VNG00031 one-of-top-five-correct: 0.441712866319815 CThresh: 5.681097 75 best_is: cluster02 VNG00031 cluster00 -> 1e0cA1 7.3933143 144 / 92 conP: 0.245 CATH-ID: 3.40.250.10 Sulfurtransferase. Chain: a. Synonym: rhodanese. Engineered: yes VNG00031 cluster01 -> 1pfkA2 8.3627504 126 / 92 conP: 0.330 CATH-ID: 3.40.50.460 Phosphofructokinase (r-state) complex with fructose-1,6-bisphosphate a VNG00031 cluster02 -> 1bvyF0 9.1382993 152 / 92 conP: 0.336 CATH-ID: 3.40.50.360 Cytochrome p450 bm-3. Chain: a, b. Fragment: heme-binding domain. Engi VNG00031 cluster03 -> 1a6f00 6.5761849 113 / 92 conP: 0.245 CATH-ID: 3.30.230.10 Ribonuclease p protein. Chain: null. Synonym: rnase p protein. Enginee VNG00031 cluster04 -> 1scuA2 8.3627504 166 / 92 conP: 0.266 CATH-ID: 3.40.50.261 Succinyl-coa synthetase (succinate-coa ligase) (adp-forming) --end-- VNG00032 one-of-top-five-correct: 0.548372407417155 CThresh: 8.264111 25 best_is: cluster11 VNG00032 cluster00 -> 1quuA2 6.9486774 122 / 128 conP: 0.238 CATH-ID: 1.20.1040.10 Human skeletal muscle alpha-actinin 2. Chain: a. Fragment: spectrin-li VNG00032 cluster01 -> 1joyA0 8.5905865 67 / 128 conP: 0.404 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG00032 cluster02 -> 1hwxA1 7.2132319 51 / 128 conP: 0.332 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG00032 cluster03 -> 1bf202 5.4292091 474 / 128 conP: 0.029 CATH-ID: 3.20.20.80 Isoamylase. Chain: null. Synonym: glycogen 6-glucanohydrolase. Ec: 3.2 VNG00032 cluster04 -> 1fewA0 8.2164582 173 / 128 conP: 0.254 CATH-ID: 1.20.1040.20 Second mitochondria-derived activator of caspases. Chain: a. Fragment: VNG00032 cluster11 -> 1qsdA0 10.662514 102 / 128 conP: 0.504 CATH-ID: 1.20.1040.50 Beta-tubulin binding post-chaperonin cofactor. Chain: a, b. Fragment: --end-- VNG00131 one-of-top-five-correct: 0.209460960314718 CThresh: 7.586021 25 best_is: cluster18 VNG00131 cluster00 -> 1aoa01 6.3304629 118 / 109 conP: 0.196 CATH-ID: 1.10.418.10 T-fimbrin. Chain: null. Fragment: abd1 VNG00131 cluster01 -> 1geo03 6.3518103 146 / 109 conP: 0.170 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG00131 cluster02 -> 3ecaA1 5.7358896 212 / 109 conP: 0.101 CATH-ID: 3.40.50.1170 Asparaginase type ii (eca) VNG00131 cluster03 -> 1fokA3 5.9188344 178 / 109 conP: 0.129 CATH-ID: 3.40.91.30 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG00131 cluster04 -> 1deoA0 5.6153312 233 / 109 conP: 0.087 CATH-ID: 3.40.50.1110 Rhamnogalacturonan acetylesterase. Chain: a. Engineered: yes VNG00131 cluster18 -> 1nal10 6.6203106 291 / 109 conP: 0.080 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 --end-- VNG0015h one-of-top-five-correct: 1 CThresh: best_is: --end-- VNG0016h one-of-top-five-correct: 1 CThresh: best_is: --end-- VNG0017h one-of-top-five-correct: 0.404821816274536 CThresh: 6.440728 75 best_is: cluster07 VNG0017h cluster00 -> 1kdxA0 6.0749720 81 / 97 conP: 0.244 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG0017h cluster01 -> 1ckmA1 5.5208352 155 / 97 conP: 0.139 CATH-ID: 3.90.63.10 mRNA capping enzyme. Chain: a, b. Synonym: RNA guanylyltransferase. En VNG0017h cluster02 -> 1ii9A 8.7642388 544 / 97 conP: 0.024 NO-CATH VNG0017h cluster03 -> 1cr4A0 6.6655659 243 / 97 conP: 0.106 CATH-ID: 3.40.50.300 DNA primase/helicase. Chain: a. Fragment: helicase domain. Engineered: VNG0017h cluster04 -> 1ei1A2 7.0731521 173 / 97 conP: 0.181 CATH-ID: 3.30.970.10 DNA gyrase b. Chain: a, b. Fragment: n-terminal 43 kda fragment. Synon VNG0017h cluster07 -> 1f89A 8.9550273 271 / 97 conP: 0.158 NO-CATH --end-- VNG0018h one-of-top-five-correct: 0.463615649190424 CThresh: 5.806777 75 best_is: cluster09 VNG0018h cluster00 -> 1cii03 6.4466854 157 / 86 conP: 0.161 CATH-ID: 1.10.490.30 Colicin ia. Chain: null. Engineered: yes. Biological_unit: monomer VNG0018h cluster01 -> 1gln04 6.5165790 48 / 86 conP: 0.322 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG0018h cluster02 -> 1cf9A2 6.4075213 121 / 86 conP: 0.203 CATH-ID: 1.10.422.10 Catalase hpii. Chain: a, b, c, d. Engineered: yes. Mutation: yes VNG0018h cluster03 -> 1e5rA 6.7134951 260 / 86 conP: 0.082 NO-CATH VNG0018h cluster04 -> 2bct00 6.1604880 502 / 86 conP: 0.011 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG0018h cluster09 -> 1cf9A2 9.5739693 121 / 86 conP: 0.388 CATH-ID: 1.10.422.10 Catalase hpii. Chain: a, b, c, d. Engineered: yes. Mutation: yes --end-- VNG00212 one-of-top-five-correct: 0.505361213886948 CThresh: 4.565367 75 best_is: cluster18 VNG00212 cluster00 -> 1he8A3 7.5068212 111 / 92 conP: 0.357 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony VNG00212 cluster01 -> 1fjgB2 6.0362253 62 / 92 conP: 0.345 CATH-TRUNC VNG00212 cluster02 -> 1he8A3 7.4146722 111 / 92 conP: 0.351 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony VNG00212 cluster03 -> 1fts01 6.6534932 84 / 92 conP: 0.347 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG00212 cluster04 -> 1elrA0 6.9491676 128 / 92 conP: 0.293 CATH-ID: 1.25.40.10 Tpr2a-domain of hop. Chain: a. Fragment: middle domain. Engineered: ye VNG00212 cluster18 -> 1elkA0 9.3321865 153 / 92 conP: 0.405 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu --end-- VNG0024h one-of-top-five-correct: 0.508472001365899 CThresh: 6.970968 42 best_is: cluster17 VNG0024h cluster00 -> 1hstA0 5.9877353 74 / 105 conP: 0.244 CATH-ID: 1.10.10.10 Histone h5 (globular domain) VNG0024h cluster01 -> 1e7aA3 7.8857519 92 / 105 conP: 0.331 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG0024h cluster02 -> 1cpq00 5.2615466 129 / 105 conP: 0.153 CATH-ID: 1.20.120.10 Cytochrome c'. Chain: null VNG0024h cluster03 -> 1c17M0 5.4557231 142 / 105 conP: 0.150 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG0024h cluster04 -> 1ggqA0 7.0098632 162 / 105 conP: 0.194 CATH-ID: 1.20.120.240 Outer surface protein c. Chain: a, b, c, d. Fragment: residues 38-210. VNG0024h cluster17 -> 1j8mF1 10.161207 87 / 105 conP: 0.496 CATH-ID: 1.20.120.140 Signal recognition 54 kda protein. Chain: f. Fragment: g-domain, gtpas --end-- VNG0025h one-of-top-five-correct: 0.418138500898529 CThresh: 6.048481 75 best_is: cluster12 VNG0025h cluster00 -> 2occC2 7.5949393 191 / 86 conP: 0.161 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG0025h cluster01 -> 2occA0 7.4980313 514 / 86 conP: 0.013 CATH-ID: 1.20.210.10 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG0025h cluster02 -> 1rlr03 7.1991333 299 / 86 conP: 0.066 CATH-ID: 3.90.244.10 Ribonucleotide reductase protein r1. Chain: null. Synonym: ribonucleos VNG0025h cluster03 -> 1azsA0 7.3970363 190 / 86 conP: 0.155 CATH-ID: 3.50.6.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG0025h cluster04 -> 1ekjA0 6.2096183 210 / 86 conP: 0.099 CATH-ID: 3.40.1050.10 Beta-carbonic anhydrase. Chain: a, b, c, d, e, f, g, h. Ec: 4.2.1.1 VNG0025h cluster12 -> 1a0b00 9.1781633 117 / 86 conP: 0.356 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment --end-- VNG00260 one-of-top-five-correct: 0.224279541156127 CThresh: 7.395506 25 best_is: cluster17 VNG00260 cluster00 -> 1d5aA3 4.6089956 163 / 104 conP: 0.097 CATH-ID: 3.30.70.510 DNA polymerase. Chain: a. Engineered: yes VNG00260 cluster01 -> 1mdl01 4.6753983 126 / 104 conP: 0.123 CATH-ID: 3.30.390.10 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r VNG00260 cluster02 -> 1dfmA0 5.4124965 218 / 104 conP: 0.085 CATH-ID: 3.40.91.20 Endonuclease bglii. Chain: a, b. Fragment: bglii. Engineered: yes. Mut VNG00260 cluster03 -> 1qlmA2 5.1067499 198 / 104 conP: 0.089 CATH-ID: 3.30.1030.10 Methenyltetrahydromethanopterin cyclohydrolase. Chain: a. Engineered: VNG00260 cluster04 -> 1mml02 4.8596728 146 / 104 conP: 0.114 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes VNG00260 cluster17 -> 1icxA 6.8866928 155 / 104 conP: 0.179 NO-CATH --end-- VNG00261 one-of-top-five-correct: 0.151505506222591 CThresh: 8.588316 25 best_is: cluster02 VNG00261 cluster00 -> 1qpg01 4.9359536 186 / 120 conP: 0.092 CATH-ID: 3.40.50.1260 3-phosphoglycerate kinase. Chain: null. Synonym: pgk. Engineered: yes. VNG00261 cluster01 -> 2dri02 4.7623713 146 / 120 conP: 0.108 CATH-ID: 3.40.50.2400 D-ribose-binding protein complexed with beta-d-ribose VNG00261 cluster02 -> 1grkA 5.7439705 412 / 120 conP: 0.033 NO-CATH VNG00261 cluster03 -> 1mat00 5.1536138 263 / 120 conP: 0.064 CATH-ID: 3.90.230.10 Methionine aminopeptidase VNG00261 cluster04 -> 1fokA3 5.2207944 178 / 120 conP: 0.103 CATH-ID: 3.40.91.30 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: --end-- VNG0030h one-of-top-five-correct: 0.182865828412923 CThresh: 9.535950 25 best_is: cluster18 VNG0030h cluster00 -> 1fna00 5.6749166 91 / 130 conP: 0.164 CATH-ID: 2.60.40.30 Fibronectin cell-adhesion module type iii-10 VNG0030h cluster01 -> 1csn01 5.7319448 82 / 130 conP: 0.173 CATH-ID: 3.30.200.20 Casein kinase-1. Heterogen: mg-atp VNG0030h cluster02 -> 1cb8A3 5.7566277 110 / 130 conP: 0.154 CATH-ID: 2.60.220.10 Chondroitinase ac. Chain: a. Ec: 4.2.2.5 VNG0030h cluster03 -> 1e8mA2 6.1372713 353 / 130 conP: 0.052 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG0030h cluster04 -> 1ospO2 5.9364206 76 / 130 conP: 0.187 CATH-ID: 2.20.50.10 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG0030h cluster18 -> 1howA1 6.5641453 91 / 130 conP: 0.202 CATH-ID: 3.30.200.20 Serine/threonine-protein kinase ymr216c. Chain: a. Fragment: sky1pdelt --end-- VNG0032h one-of-top-five-correct: 0.160360769998173 CThresh: 9.805534 25 best_is: cluster18 VNG0032h cluster00 -> 1rypA0 4.6468366 243 / 126 conP: 0.054 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG0032h cluster01 -> 1apyB0 6.2224337 141 / 126 conP: 0.136 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG0032h cluster02 -> 1fi8C 4.4717721 78 / 126 conP: 0.119 NO-CATH VNG0032h cluster03 -> 1gxpA 4.6335618 103 / 126 conP: 0.109 NO-CATH VNG0032h cluster04 -> 1a0i01 4.3921619 230 / 126 conP: 0.053 CATH-ID: 3.90.410.10 DNA ligase. Chain: null. Engineered: yes. Mutation: m2v VNG0032h cluster18 -> 1qckA0 6.3435945 89 / 126 conP: 0.178 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes --end-- VNG00350 one-of-top-five-correct: 0.505991718739041 CThresh: 5.678778 75 best_is: cluster07 VNG00350 cluster00 -> 1kiyA 7.8140213 354 / 103 conP: 0.096 NO-CATH VNG00350 cluster01 -> 1ithA0 8.9379983 141 / 103 conP: 0.385 CATH-ID: 1.10.490.10 Hemoglobin (cyanomet) VNG00350 cluster02 -> 1flp00 7.2819594 142 / 103 conP: 0.279 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG00350 cluster03 -> 1hbg00 6.2444155 147 / 103 conP: 0.217 CATH-ID: 1.10.490.10 Hemoglobin (carbon monoxy) VNG00350 cluster04 -> 1hbg00 7.2402890 147 / 103 conP: 0.269 CATH-ID: 1.10.490.10 Hemoglobin (carbon monoxy) VNG00350 cluster07 -> 1dlwA0 9.5935607 116 / 103 conP: 0.473 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a. Engineered: yes --end-- VNG0037h one-of-top-five-correct: 0.251612217979915 CThresh: 6.405350 75 best_is: cluster01 VNG0037h cluster00 -> 1kmjA 5.9636418 404 / 81 conP: 0.015 NO-CATH VNG0037h cluster01 -> 1ljwA 7.3743731 141 / 81 conP: 0.184 NO-CATH VNG0037h cluster02 -> 1cvl00 5.3590426 316 / 81 conP: 0.027 CATH-ID: 3.40.50.950 Triacylglycerol hydrolase. Chain: null. Other_details: chain break fro VNG0037h cluster03 -> 1bs2A2 5.1921525 125 / 81 conP: 0.121 CATH-ID: 1.20.1010.10 Arginyl-tRNA synthetase. Chain: a. Synonym: argrs, arginine - tRNA lig VNG0037h cluster04 -> 1fit00 6.3667079 124 / 81 conP: 0.163 CATH-ID: 3.30.428.10 Fragile histidine protein. Chain: null. Synonym: fhit, fragile histidi --end-- VNG0038h one-of-top-five-correct: 0.184388579606197 CThresh: 6.096533 75 best_is: cluster04 VNG0038h cluster00 -> 1doqA0 5.9943100 69 / 83 conP: 0.237 CATH-ID: 1.10.359.10 RNA polymerase alpha subunit. Chain: a. Fragment: c-terminal domain. E VNG0038h cluster01 -> 1eemA2 5.2541235 115 / 83 conP: 0.145 CATH-ID: 1.20.1050.10 Glutathione-s-transferase. Chain: a. Engineered: yes VNG0038h cluster02 -> 1qhaA2 5.3921504 261 / 83 conP: 0.049 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG0038h cluster03 -> 1sbp01 5.6182475 151 / 83 conP: 0.122 CATH-ID: 3.40.190.10 Sulfate-binding protein VNG0038h cluster04 -> 2azoA 6.1023505 218 / 83 conP: 0.083 NO-CATH --end-- VNG0039h one-of-top-five-correct: 0.50280251242925 CThresh: 6.924337 75 best_is: cluster04 VNG0039h cluster00 -> 1bi2B1 9.3581913 73 / 110 conP: 0.478 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG0039h cluster01 -> 1bia01 8.5992039 64 / 110 conP: 0.438 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0039h cluster02 -> 1bjaA0 9.2769042 95 / 110 conP: 0.438 CATH-ID: 1.10.10.10 Transcription regulatory protein mota. Chain: a, b. Fragment: n-termin VNG0039h cluster03 -> 1ecl02 6.3277160 166 / 110 conP: 0.175 CATH-ID: 1.10.460.10 Escherichia coli topoisomerase i. Domain: amino-terminal 67kda. Synony VNG0039h cluster04 -> 1bi2B1 9.9641165 73 / 110 conP: 0.522 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye --end-- VNG0041c one-of-top-five-correct: 0.181290807465895 CThresh: 7.485339 25 best_is: cluster01 VNG0041c cluster00 -> 1b3jA1 4.2379799 170 / 100 conP: 0.077 CATH-ID: 3.30.500.10 Mhc class i homolog mic-a. Chain: a. Fragment: extracellular domain, r VNG0041c cluster01 -> 1sfe01 6.2883315 81 / 100 conP: 0.219 CATH-ID: 3.30.160.70 Ada o6-methylguanine-DNA methyltransferase. Chain: null. Fragment: c-t VNG0041c cluster02 -> 1bbpA0 4.6922882 173 / 100 conP: 0.085 CATH-ID: 2.40.128.20 Bilin binding protein ( BBP ) VNG0041c cluster03 -> 1hocA1 4.5089882 181 / 100 conP: 0.077 CATH-ID: 3.30.500.10 Murine class i major histocompatibility complex consisting of h-2d==b= VNG0041c cluster04 -> 1b34B0 5.3663613 74 / 100 conP: 0.185 CATH-ID: 2.30.30.140 Small nuclear ribonucleoprotein sm d1. Chain: a. Small nuclear ribonuc --end-- VNG00421 one-of-top-five-correct: 0.228932577769391 CThresh: 7.393545 25 best_is: cluster16 VNG00421 cluster00 -> 1tlfA1 6.5080634 131 / 105 conP: 0.189 CATH-ID: 3.40.50.2300 Tryptic core fragment of the lactose repressor of escherichia coli VNG00421 cluster01 -> 1cfe00 5.4884711 135 / 105 conP: 0.145 CATH-ID: 3.40.33.10 Pathogenesis-related protein p14a. Chain: null. Fragment: residues 1 - VNG00421 cluster02 -> 1gtxA1 6.4511627 167 / 105 conP: 0.153 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG00421 cluster03 -> 1pxtA2 5.7062288 156 / 105 conP: 0.135 CATH-ID: 3.40.47.20 Peroxisomal 3-ketoacyl-coa thiolase VNG00421 cluster04 -> 1mbe00 6.3921978 52 / 105 conP: 0.276 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG00421 cluster16 -> 1efuA1 6.9357173 172 / 105 conP: 0.167 CATH-ID: 3.40.50.300 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran --end-- VNG0043h one-of-top-five-correct: 0.536834970333865 CThresh: 6.210790 75 best_is: cluster04 VNG0043h cluster00 -> 1g71A 8.7161114 344 / 129 conP: 0.201 NO-CATH VNG0043h cluster01 -> 1f5aA1 8.4011851 103 / 129 conP: 0.459 CATH-ID: 3.30.70.590 Poly(a) polymerase. Chain: a. Fragment: c-terminal deletion mutant mis VNG0043h cluster02 -> 1fjgC1 7.5293592 91 / 129 conP: 0.413 CATH-TRUNC VNG0043h cluster03 -> 1g71A 8.5412408 344 / 129 conP: 0.193 NO-CATH VNG0043h cluster04 -> 1qf6A2 9.5812735 106 / 129 conP: 0.539 CATH-ID: 3.30.980.10 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch --end-- VNG00440 one-of-top-five-correct: 0.425776925362285 CThresh: 6.971868 53 best_is: cluster16 VNG00440 cluster00 -> 1cuk02 7.6584133 76 / 103 conP: 0.335 CATH-ID: 1.10.150.30 Ruva protein. Chain: null. Engineered: yes VNG00440 cluster01 -> 2end00 7.4879299 137 / 103 conP: 0.240 CATH-ID: 1.10.440.10 Endonuclease v VNG00440 cluster02 -> 1fbaA0 5.4832642 360 / 103 conP: 0.038 CATH-ID: 3.20.20.70 Fructose-1,6-bisphosphate aldolase VNG00440 cluster03 -> 1cf7A0 6.9764854 67 / 103 conP: 0.305 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG00440 cluster04 -> 1bi2B1 6.8541389 73 / 103 conP: 0.289 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG00440 cluster16 -> 1a0p01 9.2955653 91 / 103 conP: 0.422 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes --end-- VNG00490 one-of-top-five-correct: 0.40881767334497 CThresh: 2.491415 100 best_is: cluster03 VNG00490 cluster00 -> 1gdj00 5.9113534 153 / 54 conP: 0.121 CATH-ID: 1.10.490.10 Leghemoglobin (deoxy) VNG00490 cluster01 -> 2bct00 5.6836457 502 / 54 conP: 0.001 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG00490 cluster02 -> 1pdnC1 5.8610214 68 / 54 conP: 0.291 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b VNG00490 cluster03 -> 1k62A 8.1884300 450 / 54 conP: 0.006 NO-CATH VNG00490 cluster04 -> 1vhbA0 6.1390610 135 / 54 conP: 0.157 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a, b. Synonym: soluble cytochrome o. Engineered: ye --end-- VNG00492 one-of-top-five-correct: 0.434769723176852 CThresh: 6.062153 75 best_is: cluster12 VNG00492 cluster00 -> 1dbqA1 7.7659720 134 / 99 conP: 0.287 CATH-ID: 3.40.50.2200 Purine repressor. Chain: a, b. Fragment: corepressor-free corepressor- VNG00492 cluster01 -> 1pymA0 7.1786702 284 / 99 conP: 0.105 CATH-ID: 3.20.20.270 Phosphoenolpyruvate mutase. Chain: a, b. Synonym: phosphoenolpyruvate VNG00492 cluster02 -> 3crd00 7.1545369 100 / 99 conP: 0.301 CATH-ID: 1.10.533.10 Raidd. Chain: null. Fragment: card domain. Engineered: yes VNG00492 cluster03 -> 1chrA2 7.3682759 202 / 99 conP: 0.182 CATH-ID: 3.20.20.120 Chloromuconate cycloisomerase VNG00492 cluster04 -> 1i9cA 8.1266986 137 / 99 conP: 0.305 NO-CATH VNG00492 cluster12 -> 1tlfA1 9.0745110 131 / 99 conP: 0.375 CATH-ID: 3.40.50.2300 Tryptic core fragment of the lactose repressor of escherichia coli --end-- VNG00500 one-of-top-five-correct: 0.341548319893489 CThresh: 6.971060 53 best_is: cluster19 VNG00500 cluster00 -> 1c9bA2 7.7966257 106 / 111 conP: 0.322 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG00500 cluster01 -> 1qaxA2 7.0381593 260 / 111 conP: 0.126 CATH-ID: 3.90.770.10 3-hydroxy-3-methylglutaryl-coenzyme a reductase. Chain: a, b. Engineer VNG00500 cluster02 -> 1a0b00 7.8595880 117 / 111 conP: 0.311 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG00500 cluster03 -> 1rmi_ 6.1515051 160 / 111 conP: 0.174 NO-CATH VNG00500 cluster04 -> 1azsA0 7.6940158 190 / 111 conP: 0.214 CATH-ID: 3.50.6.