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[+] Show/hide bicluster #269 rows and columns.
bicluster 269
Desulfovibrio vulgaris Hildenborough
17x373
[+] Show/hide bicluster #269 rows (genes).
bicluster 269 genes
Desulfovibrio vulgaris Hildenborough
17
[+] Show/hide bicluster #269 rows (short gene names).
bicluster 269 short names
Desulfovibrio vulgaris Hildenborough
17
short_name
[+] Show/hide bicluster #269 rows (long gene names).
bicluster 269 long names
Desulfovibrio vulgaris Hildenborough
17
long_name
[+] Show/hide bicluster #269 rows (NCBI RefSeq gene IDs).
bicluster 269 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #269 gene upstream sequences.
bicluster 269 upstream sequences
Desulfovibrio vulgaris Hildenborough
17
upstream
[+] Show/hide bicluster #269 columns (arrays; conditions).
bicluster 269 arrays
Desulfovibrio vulgaris Hildenborough
373
[+] Show/hide bicluster #269 ratios.
bicluster 269 ratios
Desulfovibrio vulgaris Hildenborough
17x373
GENES X111.1 X111.11 X111.12 X111.2 X111.4 X111.5 X111.6 X111.7 X111.8 X111.9 X113.1 X115.1 X115.2 X115.3 X116.1 X116.13 X116.2 X116.4 X116.5 X116.6 X116.7 X116.8 X116.9 X121.1 X121.11 X121.7 X123.1 X123.11 X123.2 X123.3 X123.7 X123.8 X123.9 X1258.1 X1258.10 X1258.101 X1258.102 X1258.103 X1258.104 X1258.105 X1258.107 X1258.108 X1258.109 X1258.110 X1258.114 X1258.115 X1258.118 X1258.119 X1258.12 X1258.13 X1258.14 X1258.15 X1258.17 X1258.21 X1258.26 X1258.27 X1258.28 X1258.29 X1258.30 X1258.31 X1258.39 X1258.4 X1258.40 X1258.41 X1258.42 X1258.43 X1258.44 X1258.45 X1258.47 X1258.48 X1258.49 X1258.5 X1258.53 X1258.54 X1258.55 X1258.56 X1258.57 X1258.58 X1258.59 X1258.6 X1258.60 X1258.61 X1258.62 X1258.63 X1258.64 X1258.65 X1258.66 X1258.67 X1258.71 X1258.72 X1258.73 X1258.74 X1258.75 X1258.76 X1258.77 X1258.80 X1258.81 X1258.82 X1258.83 X1258.84 X1258.86 X1258.9 X1258.92 X1258.96 X1258.97 X1258.98 X1258.99 X126.10 X126.11 X126.13 X126.14 X126.2 X126.3 X126.4 X126.8 X1271.1 X1271.10 X1271.2 X1271.3 X1271.4 X1271.5 X1271.9 X129.1 X129.2 X129.3 X129.4 X1305.1 X1310.1 X132.1 X132.2 X14.13 X14.2 X14.5 X14.8 X14.9 X1413.10 X1413.11 X1413.12 X1413.15 X1413.16 X1413.2 X1413.3 X1413.4 X1413.9 X1414.10 X1414.6 X1414.9 X1415.1 X1415.2 X1415.4 X1416.2 X1416.3 X1416.5 X1416.6 X1416.7 X1417.1 X1417.10 X1417.11 X1417.13 X1417.14 X1417.2 X1417.3 X1417.4 X1417.5 X1417.6 X1417.7 X15.2 X16.1 X16.10 X16.11 X16.13 X16.14 X16.15 X16.16 X16.18 X16.2 X16.4 X16.5 X16.7 X16.8 X16.9 X1709.12 X1709.13 X1709.14 X1709.15 X1709.3 X1709.4 X1709.5 X1709.6 X1709.7 X1709.8 X1709.9 X1713.1 X1713.2 X1713.3 X1713.4 X1713.5 X1715.4 X1715.5 X1718.3 X1721.1 X1721.12 X1721.14 X1721.17 X1721.18 X1721.19 X1721.2 X1721.4 X1721.6 X1721.9 X1731.1 X1736.10 X1736.17 X1736.19 X1736.21 X1736.5 X175.1 X175.2 X175.3 X175.4 X175.5 X175.6 X175.8 X175.9 X1755.119 X1755.136 X1755.2 X1755.22 X1755.46 X1755.48 X1755.49 X1755.50 X1755.51 X1755.52 X1755.55 X1755.71 X1755.73 X1755.83 X177.1 X177.2 X177.3 X177.5 X177.6 X177.7 X178.3 X193.1 X193.2 X194.1 X195.1 X199.1 X20.2 X22.1 X22.2 X23.1 X23.2 X23.3 X23.4 X23.5 X23.9 X24.10 X24.2 X24.3 X24.4 X24.5 X24.6 X24.7 X24.8 X24.9 X25.2 X27.1 X27.10 X27.11 X27.14 X27.15 X27.16 X27.2 X27.3 X27.5 X27.9 X28.2 X28.3 X3.1 X3.2 X3.3 