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[+] Show/hide bicluster #3 rows and columns.
bicluster 3
Methanococcus maripaludis S2
11x39
[+] Show/hide bicluster #3 rows (genes).
bicluster 3 genes
Methanococcus maripaludis S2
11
[+] Show/hide bicluster #3 rows (short gene names).
bicluster 3 short names
Methanococcus maripaludis S2
11
short_name
[+] Show/hide bicluster #3 rows (long gene names).
bicluster 3 long names
Methanococcus maripaludis S2
11
long_name
[+] Show/hide bicluster #3 rows (NCBI RefSeq gene IDs).
bicluster 3 NCBI RefSeq IDs
Methanococcus maripaludis S2
22
[+] Show/hide bicluster #3 gene upstream sequences.
bicluster 3 upstream sequences
Methanococcus maripaludis S2
11
upstream
[+] Show/hide bicluster #3 columns (arrays; conditions).
bicluster 3 arrays
Methanococcus maripaludis S2
39
[+] Show/hide bicluster #3 ratios.
bicluster 3 ratios
Methanococcus maripaludis S2
11x39
GENES ss_HighFormate_HighH2 ss_HighFormate_LowH2 ts_GrowthCurveInDefinedMedium_0070m ts_GrowthCurveInDefinedMedium_0334m ts_GrowthCurveInDefinedMedium_0492m ts_GrowthCurveInDefinedMedium_0649m ts_GrowthCurveInDefinedMedium_0783m ts_GrowthCurveInDefinedMedium_0849m ts_GrowthCurveInDefinedMedium_0912m ts_GrowthCurveInDefinedMedium_1444m ts_HighH2LowN_to_LowH2HighN_0000m ts_HighH2LowN_to_LowH2HighN_0010m ts_HighH2LowN_to_LowH2HighN_0030m ts_HighH2LowN_to_LowH2HighN_0090m ts_HighH2LowN_to_LowH2HighN_0120m ts_HighH2LowN_to_LowH2HighN_0300m ts_HighH2LowN_to_LowH2HighN_minus30m ts_HighH2LowP_to_LowH2HighP_0000m ts_HighH2LowP_to_LowH2HighP_0005m ts_HighH2LowP_to_LowH2HighP_0010m ts_HighH2LowP_to_LowH2HighP_0020m ts_HighH2LowP_to_LowH2HighP_0030m ts_HighH2LowP_to_LowH2HighP_0045m ts_HighH2LowP_to_LowH2HighP_0060m ts_HighH2LowP_to_LowH2HighP_0120m ts_HighH2LowP_to_LowH2HighP_0300m ts_HighH2LowP_to_LowH2HighP_minus30m ts_HighH2_to_LowH2_0005m ts_HighH2_to_LowH2_0020m ts_HighH2_to_LowH2_0030m ts_HighH2_to_LowH2_0060m ts_HighH2_to_LowH2_0120m ts_HighH2_to_LowH2_minus30m ts_LowH2_to_HighH2_0000m ts_LowH2_to_HighH2_0030m ts_LowH2_to_HighH2_0090m ts_LowH2_to_HighH2_0120m ts_LowH2_to_HighH2_0180m ts_LowH2_to_HighH2_minus30m
MMP0442 0.0293456353072264 0.356221891057452 0.768148833835418 -0.126448509899682 0.19161687809586 0.490225989599678 0.553067526314327 0.407369091702872 -2.32567862983442 -0.0107731207759636 -0.754414477912064 0.489943995682544 0.278217330026148 -0.104376469317866 -0.0152283995678043 -0.0152283995678043 -0.37182067856805 -0.434967227974343 0.0924921847135199 0.939398847339103 1.26256060018308 1.12140948974548 0.920826332807841 0.374794405588714 -0.223240562317948 -0.2269550652242 -0.828704536037115 -1.64960967831893 -1.67932570156895 -1.85390733816282 -2.00620195731918 -1.8167623091003 -0.278958105911736 -0.230669568130453 1.71944445765214 0.742530193307718 0.307933353276168 0.367365399776209 -0.0672314402553401
MMP0443 0.0798216548969812 0.402909305670477 0.932205904876841 -0.183927790155047 0.248245768644073 0.628872015521134 0.606445216932405 0.519198106976258 -1.04787442350551 -0.656034777334086 -0.840027892011088 0.273674245361078 0.193852590464097 0 -0.0608164989691285 0.0418113430412758 -0.589159833763433 -0.56635364665001 -0.0418113430412759 0.916048515722499 1.27334544716613 1.08709491907317 0.969262952320486 0.380103118557053 -0.319286619587925 -0.444720648711752 -0.843828923196658 -1.88531146804298 -1.33036091494969 -1.3151567902074 -1.97273518531111 -2.42885892757957 -0.402909305670477 -0.28127630773222 1.71806609587788 0.794415517784242 0.311684557216784 0.380103118557053 -0.201454652835238