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG00500 cluster19 -> 1brrA0 8.1349060 230 / 111 conP: 0.193 CATH-ID: 1.20.85.10 Bacteriorhodopsin. Chain: a, b, c. Synonym: br. Other_details: schiff --end-- VNG00511 one-of-top-five-correct: 0.511665389744993 CThresh: 3.000753 82 best_is: cluster03 VNG00511 cluster00 -> 1ddbA0 7.1396865 195 / 66 conP: 0.149 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG00511 cluster01 -> 1b3uA0 7.1396865 588 / 66 conP: 0.003 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG00511 cluster02 -> 1ddbA0 8.8548983 195 / 66 conP: 0.223 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG00511 cluster03 -> 1ddbA0 9.2837013 195 / 66 conP: 0.245 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG00511 cluster04 -> 1ddbA0 8.2116939 195 / 66 conP: 0.193 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer --end-- VNG0055h one-of-top-five-correct: 0.208188635465233 CThresh: 6.860730 75 best_is: cluster18 VNG0055h cluster00 -> 1jftA 4.7264832 340 / 87 conP: 0.021 NO-CATH VNG0055h cluster01 -> 1dmuA0 6.1796227 299 / 87 conP: 0.044 CATH-ID: 3.40.600.20 Bgli restriction endonuclease. Chain: a. Engineered: yes. DNA (5'- d( VNG0055h cluster02 -> 1a8y02 5.5089962 102 / 87 conP: 0.155 CATH-ID: 3.40.30.10 Calsequestrin. Chain: null VNG0055h cluster03 -> 1el6A3 5.7852042 109 / 87 conP: 0.158 CATH-ID: 3.30.70.570 Baseplate structural protein gp11. Chain: a, b, c. Engineered: yes VNG0055h cluster04 -> 1dm0A 4.6534971 264 / 87 conP: 0.038 NO-CATH VNG0055h cluster18 -> 2trcP1 6.7712505 131 / 87 conP: 0.173 CATH-ID: 3.40.30.10 Transducin. Chain: b, g. Fragment: lys-c resistant fragment, the gamma --end-- VNG00562 one-of-top-five-correct: 0.368145675550649 CThresh: 1.735376 100 best_is: cluster01 VNG00562 cluster00 -> 1c3d00 7.4448570 294 / 51 conP: 0.031 CATH-ID: 1.50.10.40 C3d. Chain: null. Engineered: yes. Mutation: c17a. Biological_unit: mo VNG00562 cluster01 -> 1bgeA0 7.4448570 159 / 51 conP: 0.170 CATH-ID: 1.20.120.200 Granulocyte colony-stimulating factor (form ii rcg-csfii) VNG00562 cluster02 -> 1k92A 7.4448570 444 / 51 conP: 0.004 NO-CATH VNG00562 cluster03 -> 2occC1 6.9816067 70 / 51 conP: 0.378 CATH-ID: 1.20.15.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG00562 cluster04 -> 1fjgT0 7.2132319 99 / 51 conP: 0.304 CATH-TRUNC --end-- VNG00563 one-of-top-five-correct: 0.434772215419968 CThresh: 5.588788 75 best_is: cluster03 VNG00563 cluster00 -> 2tpt01 7.6996910 107 / 102 conP: 0.357 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG00563 cluster01 -> 2sas00 6.5289834 185 / 102 conP: 0.188 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein (iso type ii) VNG00563 cluster02 -> 2tpt01 7.7995183 107 / 102 conP: 0.364 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG00563 cluster03 -> 14psA0 8.7915516 226 / 102 conP: 0.252 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG00563 cluster04 -> 1bkdS2 7.2805345 242 / 102 conP: 0.163 CATH-ID: 1.10.840.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y --end-- VNG00592 one-of-top-five-correct: 0.468641303449066 CThresh: 2.271444 100 best_is: cluster13 VNG00592 cluster00 -> 1pgjA2 7.8193678 258 / 64 conP: 0.104 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase. Chain: a, b. Synonym: 6pgdh, 6-pgdh. VNG00592 cluster01 -> 1flp00 7.8777034 142 / 64 conP: 0.297 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG00592 cluster02 -> 1msk02 6.0482376 88 / 64 conP: 0.310 CATH-ID: 1.10.288.10 Cobalamin-dependent methionine synthase. Chain: null. Fragment: activa VNG00592 cluster03 -> 1d8bA0 5.7975549 81 / 64 conP: 0.311 CATH-ID: 1.10.150.80 Sgs1 recq helicase. Chain: a. Fragment: hrdc domain. Engineered: yes VNG00592 cluster04 -> 1qqiA0 7.5290686 104 / 64 conP: 0.366 CATH-ID: 1.10.10.10 Phosphate regulon transcriptional regulatory protein phob. Chain: a. F VNG00592 cluster13 -> 1ddbA0 8.5268940 195 / 64 conP: 0.222 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer --end-- VNG00601 one-of-top-five-correct: 0.495181988463826 CThresh: 2.520406 100 best_is: cluster18 VNG00601 cluster00 -> 1e5rA 7.4780739 260 / 73 conP: 0.129 NO-CATH VNG00601 cluster01 -> 1babA0 7.2700956 142 / 73 conP: 0.301 CATH-ID: 1.10.490.10 Hemoglobin thionville alpha chain mutant with val 1 replaced by glu an VNG00601 cluster02 -> 1mroA3 6.2309810 227 / 73 conP: 0.124 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG00601 cluster03 -> 1dlwA0 6.8541389 116 / 73 conP: 0.329 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a. Engineered: yes VNG00601 cluster04 -> 1acf00 8.3099873 125 / 73 conP: 0.406 CATH-ID: 3.30.450.30 Profilin i VNG00601 cluster18 -> 1babA0 8.7259440 142 / 73 conP: 0.396 CATH-ID: 1.10.490.10 Hemoglobin thionville alpha chain mutant with val 1 replaced by glu an --end-- VNG00621 one-of-top-five-correct: 0.494590781258832 CThresh: 3.006686 92 best_is: cluster00 VNG00621 cluster00 -> 1hd2A0 9.1221657 161 / 65 conP: 0.301 CATH-ID: 3.40.30.10 Peroxiredoxin 5 residues 54-214. Chain: a. Synonym: prdx5, prxv, aoeb1 VNG00621 cluster01 -> 8rucA2 8.5501982 313 / 65 conP: 0.066 CATH-ID: 3.20.20.110 Ribulose-1,5-bisphosphate carboxylase/oxygenase. Chain: a, c, e, g, i, VNG00621 cluster02 -> 1kv5A 7.8298290 249 / 65 conP: 0.103 NO-CATH VNG00621 cluster03 -> 1fdr02 7.8298290 152 / 65 conP: 0.246 CATH-ID: 3.40.50.80 Flavodoxin reductase. Chain: null. Synonym: ferredoxin reductase. Engi VNG00621 cluster04 -> 1hf2A 8.9067762 196 / 65 conP: 0.217 NO-CATH --end-- VNG0066h one-of-top-five-correct: 0.390670539403027 CThresh: 3.114769 75 best_is: cluster16 VNG0066h cluster00 -> 1bl0A1 6.4967938 56 / 75 conP: 0.414 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG0066h cluster01 -> 1e01A0 5.5025069 48 / 75 conP: 0.364 CATH-ID: 3.10.350.10 Membrane-bound lytic murein transglycosylase d. Synonym: mltd, murein VNG0066h cluster02 -> 1hhsA 5.7615593 664 / 75 conP: 0.002 NO-CATH VNG0066h cluster03 -> 1gln05 6.7789856 98 / 75 conP: 0.341 CATH-ID: 1.10.10.350 Glutamyl-tRNA synthetase. Chain: null VNG0066h cluster04 -> 2eiaA1 5.9538435 132 / 75 conP: 0.229 CATH-ID: 1.10.375.10 Eiav capsid protein p26. Chain: a, b. Engineered: yes VNG0066h cluster16 -> 1b9nA1 7.7858819 102 / 75 conP: 0.400 CATH-ID: 1.10.10.10 Mode. Chain: a, b. Engineered: yes --end-- VNG0067h one-of-top-five-correct: 0.303972959366841 CThresh: 5.944940 75 best_is: cluster05 VNG0067h cluster00 -> 1vhh00 5.9535469 157 / 88 conP: 0.144 CATH-ID: 3.30.70.540 Sonic hedgehog. Chain: null. Domain: amino-terminal domain (residues 3 VNG0067h cluster01 -> 1c3cA1 5.7506580 91 / 88 conP: 0.212 CATH-ID: 1.10.275.10 Adenylosuccinate lyase. Chain: a, b. Engineered: yes VNG0067h cluster02 -> 1b25A2 6.3001248 178 / 88 conP: 0.136 CATH-ID: 1.10.569.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG0067h cluster03 -> 1i4fA 5.3639700 275 / 88 conP: 0.053 NO-CATH VNG0067h cluster04 -> 1bu2A2 5.9227623 102 / 88 conP: 0.206 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0067h cluster05 -> 1jkw02 7.7222776 101 / 88 conP: 0.305 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y --end-- VNG0068h one-of-top-five-correct: 0.36655000354394 CThresh: 1.193308 100 best_is: cluster06 VNG0068h cluster00 -> 1k1aA 6.4665934 228 / 52 conP: 0.068 NO-CATH VNG0068h cluster01 -> 1sw6A0 6.9271692 254 / 52 conP: 0.055 CATH-ID: 1.25.40.20 Regulatory protein swi6. Chain: a, b. Fragment: ankyrin-repeat domain. VNG0068h cluster02 -> 1qsaA2 6.2363054 70 / 52 conP: 0.363 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG0068h cluster03 -> 1k1aA 6.0060175 228 / 52 conP: 0.060 NO-CATH VNG0068h cluster04 -> 1ap700 6.0060175 168 / 52 conP: 0.125 CATH-ID: 1.25.40.20 P19-ink4d. Chain: null. Synonym: cyclin dependent kinase 4 inhibitor d VNG0068h cluster06 -> 1sw6A0 7.1574571 254 / 52 conP: 0.059 CATH-ID: 1.25.40.20 Regulatory protein swi6. Chain: a, b. Fragment: ankyrin-repeat domain. --end-- VNG0069h one-of-top-five-correct: 0.4657302761897 CThresh: 2.819196 100 best_is: cluster19 VNG0069h cluster00 -> 1whtA0 7.4449098 250 / 64 conP: 0.092 CATH-ID: 3.40.50.1570 Serine carboxypeptidase ii complexed with l-benzylsuccinate VNG0069h cluster01 -> 1whtA0 6.7957192 250 / 64 conP: 0.077 CATH-ID: 3.40.50.1570 Serine carboxypeptidase ii complexed with l-benzylsuccinate VNG0069h cluster02 -> 1dpe03 7.3150415 219 / 64 conP: 0.120 CATH-ID: 3.10.105.10 Dipeptide-binding protein. Chain: null. Synonym: dipeptide permease VNG0069h cluster03 -> 1whtA0 7.2285129 250 / 64 conP: 0.087 CATH-ID: 3.40.50.1570 Serine carboxypeptidase ii complexed with l-benzylsuccinate VNG0069h cluster04 -> 1cy5A0 7.6808178 92 / 64 conP: 0.378 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re VNG0069h cluster19 -> 1ddf00 8.7432908 127 / 64 conP: 0.360 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes --end-- VNG0070h one-of-top-five-correct: 0.272490384712707 CThresh: 6.926424 32 best_is: cluster19 VNG0070h cluster00 -> 1jud02 5.4642065 75 / 96 conP: 0.200 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG0070h cluster01 -> 1aqt02 5.0778183 47 / 96 conP: 0.215 CATH-ID: 1.20.15.20 Atp synthase. Chain: null. Fragment: epsilon chain. Engineered: yes. M VNG0070h cluster02 -> 1c3uA3 5.6703756 82 / 96 conP: 0.201 CATH-ID: 1.10.164.30 Adenylosuccinate lyase. Chain: a, b. Engineered: yes VNG0070h cluster03 -> 1a1w00 6.5024456 83 / 96 conP: 0.241 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG0070h cluster04 -> 1ljwA 4.7800706 141 / 96 conP: 0.112 NO-CATH VNG0070h cluster19 -> 1bhmA0 7.5648090 198 / 96 conP: 0.157 CATH-ID: 3.40.91.20 Endonuclease bamhi. Chain: a, b. Synonym: r. Bamhi. Engineered: yes. D --end-- VNG0075h one-of-top-five-correct: 0.279497354637708 CThresh: 5.060783 75 best_is: cluster04 VNG0075h cluster00 -> 1azwA0 4.7743555 313 / 73 conP: 0.022 CATH-ID: 3.40.50.950 Proline iminopeptidase. Chain: a, b. Engineered: yes VNG0075h cluster01 -> 1jncA 6.6389511 123 / 73 conP: 0.195 NO-CATH VNG0075h cluster02 -> 1a7602 5.7519580 60 / 73 conP: 0.256 CATH-ID: 1.10.150.20 Flap endonuclease-1 protein. Chain: null VNG0075h cluster03 -> 1gtxA1 5.5206645 167 / 73 conP: 0.103 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG0075h cluster04 -> 1jhgA0 7.3384403 101 / 73 conP: 0.268 CATH-ID: 1.10.1270.10 Trp operon repressor. Chain: a. Engineered: yes. Mutation: chain a, v5 --end-- VNG0076h one-of-top-five-correct: 0.162418135659437 CThresh: 3.025896 75 best_is: cluster19 VNG0076h cluster00 -> 1bxeA0 5.0616836 108 / 38 conP: 0.079 CATH-ID: 3.90.470.10 Ribosomal protein l22. Chain: a. Engineered: yes. Mutation: yes VNG0076h cluster01 -> 1gr7A 4.8089997 126 / 38 conP: 0.054 NO-CATH VNG0076h cluster02 -> 1bob03 5.3143675 54 / 38 conP: 0.199 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG0076h cluster03 -> 1schA2 3.7982641 135 / 38 conP: 0.035 CATH-ID: 1.10.420.10 Peanut peroxidase, major cationic isozyme. Chain: a, b. Synonym: pnp. VNG0076h cluster04 -> 1hcrA0 4.8089997 52 / 38 conP: 0.182 CATH-ID: 1.10.10.60 Hin recombinase (DNA-binding domain) complexed with DNA VNG0076h cluster19 -> 1a8vA1 5.3143675 49 / 38 conP: 0.214 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi --end-- VNG0079h one-of-top-five-correct: 0.182061614382253 CThresh: 6.990823 67 best_is: cluster05 VNG0079h cluster00 -> 1pot01 5.9188440 166 / 70 conP: 0.072 CATH-ID: 3.40.190.10 Spermidine/putrescine-binding protein. Chain: null. Synonym: potd. Oth VNG0079h cluster01 -> 1ysc01 5.2869505 349 / 70 conP: 0.010 CATH-ID: 3.40.50.950 Serine carboxypeptidase (cpy, cpd-y, or proteinasE C) VNG0079h cluster02 -> 1ytbA2 4.4444258 86 / 70 conP: 0.101 CATH-ID: 3.30.310.10 Tata-box binding protein (ytbp) complexed with DNA containing tata-box VNG0079h cluster03 -> 1br6A1 5.0763193 179 / 70 conP: 0.051 CATH-ID: 3.40.420.10 Ricin. Chain: a. Synonym: rta. Engineered: yes VNG0079h cluster04 -> 1i4nA 5.7082128 251 / 70 conP: 0.030 NO-CATH VNG0079h cluster05 -> 1k3fA 6.7613687 253 / 70 conP: 0.040 NO-CATH --end-- VNG00810 one-of-top-five-correct: 0.30826724292399 CThresh: 5.107498 75 best_is: cluster19 VNG00810 cluster00 -> 1dioB0 5.7319448 179 / 82 conP: 0.122 CATH-ID: 3.40.990.10 Diol dehydratase. Chain: a, l. Engineered: yes. Diol dehydratase. Chai VNG00810 cluster01 -> 1qdlB0 5.9327293 195 / 82 conP: 0.114 CATH-ID: 3.40.50.880 Anthranilate synthase (trpe-subunit). Chain: a. Fragment: aminodeoxyis VNG00810 cluster02 -> 1ithA0 6.4428972 141 / 82 conP: 0.191 CATH-ID: 1.10.490.10 Hemoglobin (cyanomet) VNG00810 cluster03 -> 1dlxA0 7.0401231 120 / 82 conP: 0.251 CATH-ID: 3.30.920.10 Frataxin. Chain: a. Fragment: c-terminal domain (91-130). Engineered: VNG00810 cluster04 -> 1pkyA1 5.7319448 128 / 82 conP: 0.177 CATH-ID: 3.40.50.50 Pyruvate kinase. Chain: a, b, c, d. Other_details: t state VNG00810 cluster19 -> 1d1dA1 7.5344570 140 / 82 conP: 0.245 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes --end-- VNG00851 one-of-top-five-correct: 0.245165538781962 CThresh: 7.993176 25 best_is: cluster03 VNG00851 cluster00 -> 1c0iA 6.2846672 363 / 117 conP: 0.053 NO-CATH VNG00851 cluster01 -> 1cf7B0 4.9288066 82 / 117 conP: 0.170 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG00851 cluster02 -> 1bmtA2 6.2236283 158 / 117 conP: 0.159 CATH-ID: 3.40.50.280 Methionine synthase (b12-binding domains) VNG00851 cluster03 -> 1l6wA 7.1801992 220 / 117 conP: 0.147 NO-CATH VNG00851 cluster04 -> 1skf00 5.0856618 262 / 117 conP: 0.068 CATH-ID: 3.40.710.10 D-alanyl-d-alanine transpeptidase. Chain: null. Ec: 3.4.16.4 --end-- VNG01062 one-of-top-five-correct: 0.414997653242312 CThresh: 4.817350 75 best_is: cluster18 VNG01062 cluster00 -> 1avpA0 6.8245863 204 / 86 conP: 0.154 CATH-ID: 3.40.395.10 Adenoviral proteinase. Chain: a. Fragment: main. Synonym: avp. Enginee VNG01062 cluster01 -> 1bh9A0 5.8969285 45 / 86 conP: 0.338 CATH-ID: 1.10.20.10 Tafii18. Chain: a. Fragment: residues 31 - 75. Synonym: transcription VNG01062 cluster02 -> 1qaxA2 6.4466854 260 / 86 conP: 0.094 CATH-ID: 3.90.770.10 3-hydroxy-3-methylglutaryl-coenzyme a reductase. Chain: a, b. Engineer VNG01062 cluster03 -> 1b65A 7.2073430 363 / 86 conP: 0.053 NO-CATH VNG01062 cluster04 -> 1cf7B0 7.6267428 82 / 86 conP: 0.383 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG01062 cluster18 -> 1mba00 8.5844543 146 / 86 conP: 0.327 CATH-ID: 1.10.490.10 Myoglobin (met) ( p H 7.0) --end-- VNG01130 one-of-top-five-correct: 0.217636000776331 CThresh: 6.994665 40 best_is: cluster01 VNG01130 cluster00 -> 1tsrA0 5.8767511 196 / 98 conP: 0.107 CATH-ID: 2.60.40.720 P53 tumor suppressor. Chain: a, b, c. Engineered: yes. DNA. Chain: e, VNG01130 cluster01 -> 1csn01 6.7358675 82 / 98 conP: 0.257 CATH-ID: 3.30.200.20 Casein kinase-1. Heterogen: mg-atp VNG01130 cluster02 -> 191400 4.9257852 171 / 98 conP: 0.098 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG01130 cluster03 -> 1mpyA2 5.2385462 158 / 98 conP: 0.115 CATH-ID: 3.10.180.10 Catechol 2,3-dioxygenase. Chain: a, b, c, d. Synonym: metapyrocatechas VNG01130 cluster04 -> 1cojA0 6.3715959 211 / 98 conP: 0.110 CATH-ID: 3.90.149.10 Superoxide dismutase. Chain: a. Engineered: yes. Biological_unit: homo --end-- VNG01131 one-of-top-five-correct: 0.445847207906368 CThresh: 4.929050 75 best_is: cluster15 VNG01131 cluster00 -> 1enh00 7.7330147 54 / 113 conP: 0.512 CATH-ID: 1.10.10.60 Engrailed homeodomain VNG01131 cluster01 -> 1bw6A0 7.6230167 56 / 113 conP: 0.501 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer VNG01131 cluster02 -> 1ba500 7.5609937 53 / 113 conP: 0.501 CATH-ID: 1.10.10.60 Htrf1. Chain: null. Fragment: DNA-binding domain. Synonym: telomeric r VNG01131 cluster03 -> 1mbe00 7.2265949 52 / 113 conP: 0.478 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG01131 cluster04 -> 1bw6A0 6.2715493 56 / 113 conP: 0.404 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer VNG01131 cluster15 -> 1colA0 8.3649118 197 / 113 conP: 0.341 CATH-ID: 1.10.490.30 Colicin A (c-terminal domain) (pore-forming domain) --end-- VNG0117h one-of-top-five-correct: 0.336489142501321 CThresh: 6.279420 75 best_is: cluster12 VNG0117h cluster00 -> 1fruA1 5.8970753 177 / 90 conP: 0.121 CATH-ID: 3.30.500.10 Fc (igg) receptor (neonatal) (orthorhombic crystal form) (fcrn) (extra VNG0117h cluster01 -> 1faeA1 4.5307615 425 / 90 conP: 0.013 CATH-ID: 1.50.10.10 Endo-1,4-beta-glucanase f. Chain: a. Fragment: catalytic module. Synon VNG0117h cluster02 -> 1bncA3 4.5490952 60 / 90 conP: 0.188 CATH-ID: 2.30.35.30 Biotin carboxylase. Chain: a, b. Ec: 6.3.4.14 VNG0117h cluster03 -> 1bx2B 6.2616333 191 / 90 conP: 0.120 NO-CATH VNG0117h cluster04 -> 1hw5A2 6.0813734 68 / 90 conP: 0.252 CATH-ID: 1.10.10.10 Catabolite gene activator. Chain: a, b. Synonym: camp receptor protein VNG0117h cluster12 -> 1znbA0 8.2376115 228 / 90 conP: 0.153 CATH-ID: 3.60.15.10 Metallo-beta-lactamase. Chain: a, b. Synonym: class b beta-lactamase. --end-- VNG0118h one-of-top-five-correct: 0.240578302024826 CThresh: 8.302255 25 best_is: cluster17 VNG0118h cluster00 -> 1bha00 5.8109547 67 / 126 conP: 0.228 CATH-ID: 1.20.15.140 Bacteriorhodopsin (proteolytic fragment 1 - 71, solubilized in sds mic VNG0118h cluster01 -> 1kj3I 5.0653743 278 / 126 conP: 0.069 NO-CATH VNG0118h cluster02 -> 5tmpA0 4.5695740 210 / 126 conP: 0.085 CATH-ID: 3.40.50.300 Thymidylate kinase. Chain: a. Engineered: yes VNG0118h cluster03 -> 1mnmA 4.9718840 85 / 126 conP: 0.173 NO-CATH VNG0118h cluster04 -> 1am9A0 4.5422160 80 / 126 conP: 0.160 CATH-ID: 4.10.280.10 Sterol regulatory element binding protein 1a. Chain: a, b, c, d. Fragm VNG0118h cluster17 -> 1tfe01 7.0471428 97 / 126 conP: 0.263 CATH-ID: 3.30.479.20 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain --end-- VNG0119h one-of-top-five-correct: 0.312050898224738 CThresh: 3.246695 75 best_is: cluster12 VNG0119h cluster00 -> 1bi2B1 6.5183565 73 / 51 conP: 0.266 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG0119h cluster01 -> 2a3dA0 7.4448570 73 / 51 conP: 0.322 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG0119h cluster02 -> 2bct00 6.9816067 502 / 51 conP: 0.001 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG0119h cluster03 -> 1fts01 5.3602307 84 / 51 conP: 0.183 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG0119h cluster04 -> 1fohA1 6.7499816 253 / 51 conP: 0.032 CATH-ID: 3.50.50.60 Phenol hydroxylase. Chain: a, b, c, d. Engineered: yes. Biological_uni VNG0119h cluster12 -> 1bqg01 7.4448570 138 / 51 conP: 0.163 CATH-ID: 3.30.390.10 D-glucarate dehydratase. Chain: null. Engineered: yes. Biological_unit --end-- VNG0120h one-of-top-five-correct: 0.171807127282778 CThresh: 3.559357 75 best_is: cluster19 VNG0120h cluster00 -> 1hx0A 4.9487457 495 / 40 conP: 0.000 NO-CATH VNG0120h cluster01 -> 1wjbA0 4.6068526 55 / 40 conP: 0.158 CATH-ID: 1.10.10.200 HIV-1 integrase. Chain: a, b VNG0120h cluster02 -> 1qlmA1 4.7786218 118 / 40 conP: 0.062 CATH-ID: 3.10.340.11 Methenyltetrahydromethanopterin cyclohydrolase. Chain: a. Engineered: VNG0120h cluster03 -> 2ifeA0 3.9531217 91 / 40 conP: 0.077 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin VNG0120h cluster04 -> 2ifeA0 5.4465578 91 / 40 conP: 0.113 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin VNG0120h cluster19 -> 1b7yB1 5.6954638 70 / 40 conP: 0.165 CATH-ID: 3.30.56.10 Phenylalanyl-tRNA synthetase. Chain: a. Synonym: phers. Phenylalanyl-t --end-- VNG0125h one-of-top-five-correct: 0.258285437285577 CThresh: 8.383727 25 best_is: cluster00 VNG0125h cluster00 -> 1eo0A0 7.3203282 77 / 127 conP: 0.300 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En VNG0125h cluster01 -> 1chkA1 6.6258639 143 / 127 conP: 0.196 CATH-ID: 1.20.141.