X3.4 X30.1 X30.2 X30.3 X30.4 X31.1 X31.2 X31.3 X32.1 X32.2 X33.1 X37.1 X37.3 X37.4 X37.6 X37.7 X37.8 X38.1 X38.2 X38.3 X38.5 X38.6 X42.2 X42.4 X426.1 X435.11 X435.2 X435.3 X435.5 X435.6 X435.7 X435.8 X435.9 X449.1 X450.2 X450.3 X450.4 X450.5 X56.2 X56.3 X56.4 X57.1 X57.2 X57.3 X57.4 X59.2 X59.4 X59.6 X59.8 X6.1 X6.10 X6.12 X6.15 X6.16 X6.2 X6.4 X6.5 X6.7 X6.8 X6.9 X60.1 X65.1 X65.3 X71.1 X71.2 X71.3 X71.4 X71.5 X71.6 X71.7 X71.8 X71.9 X72.1 X72.4 X72.5 X72.6 X73.1 X73.3 X74.3 X75.2 X75.3 X86.1 X86.2 X86.3 X86.4 X86.5 X86.6 X86.7 X86.9
DVU0244 0.256027362814397 0.878023081295562 -0.267568004193796 0.594271105374379 0.585068338587746 0.532626511489979 0.141714126165973 0.739024119921296 0.702726641527251 0.56334190760587 -0.144066641524081 -0.127147029436515 -0.320572222595191 -0.0470704091653724 0.248830148486568 0.0589966078493978 0.591038517344024 0.581863637729472 0.682508441768739 0.431128824771243 0.74270522663595 0.7117620852814 0.597352637889297 -0.476345317976 -0.436206381627838 -0.655994480519907 0.0913003936577747 0.358022603161673 -0.47569229336311 0.291080608547441 0.162329020947333 -0.929137711395388 0.155273334017813 0.415098348686851 0.358791824324899 -0.579890387911661 0.0238104161121577 -0.179686229243465 0.392953610123763 -0.904497070931078 0.0586126610289589 0.197240042102766 0.329591631225393 -0.836013148093884 -0.357613358911388 -0.106813795093171 0.453898700775139 -0.56811735343159 0.381889374600743 0.214136647273365 0.70951949185991 -0.45513247574661 -0.333272505546945 -0.797842581308418 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0.382784088038333 1.21272027274618 0.977812678724354 0.477967654211795 -0.841016571551364 -0.462445886624775 0.30116995501314 -0.0754225998405241 -0.0673629747160994 -0.272636497719464 -0.453591709489151 0.0202076258724312 -0.908080572543448 0.0371226598159135 -0.0895830086438045 0.139729024300028 1.23911315718956 0.943262796447366 0.437501043591684 -0.327609085683555 -1.01277366439643 -0.182484242175562 -0.206048902583759 -0.293712228019457 0.359430905351748 -0.330472168683841 -0.681824973659661 -0.507481345604108 0.875366828154874 1.22352422799645 0.837658723639746 NA 0.227977283170120 0.490282164616434 -0.289394364208961 1.0978692784628 1.39263203949385 -0.643370887291375 0.264258261654017 0.572770095700155 -0.87749066870192 -0.0791076572378887 0.455144327794744 1.36347367715246 -0.293110329888715 0.127873490269218 1.16343434395555 -1.07870126312623 1.10138073821396 0.737178918701957 1.23851358298983 0.142660198478811 1.06886429556786 -0.0119830016465290 0.112730523436294 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-0.202402654834206 0.138758085925418 -0.082572870762017 -0.158241691092704 0.643138726583803 1.00629942500479 0.610380595113 1.12833601396097 -0.297456080871292 -0.397868491809887 0.164247890779586 -1.09269829957973 -1.10405535040960 -0.941147786838145 -1.09512913141277 -0.0393616976229633 -1.98839940784691 -0.70642378336585 -2.55041191072038 -2.42375767085384 0.134460440314680 0.360460406787728 1.10109024683812 0.982927650870157 0.166946904250797 1.00552323204855 0.0951499853704154 -0.462445886624775 -1.67498012869387 -0.230148067123502 -1.98401879789923 0.364843340666412 -0.701085713843402 