MMP0444 -0.187289927227361 0.114790600558705 0.961463466600755 -0.184321313409221 0.251258773677683 0.607543278048917 0.480294481805758 0.450407077438045 -0.790435400148297 -0.703137510920035 -0.400760166862848 0.420898868715252 0.441037570567656 -0.187289927227361 -0.018124831667164 0.191317667597842 -0.437009830197175 -0.392704686121886 -0.114790600558705 0.956588337989209 1.3795010768897 1.41172299985355 0.972699299471132 0.396732426492367 -0.195345407968323 -0.0745131968538963 -0.77936776168805 -1.8225525176426 -1.36339011540778 -1.18214179873614 -2.26157621802501 -2.05616145913049 -0.32020535945323 -0.110762860188224 1.73394222949202 0.867978049838629 0.360482763158039 0.360482763158039 -0.199373148338804
MMP0667 0.0437708230691004 0.412696331794375 0.907375218228471 -0.104284630018528 0.30324045416112 0.514014688169207 0.571331727447144 0.608037217454311 -1.80464304369766 -1.6344330885612 -0.719092093278078 0.234486552155895 0.325154685656174 -0.015632436810393 0.015632436810393 0.0406443357070218 -0.622170985053641 -0.775368865795493 -0.140691931293537 0.737851017450549 1.09739706408959 0.831645638312907 0.709712631191842 0.181336267000559 -0.497111490570497 -0.509617440018812 -1.04424677893425 -1.22870953329689 -1.52885232005644 -1.82274213209182 -1.9571810886612 -2.17916169136878 -0.443961205415161 -0.187589241724716 1.55699070631514 0.91606079708903 0.431455255966847 0.265751425776681 -0.143818418655616
MMP0668 -0.0253094455426959 0.363823279676255 1.03246801033697 -0.12841460606083 0.303815242340107 0.561905557695865 0.685093684160112 0.663617904625297 -1.57781553082315 -1.29401141989535 -0.76877440835939 0.332186472747885 0.370150641061929 0 0.0822556980137619 0.12654722771348 -0.623245096488888 -0.765610727666553 -0.332186472747885 0.743464962816694 1.14525241080699 0.936449485079751 0.759283366280879 0.240439732655612 -0.490370507389734 -0.540989398475127 -1.009214141015 -1.0345235865577 -1.40151054692679 -1.64827764096808 -1.94249994540192 -2.13864814835781 -0.455570019768528 -0.18982084157022 1.727369658289 1.00288677962933 0.493534188082571 0.300549665819515 -0.170838757413198
MMP0669 -0.0603066485109282 0.403300711916833 0.902456052459292 -0.340646638420113 0.214869132319645 0.485251910339018 0.543571990003016 0.640923403260526 -1.01683050984856 -0.826609473685102 -0.814139754897531 0.252534090639512 0.369378222129436 -0.026384158723531 0.0716141451067274 0.0942291382983255 -0.640758140428613 -0.821678085961397 -0.557836498726086 0.75006394085467 1.23628629447403 1.12698049404797 0.870677237876527 0.143228290213455 -0.633219809364747 -0.693526457875675 -1.08551967319671 -0.844293079152995 -1.35689959149589 -1.56797286128413 -1.96750440766903 -1.94488941447744 -0.535221505534488 -0.365609056597502 1.97127357320097 1.17974881149503 0.557836498726086 0.36183989106557 -0.297764077022708
MMP1289 -0.251995028282553 0.09422422796652 0.836012219697298 -0.485567151447159 0.0938565168212501 0.443265346454913 0.353159159885275 0.385151475756093 -1.87970640928752 -2.13445757512349 -0.84801805169868 0.221317372665547 0.436060961984592 -0.199404761510542 -0.0460164834255097 0.151197016969532 -0.699012295844648 0.0416339611945089 -0.0503990056565107 1.12849947448274 1.61934196435484 1.48348377519382 1.29941784149178 0.528093928835612 -0.028486394501506 0.0153388278085033 -0.453591050908596 -0.725307429230654 -1.13288199671374 -1.35639063049479 -2.04882914299293 -2.13647958761295 -0.225699894896548 -0.265142594975556 1.68946232005086 0.795427784926669 0.146814494738531 0.177492150355538 -0.203787283741543
