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[+] Show/hide bicluster #105 rows and columns.
bicluster 105
Desulfovibrio vulgaris Hildenborough
32x365
[+] Show/hide bicluster #105 rows (genes).
bicluster 105 genes
Desulfovibrio vulgaris Hildenborough
32
[+] Show/hide bicluster #105 rows (short gene names).
bicluster 105 short names
Desulfovibrio vulgaris Hildenborough
32
short_name
[+] Show/hide bicluster #105 rows (long gene names).
bicluster 105 long names
Desulfovibrio vulgaris Hildenborough
32
long_name
[+] Show/hide bicluster #105 rows (NCBI RefSeq gene IDs).
bicluster 105 NCBI RefSeq IDs
Desulfovibrio vulgaris Hildenborough
0
[+] Show/hide bicluster #105 gene upstream sequences.
bicluster 105 upstream sequences
Desulfovibrio vulgaris Hildenborough
32
upstream
[+] Show/hide bicluster #105 columns (arrays; conditions).
bicluster 105 arrays
Desulfovibrio vulgaris Hildenborough
365
[+] Show/hide bicluster #105 ratios.
bicluster 105 ratios
Desulfovibrio vulgaris Hildenborough
32x365
GENES X111.10 X111.11 X111.2 X111.4 X111.5 X111.6 X111.7 X111.8 X113.1 X115.1 X115.2 X115.3 X116.1 X116.10 X116.11 X116.2 X116.4 X116.5 X116.7 X116.8 X121.1 X121.10 X121.11 X121.12 X121.13 X121.14 X121.15 X121.16 X121.2 X121.4 X121.5 X121.6 X121.8 X123.10 X123.11 X123.13 X123.14 X123.15 X123.16 X123.3 X123.4 X123.6 X123.7 X1258.100 X1258.102 X1258.103 X1258.104 X1258.105 X1258.107 X1258.109 X1258.11 X1258.111 X1258.112 X1258.113 X1258.114 X1258.115 X1258.116 X1258.117 X1258.118 X1258.12 X1258.120 X1258.13 X1258.14 X1258.16 X1258.20 X1258.21 X1258.22 X1258.23 X1258.24 X1258.25 X1258.26 X1258.28 X1258.35 X1258.36 X1258.39 X1258.41 X1258.44 X1258.47 X1258.48 X1258.50 X1258.51 X1258.53 X1258.54 X1258.56 X1258.59 X1258.6 X1258.61 X1258.62 X1258.64 X1258.66 X1258.69 X1258.7 X1258.72 X1258.74 X1258.78 X1258.79 X1258.8 X1258.81 X1258.82 X1258.83 X1258.84 X1258.86 X1258.88 X1258.89 X1258.9 X1258.90 X1258.91 X1258.93 X1258.94 X1258.96 X1258.97 X1258.98 X126.11 X126.13 X126.15 X126.2 X126.4 X126.6 X126.8 X126.9 X1271.3 X1271.4 X129.1 X129.3 X129.4 X1304.1 X1305.1 X1305.3 X132.1 X132.2 X14.1 X14.10 X14.11 X14.3 X14.4 X14.5 X14.6 X14.7 X14.8 X14.9 X1413.10 X1413.11 X1413.12 X1413.13 X1413.15 X1413.16 X1413.3 X1413.6 X1413.8 X1414.11 X1414.2 X1414.4 X1414.7 X1415.1 X1415.4 X1416.1 X1416.3 X1416.5 X1416.7 X1417.1 X1417.10 X1417.11 X1417.12 X1417.3 X1417.5 X1417.7 X15.2 X16.1 X16.10 X16.11 X16.13 X16.14 X16.16 X16.17 X16.18 X16.2 X16.3 X16.4 X16.6 X16.7 X16.8 X16.9 X1709.10 X1709.12 X1709.15 X1713.3 X1713.4 X1715.4 X1715.5 X1719.1 X1721.10 X1721.12 X1721.13 X1721.14 X1721.15 X1721.16 X1721.17 X1721.18 X1721.2 X1721.4 X1721.5 X1721.7 X1721.9 X1731.1 X1736.17 X1736.21 X1737.1 X175.1 X175.3 X175.4 X175.6 X175.8 X175.9 X1754.1 X1755.10 X1755.102 X1755.105 X1755.107 X1755.108 X1755.109 X1755.116 X1755.117 X1755.118 X1755.119 X1755.120 X1755.121 X1755.17 X1755.2 X1755.23 X1755.25 X1755.27 X1755.50 X1755.52 X1755.6 X1755.62 X1755.64 X1755.73 X1755.8 X1755.83 X1755.85 X1755.92 X1755.94 X1755.97 X177.1 X177.2 X177.3 X177.4 X177.5 X177.6 X177.7 X177.8 X178.6 X179.1 X195.1 X199.1 X20.2 X20.3 X22.1 X23.1 X23.3 X23.4 X23.8 X23.9 X24.1 X24.5 X25.3 X26.1 X27.1 X27.10 X27.11 X27.12 X27.13 X27.2 X27.3 X27.4 X27.5 X27.6 X27.7 X27.9 X28.1 X28.2 X28.3 X3.1 X3.2 X3.3 X3.4 X30.2 X30.4 X32.1 X33.1 X33.2 X33.3 X33.4 X33.5 X37.2 X37.4 X37.6 X37.8 X38.1 X38.4 X38.7 X380.1 X386.1 X389.1 X41.1 X41.3 X41.4 X41.5 X42.1 X426.1 X435.1 X450.1 X450.2 X450.3 X450.4 X450.5 X451.1 X451.2 X56.2 X56.3 X56.4 X57.1 X57.2 X57.3 X57.4 X59.1 X59.3 X59.5 X59.7 X6.12 X6.13 X6.14 X6.15 X6.16 X6.3 X6.4 X6.6 X6.7 X6.9 X65.1 X65.2 X65.4 X71.2 X71.3 X71.4 X71.5 X71.6 X71.7 X71.8 X72.1 X72.2 X72.3 X72.4 X72.5 X72.6 X72.7 X72.8 X72.9 X86.1 X86.10 X86.3 X86.4 X86.7 X86.8 X86.9
