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| May 16, 2013 | Recent Publication: A role for programmed cell death in the microbial loop |
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| January 23, 2013 | Publication: Effects of H2 and formate on growth yield and regulation of methanogenesis in Methanococcus maripaludis. |
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| January 23, 2013 | Publication: Metallochaperones Regulate Intracellular Copper Levels |
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| June 22, 2012 | Nitin Baliga received an Award from NWABR |
Nitin Baliga received the 2012 Alvin J. Thompson Award from NWABR for his contributions to high school science education. He and two other award recipients were honored at an event on June 12.
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| April 06, 2012 | Mapping transcription factor binding sites |
The Marc Facciotti lab at UC Davis published A workflow for genome-wide mapping of archaeal transcription factors with ChIP-seq. This paper demonstrates a novel ChIP-seq workflow for mapping genome-wide binding sites of natively expressed transcription factors in archaea. Gaggle software features prominently. |
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| February 29, 2012 | Systems Bioinformatics Workshop 2012 |
The Systems Bioinformatics Workshop 2012 will be held at ISB on September 10th and 11th. Presentations and tutorials will cover the following topics:
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| February 07, 2012 | Strange organisms shed light on how living things evolve |
Seattle Local Health Guide Blog published an interview about our recent paper "Niche adaptation by expansion and... |
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| January 07, 2012 | Genome Browser 1.0 Build 186 released |
This release includes contributions from Diego Martinez Salvanha of the Vêncio lab at the University of Sao Paulo, Ribeirão Preto, Brazil and Kai Chen of Genomatica. Thanks to them! |
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| November 23, 2011 | Niche adaptation by expansion and reprogramming of general transcription factors |
Experimental analysis of TFB family proteins in a halophilic archaeon reveals complex environment-dependent fitness contributions. Gene conversion events among these proteins can generate novel niche adaptation capabilities, a process that may have contributed to archaeal adaptation to extreme environments. |
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| July 15, 2011 | GaggleBridge: collaborative data analysis |
Florian Battke, Stephan Symons, Alexander Herbig and Kay Nieselt at the University of Tuebingen published a paper on their GaggleBridge software. GaggleBridge transparently extends Gaggle to allow data exchange between users at different geographic locations using network communication. GaggleBridge can automatically set up SSH tunnels to traverse firewalls while adding security features. GaggleBridge is available as open-source software at http://it.inf.uni-tuebingen.de/gb. |
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Our researchers discover that programmed cell death of algae may play an important role in driving the global carbon cycle
This model accurately recapitulates known dynamical properties of the Cu circuit and predicts that intracellular Cu-buffering emerges as a consequence of the interplay of paralogous metallochaperones that traffic and allocate Cu to distinct targets.
