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[+] Show/hide bicluster #16 rows and columns.
bicluster 16
Methanococcus maripaludis S2
16x39
[+] Show/hide bicluster #16 rows (genes).
bicluster 16 genes
Methanococcus maripaludis S2
16
[+] Show/hide bicluster #16 rows (short gene names).
bicluster 16 short names
Methanococcus maripaludis S2
16
short_name
[+] Show/hide bicluster #16 rows (long gene names).
bicluster 16 long names
Methanococcus maripaludis S2
16
long_name
[+] Show/hide bicluster #16 rows (NCBI RefSeq gene IDs).
bicluster 16 NCBI RefSeq IDs
Methanococcus maripaludis S2
32
[+] Show/hide bicluster #16 gene upstream sequences.
bicluster 16 upstream sequences
Methanococcus maripaludis S2
16
upstream
[+] Show/hide bicluster #16 columns (arrays; conditions).
bicluster 16 arrays
Methanococcus maripaludis S2
39
[+] Show/hide bicluster #16 ratios.
bicluster 16 ratios
Methanococcus maripaludis S2
16x39
GENES ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0045m ts_HighH2LowN_to_LowH2HighN_0060m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0090m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0010m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0045m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_0180m ts_HighH2_to_LowH2_0300m ts_LowH2_to_HighH2_0005m ts_LowH2_to_HighH2_0010m ts_LowH2_to_HighH2_0020m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0045m ts_LowH2_to_HighH2_0060m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_0300m
MMP0081 0.250103719060543 1.1850186257392 0.812460887924702 0.829704431367558 0.904183597759915 1.03889374219131 1.02415982014412 -2.6299337520766 -3.29012678420589 -1.09453993180259 0.223210846043281 -0.190939398422565 -0.422218106371025 -0.147910801594945 -0.0995036301638722 -0.970832715923185 0.379189509543404 0.416839531767572 0.029582160318989 -0.38994665875031 -0.131775077784587 -0.626603941302222 -0.266239442870901 0.400703807957215 -0.691146836543652 -0.997725588940447 -1.64315454135475 -1.41725440800975 -1.55171877309606 1.29892576673379 1.14832567783712 1.37422581118213 1.58936879532023 1.4333901318201 1.36884723657867 1.47641872864772 1.06764705878533 1.12681137942331 1.12143280481986
MMP0082 0.277775705967774 1.18031831189592 0.723148495234027 0.722103262645354 0.80893819190389 0.934607628521017 0.97746227149343 -1.83920550223946 -3.4651091285259 -1.33546012484507 0.341877791960337 -0.160255214981408 -0.379270675455999 -0.181622576978929 -0.138887852983887 -1.05234257837791 0.293801227465914 0.448714601947942 0.0213673619975211 -0.454056442447322 -0.0961531289888446 -0.598286135930589 -0.806617915406419 0.539525890437406 -0.496791166442364 -1.00960785438287 -1.59186846881532 -1.39422037033825 -1.55447558531966 1.08439362137419 1.137812026368 1.44763877533205 1.67199607630602 1.51708270182399 1.42092957283515 1.60255214981408 1.10576098337171 1.14315386686738 1.137812026368
MMP0083 0.349796897850119 1.16143680953791 0.662867240485445 0.696669858639671 0.781061954535875 1.01615421914054 0.951295917592827 -0.762336687834406 -4.07110196910174 -1.19640678105258 0.375144499143606 -0.0811123241391582 -0.334588337074027 -0.182502729313106 -0.101390405173948 -0.963208849152503 0.238267452158777 0.395422580178396 0.00506952025869739 -0.456256823282765 -0.243336972417474 -0.618481471561081 -0.724941396993726 0.588064350008896 -0.131807526726132 -0.689454755182844 -1.56648175993749 -1.48029991553964 -1.5512731991614 0.846609883202463 1.18626774053519 1.3586314293309 1.44988279398745 1.46509135476354 1.47523039528094 1.5512731991614 1.20147630131128 1.20147630131128 1.14571157846561