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG0125h cluster02 -> 1rpa00 6.1331553 342 / 127 conP: 0.066 CATH-ID: 3.40.50.1240 Prostatic acid phosphatase complexed with tartaric acid VNG0125h cluster03 -> 1itf00 6.4845750 165 / 127 conP: 0.172 CATH-ID: 1.20.120.210 Interferon alpha-2a. Chain: null. Engineered: yes. Biological_unit: mo VNG0125h cluster04 -> 1iku01 5.9815145 94 / 127 conP: 0.210 CATH-ID: 1.10.238.10 Recoverin. Chain: null. Engineered: yes --end-- VNG0127c one-of-top-five-correct: 0.362096270108151 CThresh: 6.117272 75 best_is: cluster18 VNG0127c cluster00 -> 1ospO3 5.1383540 102 / 108 conP: 0.209 CATH-ID: 3.66.10.1 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG0127c cluster01 -> 2hhmA1 7.2993904 142 / 108 conP: 0.275 CATH-ID: 3.30.540.10 Human inositol monophosphatase dimer complex with gadolinium and sulfa VNG0127c cluster02 -> 1cb8A2 5.2683639 246 / 108 conP: 0.097 CATH-ID: 2.70.98.20 Chondroitinase ac. Chain: a. Ec: 4.2.2.5 VNG0127c cluster03 -> 1rypB0 5.6376414 250 / 108 conP: 0.105 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG0127c cluster04 -> 1nscA0 6.1915577 390 / 108 conP: 0.052 CATH-ID: 2.120.10.10 Neuraminidase (sialidase) complex with n-acetyl neuraminic acid (siali VNG0127c cluster18 -> 1ei5A1 8.0627374 321 / 108 conP: 0.129 CATH-ID: 3.40.710.10 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes --end-- VNG01290 one-of-top-five-correct: 0.435776909337888 CThresh: 2.929464 100 best_is: cluster19 VNG01290 cluster00 -> 1a2vA1 8.3540866 100 / 59 conP: 0.368 CATH-ID: 3.10.30.70 Methylamine oxidase. Chain: a, b, c, d, e, f. Engineered: yes. Biologi VNG01290 cluster01 -> 1ofgA2 7.6888363 190 / 59 conP: 0.142 CATH-ID: 3.30.360.10 Glucose-fructose oxidoreductase. Chain: a, b, c, d, e, f. Ec: 1.1.99.2 VNG01290 cluster02 -> 1sesA2 6.5800857 318 / 59 conP: 0.026 CATH-ID: 3.40.690.10 Seryl-tRNA synthetase (serine-tRNA ligase) complexed with seryl-hydrox VNG01290 cluster03 -> 1g5hA 7.9105864 399 / 59 conP: 0.015 NO-CATH VNG01290 cluster04 -> 2polA3 7.9105864 119 / 59 conP: 0.290 CATH-ID: 3.10.150.10 Pol iii (beta subunit) VNG01290 cluster19 -> 1hw7A 8.5758367 229 / 59 conP: 0.118 NO-CATH --end-- VNG0130h one-of-top-five-correct: 0.414694007473019 CThresh: 3.939214 75 best_is: cluster04 VNG0130h cluster00 -> 1rypH0 7.5443605 205 / 59 conP: 0.095 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG0130h cluster01 -> 1drgA 7.6888363 313 / 59 conP: 0.030 NO-CATH VNG0130h cluster02 -> 1bia02 6.8018358 181 / 59 conP: 0.102 CATH-ID: 3.30.930.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0130h cluster03 -> 1jf7A 7.8940737 281 / 59 conP: 0.045 NO-CATH VNG0130h cluster04 -> 1guxB0 8.7975869 141 / 59 conP: 0.244 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer --end-- VNG01330 one-of-top-five-correct: 0.184769866725921 CThresh: 6.998703 70 best_is: cluster14 VNG01330 cluster00 -> 2lbp02 4.8977625 145 / 88 conP: 0.097 CATH-ID: 3.40.50.3600 Leucine-binding protein ( LBP ) VNG01330 cluster01 -> 1mdl01 4.5078260 126 / 88 conP: 0.101 CATH-ID: 3.30.390.10 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r VNG01330 cluster02 -> 1ebfA2 5.1941520 175 / 88 conP: 0.085 CATH-ID: 3.90.750.10 Homoserine dehydrogenase. Chain: a, b. Engineered: yes VNG01330 cluster03 -> 1iarB2 5.1680373 92 / 88 conP: 0.151 CATH-ID: 2.60.40.30 Interleukin-4. Chain: a. Engineered: yes. Interleukin-4 receptor alpha VNG01330 cluster04 -> 1eif02 4.7697299 60 / 88 conP: 0.170 CATH-ID: 2.40.50.130 Eukaryotic translation initiation factor 5a. Chain: null. Engineered: VNG01330 cluster14 -> 1f94A0 6.4045771 63 / 88 conP: 0.242 CATH-ID: 2.10.60.10 Bucandin. Chain: a --end-- VNG01332 one-of-top-five-correct: 0.321692528731781 CThresh: 4.988890 75 best_is: cluster17 VNG01332 cluster00 -> 1e2tA2 6.8797522 115 / 75 conP: 0.230 CATH-ID: 2.40.128.40 N-hydroxyarylamine o-acetyltransferase. Chain: a, b, c, d, e, f, g, h. VNG01332 cluster01 -> 1acf00 6.7789856 125 / 75 conP: 0.209 CATH-ID: 3.30.450.30 Profilin i VNG01332 cluster02 -> 1hn2A 5.5412725 159 / 75 conP: 0.118 NO-CATH VNG01332 cluster03 -> 1oacA1 6.8134434 80 / 75 conP: 0.288 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 VNG01332 cluster04 -> 1k82A 5.9538435 260 / 75 conP: 0.056 NO-CATH VNG01332 cluster17 -> 1acf00 7.8104132 125 / 75 conP: 0.262 CATH-ID: 3.30.450.30 Profilin i --end-- VNG01340 one-of-top-five-correct: 0.430513741385386 CThresh: 4.499180 75 best_is: cluster16 VNG01340 cluster00 -> 1wer02 5.1592367 148 / 74 conP: 0.127 CATH-ID: 1.10.494.10 P120gap. Chain: null. Fragment: catalytic domain, residues 714 - 1047. VNG01340 cluster01 -> 1wer02 7.0233586 148 / 74 conP: 0.199 CATH-ID: 1.10.494.10 P120gap. Chain: null. Fragment: catalytic domain, residues 714 - 1047. VNG01340 cluster02 -> 1ash00 6.4019846 147 / 74 conP: 0.173 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG01340 cluster03 -> 1bu2A2 6.6048498 102 / 74 conP: 0.254 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG01340 cluster04 -> 1eo0A0 6.4019846 77 / 74 conP: 0.289 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En VNG01340 cluster16 -> 1b3uA0 8.8874806 588 / 74 conP: 0.007 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu --end-- VNG01370 one-of-top-five-correct: 0.387693781374101 CThresh: 6.848445 75 best_is: cluster14 VNG01370 cluster00 -> 1otgA0 8.1234905 125 / 111 conP: 0.323 CATH-ID: 3.30.457.20 5-carboxymethyl-2-hydroxymuconate isomerase. Chain: a, b, c. Engineere VNG01370 cluster01 -> 1tkiA1 7.1716524 84 / 111 conP: 0.319 CATH-ID: 3.30.200.20 Titin. Chain: a, b. Fragment: kinase. Engineered: yes VNG01370 cluster02 -> 2fbjH2 7.2700956 73 / 111 conP: 0.341 CATH-ID: 2.60.40.10 Ig A fab fragment (j539) (galactan-binding) VNG01370 cluster03 -> 1hka00 8.6037797 158 / 111 conP: 0.308 CATH-ID: 3.30.70.560 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase. Chain: null. Syno VNG01370 cluster04 -> 1hka00 7.0363064 158 / 111 conP: 0.220 CATH-ID: 3.30.70.560 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase. Chain: null. Syno VNG01370 cluster14 -> 1otgA0 8.6251283 125 / 111 conP: 0.355 CATH-ID: 3.30.457.20 5-carboxymethyl-2-hydroxymuconate isomerase. Chain: a, b, c. Engineere --end-- VNG0138h one-of-top-five-correct: 0.555131446175725 CThresh: 2.443989 100 best_is: cluster09 VNG0138h cluster00 -> 1vin02 6.1529411 113 / 82 conP: 0.334 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG0138h cluster01 -> 1ctf00 6.3056058 68 / 82 conP: 0.435 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG0138h cluster02 -> 1serA1 5.9021462 53 / 82 conP: 0.438 CATH-ID: 1.20.15.10 Seryl-tRNA synthetase complexed with tRNA-ser 2 (gga anticodon) VNG0138h cluster03 -> 1pbwA0 6.3342984 184 / 82 conP: 0.224 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG0138h cluster04 -> 1vhh00 6.3342984 157 / 82 conP: 0.267 CATH-ID: 3.30.70.540 Sonic hedgehog. Chain: null. Domain: amino-terminal domain (residues 3 VNG0138h cluster09 -> 1elrA0 9.1452821 128 / 82 conP: 0.511 CATH-ID: 1.25.40.10 Tpr2a-domain of hop. Chain: a. Fragment: middle domain. Engineered: ye --end-- VNG0140h one-of-top-five-correct: 0.282169854614346 CThresh: 5.835924 75 best_is: cluster14 VNG0140h cluster00 -> 1ejkA0 5.0237741 81 / 69 conP: 0.151 CATH-ID: 3.30.910.10 Dini protein. Chain: a. Engineered: yes VNG0140h cluster01 -> 4crxA2 4.8972666 111 / 69 conP: 0.112 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG0140h cluster02 -> 1af701 5.1230855 80 / 69 conP: 0.156 CATH-ID: 1.10.155.10 Chemotaxis receptor methyltransferase cher. Chain: null. Engineered: y VNG0140h cluster03 -> 2eiaA1 5.0125883 132 / 69 conP: 0.096 CATH-ID: 1.10.375.10 Eiav capsid protein p26. Chain: a, b. Engineered: yes VNG0140h cluster04 -> 1uxy03 5.3203619 150 / 69 conP: 0.088 CATH-ID: 3.30.465.10 Uridine diphospho-n-acetylenolpyruvylglucosamine reductase. Chain: nul VNG0140h cluster14 -> 1aorA2 7.8172812 186 / 69 conP: 0.121 CATH-ID: 1.10.569.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri --end-- VNG0141h one-of-top-five-correct: 0.327785631865569 CThresh: 5.486765 75 best_is: cluster06 VNG0141h cluster00 -> 1mdl01 6.3998700 126 / 87 conP: 0.211 CATH-ID: 3.30.390.10 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r VNG0141h cluster01 -> 1bix00 7.3628783 275 / 87 conP: 0.096 CATH-ID: 3.60.10.10 Ap endonuclease 1. Chain: null. Engineered: yes. Biological_unit: mono VNG0141h cluster02 -> 1ps1A0 6.5740413 304 / 87 conP: 0.063 CATH-ID: 1.10.615.10 Pentalenene synthase. Chain: a, b. Engineered: yes. Biological_unit: m VNG0141h cluster03 -> 1dkxA2 7.3651143 80 / 87 conP: 0.338 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG0141h cluster04 -> 1jf7A 7.7581601 281 / 87 conP: 0.102 NO-CATH VNG0141h cluster06 -> 1cjl00.man 7.8390286 215 / 87 conP: 0.165 NO-CATH --end-- VNG0142c one-of-top-five-correct: 0.511557215140206 CThresh: 6.024544 75 best_is: cluster18 VNG0142c cluster00 -> 1enh00 6.5955648 54 / 133 conP: 0.415 CATH-ID: 1.10.10.60 Engrailed homeodomain VNG0142c cluster01 -> 1mbe00 7.2265949 52 / 133 conP: 0.463 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG0142c cluster02 -> 1sfe02 7.4672969 84 / 133 conP: 0.438 CATH-ID: 1.10.10.10 Ada o6-methylguanine-DNA methyltransferase. Chain: null. Fragment: c-t VNG0142c cluster03 -> 1idy00 6.6747465 54 / 133 conP: 0.421 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG0142c cluster04 -> 1ku3A 6.8818112 61 / 133 conP: 0.426 NO-CATH VNG0142c cluster18 -> 1bby00 9.1282202 69 / 133 conP: 0.577 CATH-ID: 1.10.10.10 Rap30. Chain: null. Fragment: DNA-binding domain. Synonym: transcripti --end-- VNG0143h one-of-top-five-correct: 0.158699751989252 CThresh: 9.983826 25 best_is: cluster16 VNG0143h cluster00 -> 1be3H0 3.9142920 64 / 136 conP: 0.116 CATH-ID: 1.10.287.20 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG0143h cluster01 -> 1aj8A2 5.4036472 98 / 136 conP: 0.144 CATH-ID: 1.10.230.10 Citrate synthase. Chain: a, b. Engineered: yes. Biological_unit: dimer VNG0143h cluster02 -> 1xsm00 4.6959257 288 / 136 conP: 0.049 CATH-ID: 1.10.620.20 Ribonucleotide reductase r2. Chain: null. Synonym: r2. Engineered: yes VNG0143h cluster03 -> 1cjcA1 3.4821004 214 / 136 conP: 0.051 CATH-ID: 3.40.50.1140 Adrenodoxin reductase. Chain: a. Synonym: adr, nadph: adrenodoxin oxid VNG0143h cluster04 -> 1yub02 3.3652394 80 / 136 conP: 0.093 CATH-ID: 1.10.221.10 Rrna methyltransferase. Chain: null. Synonym: ermam. Engineered: yes. VNG0143h cluster16 -> 1pmt02 6.1628340 107 / 136 conP: 0.167 CATH-ID: 1.20.1050.10 Glutathione transferase. Chain: null. Synonym: pmgst, gst b1-1. Engine --end-- VNG0146h one-of-top-five-correct: 0.255364473832887 CThresh: 5.514391 75 best_is: cluster07 VNG0146h cluster00 -> 1httA2 5.0691876 98 / 77 conP: 0.160 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Synonym: histidine-tRNA l VNG0146h cluster01 -> 1dn1A3 6.0924333 120 / 77 conP: 0.174 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG0146h cluster02 -> 1ev7A 5.4784859 295 / 77 conP: 0.035 NO-CATH VNG0146h cluster03 -> 1a0p01 6.3031313 91 / 77 conP: 0.225 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG0146h cluster04 -> 1jkrC 5.2123082 46 / 77 conP: 0.242 NO-CATH VNG0146h cluster07 -> 1fqvB0 7.1156790 137 / 77 conP: 0.195 CATH-ID: 3.30.710.10 Skp2. Chain: a, c, e, g, i, k, m, o. Fragment: 101-436. Synonym: cycli --end-- VNG01470 one-of-top-five-correct: 0.418076681657561 CThresh: 1.541688 100 best_is: cluster13 VNG01470 cluster00 -> 1jjuA 6.6736612 489 / 57 conP: 0.004 NO-CATH VNG01470 cluster01 -> 1hz6A0 6.4496071 67 / 57 conP: 0.395 CATH-ID: 3.10.20.210 Protein l. Chain: a, b, c. Fragment: b1 domain. Synonym: ig kappa ligh VNG01470 cluster02 -> 1elkA0 7.1217693 153 / 57 conP: 0.216 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG01470 cluster03 -> 1ihgA 7.3458234 364 / 57 conP: 0.022 NO-CATH VNG01470 cluster04 -> 1jjuA 5.6511388 489 / 57 conP: 0.003 NO-CATH VNG01470 cluster13 -> 1qjtA0 7.7939316 99 / 57 conP: 0.393 CATH-ID: 1.10.238.10 Epidermal growth factor receptor substrate substrate 15, eps15. Chain: --end-- VNG01471 one-of-top-five-correct: 0.655929539806206 CThresh: 5.646842 75 best_is: cluster12 VNG01471 cluster00 -> 1bob02 6.8299319 124 / 96 conP: 0.257 CATH-ID: 3.40.630.30 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG01471 cluster01 -> 1qsmB0 7.4951745 149 / 96 conP: 0.259 CATH-ID: 3.40.630.30 Hpa2 histone acetyltransferase. Chain: a, b, c, d. Engineered: yes VNG01471 cluster02 -> 1gytC 7.6669607 503 / 96 conP: 0.027 NO-CATH VNG01471 cluster03 -> 1u2fA0 5.7698338 90 / 96 conP: 0.246 CATH-ID: 3.30.70.330 Splicing factor u2af 65 kd subunit. Chain: a. Fragment: first RNA-bind VNG01471 cluster04 -> 1bhmA0 6.9125229 198 / 96 conP: 0.171 CATH-ID: 3.40.91.20 Endonuclease bamhi. Chain: a, b. Synonym: r. Bamhi. Engineered: yes. D VNG01471 cluster12 -> 1ej4A0 11.439150 179 / 96 conP: 0.467 CATH-ID: 3.30.760.10 Eukaryotic initiation factor 4e. Chain: a. Fragment: residues 28-217. --end-- VNG0148h one-of-top-five-correct: 0.166254817038702 CThresh: 1.413834 100 best_is: cluster09 VNG0148h cluster00 -> 1a5t02 4.4692423 40 / 35 conP: 0.250 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG0148h cluster01 -> 1floA2 4.7280758 264 / 35 conP: 0.004 CATH-ID: 1.10.443.10 Flp recombinase. Chain: a, b, c, d. Fragment: flp. Synonym: site-speci VNG0148h cluster02 -> 1aipC3 4.7280758 53 / 35 conP: 0.217 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG0148h cluster03 -> 1gln04 4.7280758 48 / 35 conP: 0.235 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG0148h cluster04 -> 1bpb01 4.4692423 58 / 35 conP: 0.189 CATH-ID: 1.10.150.20 DNA polymerase beta (beta polymerase) (apo, 31kd domain) VNG0148h cluster09 -> 1ab401 4.7280758 271 / 35 conP: 0.004 CATH-ID: 3.90.199.10 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol --end-- VNG01491 one-of-top-five-correct: 0.435213531077422 CThresh: 4.603566 75 best_is: cluster09 VNG01491 cluster00 -> 1tib00 8.4464180 269 / 70 conP: 0.089 CATH-ID: 3.40.50.950 Lipase (triacylglycerol acylhydrolase) VNG01491 cluster01 -> 1knyA2 6.7613687 128 / 70 conP: 0.198 CATH-ID: 1.20.30.20 Kanamycin nucleotidyltransferase. Chain: a, b. Synonym: kntase. Engine VNG01491 cluster02 -> 1qtwA0 6.1294751 285 / 70 conP: 0.041 CATH-ID: 3.20.20.150 Endonuclease iv. Chain: a. Engineered: yes VNG01491 cluster03 -> 1a6f00 7.5702812 113 / 70 conP: 0.266 CATH-ID: 3.30.230.10 Ribonuclease p protein. Chain: null. Synonym: rnase p protein. Enginee VNG01491 cluster04 -> 3pvaA0 7.1826310 334 / 70 conP: 0.034 CATH-ID: 3.60.60.10 Penicillin v acylase. Chain: a, b, c, d, e, f, g, h. Synonym: penicill VNG01491 cluster09 -> 1scuA2 9.0783115 166 / 70 conP: 0.248 CATH-ID: 3.40.50.261 Succinyl-coa synthetase (succinate-coa ligase) (adp-forming) --end-- VNG01493 one-of-top-five-correct: 0.265782455554996 CThresh: 4.026587 75 best_is: cluster05 VNG01493 cluster00 -> 1amx00 5.4316340 150 / 60 conP: 0.101 CATH-ID: 2.60.40.740 Collagen adhesin. Chain: null. Fragment: cbd (151 - 318). Synonym: cbd VNG01493 cluster01 -> 3vub00 5.9702728 101 / 60 conP: 0.188 CATH-ID: 2.30.30.150 Ccdb. Chain: null. Engineered: yes. Biological_unit: dimer VNG01493 cluster02 -> 1btn00 5.4316340 106 / 60 conP: 0.158 CATH-ID: 2.30.29.30 Beta-spectrin. Chain: null. Fragment: ph domain, residues 2199 - 2304. VNG01493 cluster03 -> 1cg2A1 6.0935382 279 / 60 conP: 0.029 CATH-ID: 3.40.630.10 Carboxypeptidase g2. Chain: a, b, c, d. Engineered: yes. Biological_un VNG01493 cluster04 -> 1bebA0 4.5490952 156 / 60 conP: 0.075 CATH-ID: 2.40.128.20 Beta-lactoglobulin. Chain: a, b. Biological_unit: predominantly dimeri VNG01493 cluster05 -> 1gsh02 6.9760770 105 / 60 conP: 0.228 CATH-ID: 3.30.470.20 Glutathione biosynthetic ligase. Chain: null. Synonym: glutathione syn --end-- VNG0151c one-of-top-five-correct: 0.421537922064581 CThresh: 6.605114 75 best_is: cluster07 VNG0151c cluster00 -> 1ospO2 6.2356770 76 / 92 conP: 0.240 CATH-ID: 2.20.50.10 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG0151c cluster01 -> 1bec01 7.2266912 112 / 92 conP: 0.243 CATH-ID: 2.60.40.10 14.3.D t cell antigen receptor. Chain: null. Domain: extracellular por VNG0151c cluster02 -> 1jfqH 7.1994270 220 / 92 conP: 0.123 NO-CATH VNG0151c cluster03 -> 1fus00 6.4238782 106 / 92 conP: 0.210 CATH-ID: 3.10.30.50 Ribonuclease f1 VNG0151c cluster04 -> 1ew4A0 7.5872015 106 / 92 conP: 0.271 CATH-ID: 3.30.920.10 Cyay protein. Chain: a. Engineered: yes VNG0151c cluster07 -> 1fil00 9.3321865 139 / 92 conP: 0.324 CATH-ID: 3.30.450.30 Profilin. Chain: null. Engineered: yes. Other_details: crystallized fr --end-- VNG01560 one-of-top-five-correct: 0.307367291162035 CThresh: 6.486662 75 best_is: cluster04 VNG01560 cluster00 -> 1ars02 5.3639700 271 / 88 conP: 0.048 CATH-ID: 3.40.640.10 Aspartate aminotransferase complexed with pyridoxal-5'-phosphate VNG01560 cluster01 -> 1gym00 6.7583493 296 / 88 conP: 0.059 CATH-ID: 3.20.20.190 Phosphatidylinositol-specific phospholipasE C. Chain: null. Engineered VNG01560 cluster02 -> 1g1bA 7.2373815 164 / 88 conP: 0.170 NO-CATH VNG01560 cluster03 -> 1kptA0 5.6776355 105 / 88 conP: 0.172 CATH-ID: 3.30.430.10 Kp4 toxin. Chain: a, b. Synonym: p4 toxin, kp4 killer toxin VNG01560 cluster04 -> 1qaxA1 8.0117369 110 / 88 conP: 0.282 CATH-ID: 3.30.70.420 3-hydroxy-3-methylglutaryl-coenzyme a reductase. Chain: a, b. Engineer --end-- VNG01602 one-of-top-five-correct: 0.308578959270092 CThresh: 6.992274 64 best_is: cluster17 VNG01602 cluster00 -> 1c7kA0 5.3916192 132 / 90 conP: 0.125 CATH-ID: 3.40.390.10 Zinc endoprotease. Chain: a. Synonym: ncnp. Ec: 3.4.24.