0.059167802829811 -0.249871269577581 0.445523253426901 -0.167872758363876 0.0402463716786036 0.637224322171686 0.46944115134812 0.931617578172665 0.673261520292979 0.255729434859335 2.80748074321544 1.7239200241576 1.16363187809112 0.697862653930175 3.03211191432553 2.73936632540832 1.78359392454830 1.05010087661956 -0.119514078044925 0.063974799504844 -0.574417530390823 0.132713541376925 -1.16160517786015 -1.73268565952187 -2.8266111108697 0.835069864498254 0.800752375321939 -0.754259579208288 -0.682724334959264 0.0676315049439266 0.0139262727543528 0.0200723730878397 0.967024990991134 0.85203456084735 0.824972384274032 0.182667832725093 -0.269617711341728 1.09440662126278 0.974201289939903 NA -0.611391272707825 NA -0.837049621322884 0.220482140887229 -0.123332296688975 0.153040733499652 1.58780738509369 2.28285796630917 0.667637607256703 1.32484064809666 2.16154876775810 0.0721981688080025 -0.123626506354427 -0.8479744209855 -0.270807564017171 -0.894413534292896 0.421363666680983 0.818470025317214 0.339940095998342 1.32888661197937 -0.382920967574629 -1.13766171669786 -0.138909606227056 -1.21085857161669 -0.225535064075152 0.500949007937304 0.256937646589731 0.167214853495872 0.0392877966169494 -0.215151740337102 0.777624613943007 0.017935286134055 0.169678220363001 -0.287544515127608 0.0429098290054117 0.762282021436605 -0.542061438984184 0.924504025361078 -0.45631768056004 -0.107237680108797 0.0980439766530907 -0.201447519190442 -0.0124196682826927 -0.673356569071154 -1.16539086147011 NA 0.646152865099526 -0.728036341728398 -0.788140169355339 NA 0.221168862499716 0.982934622663177 -0.0265503307690870 -1.37714513087193 -0.551213079288669 2.31431469641621 2.85126360338215 -0.212476895748361 0.387083360400775 0.633503708629919 1.30151070472014 0.590731758451136 0.0868870162829023 0.358724430325704 0.87309867149231 0.628653664618883 -0.297286433907801 0.323240327784012 0.272297668578683 0.95115951400822 0.0369785528541865 -0.572642047101684 0.642081337975743 0.740959954449899 0.149292465178905 -0.727276416289198 0.0656120321383922 0.139586799722416 0.134927782840133 0.437772943519471 0.709633364479239 0.755591424068242 -0.269466655826290
DVU0573 0.0403886907145063 -0.299709779981509 -0.120538054828220 0.0236636924404864 -0.111318760639622 -0.408254318989175 -0.333641376093624 0.234946660659116 0.222097426388087 -0.51990144296794 1.88411295329495 1.27068178872704 1.89195419806026 2.48478460035115 0.0291148827372864 -0.192364556669194 0.0272200647802684 -0.121605684264229 0.153675837053796 -0.269114750148821 0.221989766276893 0.223602873609619 -0.509754477487886 -0.158085595208311 -0.468355576063340 -0.720881338545283 -0.510425558847663 -0.427143285498198 0.974655958317079 0.0609571549581594 0.187416515902060 0.0693169625923895 0.586417448334093 -0.273319595225029 0.147984205841996 0.382430246984058 -1.27384520166096 -1.45718498801914 -1.41444751254541 0.106050592531853 0.294735703410818 0.492614987785768 -0.957717434155857 0.477691502039065 -0.421934330451586 -0.310813484983042 -0.183189923483391 1.2346533325159 -0.438962571372136 -0.462735718259003 -0.558748799757182 0.920199679739863 0.618198713158623 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0.0963601766626103 