MMP0162 -0.471047543771266 1.35412658681443 -0.592869155091911 0.133501672266625 0.790888987251475 0.953638977555318 0.936393095218225 -2.58444867281986 -3.38721235277 -0.114579132268686 0.089117102875645 -0.250376622364907 -0.335250053675045 -0.131553818530714 -0.0212183578275345 -0.0297057009585483 0.666256435784584 0.768104553356749 -0.649281749522556 -0.742642523963708 -0.598357690736473 -0.131553818530714 -0.335250053675045 -0.0297057009585483 -1.48104137636191 -1.63381355272016 -1.5998641801961 -1.5998641801961 -1.20095905303845 0.708693151439653 1.1075982785973 1.4131426313138 1.8459971309955 1.57440215080306 1.27734514121758 1.13306030799034 0.683231122046611 0.530458945688363 0.980288131632094
MMP0163 0.349092186560326 1.24947886832989 0.632025225715832 0.82197699773982 0.96697970089197 0.959031927881195 0.916908727990536 -1.44252011793913 -1.29442661710523 -0.577908913885581 0.178946414959495 -0.0968070769453004 -0.290421230835901 -0.178946414959495 -0.108541268090185 -0.237617370683919 0.853662405790376 0.859529501362818 0.161345128242167 -0.360826377705211 -0.0850728858004155 0.202414797249264 -1.22328942685425 -1.1880868534196 -1.26435909586135 -2.3087021077561 -2.57858850408846 -2.33803758561832 -2.59032269523334 0.278687039691016 0.836061119073049 1.21155523570937 1.32303005158577 1.07661203754319 0.794991450065952 0.783257258921067 0.313889613125671 0.525105053733599 0.953403030521898
MMP0597 0.082117010981156 1.35407447238235 -0.347020051696043 0.250530757218943 0.228187969236215 0.425470058068211 0.172568677492639 -1.30091460406774 -3.44553729806486 -0.202134180876692 -0.00631669315239662 -0.309517964467434 -0.480068679582143 -0.3726848959914 -0.328468043924624 -0.517968838496523 1.15595484688858 1.45283942505122 0.0947503972859493 -0.202134180876692 -0.240034339791071 -0.265301112400658 -0.265301112400658 1.45915611820362 -0.164234021962312 -1.1180546879742 -1.69919045799469 -1.4844228908132 -1.56022320864196 0.555868997410902 0.776953257744784 1.44020603874643 1.8697411731094 1.90132463887138 1.72445723060428 1.43388934559403 0.915920507097509 0.473751986429746 0.322151350772227
MMP0639 0.764606626694545 0.85731280751705 -0.0386924617802083 0.335429619336282 0.428104592473448 0.497376236612639 0.531708478680423 -2.52772477849213 -3.08581689445015 -0.856286078336577 0.687595887315238 -0.00183358903284064 -0.247534519433486 -0.0825115064778286 0.152187889725773 -0.852618900270895 0.650924106658425 1.35502229526923 -0.0861786845435099 -0.471232381440043 -0.672927175052513 -1.00297320096383 -0.672927175052513 -0.581247723410481 -1.04331215968632 -1.18999928231357 -1.76207906055985 -1.76941341669121 -1.98944410063209 0.163189423922817 0.760939448628864 1.52737966435625 1.70340421150895 1.43203303464854 1.1056541868029 0.907626571256114 0.526240052425262 0.353882683338243 0.584914901476163