- VNG01602 cluster01 -> 1eg3A3 4.9375100 82 / 90 conP: 0.156 CATH-ID: 1.10.238.60 Dystrophin. Chain: a. Fragment: ww domain. Engineered: yes VNG01602 cluster02 -> 1ckv00 7.0682014 141 / 90 conP: 0.178 CATH-ID: 3.90.56.10 Protein b. Chain: null. Biological_unit: monomer VNG01602 cluster03 -> 1bwoA0 7.0003419 90 / 90 conP: 0.240 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 VNG01602 cluster04 -> 1itg00 5.1163245 142 / 90 conP: 0.109 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant VNG01602 cluster17 -> 1a0p01 8.2110601 91 / 90 conP: 0.308 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes --end-- VNG01604 one-of-top-five-correct: 0.512161273348618 CThresh: 3.962873 75 best_is: cluster03 VNG01604 cluster00 -> 1ej4A0 9.4995738 179 / 70 conP: 0.274 CATH-ID: 3.30.760.10 Eukaryotic initiation factor 4e. Chain: a. Fragment: residues 28-217. VNG01604 cluster01 -> 4proC2 7.8653379 75 / 70 conP: 0.400 CATH-ID: 3.30.300.50 Alpha-lytic protease. Chain: a, b, c, d. Fragment: chain a, b, mature VNG01604 cluster02 -> 1ftrA1 8.6570492 147 / 70 conP: 0.290 CATH-ID: 3.30.70.520 Formylmethanofuran\:tetrahydromethanopterin formyltransferase. Chain: VNG01604 cluster03 -> 1fvqA0 9.6343843 72 / 70 conP: 0.534 CATH-ID: 3.30.70.100 Copper-transporting atpase. Chain: a. Fragment: ccc2a domain. Engineer VNG01604 cluster04 -> 1hka00 6.9719998 158 / 70 conP: 0.183 CATH-ID: 3.30.70.560 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase. Chain: null. Syno --end-- VNG01605 one-of-top-five-correct: 0.355757955719054 CThresh: 6.997054 56 best_is: cluster15 VNG01605 cluster00 -> 1xsm00 7.5856062 288 / 111 conP: 0.124 CATH-ID: 1.10.620.20 Ribonucleotide reductase r2. Chain: null. Synonym: r2. Engineered: yes VNG01605 cluster01 -> 1tmkA0 7.3928210 204 / 111 conP: 0.185 CATH-ID: 3.40.50.300 Thymidylate kinase. Chain: a, b. Engineered: yes. Biological_unit: dim VNG01605 cluster02 -> 1jgiA 6.7150736 628 / 111 conP: 0.013 NO-CATH VNG01605 cluster03 -> 1ia8A 6.6022992 272 / 111 conP: 0.105 NO-CATH VNG01605 cluster04 -> 1cuk03 7.1534013 48 / 111 conP: 0.361 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes VNG01605 cluster15 -> 1a6dA1 8.3180059 244 / 111 conP: 0.187 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer --end-- VNG01631 one-of-top-five-correct: 0.27292469892651 CThresh: 4.340241 75 best_is: cluster05 VNG01631 cluster00 -> 2mysA4 6.1665527 94 / 69 conP: 0.233 CATH-ID: 1.10.183.10 Myosin. Chain: a, b, c. Fragment: subfragment-1. Biological_unit: hexa VNG01631 cluster01 -> 1e79A3 5.7434573 131 / 69 conP: 0.156 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG01631 cluster02 -> 1ekjA0 5.7434573 210 / 69 conP: 0.077 CATH-ID: 3.40.1050.10 Beta-carbonic anhydrase. Chain: a, b, c, d, e, f, g, h. Ec: 4.2.1.1 VNG01631 cluster03 -> 1vom04 5.7434573 102 / 69 conP: 0.199 CATH-ID: 1.10.183.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y VNG01631 cluster04 -> 1jdfA 5.3294384 442 / 69 conP: 0.007 NO-CATH VNG01631 cluster05 -> 1rypG0 7.0127434 244 / 69 conP: 0.078 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, --end-- VNG0167h one-of-top-five-correct: 0.291860273759936 CThresh: 3.314349 75 best_is: cluster15 VNG0167h cluster00 -> 1lla01 6.7499816 357 / 51 conP: 0.008 CATH-ID: 1.10.639.10 Hemocyanin (subunit type ii) VNG0167h cluster01 -> 1fjhA0 5.3602307 236 / 51 conP: 0.027 CATH-ID: 3.40.50.720 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase. Chain: a, b. S VNG0167h cluster02 -> 119l00 5.8234810 162 / 51 conP: 0.079 CATH-ID: 1.10.530.40 Lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, a VNG0167h cluster03 -> 1yrgA0 6.5183565 343 / 51 conP: 0.009 CATH-ID: 3.80.10.10 Gtpase-activating protein rna1_schpo. Chain: a, b. Synonym: rna1p. Ran VNG0167h cluster04 -> 1jehA 4.6357506 478 / 51 conP: 0.001 NO-CATH VNG0167h cluster15 -> 1cy5A0 7.2132319 92 / 51 conP: 0.252 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re --end-- VNG0170c one-of-top-five-correct: 0.548437159579296 CThresh: 4.939297 75 best_is: cluster03 VNG0170c cluster00 -> 1dceB0 6.2803302 329 / 120 conP: 0.129 CATH-ID: 1.50.10.40 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG0170c cluster01 -> 2tct01 7.6144395 65 / 120 conP: 0.503 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG0170c cluster02 -> 2tct01 7.8298290 65 / 120 conP: 0.519 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG0170c cluster03 -> 2tct01 9.3375551 65 / 120 conP: 0.625 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG0170c cluster04 -> 1uaaA2 6.8162340 74 / 120 conP: 0.433 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- --end-- VNG01742 one-of-top-five-correct: 0.331214863096429 CThresh: 7.543888 25 best_is: cluster15 VNG01742 cluster00 -> 1hjrA0 7.2213650 158 / 117 conP: 0.218 CATH-ID: 3.30.420.10 Holliday junction resolvase (ruvc) VNG01742 cluster01 -> 1qrjB1 7.3095954 114 / 117 conP: 0.272 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG01742 cluster02 -> 1aua01 5.4517962 213 / 117 conP: 0.108 CATH-ID: 3.40.525.10 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG01742 cluster03 -> 1xib00 5.7473480 388 / 117 conP: 0.044 CATH-ID: 3.20.20.150 D-xylose isomerase (ph 7.4) VNG01742 cluster04 -> 1mroA3 7.2904416 227 / 117 conP: 0.159 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG01742 cluster15 -> 1mml02 8.1313356 146 / 117 conP: 0.281 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes --end-- VNG01760 one-of-top-five-correct: 0.404238410736797 CThresh: 3.958117 75 best_is: cluster08 VNG01760 cluster00 -> 1ibrB0 5.5668870 458 / 68 conP: 0.006 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG01760 cluster01 -> 1cy5A0 7.7776607 92 / 68 conP: 0.345 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re VNG01760 cluster02 -> 1nkl00 6.4018932 78 / 68 conP: 0.291 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG01760 cluster03 -> 2tpt01 6.4168118 107 / 68 conP: 0.234 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG01760 cluster04 -> 1thg00 5.6747251 544 / 68 conP: 0.003 CATH-ID: 3.40.50.950 Lipase triacylglycerol hydrolase VNG01760 cluster08 -> 1hyp00 8.4828487 75 / 68 conP: 0.435 CATH-ID: 1.10.110.10 Hydrophobic protein from soybean --end-- VNG01811 one-of-top-five-correct: 0.541379052179319 CThresh: 4.137027 75 best_is: cluster12 VNG01811 cluster00 -> 1e7aA5 8.0655558 112 / 76 conP: 0.348 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG01811 cluster01 -> 1bia02 7.0476996 181 / 76 conP: 0.174 CATH-ID: 3.30.930.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG01811 cluster02 -> 1c3qA0 7.9751366 272 / 76 conP: 0.106 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG01811 cluster03 -> 1k5hA 9.0920344 398 / 76 conP: 0.049 NO-CATH VNG01811 cluster04 -> 1c3qA0 8.1805971 272 / 76 conP: 0.112 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG01811 cluster12 -> 1e7aA5 9.8976969 112 / 76 conP: 0.475 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG01901 one-of-top-five-correct: 0.466847592950641 CThresh: 3.376650 75 best_is: cluster05 VNG01901 cluster00 -> 1vnc01 7.2453751 176 / 79 conP: 0.231 CATH-ID: 1.20.144.10 Vanadium-containing chloroperoxidase. Chain: null. Ec: 1.11.1.10 VNG01901 cluster01 -> 1ad600 7.0405547 185 / 79 conP: 0.208 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG01901 cluster02 -> 2sas00 7.4484410 185 / 79 conP: 0.228 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein (iso type ii) VNG01901 cluster03 -> 1ad600 7.4394910 185 / 79 conP: 0.227 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG01901 cluster04 -> 1efdN2 7.4484410 171 / 79 conP: 0.250 CATH-ID: 3.90.630.10 Ferrichrome-binding periplasmic protein. Chain: n. Engineered: yes VNG01901 cluster05 -> 2sas00 8.6668368 185 / 79 conP: 0.295 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein (iso type ii) --end-- VNG0194h one-of-top-five-correct: 0.330490540162456 CThresh: 2.015851 100 best_is: cluster07 VNG0194h cluster00 -> 1g4aA0 7.0498917 173 / 54 conP: 0.142 CATH-ID: 3.60.20.10 Atp-dependent hsl protease atp-binding subunit hslu. Chain: e, f. Syno VNG0194h cluster01 -> 1a6q01 6.4500044 294 / 54 conP: 0.028 CATH-ID: 3.60.40.10 Phosphatase 2c. Chain: null. Engineered: yes VNG0194h cluster02 -> 2pii00 6.1390610 112 / 54 conP: 0.219 CATH-ID: 3.30.70.120 Pii. Chain: null. Synonym: glnb product. Engineered: yes VNG0194h cluster03 -> 1g4aA0 6.1390610 173 / 54 conP: 0.113 CATH-ID: 3.60.20.10 Atp-dependent hsl protease atp-binding subunit hslu. Chain: e, f. Syno VNG0194h cluster04 -> 1dceA1 6.2252623 317 / 54 conP: 0.020 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG0194h cluster07 -> 1ap700 7.0498917 168 / 54 conP: 0.150 CATH-ID: 1.25.40.20 P19-ink4d. Chain: null. Synonym: cyclin dependent kinase 4 inhibitor d --end-- VNG0196h one-of-top-five-correct: 0.482482967329664 CThresh: 5.124926 75 best_is: cluster13 VNG0196h cluster00 -> 1azsC2 5.2856856 115 / 85 conP: 0.181 CATH-ID: 1.10.400.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG0196h cluster01 -> 1azsC2 5.8717074 115 / 85 conP: 0.208 CATH-ID: 1.10.400.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG0196h cluster02 -> 1trlA0 6.6655592 62 / 85 conP: 0.338 CATH-ID: 1.10.390.10 Thermolysin fragment 255 - 316 (nmr, 8 structures) VNG0196h cluster03 -> 1qgkA 5.8428570 876 / 85 conP: 0.000 NO-CATH VNG0196h cluster04 -> 1fq1A0 6.4386783 183 / 85 conP: 0.150 CATH-ID: 3.90.190.10 Cyclin-dependent kinase inhibitor 3. Chain: a. Engineered: yes. Mutati VNG0196h cluster13 -> 2a3dA0 9.4947419 73 / 85 conP: 0.513 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG01970 one-of-top-five-correct: 0.296658416275782 CThresh: 6.270199 75 best_is: cluster16 VNG01970 cluster00 -> 1ba500 6.9488945 53 / 84 conP: 0.313 CATH-ID: 1.10.10.60 Htrf1. Chain: null. Fragment: DNA-binding domain. Synonym: telomeric r VNG01970 cluster01 -> 1bob03 6.3667687 54 / 84 conP: 0.276 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG01970 cluster02 -> 1c4kA3 5.5072573 180 / 84 conP: 0.094 CATH-ID: 3.30.70.160 Ornithine decarboxylase. Chain: a. Engineered: yes. Mutation: yes VNG01970 cluster03 -> 1lylA2 6.2709937 342 / 84 conP: 0.033 CATH-ID: 3.40.690.10 Lysyl-tRNA synthetase (lysu). Chain: a, b, c. Lysine. Chain: x, y, z VNG01970 cluster04 -> 1ba500 6.9488945 53 / 84 conP: 0.313 CATH-ID: 1.10.10.60 Htrf1. Chain: null. Fragment: DNA-binding domain. Synonym: telomeric r VNG01970 cluster16 -> 1evyA 7.8655688 346 / 84 conP: 0.049 NO-CATH --end-- VNG0199h one-of-top-five-correct: 0.405665104594935 CThresh: 8.495285 25 best_is: cluster13 VNG0199h cluster00 -> 1hwxA1 6.7499816 51 / 121 conP: 0.279 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG0199h cluster01 -> 1a1w00 6.0467787 83 / 121 conP: 0.208 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG0199h cluster02 -> 1hw7A 4.5865844 229 / 121 conP: 0.069 NO-CATH VNG0199h cluster03 -> 1bhmA0 5.4898276 198 / 121 conP: 0.103 CATH-ID: 3.40.91.20 Endonuclease bamhi. Chain: a, b. Synonym: r. Bamhi. Engineered: yes. D VNG0199h cluster04 -> 1pjcA2 7.0207366 176 / 121 conP: 0.169 CATH-ID: 3.40.50.720 L-alanine dehydrogenase. Chain: a. Engineered: yes. Biological_unit: h VNG0199h cluster13 -> 1ns1A0 9.3498790 73 / 121 conP: 0.419 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re --end-- VNG0205h one-of-top-five-correct: 0.370395504133393 CThresh: 6.884072 75 best_is: cluster07 VNG0205h cluster00 -> 1dik05 7.5299106 89 / 94 conP: 0.287 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG0205h cluster01 -> 1mioB2 5.7535576 104 / 94 conP: 0.177 CATH-ID: 3.40.50.10 Nitrogenase molybdenum-iron protein VNG0205h cluster02 -> 1avpA0 5.9418820 204 / 94 conP: 0.097 CATH-ID: 3.40.395.10 Adenoviral proteinase. Chain: a. Fragment: main. Synonym: avp. Enginee VNG0205h cluster03 -> 1hx8A 7.6368015 270 / 94 conP: 0.097 NO-CATH VNG0205h cluster04 -> 1jfgA 6.8617976 354 / 94 conP: 0.044 NO-CATH VNG0205h cluster07 -> 1dkxA2 8.8271612 80 / 94 conP: 0.385 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su --end-- VNG0207h one-of-top-five-correct: 0.43978097910891 CThresh: 5.596066 75 best_is: cluster02 VNG0207h cluster00 -> 1mbe00 6.6968813 52 / 117 conP: 0.413 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG0207h cluster01 -> 1idy00 6.5262976 54 / 117 conP: 0.398 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG0207h cluster02 -> 1ekrA0 8.5090209 143 / 117 conP: 0.407 CATH-ID: 3.30.70.640 Molybdenum cofactor biosynthesis protein c. Chain: a. Engineered: yes. VNG0207h cluster03 -> 1mbe00 6.9271692 52 / 117 conP: 0.429 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG0207h cluster04 -> 1mbe00 6.6968813 52 / 117 conP: 0.413 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other --end-- VNG0210h one-of-top-five-correct: 0.420076865821428 CThresh: 2.392391 100 best_is: cluster11 VNG0210h cluster00 -> 1aisB1 6.7108836 99 / 66 conP: 0.329 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG0210h cluster01 -> 1bu2A2 6.7108836 102 / 66 conP: 0.322 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0210h cluster02 -> 1vin01 7.5684895 139 / 66 conP: 0.292 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG0210h cluster03 -> 1df0A 6.9252851 624 / 66 conP: 0.002 NO-CATH VNG0210h cluster04 -> 1rthA3 6.7702453 94 / 66 conP: 0.345 CATH-ID: 3.90.840.10 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere VNG0210h cluster11 -> 1fnnA1 7.9972924 101 / 66 conP: 0.411 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer --end-- VNG02130 one-of-top-five-correct: 0.281425440925986 CThresh: 6.949003 75 best_is: cluster02 VNG02130 cluster00 -> 1lmb30 6.4871374 87 / 96 conP: 0.234 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG02130 cluster01 -> 1aci00 6.8641407 76 / 96 conP: 0.270 CATH-ID: 1.10.10.250 L11 ribosomal protein. Chain: null. Fragment: c-terminal domain, 76 re VNG02130 cluster02 -> 1jud02 7.6972042 75 / 96 conP: 0.321 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG02130 cluster03 -> 1gejA0 7.0767699 399 / 96 conP: 0.036 CATH-ID: 1.10.630.10 Cytochrome p450 55a1. Chain: a. Engineered: yes VNG02130 cluster04 -> 1babA0 5.3542454 142 / 96 conP: 0.129 CATH-ID: 1.10.490.10 Hemoglobin thionville alpha chain mutant with val 1 replaced by glu an --end-- VNG0216h one-of-top-five-correct: 0.417811787214936 CThresh: 4.537349 75 best_is: cluster15 VNG0216h cluster00 -> 1ah100.man 5.5668870 128 / 68 conP: 0.144 NO-CATH VNG0216h cluster01 -> 1joeA 6.6990343 148 / 68 conP: 0.160 NO-CATH VNG0216h cluster02 -> 1f3vA0 7.4661194 158 / 68 conP: 0.176 CATH-ID: 3.30.70.680 Tumor necrosis factor receptor type 1 associated death domain protein. VNG0216h cluster03 -> 1ap800 8.1166614 213 / 68 conP: 0.128 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes VNG0216h cluster04 -> 4rhn00 5.5668870 115 / 68 conP: 0.162 CATH-ID: 3.30.428.10 Histidine triad nucleotide-binding protein. Chain: null. Synonym: hint VNG0216h cluster15 -> 2ifeA0 8.8990398 91 / 68 conP: 0.392 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin --end-- VNG02222 one-of-top-five-correct: 0.565299120992707 CThresh: 4.909440 75 best_is: cluster10 VNG02222 cluster00 -> 1thm00 7.7295335 279 / 109 conP: 0.192 CATH-ID: 3.40.50.200 Thermitase VNG02222 cluster01 -> 1f06A1 8.6878408 168 / 109 conP: 0.390 CATH-ID: 3.40.50.720 Meso-diaminopimelate d-dehydrogenase. Chain: a, b. Engineered: yes VNG02222 cluster02 -> 1moq01 8.5612476 218 / 109 conP: 0.309 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG02222 cluster03 -> 1ybvA0 7.4897792 270 / 109 conP: 0.191 CATH-ID: 3.40.50.720 Trihydroxynaphthalene reductase. Chain: a, b. Synonym: naphthol reduct VNG02222 cluster04 -> 1jfrA0 7.8247685 260 / 109 conP: 0.217 CATH-ID: 3.40.50.950 Lipase. Chain: a, b. Engineered: yes VNG02222 cluster10 -> 1e79E2 9.7615704 276 / 109 conP: 0.304 CATH-ID: 3.40.50.300 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin --end-- VNG0227h one-of-top-five-correct: 0.175306609148694 CThresh: 6.976274 55 best_is: cluster06 VNG0227h cluster00 -> 1e8cA 5.4551646 482 / 86 conP: 0.008 NO-CATH VNG0227h cluster01 -> 1qqjA 4.4817321 416 / 86 conP: 0.010 NO-CATH VNG0227h cluster02 -> 1jehA 5.3742703 478 / 86 conP: 0.008 NO-CATH VNG0227h cluster03 -> 1gcyA2 5.5958156 56 / 86 conP: 0.208 CATH-ID: 2.60.40.1180 Glucan 1,4-alpha-maltotetrahydrolase. Chain: a. Engineered: yes VNG0227h cluster04 -> 1fruA1 6.0117153 177 / 86 conP: 0.100 CATH-ID: 3.30.500.10 Fc (igg) receptor (neonatal) (orthorhombic crystal form) (fcrn) (extra VNG0227h cluster06 -> 1hnr00 6.2644251 47 / 86 conP: 0.255 CATH-ID: 4.10.430.10 H-ns (DNA-binding domain) (nmr, minimized average structure) --end-- VNG0233h one-of-top-five-correct: 0.715645521188148 CThresh: 2.441446 100 best_is: cluster03 VNG0233h cluster00 -> 1otgA0 10.544158 125 / 78 conP: 0.597 CATH-ID: 3.30.457.20 5-carboxymethyl-2-hydroxymuconate isomerase. Chain: a, b, c. Engineere VNG0233h cluster01 -> 1e8gA3 10.067138 231 / 78 conP: 0.333 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, VNG0233h cluster02 -> 1otgA0 9.9326050 125 / 78 conP: 0.554 CATH-ID: 3.30.457.20 5-carboxymethyl-2-hydroxymuconate isomerase. Chain: a, b, c. Engineere VNG0233h cluster03 -> 1bia02 11.155712 181 / 78 conP: 0.517 CATH-ID: 3.30.930.