NA 0.83881035696415 1.18426074257700 -0.0309420805363905 1.53059445788408 0.328879873776025 0.493701662450072 0.0968643593400206 0.167128511729042 0.126819233349150 -0.124373711124373 -0.354788549984233 -0.495545424880053 0.481148109516535 0.588093314922788 -0.694314463880456 0.679772665908037 1.13815641055196 0.496287284872864 -0.097494467855236 0 -0.194662103723608 0.316005857046442 0.0854524929174788 -0.102912223313162 0.190907199296272 -0.308934152330039 -0.407877349358977 -1.48594221031608 -0.801293222120056 -1.17341468648496 0.0748068636483014 0.542629225738136 -0.89518637535448 -0.437650353316334 0.402855654284882 0.929053783632504 0.0830421669301308 0.362164284455859 0.486705554321454 0.339326445725736 0.170384506067065 0.240633867819345 -0.174611204416356 -0.0406573376694856 NA NA NA -0.542110594799835 0.251701509561819 0.204470760988713 0.256509836005898 -0.472177588333394 -0.383435137393525 -0.326233719302869 -0.297320078730206 -0.219309741199345 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DVU3393 -0.503694612881 1.51991463606006 0.129234807420324 -0.360641301329352 0.740920328274934 -0.0709562627020259 0.0865825612799934 0.0608389666368382 0.269677296834784 -0.585564862295989 0.213473057707569 NA -0.869476223231758 0.964015820206383 -0.513887183538317 0.132038702075484 -0.369846793673933 0.739883896046561 0.0817030383488118 -0.134939132989629 0.0195261857668906 0.260377044972181 -0.550144544121753 -0.393086565469 -0.0973944248707212 -0.351410144948641 0.300720909770346 -0.0474850013010552 0.323011112228562 0.640281771821573 0.780206045121846 1.12138374144934 1.59510039114120 -0.394306594263543 -0.306030206598893 -0.217408538940449 -0.76920288575411 -0.347130173384615 -0.585288480368423 -0.254142460933275 0.118504081666904 -0.251957661795864 -0.00718415337575867 0.262149837621856 -0.09023100013953 0.356330927753294 -0.310973494789078 0.0556694400973747 -0.448854515981986 -0.0561146143905755 -0.289455187571422 0.144784252080862 -0.354345715850719 0.708427684376274 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[+] Show/hide bicluster #269 motif PSSM #1. bicluster 269 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 23x4
POSITION A C G T
1 0.75 0.25 0 0
2 1 0 0 0
3 1 0 0 0
4 0 0 0 1
5 0 0 1 0
6 0.5 0.25 0.25 0
7 0.5 0 0.5 0
8 0.25 0.5 0 0.25
9 0 0 0 1
10 0.25 0 0 0.75
11 0 0 0 1
12 0 0.5 0.25 0.25
13 0.25 0 0.25 0.5
14 0.25 0.5 0.25 0
15 0.75 0 0.25 0
16 0 0.5 0 0.5
17 0 0.25 0 0.75
18 0.25 0 0.75 0
19 0.75 0 0.25 0
20 0.5 0.5 0 0
21 1 0 0 0
22 0 1 0 0
23 1 0 0 0 [+] Show/hide bicluster #269 motif PSSM #2. bicluster 269 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 24x4
POSITION A C G T
1 0.833333 0 0 0.166667
2 0.5 0.333333 0 0.166667
3 1 0 0 0
4 0.166667 0 0 0.833333
5 0.166667 0.5 0.333333 0
6 1 0 0 0
7 0.333333 0.166667 0 0.5
8 1 0 0 0
9 0.166667 0 0.333333 0.5
10 0.5 0 0 0.5
11 0.333333 0 0.333333 0.333333
12 0.333333 0.333333 0 0.333333
13 0 0.833333 0 0.166667
14 0 0.5 0.5 0
15 0.166667 0 0.5 0.333333
16 0.666667 0.166667 0.166667 0
17 0.166667 0.833333 0 0
18 0.833333 0.166667 0 0
19 0.166667 0.166667 0 0.666667
20 0.166667 0.666667 0.166667 0
21 0.166667 0.333333 0.5 0
22 0.5 0.5 0 0
23 1 0 0 0
24 0.5 0 0 0.5 |