MMP1402 0.201133236834879 0.510568985811615 1.10021035904406 -0.137163541901503 0.380572699162477 0.703219080267765 0.751074606873323 0.714164139880715 -1.78579223209549 -1.67855393524946 -0.707834275784285 0.382926739358712 0.460285676602896 -0.116038405866276 -0.0386794686220921 0.259152439768017 -0.727174010095331 -0.468021570327314 -0.444813889154059 0.881891884583699 1.67095304447438 1.56265053233252 1.06755333396974 0.371322898772084 -0.309435748976737 -0.259152439768017 -0.742645797544168 -1.05981744024532 -1.17972379297381 -1.17198789924939 -1.70963251309647 -1.9726528997267 -0.58405997619359 -0.359719058185456 1.86048244072263 0.723306063233122 0.166321715074996 0.104434565279649 -0.247548599181389
MMP1403 -0.0232800541793787 0.395760921049437 0.818298187935129 -0.147461869426163 0.368560133265385 0.560754382356654 0.636849526851932 0.656355112127036 -1.49982963105473 -0.972886834667352 -0.624681453813328 0.314280731421612 0.64408149896281 -0.0892402076876182 0.0271600632092751 0.279360650152544 -0.547081273215399 -0.372480866870059 -0.485001128737056 0.919562140085458 1.60632373837713 1.68392391897506 1.18728276314831 0.481121119707159 -0.29488068627213 -0.252200586943269 -0.667361553142189 -1.10580257352049 -1.17564273605862 -0.989402302623594 -1.8585243253204 -2.16892504771211 -0.601401399633949 -0.279360650152544 1.87016435241009 0.845841968517425 0.217280505674201 0.159080370225754 -0.318160740451508
MMP1404 -0.00579804283401062 0.222258308637074 0.772316065699366 -0.0637814359066859 0.342951404186825 0.531394784866466 0.555015659624293 0.535409168052726 -1.48836451835367 -1.08564606144642 -0.709293906693965 0.237719756194435 0.577871602456391 -0.110162813846202 0.00579804283401062 0.257046565641137 -0.608794497571115 -0.206796861079712 -0.767274335034071 0.778870420702093 1.59446177935292 1.67176901713973 1.12675299074273 0.353680612874648 -0.229989032415754 -0.199066137301031 -0.604929135681774 -1.06877256240262 -1.15767588585745 -0.798197230148795 -1.89982536861081 -2.30568836699155 -0.620390583239136 -0.365276698542669 1.83797957838137 0.817524039595497 0.210662222969052 0.125624261403563 -0.392334231768052
MMP1405 0.0456840235168891 0.361665186175373 0.882445012885622 -0.0540839867979612 0.355103091160385 0.526490649438025 0.519557215644882 0.484145142026713 -1.75684315430793 -1.513829233534 -0.654804337075411 0.312174160698743 0.586278301800078 -0.167508086228594 0.0304560156779261 0.19796410190652 -0.689067354713078 -0.236034121503927 -0.84896143702219 0.788049405666338 1.3819417113859 1.46950275645993 1.02027652521052 0.304560156779261 -0.228420117584446 -0.163701084268853 -0.502524258685781 -0.940329484055969 -1.3172226780703 -0.867996446820894 -1.92253598966909 -2.32227119544187 -0.49871725672604 -0.39973520577278 1.7740629132392 0.719523370391004 0.0875610450740375 0.0532980274363707 -0.323595166577965
[+] Show/hide bicluster #3 motif PSSM #1. bicluster 3 motif PSSM #1 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 0 0.333333 0.666667 0
4 0 1 0 0
5 0 0 1 0
6 0 0 0 1
7 0 0 0.666667 0.333333
8 0 1 0 0 [+] Show/hide bicluster #3 motif PSSM #2. bicluster 3 motif PSSM #2 Methanococcus maripaludis S2 8x4
POSITION A C G T
1 0 0 1 0
2 0 0 1 0
3 1 0 0 0
4 0 0 1 0
5 0 0 1 0
6 1 0 0 0
7 1 0 0 0
8 0 0.5 0.5 0 |