DVU0118 0.32999022244598 0.322387069537811 0.780896650018518 0.600899981903236 0.498700163944666 0.147788696628646 0.417729511940764 0.510947904921892 1.05133439849315 0.837866487577762 1.53738865187608 0.756508786568106 0.416636334504998 0.328332519874991 0.331192906429715 0.771488527112781 0.645980806832051 0.864614405941314 0.427379304469607 0.515418792949343 -0.170310455219020 3.29926971086264 -0.0123449941200866 1.49682213998512 0.313919192509469 1.01770644804681 1.65025025391025 2.89638001653086 1.30116225942232 1.14878012183469 1.07303746347437 2.11724092772681 1.77127009376815 -0.505758087526582 -0.11475419615055 -0.576087723938123 -1.34618685840288 -1.46903054869766 -1.33371255215399 0.0916482767680756 -0.615055062619943 -0.480439418418427 0.820020696346571 -1.61742324946012 -1.64884596459561 -1.21959162481818 -1.69249754026903 -1.40539213997585 0.0629702110943623 0.151004224246700 0.097097926769103 0.325077532138790 -0.211986004114766 -0.0653776936710357 0.00835072579049831 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-0.0600596403319649 0.374816161444176 0.0282985499632413 NA -1.15418600697741 1.03009956840669 NA -1.80008961169314 NA NA NA -0.0733648747146702 1.16170189449511 -0.188472305004179 1.16025565284434 -0.630684290276714 -0.452018693132442 0.635555028247769 -1.27689564615312 2.08421903938217 1.15253355316855 -0.218350600204519 -0.841922421310165 -0.691375462422996 -0.411656089985975 -1.83518834836134 -1.96421915861641 -1.14229510630305 -0.896794642062612 -1.65569578797551 -1.63793684676512 0.346355787235650 0.362292766053095 0.346369003543164 0.35492373059231 NA -0.871957424156737 -0.15218504468172 1.29602677993133 1.68646293649745 -0.0511210739517459 -0.169026396541880 0.610844309285238 0.471172483437813 0.0891806033508976 0.506677149551076 1.76241327969013 0.456591120162476 1.36915827353575 1.16296310784069 -0.984239396704236 2.00605402065901 0.829121068091635 -0.984239396704236 -1.03226557016465 -1.63968517544477 -0.701012038644325 2.21817575625194 -0.662899983863027 -0.545004856710117 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DVU0254 1.14513253322880 0.104771884679170 0.821948892469857 0.259990748870298 -0.374067068760659 -0.062725892004613 0.0667087269449972 0.473517514816612 0.0495433694905791 -0.320034907376759 0.290461319358647 0.570932817729602 -0.496151410200053 1.14670536426781 0.112067040361606 0.817704026788032 0.249570945296404 -0.0988083818332488 0.0263938182988735 0.478783993259638 -0.505716098029207 1.03387534728707 -0.254660257982108 -0.273371774623375 0.945956840215943 -0.334202671944514 0.137279214786369 0.741466174483416 -0.479894512194677 0.372832081182245 -0.364849923247419 -0.341033414104335 -0.116989694383260 -0.126210234495864 -0.14683097080842 0.479007066932178 0.841783051615324 0.792281710497832 -0.221324160687144 -0.241632593858143 0.271393369784081 1.65171829528574 0.598868754025605 -0.635362313672554 -0.00792396480285879 -0.520770337973929 -0.741576094843798 0.493177094566177 -0.778704929514721 -0.255443925492599 0.69764674611216 0.224725710898212 0.789018045680008 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1.93075155707643 -0.65837443741759 0.876169954385204 1.08927871633703 0.555554202247173 -0.28592892584871 -0.118128973800515 -0.877202969573765 -0.0414379657051946 -1.13636822649838 -1.72996721278851 -0.999227477228276 -0.984051568945082 -1.56491275043841 -1.66681724628417 -0.804596864990572 0.113344982691253 -0.663507828302429 -0.0387264242834997 -0.833329451646592 1.88314167127476 0.424904774917615 0.755423136405838 0.346692061051382 0.297166669472645 0.0630496853533555 0.130317680657706 0.344424727682607 0.264917864370857 0.653078341702622 1.41411228463295 -1.16954906609750 0.466605603155654 -0.388921824010332 -1.10708218006359 -0.0490740646751303 0.34924744040167 NA 0.93488195530294 -0.00452981110528894 -0.419777721044370 NA NA 0.094009896182127 0.595576133907244 0.00740058023062215 -0.511370170751927 -0.12745487394629 0.638980548378809 0.0597904450725248 0.418067797799251 0.490589546059286 1.31491130607082 0.545641305540499 -0.129905939501844 0.169739859434839 -0.458024054975537 -0.602830942296508 0.316144784711823 0.411992085060602 -0.495920618786295 0.43952310847945 0.280083485297569 0.863639954189346 NA NA -0.532331688320960 NA -0.0738441673611662 0.526006856957727 0.377969739701207 0.0391101838297282 -0.627755149582654 -1.08320316819609 -0.752760933145834 -0.985886833341585 0.132874294490772 -0.682973564238885 -0.883249877714262 0.0822567971478378 0.451322706365040 0.577756375008011 -0.0310701620948579 -1.11775016873609 -0.912231418397162 -1.00807871874594 0.0741538579407197 -0.206454982077705 0.198430267929281 0.366069325722087 -0.011243545692991 0.514583776319401 0.667692560321864 0.0153663869183553 -2.38624706212739 0.306334761569976 -0.54056980339226 -0.310585661866307 -0.671811782455218 -0.897269487128807 -0.238609143499852 -0.67817554117538 0.13832206698972 -0.537818964268801 -0.781732186472251 -1.24635241212561 -1.35255085056722 NA -0.937828418797273 0.78597452768799 NA NA NA NA 0.744644044283325 NA -1.15545950265887 0.529070431718258 0.412230751730999 -0.172301575796721 -0.282091741880684 -0.0230670102456215 -0.971801384845551 0.300845428150838 0.0425426631937266 0.0988492744186916 -0.417973318717314 -0.0454095025488835 -0.496679825694714 -0.360596616671025 -0.546431539116069 -1.01633329358761 -0.301641834140298 -0.412568341621334 0.0633329991508875 -0.26945269570611 0.497152879495212 -1.45559312803996 -0.239656396389785 0.45385956847366 -1.24237943505201 -1.03190217888844 -1.64568290112622
[+] Show/hide bicluster #105 motif PSSM #1. bicluster 105 motif PSSM #1 Desulfovibrio vulgaris Hildenborough 24x4
POSITION A C G T
1 0.367242 0.049424 0.049424 0.533909
2 0 0.5 0.5 0
3 0 0.166667 0.833333 0
4 0.333333 0 0 0.666667
5 0 1 0 0
6 0 0 1 0
7 0.666667 0 0 0.333333
8 0 0.666667 0 0.333333
9 0.5 0 0 0.5
10 0.333333 0 0 0.666667
11 0 0.666667 0.333333 0
12 0 0.833333 0.166667 0
13 0 0.833333 0 0.166667
14 0 1 0 0
15 0 1 0 0
16 0.166667 0 0 0.833333
17 0 0.5 0.333333 0.166667
18 0 1 0 0
19 0 0.166667 0.833333 0
20 0.333333 0.166667 0.5 0
21 0 0.166667 0.333333 0.5
22 0 0 0.333333 0.666667
23 0 1 0 0
24 0 0.166667 0.166667 0.666667 [+] Show/hide bicluster #105 motif PSSM #2. bicluster 105 motif PSSM #2 Desulfovibrio vulgaris Hildenborough 19x4
POSITION A C G T
1 0.055556 0 0.944444 0
2 0 0.833333 0 0.166667
3 0 0.722222 0 0.277778
4 0.222222 0 0.555556 0.222222
5 0.111111 0.444444 0.166667 0.277778
6 0.722222 0.222222 0 0.055556
7 0.5 0.055556 0.166667 0.277778
8 0.166667 0.277778 0.222222 0.333333
9 0.333333 0.5 0.166667 0
10 0 0.388889 0.611111 0
11 0 0.777778 0.222222 0
12 0 0.944444 0 0.055556
13 0 0.055556 0.222222 0.722222
14 0 0 0.333333 0.666667
15 0 0.777778 0 0.222222
16 0.333333 0.388889 0.277778 0
17 0.166667 0 0.277778 0.555556
18 0 0.666667 0.277778 0.055556
19 0.777778 0.222222 0 0 |