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[+] Show/hide bicluster #18 rows and columns.
bicluster 18
Methanococcus maripaludis S2
12x38
[+] Show/hide bicluster #18 rows (genes).
bicluster 18 genes
Methanococcus maripaludis S2
12
[+] Show/hide bicluster #18 rows (short gene names).
bicluster 18 short names
Methanococcus maripaludis S2
12
short_name
[+] Show/hide bicluster #18 rows (long gene names).
bicluster 18 long names
Methanococcus maripaludis S2
12
long_name
[+] Show/hide bicluster #18 rows (NCBI RefSeq gene IDs).
bicluster 18 NCBI RefSeq IDs
Methanococcus maripaludis S2
24
[+] Show/hide bicluster #18 gene upstream sequences.
bicluster 18 upstream sequences
Methanococcus maripaludis S2
12
upstream
[+] Show/hide bicluster #18 columns (arrays; conditions).
bicluster 18 arrays
Methanococcus maripaludis S2
38
[+] Show/hide bicluster #18 ratios.
bicluster 18 ratios
Methanococcus maripaludis S2
12x38
GENES ss_HighFormate_HighH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0005m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0020m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0180m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0000m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0090m ts_HighH2_to_LowH2_0300m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0300m
MMP0158 0.0319998841937842 0.843646220143476 -0.227180142897386 0.520639035408488 0.497722813499212 -0.991121795909342 -0.621471435131914 -0.0454735196437985 0.277893731156547 0.709050065557007 0.702313247832 0.237472824806504 -0.183578283006446 0.230736007081496 0.439577356556719 -0.44968258314423 -0.463156218594245 0.645050297169439 1.0795750404324 0.981891183419799 0.453050992006734 -0.362103952719137 -0.257683277981525 -0.685471203519482 -0.250946460256518 -1.19073253289502 -1.31199525194515 -1.65557295592052 -1.9183088471958 -2.27872859548368 -1.78694090155816 -0.27115691343154 -0.0926312437188489 1.5477838723204 1.65894136478302 1.21094298607004 0.907786188444719 0.557471666744345
MMP0159 0.00546072003650107 1.10691062066789 -0.371559550486817 0.68033400637252 0.663128475255433 -0.746355189195906 -0.577016083856952 -0.12923704086386 0.314901522104898 0.791804405292662 0.777242485195326 0.271215761812889 -0.14743944098553 0.198406161326207 0.445958802980925 -0.507846963394604 -0.413194482761918 0.649825684343633 1.14493096765307 1.14129048762873 0.493285043297268 -0.387711122591579 -0.303980082031896 -0.737197204927651 -0.274856241837223 -1.21410008811542 -1.3196740088211 -1.62183385084083 -1.88030793256855 -1.9494770530309 -1.76381257178986 -0.300339602007562 -0.0964727206448531 1.69100297130318 1.82934121222787 1.39976456935645 1.01751416680138 0.613420884100292
MMP0259 -0.206718575739111 0.55534148706065 -0.450234338723932 0.22562458471056 0.232506938878703 0.0568622770504774 -0.771561547719346 -0.387314628004901 0.181370813172479 0.99213181376996 0.784638477124159 0.100678960032445 -0.2489857369077 0.212110566749635 0.500295756535469 -0.71392450976218 -0.63707512581929 0.20826809755249 1.34948144910439 1.19578268121862 0.392706619015424 -0.168293883767667 -0.245143267710556 -0.909890438816547 -0.425739319976345 -0.932945253999414 -0.898363031225114 -1.15580846743379 -1.56695267152825 -1.90893243007411 -1.93582971445412 -0.475691419539223 -0.199033637344822 1.44938564823015 1.42248836385014 0.999816752164248 0.869172799461337 0.411918965001146