MMP0640 0.654292359078195 0.8238850138397 -0.225353851661768 0.0749451779343262 0.303960284719969 0.298078415106836 0.30277311873784 -2.7620037434952 -3.30157067699533 -1.07017133799913 0.643536868244033 0.0197183998626305 -0.277850179882521 -0.0806661812562159 0.159539780706738 -0.772602758253979 0.647122031855421 1.31396246357347 -0.0197183998626306 -0.378234761001368 -0.510885814622701 -1.04149002910803 -0.690143995192069 -0.72958079491733 -1.15263010106104 -1.31037729996208 -1.84815184167019 -1.79795955111077 -1.92702544112071 0.245583707380035 0.725995631305943 1.46812449886313 1.60077555248446 1.18131140995214 0.840720866870339 0.776187921865366 0.295775997939458 0.288605670716683 0.514470978234088
MMP0641 1.1539583176064 0.774020350091504 -0.124935470247935 0.225860913250659 0.406977451350868 0.506433891212715 0.59087299802987 -2.5308086693584 -3.48176401738018 -0.923166654085118 0.475785890951561 -0.00710128195450092 -0.323108328929791 -0.0639115375905082 0.0852153834540109 -0.681723067632087 0.649767298836833 1.37409805819593 0.00710128195450092 -0.458032686065309 -0.614260889064329 -0.983527550698376 -0.610710248087078 -0.720780118381842 -1.20011665031065 -1.27112946985566 -1.80017497546598 -1.80017497546598 -1.93154869162425 0.220139740589528 0.62136217101883 1.44156023676368 1.5764845938992 1.24627498301491 0.837951270631107 0.734982682290844 0.31600704697529 0.280500637202786 0.525494864633067
MMP1148 0.612856652991414 0.899561903635972 -0.13919946142189 0.456433984034588 0.795564677540267 0.742283904485826 0.683375886376101 -1.50704794943647 -2.62751125094271 -0.821085940494288 0.0544235637791603 -0.130143304689296 -0.305245205543986 -0.125410820882413 0.191665594178782 -0.461417171171142 0.272117818895801 0.551334363501928 -0.0922834342342284 -0.494544557819326 -0.60812416918453 -1.22807954788627 -1.15709229078302 -1.12396490413483 -1.57355086578877 -1.82910499136047 -2.08939160073907 -1.83383747516736 -2.12251898738725 0.437754752136724 0.953595487087026 1.37478654589966 1.68239799334709 1.67293302573332 1.12869738794172 1.00092032515586 0.589194233956996 0.721703780549734 0.603391685377647
MMP1306 -0.0188946714384324 1.55917804618753 -0.525651202970088 0.0524631714520088 0.33173723817984 0.10900053288547 -0.125453173850645 -1.02857204062106 -2.39707184206003 -0.759565791824984 0.170052042945892 -0.283420071576487 -0.631082026043643 -0.374114494480962 -0.306093677302606 -0.540387603139168 0.865375951880206 1.03920692911378 0.21539925439813 -0.192725648672011 -0.177609911521265 0.321209414453351 -0.857818083304833 -0.374114494480962 -1.12990135201826 -1.53046838651303 -1.87813034098018 -1.70429936374661 -1.56825772938989 1.12234348344289 1.50023691221154 1.84034099810332 2.11242426681675 1.7345308380481 1.32640593497796 1.36419527785482 1.00897545481229 1.1752485634705 1.07699627199065
MMP1308 -0.0556152928986341 1.24154022020762 -0.397209958693427 0.257490222827139 0.592699690664762 0.676409048771142 0.797601600319338 -1.32666284941923 -1.75571981182363 -0.963998410242992 0.302794372448119 0.0247179079549485 -0.228640648583274 -0.111230585797268 0.0617947698873713 -0.834229393479512 0.191563786650851 0.772434623592141 -0.166845878695902 -0.642665606828661 -0.339871234380542 -1.18028010484879 -0.531435021031393 -0.957818933254255 -1.34712598354469 -1.45835656934196 -1.42745918439828 -1.18645958183753 -1.25443382871364 0.939280502288043 1.65609983298155 2.14427851509178 2.31112439378769 2.2307911929341 1.80440728071124 1.55722820116176 0.908383117344358 0.821870439502038 1.09994690399521
