359 -0.443592586058533
MMP1363 -0.194219465807236 -0.0817766171819943 0.898742294733138 0.0563719784722121 0.225051185864788 0.336444084057876 0.444195684151471 -1.61698319207963 -4.27261651446788 -0.637176142209706 0.773470504179696 0.701915964145451 0.483844984993466 -0.313477032530978 -1.15168735864642 0.889320711854188 0.57925103837246 0.480437625944216 0.0681471809849952 -0.371402136368224 -0.896135429952687 -1.29479643871491 -0.926801661395935 -0.412290444959221 -0.817766171819943 -1.40042456924165 -1.58782931695039 -1.73775311511738 -1.65938385698463 -1.78204878275763 -0.43273459925472 0.0988134124282431 0.463400830697968 1.22664925772991 1.57419988075339 0.885913352804938 0.262366646792232
MMP1537 -0.939483131616724 -0.189725303951796 1.72795952785038 -0.579061916839169 0.220795428339523 0.532370967562651 0.329723006845903 -3.32798665692397 -3.3311519561763 -0.601177770353281 -0.180581915809541 -0.244585632805327 -0.308589349801114 0.0388593996045847 0.313161043872241 -0.011429235177819 -0.0342877055334571 0.491457112646218 0.683468263633578 -1.34636390394708 -1.21835646995551 -1.76238806441969 -1.96354260354931 -1.86753702805563 -1.6480957126415 -1.25950171659566 -1.67095418299714 -1.52465997272106 -1.41036762094287 -1.36922237430272 -1.36465068023159 0.262872409089838 0.605749464424409 0.628607934780047 0.509743888930729 0.331447820156752 -0.400023231223666
MMP1538 -1.0977561845139 -0.411364737237543 1.69152637890887 -0.53725758848341 0.196259083790255 0.330352667372125 0.447109615545564 -2.29264520707378 -3.30602473897788 -0.505390962891839 -0.0775716361647939 -0.289130643886959 -0.289130643886959 0.190403106949949 0.312637200300533 -0.0211559007722165 0.0446624571857904 0.571209320849846 0.763963083441152 -1.48796502097923 -1.3845361727595 -1.84056336718284 -2.12264204414572 -2.16025253440744 -1.93458959283713 -1.74183583024583 -1.52557551124095 -1.57728993535081 -1.29521125838792 -0.895599799357166 -1.45505584200022 0.218610974646237 0.646430301373282 0.740456527027578 0.58531325469799 0.364351624410396 -0.383156869541255
MMP1540 -0.949640350920055 -0.75779381538065 2.58554562997014 -0.0675611172025886 0.719303913540528 0.216576570757073 0.645670680826236 -2.0680752070696 -1.54628984863031 0.354916090747899 0.297362130086078 0.354916090747899 0.00959232677697026 1.46762599687645 0.872901736704293 1.17985619356734 1.33333342199886 0.37410074430184 0.77697846893459 -0.642685894057007 -0.546762626287304 -1.52517995753827 -1.64028787886191 -0.738609161826709 -0.930455697366114 -1.62110322530797 -0.911271043812174 -0.412470051409721 -0.661870547610947 -0.412470051409721 -0.508393319179423 -0.37410074430184 0.239808169424256 0.258992822978197 0.565947279841245 0.412470051409721 -0.37410074430184
MMP1541 -0.356818984391332 -0.778593942943521 0.0854317942789625 -0.00945926908820117 0.171802709350835 0.362670734563649 -0.245935146940514 -3.42344922594322 -1.53932704831328 -0.673150203305474 -0.279123597289613 0.259194441915155 0.625472695394688 1.08054567699047 0.553326978800235 -0.312421620333207 -0.517759429102036 0.203697736842499 0.98065160785969 -0.451163383014848 -0.678699873812739 -1.12267351439399 -1.52779946142438 -1.66099155359876 -1.20591857200298 -0.739746249392662 -0.329070631855004 0.153750702277108 1.08609534749774 1.79090350192047 -0.367918325405863 0.159300372784374 -0.157030846129768 -0.739746249392662 -1.02832911577048 0.00945926908820102 -0.0793354590280494