MMP0260 -0.0475412465331772 0.642147037319855 -0.428579813154631 0.257410478798588 0.314178799859321 -0.249449522748704 -0.784430567797424 -0.146585510143963 0.206012068310435 0.998366177196722 0.768583485619699 0.170356133410552 -0.063388328710903 0.503144859142792 0.621997975475735 -0.554647876220401 -0.443718300976321 0.396177054443144 1.50943457742838 1.16476054006284 0.396177054443144 -0.0871589519774916 -0.22185915048816 -0.80027764997515 -0.22185915048816 -0.80027764997515 -0.776507026708561 -1.10533398189637 -1.48962572470622 -1.82637622098289 -1.94522933731584 -0.277323938110201 -0.130738427966237 1.47377864252849 1.26380480367363 0.851780667052759 0.804239420519581 0.503144859142792
MMP0298 -0.0910560771863642 0.732372996723091 -0.168767539803798 0.506335741614689 0.425441011839939 -0.466206089147657 -0.832829974265527 -0.00222087993137474 0.370886948539581 0.872805813030272 0.690693658657544 0.0732890377353664 -0.197658313892352 0.268726471696343 0.362003428814082 -0.681810138932045 -0.117706636362861 0.823946454540028 1.63678850942318 1.02382564836375 0.513023264147564 -0.233192392794347 -0.233192392794347 -0.544115583186811 -0.433071586618074 -0.797295895363531 -1.037150927952 -1.71674018695267 -2.16979969295312 -2.28972720924735 -1.97436225899214 -0.357561668951333 -0.326469349912086 1.5213027529917 1.42358403601121 0.846155253853775 0.628509020579051 0.424188066892575
MMP0576 -0.359211128888169 0.738556860999806 -0.307058903406017 0.401201982425048 0.34304052964527 0.274832166217587 -0.97159836000443 -0.26735304422073 0.112327039071352 0.675723291698312 0.614484568586685 0.124574783693677 -0.340839511954681 0.308290953028555 0.626732313209011 -0.696024106002113 -0.849120913781178 0.455263888496458 1.3983402244155 1.46570281983829 0.522626483919246 -0.530679553600722 -0.738891212180251 -1.26554423094024 -0.683776361379787 -1.54111848494255 -1.30228746480721 -1.38189780485232 -1.85343597281185 -1.84118822818952 -1.60848108036534 -0.68990023369095 -0.402078235066307 1.86375452006386 1.74127707384061 1.12276597041318 0.865563333344352 0.314414825339718
MMP0577 -0.138424661280189 0.9351763742975 -0.226962994524866 0.851383491216977 0.687964716615985 0.0974286992446412 -0.80647411354545 -0.210646223687244 0.0180553906017638 0.794437186477608 0.686104842867025 0.090276953008819 -0.306941640229985 0.433329374442331 0.565735572188599 -0.511569400383308 -0.601846353392127 0.571754035722521 1.49257895641247 1.52267127408208 0.541661718052914 -0.451384765044095 -0.704160233468789 -1.23980348798778 -0.716197160536631 -1.71526210716756 -1.34813583159836 -1.60692976355698 -1.8958160131852 -1.64304054476051 -1.46850510227679 -0.716197160536631 -0.397218593238804 1.95600064852441 1.76942827897285 1.14952653497896 0.788418722943686 0.300923176696063
MMP0578 -0.325969376921934 0.917252365324251 -0.245614585440897 0.640481698282498 0.650697614277903 0.11382434919525 -0.468860062695933 0.0357226714434997 0.0223266696521873 0.593889412748182 0.495652066278558 -0.0133960017913123 -0.250058700104497 0.330434710852372 0.544770739513369 -0.357226714434996 -0.352761380504559 0.500117400208995 1.3351348452008 1.35746151485299 0.388484051948059 -0.317038709061059 -0.486721398417682 -0.875205450365741 -0.656404087774306 -1.67450022391405 -1.54500553993136 -1.88437091864461 -2.0987069473056 -2.10763761516648 -1.75487623466192 -0.620681416330806 -0.111633348260936 1.66556955605317 1.48249086490524 1.04488813972236 0.687661425287368 0.236662698313185