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0233h cluster04 -> 1e8gA3 10.411055 231 / 78 conP: 0.355 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, --end-- VNG0237h one-of-top-five-correct: 0.183609716596381 CThresh: 3.916410 75 best_is: cluster08 VNG0237h cluster00 -> 1qmpA0 5.7666012 125 / 43 conP: 0.078 CATH-ID: 3.40.50.3000 Spo0a. Chain: a, b, c, d. Fragment: receiver domain. Engineered: yes. VNG0237h cluster01 -> 1cr4A0 4.5483231 243 / 43 conP: 0.009 CATH-ID: 3.40.50.300 DNA primase/helicase. Chain: a. Fragment: helicase domain. Engineered: VNG0237h cluster02 -> 1eulA4 5.2792900 156 / 43 conP: 0.043 CATH-ID: 3.40.50.1000 Calcium-transporting atpase sarcoplasmic reticulum type, fast twitch s VNG0237h cluster03 -> 1g2iA0 5.0356344 162 / 43 conP: 0.036 CATH-ID: 3.40.50.1090 Protease i. Chain: a, b, c. Engineered: yes VNG0237h cluster04 -> 1ad202 4.7919787 93 / 43 conP: 0.097 CATH-ID: 3.40.50.790 Ribosomal protein l1. Chain: null. Synonym: tl2. Engineered: yes. Muta VNG0237h cluster08 -> 1uroA0 6.0102569 357 / 43 conP: 0.002 CATH-ID: 3.20.20.210 Uroporphyrinogen decarboxylase. Chain: a. Synonym: uro-d, urod. Engine --end-- VNG0238h one-of-top-five-correct: 0.476452153618104 CThresh: 4.928962 75 best_is: cluster09 VNG0238h cluster00 -> 1bu2A1 6.0920640 112 / 71 conP: 0.185 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0238h cluster01 -> 1qqeA0 8.2743531 281 / 71 conP: 0.075 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG0238h cluster02 -> 1ayx00 7.9806556 492 / 71 conP: 0.009 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes VNG0238h cluster03 -> 1bu2A1 6.9320001 112 / 71 conP: 0.224 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0238h cluster04 -> 1aoa01 6.0930756 118 / 71 conP: 0.176 CATH-ID: 1.10.418.10 T-fimbrin. Chain: null. Fragment: abd1 VNG0238h cluster09 -> 1e7aA6 9.6585045 78 / 71 conP: 0.470 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG0239c one-of-top-five-correct: 0.253211734624103 CThresh: 6.948806 31 best_is: cluster05 VNG0239c cluster00 -> 1bowA0 4.9176650 143 / 104 conP: 0.129 CATH-ID: 3.20.80.10 Multidrug-efflux transporter 1 regulator bmrr. Chain: a. Fragment: mul VNG0239c cluster01 -> 1b0zA2 6.1032205 184 / 104 conP: 0.136 CATH-ID: 3.40.50.1890 Phosphoglucose isomerase. Chain: a. Synonym: glucose-6-phosphate isome VNG0239c cluster02 -> 3daaA2 4.8389603 159 / 104 conP: 0.115 CATH-ID: 3.20.10.10 D-amino acid aminotransferase. Chain: a, b. Engineered: yes. Biologica VNG0239c cluster03 -> 1colA0 5.1693300 197 / 104 conP: 0.100 CATH-ID: 1.10.490.30 Colicin A (c-terminal domain) (pore-forming domain) VNG0239c cluster04 -> 1qmmA5 6.2199194 194 / 104 conP: 0.133 CATH-ID: 1.10.1070.11 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG0239c cluster05 -> 1bebA0 7.1203219 156 / 104 conP: 0.204 CATH-ID: 2.40.128.20 Beta-lactoglobulin. Chain: a, b. Biological_unit: predominantly dimeri --end-- VNG02400 one-of-top-five-correct: 0.371311866783542 CThresh: 6.994962 33 best_is: cluster09 VNG02400 cluster00 -> 1ho1C0 6.8532064 242 / 111 conP: 0.132 CATH-ID: 3.20.20.320 Pyridoxine 5'-phosphate synthase. Chain: a, b, c, d. Synonym: pyridoxa VNG02400 cluster01 -> 1b7eA1 7.0381593 246 / 111 conP: 0.136 CATH-ID: 3.90.350.10 Transposase inhibitor protein from tn5. Chain: a. Engineered: yes VNG02400 cluster02 -> 1smaA3 6.7697739 81 / 111 conP: 0.292 CATH-ID: 2.60.40.1180 Maltogenic amylase. Chain: a, b. Fragment: n-domain, barrel, c-domain VNG02400 cluster03 -> 1schA1 5.7313955 158 / 111 conP: 0.158 CATH-ID: 1.10.520.10 Peanut peroxidase, major cationic isozyme. Chain: a, b. Synonym: pnp. VNG02400 cluster04 -> 1ad600 6.1208067 185 / 111 conP: 0.150 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG02400 cluster09 -> 1ivyA0 8.5011059 452 / 111 conP: 0.061 CATH-ID: 3.40.50.950 Human protective protein. Chain: a, b. Synonym: protective protein/cat --end-- VNG02401 one-of-top-five-correct: 0.374025158191717 CThresh: 6.912118 75 best_is: cluster01 VNG02401 cluster00 -> 1e25A0 6.1891715 270 / 113 conP: 0.101 CATH-ID: 3.40.710.10 Extended-spectrum beta-lactamase per-1. Chain: a. Engineered: yes. Mut VNG02401 cluster01 -> 1av401 8.4497663 87 / 113 conP: 0.401 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG02401 cluster02 -> 1fsz01 5.7691899 212 / 113 conP: 0.125 CATH-ID: 3.40.50.1440 Ftsz. Chain: null. Synonym: sulb. Engineered: yes VNG02401 cluster03 -> 1fsz01 5.8311511 212 / 113 conP: 0.127 CATH-ID: 3.40.50.1440 Ftsz. Chain: null. Synonym: sulb. Engineered: yes VNG02401 cluster04 -> 1auoA0 6.0750166 218 / 113 conP: 0.131 CATH-ID: 3.40.50.950 Carboxylesterase. Chain: a, b. Engineered: yes. Biological_unit: dimer --end-- VNG02430 one-of-top-five-correct: 0.131052302585522 CThresh: 8.651814 25 best_is: cluster07 VNG02430 cluster00 -> 1hdmB1 4.2066614 84 / 112 conP: 0.118 CATH-ID: 3.10.320.10 Class ii histocompatibility antigen, m alpha chain. Chain: a. Fragment VNG02430 cluster01 -> 1gtxA1 4.6369871 167 / 112 conP: 0.083 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG02430 cluster02 -> 1hlm00 4.9518403 158 / 112 conP: 0.095 CATH-ID: 1.10.490.10 Hemoglobin (cyano-met) (sea cucumber) VNG02430 cluster03 -> 1a0i01 5.3673824 230 / 112 conP: 0.070 CATH-ID: 3.90.410.10 DNA ligase. Chain: null. Engineered: yes. Mutation: m2v VNG02430 cluster04 -> 1dm9A0 3.5359119 104 / 112 conP: 0.089 CATH-ID: 3.10.290.10 Hypothetical 15.5 kd protein in mrca-pcka intergenic region. Chain: a, VNG02430 cluster07 -> 1euhA1 5.4927076 274 / 112 conP: 0.056 CATH-ID: 3.40.605.10 NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrog --end-- VNG02470 one-of-top-five-correct: 0.363784192809372 CThresh: 6.018209 75 best_is: cluster06 VNG02470 cluster00 -> 1lmb30 7.6609070 87 / 117 conP: 0.406 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG02470 cluster01 -> 1tc3C0 5.8234810 51 / 117 conP: 0.333 CATH-ID: 1.10.10.60 DNA. Chain: a, b. Engineered: yes. Tc3 transposase. Chain: c. Fragment VNG02470 cluster02 -> 1fadA0 5.7635258 95 / 117 conP: 0.274 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG02470 cluster03 -> 1kdxA0 5.9636418 81 / 117 conP: 0.303 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG02470 cluster04 -> 1octC1 6.4525499 71 / 117 conP: 0.347 CATH-ID: 1.10.260.10 Oct-1 (pou domain) VNG02470 cluster06 -> 1octC1 7.8328626 71 / 117 conP: 0.442 CATH-ID: 1.10.260.10 Oct-1 (pou domain) --end-- VNG02550 one-of-top-five-correct: 0.32333009725056 CThresh: 4.458191 75 best_is: cluster15 VNG02550 cluster00 -> 1l0bA 4.8826068 190 / 63 conP: 0.058 NO-CATH VNG02550 cluster01 -> 1u2fA0 6.6220014 90 / 63 conP: 0.236 CATH-ID: 3.30.70.330 Splicing factor u2af 65 kd subunit. Chain: a. Fragment: first RNA-bind VNG02550 cluster02 -> 1pfkA1 6.4045771 189 / 63 conP: 0.088 CATH-ID: 3.40.50.450 Phosphofructokinase (r-state) complex with fructose-1,6-bisphosphate a VNG02550 cluster03 -> 1ay200 5.9697284 158 / 63 conP: 0.107 CATH-ID: 3.30.700.10 Type 4 pilin. Chain: null. Synonym: fimbriae. Biological_unit: fiber-f VNG02550 cluster04 -> 1sacA0 5.7523041 204 / 63 conP: 0.064 CATH-ID: 2.60.120.60 Serum amyloid p component (sap) VNG02550 cluster15 -> 119l00 7.8634976 162 / 63 conP: 0.166 CATH-ID: 1.10.530.40 Lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, a --end-- VNG0258h one-of-top-five-correct: 0.289321623767547 CThresh: 7.876953 25 best_is: cluster18 VNG0258h cluster00 -> 1hy1A3 6.4750260 72 / 115 conP: 0.255 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a VNG0258h cluster01 -> 1gkxA 5.3057594 308 / 115 conP: 0.055 NO-CATH VNG0258h cluster02 -> 1vin02 6.1486661 113 / 115 conP: 0.195 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG0258h cluster03 -> 1ec5A0 6.9175592 48 / 115 conP: 0.310 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG0258h cluster04 -> 1tfe02 5.2590331 45 / 115 conP: 0.221 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG0258h cluster18 -> 1hb6A 7.7914025 86 / 115 conP: 0.315 NO-CATH --end-- VNG0261h one-of-top-five-correct: 0.218521691203212 CThresh: 4.634601 75 best_is: cluster04 VNG0261h cluster00 -> 1ab401 5.1286056 271 / 51 conP: 0.012 CATH-ID: 3.90.199.10 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol VNG0261h cluster01 -> 1g3sA 5.5918559 212 / 51 conP: 0.029 NO-CATH VNG0261h cluster02 -> 1i9tA0 4.4337301 189 / 51 conP: 0.029 CATH-ID: 3.90.190.10 mRNA capping enzyme. Chain: a. Fragment: tpase domain (residues 1-210) VNG0261h cluster03 -> 1a36A4 4.4337301 96 / 51 conP: 0.096 CATH-ID: 1.10.132.10 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG0261h cluster04 -> 1knyA2 6.7499816 128 / 51 conP: 0.118 CATH-ID: 1.20.30.20 Kanamycin nucleotidyltransferase. Chain: a, b. Synonym: kntase. Engine --end-- VNG02621 one-of-top-five-correct: 0.302671316721589 CThresh: 3.001925 97 best_is: cluster10 VNG02621 cluster00 -> 1e8xA3 6.1374138 185 / 51 conP: 0.069 CATH-ID: 1.25.40.110 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG02621 cluster01 -> 1d5rA1 5.8234810 174 / 51 conP: 0.073 CATH-ID: 3.90.190.10 Phosphoinositide phosphotase pten. Chain: a. Fragment: residues 7-353. VNG02621 cluster02 -> 1a36A4 5.3602307 96 / 51 conP: 0.167 CATH-ID: 1.10.132.10 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG02621 cluster03 -> 1dik05 6.2867313 89 / 51 conP: 0.224 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG02621 cluster04 -> 1a36A4 6.0551062 96 / 51 conP: 0.197 CATH-ID: 1.10.132.10 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG02621 cluster10 -> 1gca02 7.2132319 161 / 51 conP: 0.123 CATH-ID: 3.40.50.2500 Glucose/galactose-binding protein complex with galactose --end-- VNG02641 one-of-top-five-correct: 0.333251111340706 CThresh: 6.992578 36 best_is: cluster09 VNG02641 cluster00 -> 1tfe02 5.8969285 45 / 99 conP: 0.263 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG02641 cluster01 -> 1utg00 4.8656881 70 / 99 conP: 0.182 CATH-ID: 1.10.210.10 Uteroglobin (oxidized) VNG02641 cluster02 -> 1qqtA3 5.8514305 138 / 99 conP: 0.155 CATH-ID: 1.10.730.10 Methionyl-tRNA synthetase. Chain: a. Fragment: truncated fragment, res VNG02641 cluster03 -> 1hy1A3 7.5192609 72 / 99 conP: 0.321 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a VNG02641 cluster04 -> 1fz1F2 7.6860523 73 / 99 conP: 0.330 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: VNG02641 cluster09 -> 1qaxA2 8.3163042 260 / 99 conP: 0.136 CATH-ID: 3.90.770.10 3-hydroxy-3-methylglutaryl-coenzyme a reductase. Chain: a, b. Engineer --end-- VNG02642 one-of-top-five-correct: 0.21306370208604 CThresh: 5.629035 75 best_is: cluster10 VNG02642 cluster00 -> 1jweA0 4.5701080 114 / 63 conP: 0.091 CATH-ID: 1.10.860.10 Dnab helicase. Chain: a. Fragment: n-terminal domain. Engineered: yes. VNG02642 cluster01 -> 1h8vA0 6.6220014 217 / 63 conP: 0.055 CATH-ID: 2.60.120.180 Endo-beta-1,4-glucanase. Chain: a, b, c, d, e, f. Fragment: residues 1 VNG02642 cluster02 -> 1bpb02 5.3174554 114 / 63 conP: 0.111 CATH-ID: 3.30.460.10 DNA polymerase beta (beta polymerase) (apo, 31kd domain) VNG02642 cluster03 -> 1lddA 5.8308778 74 / 63 conP: 0.184 NO-CATH VNG02642 cluster04 -> 1fts01 4.6651824 84 / 63 conP: 0.126 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG02642 cluster10 -> 1c4xA0 6.8394257 281 / 63 conP: 0.029 CATH-ID: 3.40.50.950 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Chain: a. Synonym --end-- VNG02711 one-of-top-five-correct: 0.503451487001558 CThresh: 4.844864 75 best_is: cluster18 VNG02711 cluster00 -> 1c5200 7.5924436 131 / 108 conP: 0.372 CATH-ID: 1.10.1250.10 Cytochrome-c552. Chain: null. Other_details: oxidized state (fe+++) VNG02711 cluster01 -> 1mroA3 8.8018472 227 / 108 conP: 0.311 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG02711 cluster02 -> 1hbg00 7.9996163 147 / 108 conP: 0.375 CATH-ID: 1.10.490.10 Hemoglobin (carbon monoxy) VNG02711 cluster03 -> 1rdr03 7.1728400 81 / 108 conP: 0.421 CATH-ID: 1.20.960.20 Poliovirus 3d polymerase. Chain: null. Engineered: yes VNG02711 cluster04 -> 1ecmA0 6.7571881 91 / 108 conP: 0.376 CATH-ID: 1.20.59.10 Endo-oxabicyclic transition state analogue. Chain: a, b. Domain: chori VNG02711 cluster18 -> 1ecmA0 9.0737013 91 / 108 conP: 0.541 CATH-ID: 1.20.59.10 Endo-oxabicyclic transition state analogue. Chain: a, b. Domain: chori --end-- VNG02741 one-of-top-five-correct: 0.352082280981925 CThresh: 3.444346 75 best_is: cluster11 VNG02741 cluster00 -> 1a6f00 7.2775994 113 / 54 conP: 0.217 CATH-ID: 3.30.230.10 Ribonuclease p protein. Chain: null. Synonym: rnase p protein. Enginee VNG02741 cluster01 -> 1de6A0 7.5053070 416 / 54 conP: 0.006 CATH-ID: 3.20.20.310 L-rhamnose isomerase. Chain: a, b, c, d. Engineered: yes VNG02741 cluster02 -> 1a6f00 7.1915739 113 / 54 conP: 0.213 CATH-ID: 3.30.230.10 Ribonuclease p protein. Chain: null. Synonym: rnase p protein. Enginee VNG02741 cluster03 -> 1a6f00 6.8143219 113 / 54 conP: 0.195 CATH-ID: 3.30.230.10 Ribonuclease p protein. Chain: null. Synonym: rnase p protein. Enginee VNG02741 cluster04 -> 2chsA0 6.8221840 114 / 54 conP: 0.194 CATH-ID: 3.30.70.130 Chorismate mutase VNG02741 cluster11 -> 1uroA0 7.9607224 357 / 54 conP: 0.014 CATH-ID: 3.20.20.210 Uroporphyrinogen decarboxylase. Chain: a. Synonym: uro-d, urod. Engine --end-- VNG0282h one-of-top-five-correct: 0.204386015630811 CThresh: 4.125019 75 best_is: cluster16 VNG0282h cluster00 -> 1znbA0 5.5918559 228 / 51 conP: 0.026 CATH-ID: 3.60.15.10 Metallo-beta-lactamase. Chain: a, b. Synonym: class b beta-lactamase. VNG0282h cluster01 -> 1ik3A 5.1286056 836 / 51 conP: 0.000 NO-CATH VNG0282h cluster02 -> 1paz00 5.5918559 120 / 51 conP: 0.107 CATH-ID: 2.60.40.420 Pseudoazurin (oxidized cu ++ at p H 6.8) VNG0282h cluster03 -> 1gajA0 4.5252285 253 / 51 conP: 0.014 CATH-ID: 3.40.50.300 High-affinity branched chain amino acid transport atp-binding protein. VNG0282h cluster04 -> 1gg4A 5.5918559 430 / 51 conP: 0.002 NO-CATH VNG0282h cluster16 -> 1gg4A 6.2867313 430 / 51 conP: 0.002 NO-CATH --end-- VNG0285c one-of-top-five-correct: 0.497086628851934 CThresh: 6.323512 75 best_is: cluster01 VNG0285c cluster00 -> 1hz6A0 7.0965607 67 / 128 conP: 0.406 CATH-ID: 3.10.20.210 Protein l. Chain: a, b, c. Fragment: b1 domain. Synonym: ig kappa ligh VNG0285c cluster01 -> 1mnmA 9.2191779 85 / 128 conP: 0.533 NO-CATH VNG0285c cluster02 -> 1be3B1 6.7550033 215 / 128 conP: 0.216 CATH-ID: 3.30.830.10 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG0285c cluster03 -> 1dqaA3 9.1869616 117 / 128 conP: 0.487 CATH-ID: 3.30.70.420 Hmg-coa reductase. Chain: a, b, c, d. Fragment: catalytic portion. Eng VNG0285c cluster04 -> 1sesA2 6.0576550 318 / 128 conP: 0.114 CATH-ID: 3.40.690.10 Seryl-tRNA synthetase (serine-tRNA ligase) complexed with seryl-hydrox --end-- VNG02860 one-of-top-five-correct: 0.318064243482305 CThresh: 7.326520 25 best_is: cluster02 VNG02860 cluster00 -> 1eemA2 7.2530516 115 / 106 conP: 0.249 CATH-ID: 1.20.1050.10 Glutathione-s-transferase. Chain: a. Engineered: yes VNG02860 cluster01 -> 1mdl01 6.1948627 126 / 106 conP: 0.185 CATH-ID: 3.30.390.10 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r VNG02860 cluster02 -> 1hbg00 8.1190145 147 / 106 conP: 0.256 CATH-ID: 1.10.490.10 Hemoglobin (carbon monoxy) VNG02860 cluster03 -> 1rypB0 6.3269154 250 / 106 conP: 0.094 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG02860 cluster04 -> 1a7602 5.4153240 60 / 106 conP: 0.219 CATH-ID: 1.10.150.20 Flap endonuclease-1 protein. Chain: null --end-- VNG0287h one-of-top-five-correct: 0.224245925153725 CThresh: 6.900653 75 best_is: cluster08 VNG0287h cluster00 -> 1yrnA0 6.6258584 49 / 90 conP: 0.285 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG0287h cluster01 -> 1d0nA6 4.8624524 127 / 90 conP: 0.115 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG0287h cluster02 -> 1qqgA1 5.5244352 103 / 90 conP: 0.160 CATH-ID: 2.30.29.30 Insulin receptor substrate 1. Chain: a, b. Fragment: ph-ptb (n-termina VNG0287h cluster03 -> 2pia03 6.4228475 96 / 90 conP: 0.207 CATH-ID: 3.10.20.30 Phthalate dioxygenase reductase VNG0287h cluster04 -> 1fsz01 5.7018876 212 / 90 conP: 0.079 CATH-ID: 3.40.50.1440 Ftsz. Chain: null. Synonym: sulb. Engineered: yes VNG0287h cluster08 -> 1dj2A2 6.9805284 99 / 90 conP: 0.230 CATH-ID: 1.10.300.10 Adenylosuccinate synthetase. Chain: a, b. Engineered: yes --end-- VNG0293h one-of-top-five-correct: 0.481718653172334 CThresh: 3.985770 75 best_is: cluster00 VNG0293h cluster00 -> 1ddbA0 8.9014314 195 / 88 conP: 0.312 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG0293h cluster01 -> 1c9bA2 7.1451597 106 / 88 conP: 0.357 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG0293h cluster02 -> 1yrnA0 6.1399515 49 / 88 conP: 0.395 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG0293h cluster03 -> 1bia01 7.0121161 64 / 88 conP: 0.427 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0293h cluster04 -> 1pdnC1 6.6292930 68 / 88 conP: 0.393 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b --end-- VNG02961 one-of-top-five-correct: 0.322899834116917 CThresh: 8.426929 25 best_is: cluster12 VNG02961 cluster00 -> 8abp02 4.1295990 167 / 128 conP: 0.095 CATH-ID: 3.40.50.2600 L- Arabinose-binding protein (mutant with met 108 replaced by leu) ( M VNG02961 cluster01 -> 1e7aA2 8.1425828 90 / 128 conP: 0.336 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG02961 cluster02 -> 1cf7B0 5.1661440 82 / 128 conP: 0.183 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG02961 cluster03 -> 1qo0D2 5.4474831 46 / 128 conP: 0.228 CATH-ID: 1.10.15.10 Amic. Chain: a, b. Fragment: amide receptor. Engineered: yes. Other_de VNG02961 cluster04 -> 1jkw02 5.0908451 101 / 128 conP: 0.165 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG02961 cluster12 -> 1t7pA4 8.1779003 101 / 128 conP: 0.325 CATH-ID: 1.10.473.10 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi --end-- VNG02970 one-of-top-five-correct: 0.459827109270111 CThresh: 6.865915 75 best_is: cluster10 VNG02970 cluster00 -> 1vhrA0 8.6152348 178 / 84 conP: 0.185 CATH-ID: 3.90.190.10 Human vh1-related dual-specificity phosphatase vhr. Chain: a, b. Synon VNG02970 cluster01 -> 1dtwA0 7.5615109 382 / 84 conP: 0.030 CATH-ID: 3.40.50.970 Branched-chain alpha-keto acid dehydrogenase alpha subunit. Chain: a. VNG02970 cluster02 -> 1nzyA 5.3112533 269 / 84 conP: 0.039 NO-CATH VNG02970 cluster03 -> 1fezA1 6.0716718 178 / 84 conP: 0.098 CATH-ID: 3.40.50.1000 Phosphonoacetaldehyde hydrolase. Chain: a, b, c, d. Engineered: yes VNG02970 cluster04 -> 8abp01 6.6696375 138 / 84 conP: 0.153 CATH-ID: 3.40.50.3100 L- Arabinose-binding protein (mutant with met 108 replaced by leu) ( M VNG02970 cluster10 -> 1thfD0 10.058110 253 / 84 conP: 0.155 CATH-ID: 3.20.20.90 Hisf protein. Chain: d. Fragment: cyclase subunit. Synonym: imidazoleg --end-- VNG02980 one-of-top-five-correct: 0.612926332300481 CThresh: 4.417105 75 best_is: cluster01 VNG02980 cluster00 -> 1esc00 8.5429284 302 / 82 conP: 0.113 CATH-ID: 3.40.50.1110 Esterase. Chain: null VNG02980 cluster01 -> 1gai00 10.692208 472 / 82 conP: 0.053 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc VNG02980 cluster02 -> 1a8rA1 6.9394743 85 / 82 conP: 0.339 CATH-ID: 1.10.286.10 Gtp cyclohydrolase i. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG02980 cluster03 -> 1jkw02 6.9277893 101 / 82 conP: 0.308 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG02980 cluster04 -> 1ecmA0 9.0779726 91 / 82 conP: 0.474 CATH-ID: 1.20.59.10 Endo-oxabicyclic transition state analogue. Chain: a, b. Domain: chori --end-- VNG02981 one-of-top-five-correct: 0.59639438928053 CThresh: 5.925058 75 best_is: cluster04 VNG02981 cluster00 -> 1ecmA0 8.7874429 91 / 117 conP: 0.486 CATH-ID: 1.20.59.10 Endo-oxabicyclic transition state analogue. Chain: a, b. Domain: chori VNG02981 cluster01 -> 1fjgT0 7.7659720 99 / 117 conP: 0.401 CATH-TRUNC VNG02981 cluster02 -> 1fjgT0 7.8516864 99 / 117 conP: 0.407 CATH-TRUNC VNG02981 cluster03 -> 1cbzA1 9.1503697 315 / 117 conP: 0.215 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG02981 cluster04 -> 2a3dA0 10.389771 73 / 117 conP: 0.625 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG0311h one-of-top-five-correct: 0.181410964544513 CThresh: 9.434535 25 best_is: cluster10 VNG0311h cluster00 -> 1dekA2 5.9906695 121 / 132 conP: 0.161 CATH-ID: 1.10.238.70 Deoxynucleoside monophosphate kinase. Chain: a, b. Engineered: yes VNG0311h cluster01 -> 1cpy02 6.0573320 72 / 132 conP: 0.202 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a VNG0311h cluster02 -> 1a0oF0 5.3203619 69 / 132 conP: 0.172 CATH-ID: 3.30.70.400 Chey. Chain: a, c, e, g. Engineered: yes. Chea. Chain: b, d, f, h. Fra VNG0311h cluster03 -> 1e7aA5 5.0686973 112 / 132 conP: 0.134 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG0311h cluster04 -> 1qrjB2 5.4127960 81 / 132 conP: 0.167 CATH-ID: 1.10.1200.30 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG0311h cluster10 -> 1cuk03 6.4458751 48 / 132 conP: 0.244 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes --end-- VNG0312h one-of-top-five-correct: 0.272368237709008 CThresh: 6.960268 31 best_is: cluster00 VNG0312h cluster00 -> 1ocrE0 7.5329298 109 / 98 conP: 0.266 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG0312h cluster01 -> 1rdr03 5.7953092 81 / 98 conP: 0.211 CATH-ID: 1.20.960.20 Poliovirus 3d polymerase. Chain: null. Engineered: yes VNG0312h cluster02 -> 1rypL0 4.5453988 212 / 98 conP: 0.068 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG0312h cluster03 -> 1dpsA0 5.8767511 159 / 98 conP: 0.136 CATH-TRUNC VNG0312h cluster04 -> 1tib00 4.8493663 269 / 98 conP: 0.051 CATH-ID: 3.40.50.950 Lipase (triacylglycerol acylhydrolase) --end-- VNG0319h one-of-top-five-correct: 0.542949999600901 CThresh: 4.546865 75 best_is: cluster02 VNG0319h cluster00 -> 1az902 5.2147154 266 / 79 conP: 0.055 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet VNG0319h cluster01 -> 1abv00 5.4177814 105 / 79 conP: 0.204 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi VNG0319h cluster02 -> 1gxpA 10.032577 103 / 79 conP: 0.497 NO-CATH VNG0319h cluster03 -> 1seiA1 7.3487334 72 / 79 conP: 0.375 CATH-ID: 3.30.70.350 Ribosomal protein s8. Chain: a, b. Engineered: yes VNG0319h cluster04 -> 6mhtA1 7.2453751 229 / 79 conP: 0.126 CATH-ID: 3.40.50.150 Cytosine-specific methyltransferase hhai. Chain: a. Engineered: yes. B --end-- VNG03200 one-of-top-five-correct: 0.320150591251295 CThresh: 6.956687 30 best_is: cluster00 VNG03200 cluster00 -> 1j6vA 7.7954149 146 / 114 conP: 0.279 NO-CATH VNG03200 cluster01 -> 1iqrA 5.9157371 415 / 114 conP: 0.041 NO-CATH VNG03200 cluster02 -> 1diqC0 6.1948600 74 / 114 conP: 0.275 CATH-ID: 1.10.1250.10 P-cresol methylhydroxylase. Chain: a, b. Fragment: flavoprotein subuni VNG03200 cluster03 -> 14psA0 4.9740228 226 / 114 conP: 0.095 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG03200 cluster04 -> 1hryA0 7.2509063 73 / 114 conP: 0.341 CATH-ID: 1.10.30.10 Human sry. Chain: a. DNA. Chain: b. Engineered: yes --end-- VNG03211 one-of-top-five-correct: 0.352723206963207 CThresh: 3.023152 75 best_is: cluster13 VNG03211 cluster00 -> 1a1w00 7.2242911 83 / 69 conP: 0.383 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG03211 cluster01 -> 3ygsP0 7.1066059 97 / 69 conP: 0.342 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: c. Fragment: caspase re VNG03211 cluster02 -> 1cipA2 5.9550050 119 / 69 conP: 0.230 CATH-ID: 1.10.400.10 Guanine nucleotide-binding protein alpha-1 subunit. Chain: a. Synonym: VNG03211 cluster03 -> 1lmb30 6.5738063 87 / 69 conP: 0.331 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG03211 cluster04 -> 1b7yB4 6.3100448 74 / 69 conP: 0.343 CATH-ID: 3.30.56.20 Phenylalanyl-tRNA synthetase. Chain: a. Synonym: phers. Phenylalanyl-t VNG03211 cluster13 -> 1c9bA2 7.4358388 106 / 69 conP: 0.343 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te --end-- VNG0323h one-of-top-five-correct: 0.34814028571255 CThresh: 3.331777 75 best_is: cluster13 VNG0323h cluster00 -> 1jy8A 7.3458234 155 / 57 conP: 0.160 NO-CATH VNG0323h cluster01 -> 1fcfA 7.3458234 387 / 57 conP: 0.011 NO-CATH VNG0323h cluster02 -> 1jy8A 7.5698775 155 / 57 conP: 0.169 NO-CATH VNG0323h cluster03 -> 1yagA3 5.7774449 108 / 57 conP: 0.178 CATH-ID: 3.30.420.70 Actin. Chain: a. Gelsolin. Chain: g. Fragment: subdomain 1. Synonym: a VNG0323h cluster04 -> 1aoa01 5.7774449 118 / 57 conP: 0.161 CATH-ID: 1.10.418.10 T-fimbrin. Chain: null. Fragment: abd1 VNG0323h cluster13 -> 1cy5A0 7.7939316 92 / 57 conP: 0.320 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re --end-- VNG0331h one-of-top-five-correct: 0.459141317447824 CThresh: 8.390144 25 best_is: cluster11 VNG0331h cluster00 -> 1aj600 5.7624244 194 / 128 conP: 0.127 CATH-ID: 3.30.565.10 Gyrase. Chain: null. Fragment: n-terminal 24 kda. Engineered: yes. Mut VNG0331h cluster01 -> 1jkw01 6.9810603 176 / 128 conP: 0.186 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG0331h cluster02 -> 1qgxA1 6.0929673 219 / 128 conP: 0.122 CATH-ID: 3.30.540.10 3',5'-adenosine bisphosphatase. Chain: a. Synonym: pap phosphatase. En VNG0331h cluster03 -> 1toaA1 6.0593923 143 / 128 conP: 0.173 CATH-ID: 3.40.50.2010 Periplasmic binding protein troa. Chain: a, b. Fragment: soluble fract VNG0331h cluster04 -> 1bhmA0 6.6956881 198 / 128 conP: 0.157 CATH-ID: 3.40.91.20 Endonuclease bamhi. Chain: a, b. Synonym: r. Bamhi. Engineered: yes. D VNG0331h cluster11 -> 1ash00 9.7399070 147 / 128 conP: 0.372 CATH-ID: 1.10.490.10 Hemoglobin (domain one) --end-- VNG03372 one-of-top-five-correct: 0.477138980019428 CThresh: 2.225098 100 best_is: cluster04 VNG03372 cluster00 -> 1ash00 8.1711498 147 / 64 conP: 0.305 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG03372 cluster01 -> 1ihp02 6.5793224 137 / 64 conP: 0.236 CATH-ID: 1.10.910.10 Phytase. Chain: null. Synonym: myo-inositol-hexakisphosphate-3-phospho VNG03372 cluster02 -> 1dceA1 7.8777034 317 / 64 conP: 0.059 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG03372 cluster03 -> 1qqiA0 8.1711498 104 / 64 conP: 0.413 CATH-ID: 1.10.10.10 Phosphate regulon transcriptional regulatory protein phob. Chain: a. F VNG03372 cluster04 -> 1qqiA0 8.5992039 104 / 64 conP: 0.443 CATH-ID: 1.10.10.10 Phosphate regulon transcriptional regulatory protein phob. Chain: a. F --end-- VNG0343h one-of-top-five-correct: 0.262591298407972 CThresh: 6.863499 75 best_is: cluster04 VNG0343h cluster00 -> 1uroA0 5.0423650 357 / 93 conP: 0.025 CATH-ID: 3.20.20.210 Uroporphyrinogen decarboxylase. Chain: a. Synonym: uro-d, urod. Engine VNG0343h cluster01 -> 1dn1A3 6.3441181 120 / 93 conP: 0.183 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG0343h cluster02 -> 1ft1A0 6.2018678 315 / 93 conP: 0.047 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG0343h cluster03 -> 1ounA0 5.3996615 125 / 93 conP: 0.141 CATH-ID: 3.10.30.90 Nuclear transport factor 2. Chain: a, b. Synonym: pp15, b2. Engineered VNG0343h cluster04 -> 1k40A 7.4662826 126 / 93 conP: 0.228 NO-CATH --end-- VNG03451 one-of-top-five-correct: 0.288066412660368 CThresh: 5.615289 75 best_is: cluster16 VNG03451 cluster00 -> 1ew6A0 5.4307910 137 / 72 conP: 0.114 CATH-ID: 1.10.490.10 Dehaloperoxidase. Chain: a, b VNG03451 cluster01 -> 1mbe00 6.0173181 52 / 72 conP: 0.259 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG03451 cluster02 -> 1sfe02 5.4720526 84 / 72 conP: 0.179 CATH-ID: 1.10.10.10 Ada o6-methylguanine-DNA methyltransferase. Chain: null. Fragment: c-t VNG03451 cluster03 -> 1ho1C0 4.7152587 242 / 72 conP: 0.036 CATH-ID: 3.20.20.320 Pyridoxine 5'-phosphate synthase. Chain: a, b, c, d. Synonym: pyridoxa VNG03451 cluster04 -> 1a79A 7.3104139 171 / 72 conP: 0.137 NO-CATH VNG03451 cluster16 -> 1dn1A3 7.7281079 120 / 72 conP: 0.228 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. --end-- VNG03452 one-of-top-five-correct: 0.635255886538866 CThresh: 5.414268 75 best_is: cluster05 VNG03452 cluster00 -> 1gab00 7.3320112 53 / 146 conP: 0.532 CATH-ID: 1.10.8.40 Protein pab. Chain: null. Fragment: albumin-binding domain, residues 2 VNG03452 cluster01 -> 1idy00 6.1390610 54 / 146 conP: 0.445 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG03452 cluster02 -> 1gxpA 6.2122336 103 / 146 conP: 0.393 NO-CATH VNG03452 cluster03 -> 1bw6A0 6.0463047 56 / 146 conP: 0.436 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer VNG03452 cluster04 -> 1volA1 7.4698335 97 / 146 conP: 0.489 CATH-ID: 1.10.472.10 Transcription factor iib. Chain: a. Fragment: residues 113 - 316. Engi VNG03452 cluster05 -> 1jhgA0 9.9477480 101 / 146 conP: 0.657 CATH-ID: 1.10.1270.10 Trp operon repressor. Chain: a. Engineered: yes. Mutation: chain a, v5 --end-- VNG0346h one-of-top-five-correct: 0.263566475935494 CThresh: 3.078012 75 best_is: cluster16 VNG0346h cluster00 -> 1aisB2 4.3940020 94 / 52 conP: 0.137 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG0346h cluster01 -> 1bhdA0 5.0848658 108 / 52 conP: 0.138 CATH-ID: 1.10.418.10 Utrophin. Chain: a, b. Fragment: 2nd calponin homology domain from act VNG0346h cluster02 -> 1d2tA 5.5454416 222 / 52 conP: 0.038 NO-CATH VNG0346h cluster03 -> 3ygsP0 6.6968813 97 / 52 conP: 0.228 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: c. Fragment: caspase re VNG0346h cluster04 -> 1e5rA 5.3151537 260 / 52 conP: 0.022 NO-CATH VNG0346h cluster16 -> 1dgnA0 6.6968813 89 / 52 conP: 0.247 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin --end-- VNG03491 one-of-top-five-correct: 0.171298966823516 CThresh: 7.024285 25 best_is: cluster05 VNG03491 cluster00 -> 3bcl00 4.8711051 344 / 86 conP: 0.020 CATH-ID: 2.50.10.10 Bacteriochlorophyll-a protein VNG03491 cluster01 -> 1d2mA3 5.6159093 177 / 86 conP: 0.089 CATH-ID: 3.40.50.300 Excinuclease abc subunit b. Chain: a. Synonym: uvrb. Engineered: yes VNG03491 cluster02 -> 1eso00 4.0326853 140 / 86 conP: 0.077 CATH-ID: 2.60.40.200 Cu, zn superoxide dismutase. Chain: null. Synonym: sod. Engineered: ye VNG03491 cluster03 -> 1gof02 4.5542201 388 / 86 conP: 0.013 CATH-ID: 2.130.20.10 Galactose oxidase (ph 4.5) VNG03491 cluster04 -> 1chmA1 4.1616246 155 / 86 conP: 0.071 CATH-ID: 3.40.350.10 Creatine amidinohydrolase VNG03491 cluster05 -> 1kit03 6.2096183 187 / 86 conP: 0.096 CATH-ID: 2.60.120.200 Sialidase. Chain: null. Synonym: neuraminidase. Engineered: yes --end-- VNG03492 one-of-top-five-correct: 0.311406804363264 CThresh: 2.829952 100 best_is: cluster09 VNG03492 cluster00 -> 1sacA0 5.4064474 204 / 50 conP: 0.043 CATH-ID: 2.60.120.60 Serum amyloid p component (sap) VNG03492 cluster01 -> 1av401 5.6394429 87 / 50 conP: 0.199 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG03492 cluster02 -> 1ge8A0 5.6394429 238 / 50 conP: 0.029 CATH-ID: 3.70.10.10 Proliferation cell nuclear antigen. Chain: a. Engineered: yes. Mutatio VNG03492 cluster03 -> 1av401 5.8724385 87 / 50 conP: 0.209 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG03492 cluster04 -> 1htp00 5.8724385 131 / 50 conP: 0.125 CATH-ID: 2.40.50.100 H-protein complexed with lipoic acid charged in methylamine VNG03492 cluster09 -> 1dkxA1 7.2704119 135 / 50 conP: 0.168 CATH-ID: 2.60.34.10 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su --end-- VNG0352h one-of-top-five-correct: 0.496146651403203 CThresh: 4.148354 75 best_is: cluster03 VNG0352h cluster00 -> 1qnrA0 8.1479500 344 / 71 conP: 0.047 CATH-ID: 3.20.20.80 Endo-1,4-b-d-mannanase. Chain: a. Fragment: catalytic domain. Engineer VNG0352h cluster01 -> 1qnrA0 9.2390423 344 / 71 conP: 0.064 CATH-ID: 3.20.20.80 Endo-1,4-b-d-mannanase. Chain: a. Fragment: catalytic domain. Engineer VNG0352h cluster02 -> 1gkxA 7.7709245 308 / 71 conP: 0.060 NO-CATH VNG0352h cluster03 -> 1dar04 9.5203403 119 / 71 conP: 0.405 CATH-ID: 3.30.230.10 Elongation factor g. Chain: null. Synonym: ef-g VNG0352h cluster04 -> 1qd1B1 5.2541512 180 / 71 conP: 0.098 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot --end-- VNG03540 one-of-top-five-correct: 0.347350200593713 CThresh: 8.520777 25 best_is: cluster16 VNG03540 cluster00 -> 1qspA0 6.2546592 165 / 121 conP: 0.147 CATH-ID: 1.20.120.160 Ypd1. Chain: a, b. Engineered: yes. Biological_unit: monomer VNG03540 cluster01 -> 1zymA2 6.1393254 126 / 121 conP: 0.173 CATH-ID: 1.10.274.10 Enzyme i. Chain: a, b. Fragment: amino-terminal domain residues 1 - 25 VNG03540 cluster02 -> 1ktpA 6.4918898 162 / 121 conP: 0.158 NO-CATH VNG03540 cluster03 -> 1i1dA0 6.3609402 156 / 121 conP: 0.158 CATH-ID: 3.40.630.30 Glucosamine-phosphate n-acetyltransferase. Chain: a, b, c, d. Synonym: VNG03540 cluster04 -> 1ea1A0 6.0802907 447 / 121 conP: 0.031 CATH-ID: 1.10.630.10 Cytochrome p450 51-like rv0764c. Chain: a. Synonym: cyp51, 14alpha-ste VNG03540 cluster16 -> 1grj01 8.6803559 74 / 121 conP: 0.370 CATH-ID: 1.20.15.150 Grea transcript cleavage factor from escherichia coli --end-- VNG03541 one-of-top-five-correct: 0.727877788530159 CThresh: 3.974595 75 best_is: cluster04 VNG03541 cluster00 -> 1jgjA0 9.2643326 217 / 99 conP: 0.356 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG03541 cluster01 -> 1e7aA5 9.6353134 112 / 99 conP: 0.564 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG03541 cluster02 -> 1e7aA1 8.7971275 103 / 99 conP: 0.520 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG03541 cluster03 -> 1jgjA0 7.9370929 217 / 99 conP: 0.274 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG03541 cluster04 -> 1jgjA0 11.539601 217 / 99 conP: 0.516 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes --end-- VNG03610 one-of-top-five-correct: 0.193196292643004 CThresh: 3.000624 84 best_is: cluster04 VNG03610 cluster00 -> 1af800 3.3300449 86 / 43 conP: 0.089 CATH-ID: 1.10.1200.10 Actinorhodin polyketide synthase acyl carrier protein. Chain: null. Sy VNG03610 cluster01 -> 1fknA2 3.0863893 239 / 43 conP: 0.007 CATH-ID: 2.40.70.10 Memapsin 2. Chain: a, b. Fragment: protease domain. Synonym: beta-secr VNG03610 cluster02 -> 1akhB0 5.0356344 78 / 43 conP: 0.154 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG03610 cluster04 -> 1bor00 5.7666012 56 / 43 conP: 0.243 CATH-ID: 3.30.40.10 Transcription factor pml. Chain: null. Fragment: ring finger domain, r VNG03610 cluster05 -> 1lml02 3.5737006 124 / 43 conP: 0.053 CATH-ID: 3.90.132.10 Leishmanolysin. Chain: null. Synonym: gp63 protein, psp. Ec: 3.4.24.36 --end-- VNG03611 one-of-top-five-correct: 0.177357803800663 CThresh: 6.770172 75 best_is: cluster11 VNG03611 cluster00 -> 1prcC2 5.7320065 156 / 86 conP: 0.112 CATH-ID: 1.10.468.10 Photosynthetic reaction center VNG03611 cluster01 -> 1phb00 4.6263943 405 / 86 conP: 0.012 CATH-ID: 1.10.630.10 Cytochrome p450-cam (camphor 5-monoxygenase) complex with camphor (min VNG03611 cluster02 -> 1mml02 5.8138123 146 / 86 conP: 0.123 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes VNG03611 cluster03 -> 1bwzA2 5.0222003 137 / 86 conP: 0.108 CATH-ID: 3.10.310.10 Diaminopimelate epimerase. Chain: a. Synonym: dap epimerase. Engineere VNG03611 cluster04 -> 1e15A 5.2930204 496 / 86 conP: 0.007 NO-CATH VNG03611 cluster11 -> 1qd1B1 6.2096183 180 / 86 conP: 0.107 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot --end-- VNG0367h one-of-top-five-correct: 0.281497084201011 CThresh: 6.971778 26 best_is: cluster10 VNG0367h cluster00 -> 1dq3A3 5.5879949 87 / 113 conP: 0.225 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG0367h cluster01 -> 1vig00 5.8833445 71 / 113 conP: 0.259 CATH-ID: 3.30.70.210 Vigilin. Chain: null. Fragment: kh6, residues 432 to 501. Engineered: VNG0367h cluster02 -> 2tct01 5.5334654 65 / 113 conP: 0.246 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG0367h cluster03 -> 1pfkA2 6.3893146 126 / 113 conP: 0.223 CATH-ID: 3.40.50.460 Phosphofructokinase (r-state) complex with fructose-1,6-bisphosphate a VNG0367h cluster04 -> 1vig00 6.0930756 71 / 113 conP: 0.270 CATH-ID: 3.30.70.210 Vigilin. Chain: null. Fragment: kh6, residues 432 to 501. Engineered: VNG0367h cluster10 -> 1ospO2 7.3214059 76 / 113 conP: 0.338 CATH-ID: 2.20.50.10 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os --end-- VNG0370h one-of-top-five-correct: 0.669035991017769 CThresh: 6.919359 75 best_is: cluster11 VNG0370h cluster00 -> 1mba00 7.1786702 146 / 99 conP: 0.205 CATH-ID: 1.10.490.10 Myoglobin (met) ( p H 7.0) VNG0370h cluster01 -> 1zymA2 6.6098532 126 / 99 conP: 0.201 CATH-ID: 1.10.274.10 Enzyme i. Chain: a, b. Fragment: amino-terminal domain residues 1 - 25 VNG0370h cluster02 -> 1ljwA 4.9034022 141 / 99 conP: 0.122 NO-CATH VNG0370h cluster03 -> 1jud02 6.8456211 75 / 99 conP: 0.279 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG0370h cluster04 -> 1dciA2 5.7523041 63 / 99 conP: 0.235 CATH-ID: 1.10.12.10 Dienoyl-coa isomerase. Chain: a, b, c. Synonym: delta3,5,delta2,4-dien VNG0370h cluster11 -> 1mba00 12.108418 146 / 99 conP: 0.516 CATH-ID: 1.10.490.10 Myoglobin (met) ( p H 7.0) --end-- VNG03710 one-of-top-five-correct: 0.314249739859508 CThresh: 4.582833 75 best_is: cluster13 VNG03710 cluster00 -> 1p35A 5.1419246 299 / 68 conP: 0.025 NO-CATH VNG03710 cluster01 -> 1e96B0 5.7793682 185 / 68 conP: 0.090 CATH-ID: 1.25.40.10 Ras-related c3 botulinum toxin substrate 1. Chain: a. Synonym: rac1. E VNG03710 cluster02 -> 1g4wR0 5.7793682 341 / 68 conP: 0.019 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase sptp. Chain: r. Fragment: sptp residues 1 VNG03710 cluster03 -> 1hxiA0 6.2043306 108 / 68 conP: 0.198 CATH-ID: 1.25.40.10 Peroxisome targeting signal 1 receptor pex5. Chain: a. Fragment: first VNG03710 cluster04 -> 1fapB0 6.1937977 95 / 68 conP: 0.219 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG03710 cluster13 -> 1ahjB1 7.6916990 110 / 68 conP: 0.271 --end-- VNG0373h one-of-top-five-correct: 0.487720172981703 CThresh: 6.992503 42 best_is: cluster04 VNG0373h cluster00 -> 1qqtA3 5.4369021 138 / 121 conP: 0.184 CATH-ID: 1.10.730.10 Methionyl-tRNA synthetase. Chain: a. Fragment: truncated fragment, res VNG0373h cluster01 -> 1aj300 8.5445721 98 / 121 conP: 0.410 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: null. Fragment: 16th repeat, residues 1772 - 18 VNG0373h cluster02 -> 1fftC0 6.9556703 185 / 121 conP: 0.210 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG0373h cluster03 -> 2fha00 7.8319341 172 / 121 conP: 0.269 CATH-ID: 1.20.120.190 Ferritin. Chain: null. Engineered: yes. Mutation: k86q. Biological_uni VNG0373h cluster04 -> 1hx1B0 9.5793734 112 / 121 conP: 0.463 CATH-ID: 1.20.1040.80 Heat shock cognate 71 kda. Chain: a. Fragment: atpase domain. Synonym: --end-- VNG03740 one-of-top-five-correct: 0.530654912126161 CThresh: 3.394679 75 best_is: cluster04 VNG03740 cluster00 -> 1ap800 7.0682813 213 / 84 conP: 0.192 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes VNG03740 cluster01 -> 1ap800 6.0716718 213 / 84 conP: 0.151 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes VNG03740 cluster02 -> 1tdj03 6.9739864 161 / 84 conP: 0.263 CATH-ID: 3.40.1020.10 Biosynthetic threonine deaminase. Chain: null. Synonym: threonine dehy VNG03740 cluster03 -> 1a1601 7.7646507 172 / 84 conP: 0.290 CATH-ID: 3.40.350.