MMP1590 0.101372523120395 -0.0389894319693827 1.97089421709853 0.222552410682557 0.225134540399934 0.0373427211080422 1.08569053670926 -1.56733834354963 -4.82670006814511 0.319713342148938 -0.538054161177481 0.0545852047571356 -0.194947159846914 0.912352708083555 -0.241734478210173 0.912352708083555 0.553649933965234 0.163755614271407 -0.00779788639387654 -0.319713342148938 -0.335309114936691 -1.6297582563202 -1.97286525765076 -1.44260898286716 -1.14628929989985 -0.974735799234567 -1.02152311759783 0.0389894319693825 0.0233936591816294 -0.179351387059161 -0.475671070026469 -0.0545852047571358 0.38209643329995 0.943544253659061 0.600437252328493 0.553649933965234 -0.210542932634667
MMP1659 -0.0668650405272514 -0.395111603115576 1.25611628118502 -0.140061543899308 0.407613457001197 0.482454439179981 0.194618566214787 -4.39245690756387 -4.83400043367389 -0.0425504803355236 0.261381522061073 0.820616406470811 0.56531352445767 0.431583443403168 -0.115494160910707 -0.358639762827984 -0.480212563786623 -0.34648248273212 -0.297853362348665 0.516684404074214 -1.19749208944259 -1.4649522515516 -1.18533480934673 -0.662571765224581 -0.869245526854267 -0.978661047717042 -0.358639762827984 -0.261381522061073 -0.674729045320445 -0.626099924936989 0.443740723499031 0.151966001198298 0.334325202636256 0.50452712397835 0.577470804553534 0.0911796007189788 0.419426163307304
Unanno_2 -1.05752385228835 -0.0510528756277135 0.416791495151031 -1.23831705553409 -1.00639987702252 -0.6444363599564 -0.25751740961052 -3.1161949068156 -4.47198465834214 -0.478924595174266 -0.401129737074893 0.882485421564764 0.615065596848169 -0.0170176252092379 -0.615065596848169 0.746344419890861 1.11586999586288 0.658825204529066 0.153158626883141 0.143434269620719 -0.44488934475579 -0.459475880649422 -1.84519679054451 -2.05427047168657 -1.94730254179993 -1.82574807601966 -0.931107207876872 -1.13045653175652 -1.13045653175652 -0.804690563465391 0.177469520039195 0.172607341407984 0.235815663613725 0.848450171146288 1.04293731639472 -0.376818843918838 0.605341239585747
Unanno_4 -0.645113161258319 0.0258045264503328 0.418266962677872 -1.03182752012123 -0.739812859404515 -0.23412019684226 -0.0445227924935967 -3.10001073072535 -4.42032091899037 -0.343398698146736 0.363248333877761 0.994466750124362 0.71657184989001 -0.109172996520639 -0.657022942696934 0.895218571469236 1.08577507448708 0.529985274018373 0.0496240893275629 0.160782049421304 -0.478376221117707 -0.518075492579758 -1.88373043087429 -2.10604635106177 -2.05840722530731 -1.93136955662875 -1.00637653156298 -1.22869245175046 -1.34382033899041 -1.1850232531422 0.180631685152329 0.192541466590944 0.311639280977096 0.815820028545136 0.974617114393337 -0.28384979095366 0.672902651281754
[+] Show/hide bicluster #24 motif PSSM #1. bicluster 24 motif PSSM #1 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0.222222 0.333333 0 0.444444
2 0.777778 0.166667 0.055556 0
3 0 1 0 0
4 0 1 0 0
5 0.611111 0.111111 0 0.277778
6 0 1 0 0
7 0 0.833333 0 0.166667
8 0.611111 0 0.222222 0.166667 [+] Show/hide bicluster #24 motif PSSM #2. bicluster 24 motif PSSM #2 Methanococcus maripaludis S2 7x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0 0 1 0
4 1 0 0 0
5 0 0 1 0
6 0 0 1 0
7 0 0 1 0 |