MMP0625 -0.0388083899623903 0.865398104011155 -0.301820035138192 0.448814272463004 0.492864128139407 -0.471559732849173 -0.687136786981146 -0.180344871001696 0.171213485128192 0.837804653893955 0.700833865791401 0.171213485128192 -0.253395957989725 0.157516406317937 0.541034613005088 -0.709965251664905 -0.477114911890563 0.64604555055038 1.50439582265972 1.36285934162041 0.490811990700818 -0.472549218953811 -0.449720754270052 -0.814976189210196 -0.550165998878592 -1.14827177359308 -1.15283746652983 -1.45417320035545 -1.75550893418107 -1.91987387990413 -1.99749065982891 -0.550165998878592 -0.294487194420491 1.65962938250928 1.84225709997935 1.36742503455716 0.924552819692239 0.477114911890563
MMP0626 -0.0171197168471394 0.789142682594501 -0.312750361681574 0.353345755610965 0.390322465111862 -1.08082231505701 -0.885945346839463 -0.0770387258121272 0.299595044824939 0.821746408662691 0.654829169403081 0.0984383718710515 -0.213996460589242 0.115558088718191 0.479352071719903 -0.629149594132372 -0.320994690883864 0.637709452555942 1.36957734777115 1.24117947141761 0.449392567237409 -0.440832708813839 -0.436552779602054 -0.492191859355257 -0.342394336942788 -1.06570237373443 -1.08282209058157 -1.40809671067721 -1.88316885318533 -1.71197168471394 -2.07148573850387 -0.338114407731003 -0.124117947141761 1.57073402072504 1.6092533836311 1.15130095797012 0.894505205263033 0.505031646990612
MMP0627 -0.0469914284275079 0.620976066775993 -0.246988455456643 0.382442015425599 0.407374038313049 -1.08660237929111 -0.88892118775369 -0.0274116665827129 0.30936023714776 0.650048093247192 0.485578093750914 0.0822349997481387 -0.305444284778801 0.0861509521170977 0.419006903478612 -0.689207616936782 -0.305444284778801 0.610888569557602 1.18653356779457 1.10429856804643 0.438586665323407 -0.438586665323407 -0.465998331906119 -0.595224760081766 -0.399427141633817 -1.08080285383268 -1.11604642515331 -1.38233118624252 -1.82874975630385 -2.05195904133451 -2.14594189818953 -0.368099522682145 -0.144890237651483 1.40582690045628 1.48414594783546 1.05730713961893 0.767526664315962 0.446418570061325
MMP1147 0.0582587310123834 0.984781676064969 -0.152533341163245 0.571905495608219 0.603945391131295 -0.258838334453755 -0.676697567913069 0.0851473760950219 0.0806659352479155 0.510884256570131 0.255442128285066 -0.103073139483448 -0.380922472004045 0.188220515578469 0.452625525557748 -0.492958493181706 -1.04417571737579 0.398848235392471 0.918695373656815 0.793215029937836 0.0582587310123834 -0.483995611487493 -0.533291460805663 -1.37132089921456 -0.546735783346983 -1.15621173855346 -0.999361308904731 -1.55057853309882 -1.84187218816074 -2.14661016576397 -2.33931212218955 -0.569142987582515 -0.286812214214811 1.57298573733435 1.65365167258227 1.10243444838818 1.01728707229316 0.439181203016429
[+] Show/hide bicluster #18 motif PSSM #1. bicluster 18 motif PSSM #1 Methanococcus maripaludis S2 15x4
POSITION A C G T
1 1 0 0 0
2 0 0 0 1
3 0.2 0.2 0.6 0
4 0 0.2 0.8 0
5 0.4 0.4 0 0.2
6 1 0 0 0
7 0.6 0.2 0 0.2
8 0.6 0 0 0.4
9 0.2 0 0.4 0.4
10 0.4 0 0.6 0
11 0 1 0 0
12 0 0.8 0.2 0
13 0 1 0 0
14 0 0.2 0.2 0.6
15 1 0 0 0 [+] Show/hide bicluster #18 motif PSSM #2. bicluster 18 motif PSSM #2 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 0.333333 0 0.666667 0
2 0.166667 0.833333 0 0
3 0.166667 0.833333 0 0
4 0 1 0 0
5 0 0.833333 0 0.166667
6 1 0 0 0 |