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet VNG03740 cluster04 -> 1qm9A1 9.2608220 98 / 84 conP: 0.538 CATH-ID: 3.30.70.330 Polypyrimidine tract-binding protein. Chain: a. Fragment: RNA binding --end-- VNG03741 one-of-top-five-correct: 0.333233764956755 CThresh: 2.639410 100 best_is: cluster15 VNG03741 cluster00 -> 1qu6A2 5.3532424 76 / 59 conP: 0.258 CATH-ID: 3.30.160.20 Protein kinase pkr. Chain: a. Fragment: dsrna-binding n-terminal domai VNG03741 cluster01 -> 1qftA0 6.2296896 175 / 59 conP: 0.121 CATH-ID: 2.40.128.20 Female-specific histamine binding protein 2. Chain: a. Engineered: yes VNG03741 cluster02 -> 1aorA2 5.4713351 186 / 59 conP: 0.089 CATH-ID: 1.10.569.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri VNG03741 cluster03 -> 1asu00 5.6930852 162 / 59 conP: 0.121 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG03741 cluster04 -> 1bcpF0 5.9148353 98 / 59 conP: 0.239 CATH-ID: 2.40.50.110 Pertussis toxin. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Ec: 2.4.2. VNG03741 cluster15 -> 1ospO1 7.2526993 73 / 59 conP: 0.384 CATH-ID: 2.30.70.11 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os --end-- VNG03800 one-of-top-five-correct: 0.599014157949112 CThresh: 7.372280 25 best_is: cluster03 VNG03800 cluster00 -> 1gai00 7.6351241 472 / 138 conP: 0.081 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc VNG03800 cluster01 -> 2a3dA0 9.9738140 73 / 138 conP: 0.568 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG03800 cluster02 -> 1ec5A0 7.1534013 48 / 138 conP: 0.399 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG03800 cluster03 -> 2a3dA0 10.597749 73 / 138 conP: 0.612 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG03800 cluster04 -> 1dg3A1 9.1767509 300 / 138 conP: 0.249 CATH-ID: 1.20.1000.10 Interferon-induced guanylate-binding protein 1. Chain: a. Fragment: fu --end-- VNG03820 one-of-top-five-correct: 0.668993304151383 CThresh: 2.813879 100 best_is: cluster16 VNG03820 cluster00 -> 1e8cA 8.7214087 482 / 72 conP: 0.021 NO-CATH VNG03820 cluster01 -> 2dri01 8.5634959 125 / 72 conP: 0.402 CATH-ID: 3.40.50.2900 D-ribose-binding protein complexed with beta-d-ribose VNG03820 cluster02 -> 2scuB3 8.3546489 146 / 72 conP: 0.341 CATH-ID: 3.40.50.261 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG03820 cluster03 -> 1dbqA1 9.6077308 134 / 72 conP: 0.455 CATH-ID: 3.40.50.2200 Purine repressor. Chain: a, b. Fragment: corepressor-free corepressor- VNG03820 cluster04 -> 2scuB3 8.5634959 146 / 72 conP: 0.354 CATH-ID: 3.40.50.261 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG03820 cluster16 -> 1pea02 10.860813 176 / 72 conP: 0.443 CATH-ID: 3.40.50.3800 Amidase operon. Chain: null. Fragment: amide receptor/negative regulat --end-- VNG0383h one-of-top-five-correct: 0.287404141706775 CThresh: 8.470076 25 best_is: cluster16 VNG0383h cluster00 -> 1b4fA0 5.9961719 74 / 121 conP: 0.215 CATH-ID: 1.10.150.50 Ephb2. Chain: a, b, c, d, e, f, g, h. Fragment: sam domain. Engineered VNG0383h cluster01 -> 1b4fA0 5.0908901 74 / 121 conP: 0.174 CATH-ID: 1.10.150.50 Ephb2. Chain: a, b, c, d, e, f, g, h. Fragment: sam domain. Engineered VNG0383h cluster02 -> 1bpb01 6.0517180 58 / 121 conP: 0.234 CATH-ID: 1.10.150.20 DNA polymerase beta (beta polymerase) (apo, 31kd domain) VNG0383h cluster03 -> 1doqA0 6.7795450 69 / 121 conP: 0.261 CATH-ID: 1.10.359.10 RNA polymerase alpha subunit. Chain: a. Fragment: c-terminal domain. E VNG0383h cluster04 -> 1doqA0 6.7070805 69 / 121 conP: 0.257 CATH-ID: 1.10.359.10 RNA polymerase alpha subunit. Chain: a. Fragment: c-terminal domain. E VNG0383h cluster16 -> 1doqA0 7.8981877 69 / 121 conP: 0.328 CATH-ID: 1.10.359.10 RNA polymerase alpha subunit. Chain: a. Fragment: c-terminal domain. E --end-- VNG0389c one-of-top-five-correct: 0.334719009913114 CThresh: 5.355040 75 best_is: cluster04 VNG0389c cluster00 -> 1bia01 6.5494957 64 / 95 conP: 0.343 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0389c cluster01 -> 1e6uA1 5.3544371 220 / 95 conP: 0.105 CATH-ID: 3.40.50.720 Gdp-fucose synthetase. Chain: a. Synonym: gdp-4-keto 6-deoxy-mannose 3 VNG0389c cluster02 -> 1bia01 7.3960771 64 / 95 conP: 0.400 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0389c cluster03 -> 1bia01 6.7611410 64 / 95 conP: 0.357 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0389c cluster04 -> 1qqeA0 7.6828107 281 / 95 conP: 0.128 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation --end-- VNG0396c one-of-top-five-correct: 0.237927580916474 CThresh: 8.640760 25 best_is: cluster08 VNG0396c cluster00 -> 4jdwA0 6.1970753 360 / 136 conP: 0.069 CATH-ID: 3.75.10.10 L-arginine\:glycine amidinotransferase. Chain: a. Fragment: residues 6 VNG0396c cluster01 -> 2pgd01 5.2968002 180 / 136 conP: 0.127 CATH-ID: 3.40.50.720 6-phosphogluconate dehydrogenase (6-pgdh) VNG0396c cluster02 -> 1d5kA0 4.6794425 89 / 136 conP: 0.162 CATH-ID: 3.30.70.60 Translation elongation factor 1beta. Chain: a. Engineered: yes VNG0396c cluster03 -> 1reqB1 6.2047690 437 / 136 conP: 0.048 CATH-ID: 3.20.20.240 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de VNG0396c cluster04 -> 1ez0A2 5.4426978 185 / 136 conP: 0.129 CATH-ID: 3.40.309.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG0396c cluster08 -> 1kh0A 6.9330855 65 / 136 conP: 0.296 NO-CATH --end-- VNG04010 one-of-top-five-correct: 0.591325158791487 CThresh: 3.458529 75 best_is: cluster15 VNG04010 cluster00 -> 1fbnA0 8.5722719 225 / 100 conP: 0.330 CATH-ID: 3.40.50.150 Mj fibrillarin homologue. Chain: a. Engineered: yes VNG04010 cluster01 -> 1b5tA0 8.3292037 275 / 100 conP: 0.244 CATH-ID: 3.20.20.220 Methylenetetrahydrofolate reductase. Chain: a, b, c. Engineered: yes VNG04010 cluster02 -> 1fvqA0 7.0296720 72 / 100 conP: 0.480 CATH-ID: 3.30.70.100 Copper-transporting atpase. Chain: a. Fragment: ccc2a domain. Engineer VNG04010 cluster03 -> 1qd1B1 8.1968527 180 / 100 conP: 0.377 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG04010 cluster04 -> 1nal10 7.1164023 291 / 100 conP: 0.169 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 VNG04010 cluster15 -> 1f74A0 9.6007337 293 / 100 conP: 0.292 CATH-ID: 3.20.20.70 N-acetyl-neuraminate lyase. Chain: a, c. Synonym: nal. Engineered: yes --end-- VNG04011 one-of-top-five-correct: 0.306771625773258 CThresh: 3.023746 88 best_is: cluster17 VNG04011 cluster00 -> 2scuB2 5.9085977 84 / 71 conP: 0.304 CATH-ID: 2.30.35.30 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG04011 cluster01 -> 1d1dA2 6.5032412 80 / 71 conP: 0.350 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG04011 cluster02 -> 1c3jA2 5.1593851 166 / 71 conP: 0.135 CATH-ID: 3.40.50.110 Beta-glucosyltransferase. Chain: a. Engineered: yes VNG04011 cluster03 -> 1il600 5.8833445 166 / 71 conP: 0.162 CATH-ID: 1.20.120.200 Interleukin-6. Chain: null VNG04011 cluster04 -> 1dik05 5.5747142 89 / 71 conP: 0.274 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG04011 cluster17 -> 1pdo00 6.8207014 129 / 71 conP: 0.267 CATH-ID: 3.40.50.510 Mannose permease. Chain: null. Fragment: iia ==man== domain, residues --end-- VNG04013 one-of-top-five-correct: 0.585483870883316 CThresh: 2.871604 100 best_is: cluster19 VNG04013 cluster00 -> 1egzA0 9.1282202 291 / 69 conP: 0.119 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: VNG04013 cluster01 -> 1egzA0 7.6473864 291 / 69 conP: 0.081 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: VNG04013 cluster02 -> 1c4xA0 7.0127434 281 / 69 conP: 0.075 CATH-ID: 3.40.50.950 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Chain: a. Synonym VNG04013 cluster03 -> 1qhwA0 7.0127434 300 / 69 conP: 0.063 CATH-ID: 3.60.21.10 Purple acid phosphatase. Chain: a. Synonym: tartrate-resistant acid ph VNG04013 cluster04 -> 1aw500 8.9166725 321 / 69 conP: 0.086 CATH-ID: 3.20.20.230 5-aminolevulinate dehydratase. Chain: null. Synonym: porphobilinogen s VNG04013 cluster19 -> 1egzA0 9.9744109 291 / 69 conP: 0.147 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: --end-- VNG0402h one-of-top-five-correct: 0.215939489012287 CThresh: 3.997741 75 best_is: cluster14 VNG0402h cluster00 -> 1qc7A0 5.6882556 101 / 49 conP: 0.133 CATH-ID: 1.10.220.30 Flig. Chain: a, b. Fragment: flig-c. Engineered: yes VNG0402h cluster01 -> 1cjsA2 4.8479248 91 / 49 conP: 0.122 CATH-ID: 3.40.50.790 50s ribosomal protein l1p. Chain: a. Engineered: yes VNG0402h cluster02 -> 1bpoA2 5.2194542 155 / 49 conP: 0.058 CATH-ID: 1.25.40.30 Clathrin. Chain: a, b, c. Fragment: terminal domain and linker. Engine VNG0402h cluster03 -> 1dh0A1 4.0474508 270 / 49 conP: 0.008 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes VNG0402h cluster04 -> 1idy00 4.2818515 54 / 49 conP: 0.166 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG0402h cluster14 -> 1cjsA2 6.4651275 91 / 49 conP: 0.181 CATH-ID: 3.40.50.790 50s ribosomal protein l1p. Chain: a. Engineered: yes --end-- VNG04071 one-of-top-five-correct: 0.321378385792308 CThresh: 6.151548 75 best_is: cluster09 VNG04071 cluster00 -> 1mun02 6.4963391 112 / 96 conP: 0.234 CATH-ID: 1.10.340.10 Adenine glycosylase. Chain: null. Fragment: catalytic domain. Engineer VNG04071 cluster01 -> 1ezfA 5.1450293 323 / 96 conP: 0.043 NO-CATH VNG04071 cluster02 -> 1jncA 6.1580850 123 / 96 conP: 0.204 NO-CATH VNG04071 cluster03 -> 1bip00 7.7659888 122 / 96 conP: 0.291 CATH-ID: 1.10.120.10 Bifunctional trypsin/alpha-amylase inhibitor (rbi) (nmr, 20 structures VNG04071 cluster04 -> 1be3H0 6.1465287 64 / 96 conP: 0.282 CATH-ID: 1.10.287.20 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG04071 cluster09 -> 1bq7A0 7.8555702 186 / 96 conP: 0.209 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi --end-- VNG04080 one-of-top-five-correct: 0.41156131113596 CThresh: 5.966735 75 best_is: cluster03 VNG04080 cluster00 -> 1elwA0 8.0922094 117 / 104 conP: 0.355 CATH-ID: 1.25.40.10 Tpr1-domain of hop. Chain: a, b. Fragment: n-terminal domain. Engineer VNG04080 cluster01 -> 1qsaA2 6.9719998 70 / 104 conP: 0.353 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG04080 cluster02 -> 1a1700 7.5974454 159 / 104 conP: 0.264 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein VNG04080 cluster03 -> 1qsaA2 8.6570492 70 / 104 conP: 0.470 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG04080 cluster04 -> 1hxiA0 7.8080656 108 / 104 conP: 0.350 CATH-ID: 1.25.40.10 Peroxisome targeting signal 1 receptor pex5. Chain: a. Fragment: first --end-- VNG04101 one-of-top-five-correct: 0.61884189188591 CThresh: 2.891650 100 best_is: cluster11 VNG04101 cluster00 -> 1cei00 6.5507375 85 / 70 conP: 0.345 CATH-ID: 1.10.1200.20 Colicin e7 immunity protein. Chain: null. Synonym: imme7 VNG04101 cluster01 -> 1mmd06 5.2764638 66 / 70 conP: 0.306 CATH-ID: 3.30.70.320 Myosin. Chain: null. Fragment: motor domain. Engineered: yes. Mutation VNG04101 cluster02 -> 1i6kA 6.5507375 316 / 70 conP: 0.050 NO-CATH VNG04101 cluster03 -> 1pah00 6.5507375 308 / 70 conP: 0.054 CATH-ID: 1.10.800.10 Phenylalanine hydroxylase. Chain: null. Fragment: catalytic domain. En VNG04101 cluster04 -> 1a8vA1 6.1570570 49 / 70 conP: 0.402 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG04101 cluster11 -> 1cy5A0 10.342098 92 / 70 conP: 0.594 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re --end-- VNG04121 one-of-top-five-correct: 0.484258280240562 CThresh: 5.682806 75 best_is: cluster09 VNG04121 cluster00 -> 1adeA2 6.5091885 100 / 108 conP: 0.305 CATH-ID: 1.10.300.10 Adenylosuccinate synthetase. Chain: a, b. Domain: c-terminal. Ec: 6.3. VNG04121 cluster01 -> 1isfA 4.5998604 250 / 108 conP: 0.087 NO-CATH VNG04121 cluster02 -> 1pysB6 7.0410521 96 / 108 conP: 0.344 CATH-ID: 3.30.70.380 Phenylalanyl-tRNA synthetase. Chain: a, b. Biological_unit: tetramer o VNG04121 cluster03 -> 1adeA2 7.1294701 100 / 108 conP: 0.344 CATH-ID: 1.10.300.10 Adenylosuccinate synthetase. Chain: a, b. Domain: c-terminal. Ec: 6.3. VNG04121 cluster04 -> 1lxl00 5.8756572 221 / 108 conP: 0.143 CATH-ID: 1.10.437.10 Bcl-xl. Chain: null. Synonym: apoptosis regulator bcl-x. Engineered: y VNG04121 cluster09 -> 1babA0 9.2434888 142 / 108 conP: 0.424 CATH-ID: 1.10.490.10 Hemoglobin thionville alpha chain mutant with val 1 replaced by glu an --end-- VNG04140 one-of-top-five-correct: 0.228108971378141 CThresh: 6.386102 75 best_is: cluster20 VNG04140 cluster00 -> 1fjgT0 4.7812703 99 / 66 conP: 0.103 CATH-TRUNC VNG04140 cluster01 -> 1iizA 5.2153665 120 / 66 conP: 0.094 NO-CATH VNG04140 cluster02 -> 1a1700 5.2100733 159 / 66 conP: 0.064 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein VNG04140 cluster03 -> 1hbq00 7.2293493 176 / 66 conP: 0.093 CATH-ID: 2.40.128.20 Retinol binding protein (apo form) (apo brbp) VNG04140 cluster04 -> 1buoA0 4.7812703 121 / 66 conP: 0.083 CATH-ID: 3.30.710.10 Promyelocytic leukemia zinc finger protein plzf. Chain: a. Fragment: b VNG04140 cluster20 -> 1jlaA 7.3540880 546 / 66 conP: 0.002 NO-CATH --end-- VNG04142 one-of-top-five-correct: 0.437677266869378 CThresh: 3.787652 75 best_is: cluster11 VNG04142 cluster00 -> 1d2mA3 8.0324927 177 / 67 conP: 0.192 CATH-ID: 3.40.50.300 Excinuclease abc subunit b. Chain: a. Synonym: uvrb. Engineered: yes VNG04142 cluster01 -> 1bfd01 7.3988883 162 / 67 conP: 0.188 CATH-ID: 3.40.50.70 Benzoylformate decarboxylase. Chain: null. Engineered: yes. Biological VNG04142 cluster02 -> 1dioB0 6.5540825 179 / 67 conP: 0.132 CATH-ID: 3.40.990.10 Diol dehydratase. Chain: a, l. Engineered: yes. Diol dehydratase. Chai VNG04142 cluster03 -> 1fzrA 8.7363935 129 / 67 conP: 0.325 NO-CATH VNG04142 cluster04 -> 1d2mA3 7.1876869 177 / 67 conP: 0.157 CATH-ID: 3.40.50.300 Excinuclease abc subunit b. Chain: a. Synonym: uvrb. Engineered: yes VNG04142 cluster11 -> 1nsj00 8.8040188 205 / 67 conP: 0.181 CATH-ID: 3.20.20.90 Phosphoribosyl anthranilate isomerase. Chain: null. Synonym: prai. Eng --end-- VNG0420h one-of-top-five-correct: 0.379380523181536 CThresh: 4.489640 75 best_is: cluster07 VNG0420h cluster00 -> 1c3rA0 8.0272833 372 / 61 conP: 0.017 CATH-ID: 3.40.800.20 Hdlp (histone deacetylase-like protein). Chain: a, b. Engineered: yes. VNG0420h cluster01 -> 1qh5A0 7.5881983 260 / 61 conP: 0.052 CATH-ID: 3.60.15.10 Hydroxyacylglutathione hydrolase. Chain: a, b. Synonym: glyoxalase ii. VNG0420h cluster02 -> 1qhaA2 7.8077408 261 / 61 conP: 0.055 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG0420h cluster03 -> 1mup00 7.5881983 157 / 61 conP: 0.152 CATH-ID: 2.40.128.20 Major urinary protein complex with 2-(sec-butyl) thiazoline VNG0420h cluster04 -> 1bqcA0 7.9542094 302 / 61 conP: 0.036 CATH-ID: 3.20.20.80 Beta-mannanase. Chain: a. Ec: 3.2.1.78 VNG0420h cluster07 -> 1l1lA 8.5976482 717 / 61 conP: 0.000 NO-CATH --end-- VNG0424c one-of-top-five-correct: 0.16518958446772 CThresh: 8.527659 25 best_is: cluster13 VNG0424c cluster00 -> 1a5t02 5.6954638 40 / 129 conP: 0.245 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG0424c cluster01 -> 1a5t02 5.6954638 40 / 129 conP: 0.245 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG0424c cluster02 -> 1a5t02 5.6954638 40 / 129 conP: 0.245 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG0424c cluster03 -> 1a5t02 5.6954638 40 / 129 conP: 0.245 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG0424c cluster04 -> 1gtmA2 5.7018858 238 / 129 conP: 0.100 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a, b, c. Biological_unit: homohexamer VNG0424c cluster13 -> 1oacA1 5.7927602 80 / 129 conP: 0.211 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 --end-- VNG0433c one-of-top-five-correct: 0.30030301410552 CThresh: 8.937856 25 best_is: cluster10 VNG0433c cluster00 -> 1bqg02 6.7387599 260 / 110 conP: 0.077 CATH-ID: 3.20.20.120 D-glucarate dehydratase. Chain: null. Engineered: yes. Biological_unit VNG0433c cluster01 -> 1poxA3 5.5316404 190 / 110 conP: 0.084 CATH-ID: 3.40.50.970 Pyruvate oxidase mutant with pro 178 replaced by ser, ser 188 replaced VNG0433c cluster02 -> 1jpsH 5.4697880 213 / 110 conP: 0.072 NO-CATH VNG0433c cluster03 -> 1ijrA 6.0449989 104 / 110 conP: 0.155 NO-CATH VNG0433c cluster04 -> 1c3qA0 6.3082973 272 / 110 conP: 0.064 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG0433c cluster10 -> 1guyA 8.5309986 296 / 110 conP: 0.100 NO-CATH --end-- VNG0435h one-of-top-five-correct: 0.234574481337323 CThresh: 6.172090 75 best_is: cluster00 VNG0435h cluster00 -> 1eg9A1 6.8783939 318 / 87 conP: 0.053 CATH-ID: 3.90.380.10 Naphthalene 1,2-dioxygenase alpha subunit. Chain: a. Engineered: yes. VNG0435h cluster01 -> 1qasA2 6.1437864 291 / 87 conP: 0.053 CATH-ID: 3.20.20.190 PhospholipasE C delta-1. Chain: a, b. Synonym: plc-delta-1. Engineered VNG0435h cluster02 -> 1kit03 5.9824135 187 / 87 conP: 0.110 CATH-ID: 2.60.120.200 Sialidase. Chain: null. Synonym: neuraminidase. Engineered: yes VNG0435h cluster03 -> 1bovA0 6.8302173 69 / 87 conP: 0.291 CATH-ID: 2.40.50.70 Verotoxin-1 (b-oligomer, also called shiga-like toxin-1) VNG0435h cluster04 -> 1sacA0 5.3907857 204 / 87 conP: 0.084 CATH-ID: 2.60.120.60 Serum amyloid p component (sap) --end-- VNG04360 one-of-top-five-correct: 0.451418156500607 CThresh: 5.920652 75 best_is: cluster15 VNG04360 cluster00 -> 1pjr02 7.9369549 72 / 105 conP: 0.421 CATH-ID: 