MMP1426 0.176689534041607 1.29306578014996 -0.139416318496603 0.397471927168135 0.696393266599038 0.777772204227041 0.656608006475494 -1.97560178839239 -4.65025628237165 -0.240297766296586 0.0989461390633001 -0.240297766296586 -0.353379068083215 -0.14841920859495 0 -0.367514230806543 0.551271346209815 0.664352647996443 0 -0.530068602124822 -0.416987300338193 -0.289770835828236 -0.452325207146515 -0.466460369869843 -1.21562399420626 -1.20855641284459 -1.52659757411949 -1.56900306228947 -1.36404320280121 0.600744415741465 0.925853158378022 1.27923222646124 1.62554371318279 1.43471901641785 1.00359655335633 0.989461390633001 0.664352647996443 0.706758136166429 0.530068602124822
MMP1474 0.0119867693540537 1.12198017504956 -0.433711481932536 0.0273188302729753 0.355560870295318 0.722893667081967 0.743461413004686 -2.58538676559287 -1.56758385871713 -0.67525467361169 0.307660413420711 0.0199779489234228 -0.267704515573865 -0.0599338467702684 0.0439514876315302 -0.651281134903583 0.299669233851342 0.962937138108978 -0.0119867693540537 -0.507439902654939 -0.0918985650477448 -0.978919497247716 -1.28258432088374 0.155828001602698 -0.914990060692763 -1.18669016605131 -1.33852257786933 -1.09878719078825 -1.41044319399365 1.30655785959185 1.15472544777384 1.80201099289274 2.2255435100693 2.07371109825129 1.83397571117021 1.62620504236661 1.02686657466393 0.771148828444119 0.683245853181059
MMP1616 -0.316846640665128 1.73111810361791 0.0234466151981748 0.71236520380572 0.890953543591155 0.969074581409223 0.802295242660034 -1.3732849600538 -2.95169337544094 -0.347022511204664 -0.141826591535819 -0.328916988880943 -0.558253604981416 -0.310811466557221 -0.244424551370242 -0.0694045022409328 0.0211231093776752 0.0814748504567472 -0.666886738923746 -1.04106753361399 -0.860012310376777 0.159932113859541 -0.727238480002818 -0.872082658592591 -0.926399225563756 -1.31868554257772 -1.48163524349122 -1.12555997112469 -1.10745444880097 1.33075589079354 1.68079598905216 1.72907738191541 1.78942912299449 1.56612768100192 1.23419310506702 1.3790372836568 1.07124340415353 1.4635297211675 1.76528842656286
MMP1640 0.93037407111841 0.655388654337482 0.542534284999751 0.806825005177247 0.82838795843207 0.994447456873473 1.13497840745513 -2.61053082630515 -2.91117288067635 -0.91939620597247 0.161923510902614 -0.205834971486374 -0.414414409259233 -0.150945645756674 -0.0521448594432147 -0.650438509896942 0.238768566924194 0.211323904059344 -0.683372105334762 -0.96330766655623 -0.606527049313182 -0.551637723583482 -0.633971712178032 -0.573593453875362 -1.38595547467492 -1.66589103589639 -1.50122305870729 -1.61100171016669 -1.83604794565846 0.793150756794161 1.1334645763183 1.27617682321552 1.3530218792371 1.06210845286969 0.793150756794161 0.90292940825356 0.688861037907732 1.0236859248589 1.46828946326947
[+] Show/hide bicluster #16 motif PSSM #1. bicluster 16 motif PSSM #1 Methanococcus maripaludis S2 6x4
POSITION A C G T
1 1 0 0 0
2 0.111111 0.555556 0 0.333333
3 0 0 1 0
4 0 0.111111 0.888889 0
5 0 0 0 1
6 0 0 1 0 [+] Show/hide bicluster #16 motif PSSM #2. bicluster 16 motif PSSM #2 Methanococcus maripaludis S2 14x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 0 0 0 1
4 0 0 0 1
5 0 0.5 0.5 0
6 0 1 0 0
7 1 0 0 0
8 0 0 1 0
9 1 0 0 0
10 1 0 0 0
11 0 0 0.5 0.5
12 0 1 0 0
13 0 1 0 0
14 0 1 0 0 |