1.10.10.160 Pcra. Chain: null. Engineered: yes VNG04360 cluster01 -> 1jf7A 8.0767485 281 / 105 conP: 0.158 NO-CATH VNG04360 cluster02 -> 1h97A0 7.6181083 147 / 105 conP: 0.287 CATH-ID: 1.10.490.10 Globin-3. Chain: a, b. Engineered: yes. Synonym: myoglobin, hemoglobin VNG04360 cluster03 -> 1hx8A 6.4511627 270 / 105 conP: 0.112 NO-CATH VNG04360 cluster04 -> 1cii03 7.8607136 157 / 105 conP: 0.288 CATH-ID: 1.10.490.30 Colicin ia. Chain: null. Engineered: yes. Biological_unit: monomer VNG04360 cluster15 -> 1mroA3 9.0584315 227 / 105 conP: 0.263 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: --end-- VNG04391 one-of-top-five-correct: 0.557195696557531 CThresh: 4.992416 75 best_is: cluster02 VNG04391 cluster00 -> 1cpy02 7.5192609 72 / 98 conP: 0.423 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a VNG04391 cluster01 -> 1pbwA0 5.6865579 184 / 98 conP: 0.162 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG04391 cluster02 -> 1dowA 9.9595869 200 / 98 conP: 0.372 NO-CATH VNG04391 cluster03 -> 2bct00 5.6865579 502 / 98 conP: 0.020 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG04391 cluster04 -> 1flp00 5.6865579 142 / 98 conP: 0.208 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) --end-- VNG04510 one-of-top-five-correct: 0.794165884364241 CThresh: 1.781246 100 best_is: cluster17 VNG04510 cluster00 -> 1e2aA0 11.059085 102 / 90 conP: 0.751 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG04510 cluster01 -> 1e2aA0 11.428062 102 / 90 conP: 0.770 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG04510 cluster02 -> 1br0A0 10.386392 120 / 90 conP: 0.683 CATH-ID: 1.20.1040.20 Syntaxin 1-a. Chain: a. Fragment: n-terminal. Engineered: yes. Mutatio VNG04510 cluster03 -> 1e2aA0 10.690108 102 / 90 conP: 0.730 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG04510 cluster04 -> 1e2aA0 10.690108 102 / 90 conP: 0.730 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG04510 cluster17 -> 1br0A0 11.752706 120 / 90 conP: 0.762 CATH-ID: 1.20.1040.20 Syntaxin 1-a. Chain: a. Fragment: n-terminal. Engineered: yes. Mutatio --end-- VNG04511 one-of-top-five-correct: 0.889746066067625 CThresh: 3.594155 75 best_is: cluster02 VNG04511 cluster00 -> 2occC2 14.025743 191 / 115 conP: 0.794 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG04511 cluster01 -> 1brrA0 11.867854 230 / 115 conP: 0.620 CATH-ID: 1.20.85.10 Bacteriorhodopsin. Chain: a, b, c. Synonym: br. Other_details: schiff VNG04511 cluster02 -> 1fftC0 14.025743 185 / 115 conP: 0.800 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG04511 cluster03 -> 1ez3A0 12.424343 124 / 115 conP: 0.785 CATH-ID: 1.20.1040.20 Syntaxin-1a. Chain: a, b, c. Fragment: n-terminal domain. Synonym: syn VNG04511 cluster04 -> 1fftC0 11.792128 185 / 115 conP: 0.677 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch --end-- VNG04531 one-of-top-five-correct: 0.570321446102158 CThresh: 6.977629 59 best_is: cluster01 VNG04531 cluster00 -> 1bia02 7.2826050 181 / 110 conP: 0.200 CATH-ID: 3.30.930.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG04531 cluster01 -> 1fjgC1 10.732772 91 / 110 conP: 0.546 CATH-TRUNC VNG04531 cluster02 -> 1jvpP 5.5878412 281 / 110 conP: 0.075 NO-CATH VNG04531 cluster03 -> 1occH0 5.6535742 75 / 110 conP: 0.235 CATH-ID: 1.10.10.140 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG04531 cluster04 -> 1gm6A 7.0287534 158 / 110 conP: 0.212 NO-CATH --end-- VNG04532 one-of-top-five-correct: 0.342228290326507 CThresh: 3.100806 75 best_is: cluster10 VNG04532 cluster00 -> 1af701 5.7663582 80 / 74 conP: 0.311 CATH-ID: 1.10.155.10 Chemotaxis receptor methyltransferase cher. Chain: null. Engineered: y VNG04532 cluster01 -> 1bwoA0 6.8162340 90 / 74 conP: 0.357 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 VNG04532 cluster02 -> 1a81A2 6.1373296 45 / 74 conP: 0.412 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG04532 cluster03 -> 1ffvB3 5.5734860 166 / 74 conP: 0.159 CATH-ID: 3.30.176.10 Cuts, iron-sulfur protein of carbon monoxide dehydrogenase. Chain: a, VNG04532 cluster04 -> 1fadA0 5.0694599 95 / 74 conP: 0.243 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG04532 cluster10 -> 1bwoA0 7.2304833 90 / 74 conP: 0.385 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 --end-- VNG04551 one-of-top-five-correct: 0.467734421527929 CThresh: 3.762421 75 best_is: cluster01 VNG04551 cluster00 -> 1d8jA0 6.9571678 81 / 75 conP: 0.356 CATH-ID: 1.10.10.10 General transcription factor tfiie-beta. Chain: a. Fragment: central c VNG04551 cluster01 -> 1fafA0 8.9426223 79 / 75 conP: 0.499 CATH-ID: 1.20.15.80 Large t antigen. Chain: a. Fragment: n-terminal domain. Engineered: ye VNG04551 cluster02 -> 1gdj00 6.0623002 153 / 75 conP: 0.179 CATH-ID: 1.10.490.10 Leghemoglobin (deoxy) VNG04551 cluster03 -> 1e7aA4 7.2686445 86 / 75 conP: 0.366 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG04551 cluster04 -> 1uox00 5.9538435 295 / 75 conP: 0.053 CATH-ID: 3.10.270.10 Urate oxidase. Chain: null. Synonym: uricase. Biological_unit: tetrame --end-- VNG04581 one-of-top-five-correct: 0.893164611736854 CThresh: 2.694052 100 best_is: cluster12 VNG04581 cluster00 -> 1e2aA0 10.985862 102 / 117 conP: 0.776 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG04581 cluster01 -> 1e2aA0 13.105056 102 / 117 conP: 0.864 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG04581 cluster02 -> 2occC2 11.431046 191 / 117 conP: 0.698 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG04581 cluster03 -> 1e2aA0 12.353504 102 / 117 conP: 0.837 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG04581 cluster04 -> 2occC2 9.5296993 191 / 117 conP: 0.572 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG04581 cluster12 -> 1e2aA0 13.668719 102 / 117 conP: 0.882 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia --end-- VNG04582 one-of-top-five-correct: 0.815292515579991 CThresh: 4.754621 75 best_is: cluster02 VNG04582 cluster00 -> 1dnpA3 8.4401229 181 / 101 conP: 0.329 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG04582 cluster01 -> 1di1A0 10.786028 290 / 101 conP: 0.312 CATH-ID: 1.10.615.10 Aristolochene synthase. Chain: a, b. Synonym: sesquiterpene cyclase, a VNG04582 cluster02 -> 14psA0 13.219032 226 / 101 conP: 0.588 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG04582 cluster03 -> 1fftC0 6.3671384 185 / 101 conP: 0.208 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG04582 cluster04 -> 1e7aA5 8.7273321 112 / 101 conP: 0.462 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG0462c one-of-top-five-correct: 0.57056183057014 CThresh: 3.986036 75 best_is: cluster01 VNG0462c cluster00 -> 1bi2B1 8.4211293 73 / 93 conP: 0.527 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG0462c cluster01 -> 1bi2B1 9.7658357 73 / 93 conP: 0.621 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG0462c cluster02 -> 1qba03 8.1343726 484 / 93 conP: 0.044 CATH-ID: 3.20.20.80 Chitobiase. Chain: null. Synonym: beta-n-acetylhexosaminidase, n-acety VNG0462c cluster03 -> 1bia01 7.6613066 64 / 93 conP: 0.489 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0462c cluster04 -> 1bby00 8.5724182 69 / 93 conP: 0.545 CATH-ID: 1.10.10.10 Rap30. Chain: null. Fragment: DNA-binding domain. Synonym: transcripti --end-- VNG0471c one-of-top-five-correct: 0.614127645527971 CThresh: 1.495804 100 best_is: cluster00 VNG0471c cluster00 -> 1lmb30 9.7683340 87 / 65 conP: 0.618 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG0471c cluster01 -> 1r6900 7.4383519 63 / 65 conP: 0.517 CATH-ID: 1.10.260.10 434 repressor (amino-terminal domain) (r1-69) VNG0471c cluster02 -> 1b0nA0 9.3375551 103 / 65 conP: 0.546 CATH-ID: 1.10.260.10 Sinr protein. Chain: a. Engineered: yes. Sini protein. Chain: b. Engin VNG0471c cluster03 -> 1b0nA0 6.1067133 103 / 65 conP: 0.321 CATH-ID: 1.10.260.10 Sinr protein. Chain: a. Engineered: yes. Sini protein. Chain: b. Engin VNG0471c cluster04 -> 1b0nA0 7.1836606 103 / 65 conP: 0.392 CATH-ID: 1.10.260.10 Sinr protein. Chain: a. Engineered: yes. Sini protein. Chain: b. Engin --end-- VNG0472h one-of-top-five-correct: 0.556967443325415 CThresh: 8.920425 25 best_is: cluster03 VNG0472h cluster00 -> 1d5aA5 7.4133326 54 / 137 conP: 0.326 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG0472h cluster01 -> 1di1A0 7.5262113 290 / 137 conP: 0.130 CATH-ID: 1.10.615.10 Aristolochene synthase. Chain: a, b. Synonym: sesquiterpene cyclase, a VNG0472h cluster02 -> 1r2fA0 9.5456176 283 / 137 conP: 0.217 CATH-ID: 1.10.620.20 Ribonucleotide reductase r2. Chain: a, b. Engineered: yes VNG0472h cluster03 -> 1cunA1 10.850402 102 / 137 conP: 0.505 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: a, b, c. Fragment: repeats 16 and 17 (residues VNG0472h cluster04 -> 8abp02 7.3589058 167 / 137 conP: 0.211 CATH-ID: 3.40.50.2600 L- Arabinose-binding protein (mutant with met 108 replaced by leu) ( M --end-- VNG04730 one-of-top-five-correct: 0.29971716004495 CThresh: 4.271733 75 best_is: cluster19 VNG04730 cluster00 -> 1dluA1 5.8913239 203 / 65 conP: 0.075 CATH-ID: 3.40.47.10 Biosynthetic thiolase. Chain: a, b, c, d. Engineered: yes VNG04730 cluster01 -> 1uaaA4 5.4605450 162 / 65 conP: 0.100 CATH-ID: 1.10.486.10 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG04730 cluster02 -> 1jweA0 5.4605450 114 / 65 conP: 0.157 CATH-ID: 1.10.860.10 Dnab helicase. Chain: a. Fragment: n-terminal domain. Engineered: yes. VNG04730 cluster03 -> 1hndA 5.2451555 317 / 65 conP: 0.019 NO-CATH VNG04730 cluster04 -> 1e5dA1 5.9933863 143 / 65 conP: 0.137 CATH-ID: 3.40.50.360 Rubredoxin:oxygen oxidoreductase. Chain: a, b VNG04730 cluster19 -> 1tlfA1 7.4318940 131 / 65 conP: 0.215 CATH-ID: 3.40.50.2300 Tryptic core fragment of the lactose repressor of escherichia coli --end-- VNG04810 one-of-top-five-correct: 0.443770156609954 CThresh: 4.342186 75 best_is: cluster09 VNG04810 cluster00 -> 1h80A 6.0135677 433 / 80 conP: 0.018 NO-CATH VNG04810 cluster01 -> 9gafA2 7.0065206 143 / 80 conP: 0.237 CATH-ID: 3.50.11.10 Glycosylasparaginase. Chain: a, c. Synonym: glycoasparaginase,aspartyl VNG04810 cluster02 -> 9gafA2 8.6248678 143 / 80 conP: 0.331 CATH-ID: 3.50.11.10 Glycosylasparaginase. Chain: a, c. Synonym: glycoasparaginase,aspartyl VNG04810 cluster03 -> 1rypA0 6.8042272 243 / 80 conP: 0.109 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG04810 cluster04 -> 1dykA2 5.6160581 175 / 80 conP: 0.136 CATH-ID: 2.60.120.60 Laminin alpha 2 chain. Chain: a. Fragment: laminin g-like domain 4-5 p VNG04810 cluster09 -> 1qd9A0 8.8271612 124 / 80 conP: 0.382 CATH-ID: 3.30.70.130 Purine regulatory protein yabj. Chain: a, b, c. Engineered: yes --end-- VNG04820 one-of-top-five-correct: 0.379640828467527 CThresh: 4.234668 75 best_is: cluster12 VNG04820 cluster00 -> 1e7aA5 6.8748386 112 / 78 conP: 0.278 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG04820 cluster01 -> 1bvsA3 5.9527819 44 / 78 conP: 0.352 CATH-ID: 1.10.8.10 Ruva. Chain: a, b, c, d, e, f, g, h. Engineered: yes. Biological_unit: VNG04820 cluster02 -> 1qspA0 5.3604191 165 / 78 conP: 0.134 CATH-ID: 1.20.120.160 Ypd1. Chain: a, b. Engineered: yes. Biological_unit: monomer VNG04820 cluster03 -> 1qo0D2 5.8426196 46 / 78 conP: 0.341 CATH-ID: 1.10.15.10 Amic. Chain: a, b. Fragment: amide receptor. Engineered: yes. Other_de VNG04820 cluster04 -> 1bgf00 6.3705462 124 / 78 conP: 0.230 CATH-ID: 1.10.532.10 Stat-4. Chain: null. Fragment: n-terminal domain. Engineered: yes. Bio VNG04820 cluster12 -> 1qsmB0 8.0979451 149 / 78 conP: 0.282 CATH-ID: 3.40.630.30 Hpa2 histone acetyltransferase. Chain: a, b, c, d. Engineered: yes --end-- VNG04821 one-of-top-five-correct: 0.216026514722137 CThresh: 4.878860 75 best_is: cluster09 VNG04821 cluster00 -> 1pbwA0 6.4562639 184 / 67 conP: 0.099 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG04821 cluster01 -> 1bt4A1 4.9622380 242 / 67 conP: 0.037 CATH-ID: 3.40.640.10 Phosphoserine aminotransferase. Chain: a. Fragment: one complete subun VNG04821 cluster02 -> 1gweA 5.3891025 498 / 67 conP: 0.003 NO-CATH VNG04821 cluster03 -> 1qsaA2 4.6074290 70 / 67 conP: 0.175 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG04821 cluster04 -> 1e68A0 5.7663233 70 / 67 conP: 0.228 CATH-ID: 1.20.225.10 Bacteriocin as-48. Chain: a. Fragment: bacteriocin as-48 residue 36-10 VNG04821 cluster09 -> 1bdfA2 6.4562639 120 / 67 conP: 0.176 CATH-ID: 2.170.120.12 RNA polymerase alpha subunit. Chain: a, b, c, d. Fragment: n-terminal --end-- VNG04831 one-of-top-five-correct: 0.283938096633868 CThresh: 6.095769 75 best_is: cluster03 VNG04831 cluster00 -> 1jjuA 6.6655659 489 / 97 conP: 0.021 NO-CATH VNG04831 cluster01 -> 4monA 5.7107765 44 / 97 conP: 0.291 NO-CATH VNG04831 cluster02 -> 4monA 5.7107765 44 / 97 conP: 0.291 NO-CATH VNG04831 cluster03 -> 1ospO2 7.3214059 76 / 97 conP: 0.341 CATH-ID: 2.20.50.10 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG04831 cluster04 -> 4monA 5.7107765 44 / 97 conP: 0.291 NO-CATH --end-- VNG04840 one-of-top-five-correct: 0.269624032216516 CThresh: 6.998792 51 best_is: cluster15 VNG04840 cluster00 -> 1dj0A1 5.0878243 138 / 114 conP: 0.156 CATH-ID: 3.30.70.660 Pseudouridine synthase i. Chain: a, b. Engineered: yes VNG04840 cluster01 -> 1hndA 5.5088674 317 / 114 conP: 0.065 NO-CATH VNG04840 cluster02 -> 1d4tA0 4.4318696 104 / 114 conP: 0.158 CATH-ID: 3.30.505.10 T cell signal transduction molecule sap. Chain: a. Fragment: sh2 domai VNG04840 cluster03 -> 1hndA 4.5625130 317 / 114 conP: 0.050 NO-CATH VNG04840 cluster04 -> 2ilk01 4.7564856 106 / 114 conP: 0.170 CATH-ID: 1.20.120.200 Interleukin-10. Chain: null. Engineered: yes VNG04840 cluster15 -> 1broA0 7.1480476 277 / 114 conP: 0.125 CATH-ID: 3.40.50.950 Bromoperoxidase a2. Chain: a, b. Synonym: haloperoxidase a2, chloroper --end-- VNG0485h one-of-top-five-correct: 0.29106495688856 CThresh: 7.096756 25 best_is: cluster10 VNG0485h cluster00 -> 2gsaA1 5.1658968 178 / 128 conP: 0.152 CATH-ID: 3.30.70.160 Glutamate semialdehyde aminotransferase. Chain: a, b. Synonym: glutama VNG0485h cluster01 -> 1tml00 5.0843533 286 / 128 conP: 0.088 CATH-ID: 3.20.20.40 Endo-1,4-beta-d-glucanase VNG0485h cluster02 -> 1auk_ 5.3603067 480 / 128 conP: 0.035 NO-CATH VNG0485h cluster03 -> 1f3mA0 5.9990186 70 / 128 conP: 0.291 CATH-ID: 3.90.810.10 Serine/threonine-protein kinase pak-alpha. Chain: a, b. Fragment: pak1 VNG0485h cluster04 -> 1b3jA1 6.4063292 170 / 128 conP: 0.211 CATH-ID: 3.30.500.10 Mhc class i homolog mic-a. Chain: a. Fragment: extracellular domain, r VNG0485h cluster10 -> 1b3jA1 7.1647294 170 / 128 conP: 0.250 CATH-ID: 3.30.500.10 Mhc class i homolog mic-a. Chain: a. Fragment: extracellular domain, r --end-- VNG04870 one-of-top-five-correct: 0.221209418670352 CThresh: 5.636951 75 best_is: cluster07 VNG04870 cluster00 -> 1ipiA 6.8831284 114 / 67 conP: 0.178 NO-CATH VNG04870 cluster01 -> 1abmA0 6.4562639 198 / 67 conP: 0.074 CATH-ID: 3.90.149.10 Manganese superoxide dismutase VNG04870 cluster02 -> 1mnmA 4.7488057 85 / 67 conP: 0.137 NO-CATH VNG04870 cluster03 -> 2phy00 6.5276455 125 / 67 conP: 0.149 CATH-ID: 3.30.450.20 Photoactive yellow protein. Chain: null. Synonym: pyp VNG04870 cluster04 -> 1httA2 6.3428811 98 / 67 conP: 0.180 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Synonym: histidine-tRNA l VNG04870 cluster07 -> 9gafA2 6.8831284 143 / 67 conP: 0.138 CATH-ID: 3.50.11.10 Glycosylasparaginase. Chain: a, c. Synonym: glycoasparaginase,aspartyl --end-- VNG0496h one-of-top-five-correct: 0.149041949874546 CThresh: 10.000094 25 best_is: cluster02 VNG0496h cluster00 -> 1bgh00 5.6442498 85 / 126 conP: 0.148 CATH-ID: 2.40.50.10 Gene v protein (single-stranded DNA binding protein) VNG0496h cluster01 -> 1molA0 5.6769700 94 / 126 conP: 0.143 CATH-ID: 3.10.30.10 Monellin (single-chain, fused) VNG0496h cluster02 -> 4monA 6.1947873 44 / 126 conP: 0.204 NO-CATH VNG0496h cluster03 -> 1kffA 5.2304354 120 / 126 conP: 0.113 NO-CATH VNG0496h cluster04 -> 1bgh00 4.6512143 85 / 126 conP: 0.115 CATH-ID: 2.40.50.10 Gene v protein (single-stranded DNA binding protein) --end-- VNG04990 one-of-top-five-correct: 0.442687653226523 CThresh: 3.726897 75 best_is: cluster07 VNG04990 cluster00 -> 1bqv00 6.7108836 110 / 66 conP: 0.244 CATH-ID: 1.20.800.10 Ets-1. Chain: null. Fragment: pointed domain and map kinase phosphoryl VNG04990 cluster01 -> 1amx00 4.9956718 150 / 66 conP: 0.114 CATH-ID: 2.60.40.740 Collagen adhesin. Chain: null. Fragment: cbd (151 - 318). Synonym: cbd VNG04990 cluster02 -> 1d7uA1 5.2100733 141 / 66 conP: 0.131 CATH-ID: 3.30.70.160 2,2-dialkylglycine decarboxylase (pyruvate). Chain: a. Synonym: dgd. E VNG04990 cluster03 -> 1dusA0 8.2116939 192 / 66 conP: 0.173 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG04990 cluster04 -> 1ako00 7.9972924 268 / 66 conP: 0.081 CATH-ID: 3.60.10.10 Exonuclease iii. Chain: null. Engineered: yes. Biological_unit: monome VNG04990 cluster07 -> 1glaG2 8.8548983 254 / 66 conP: 0.115 CATH-ID: 3.40.367.10 Glycerol kinase complex with glycerol and the (escherichia coli) gluco --end-- VNG04992 one-of-top-five-correct: 0.282828698927499 CThresh: 6.179591 75 best_is: cluster16 VNG04992 cluster00 -> 1eu8A1 7.0160320 190 / 86 conP: 0.137 CATH-ID: 3.40.190.10 Trehalose/maltose binding protein. Chain: a. Engineered: yes VNG04992 cluster01 -> 1hyhA1 6.4285971 141 / 86 conP: 0.167 CATH-ID: 3.40.50.720 L-2-hydroxyisocaproate dehydrogenase. Chain: a, b, c, d. Synonym: l-hi VNG04992 cluster02 -> 2hgsA4 7.0012303 122 / 86 conP: 0.216 CATH-ID: 3.40.50.1760 Glutathione synthetase. Chain: a. Engineered: yes. Biological_unit: ho VNG04992 cluster03 -> 1moq02 7.4986861 148 / 86 conP: 0.205 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG04992 cluster04 -> 1httA1 6.8033273 267 / 86 conP: 0.074 CATH-ID: 3.40.690.10 Histidyl-tRNA synthetase. Chain: a, b, c, d. Synonym: histidine-tRNA l VNG04992 cluster16 -> 2lbp02 7.5949393 145 / 86 conP: 0.213 CATH-ID: 3.40.50.3600 Leucine-binding protein ( LBP ) --end-- VNG05041 one-of-top-five-correct: 0.313115503209723 CThresh: 5.356267 75 best_is: cluster09 VNG05041 cluster00 -> 1ayj00 5.8724385 50 / 72 conP: 0.266 CATH-ID: 3.30.30.10 Antifungal protein 1. Chain: null. Synonym: rs-afp1 VNG05041 cluster01 -> 1vdeA2 6.2661790 94 / 72 conP: 0.209 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes VNG05041 cluster02 -> 1jwbB 6.0573320 240 / 72 conP: 0.057 NO-CATH VNG05041 cluster03 -> 2yhx_ 4.8042500 457 / 72 conP: 0.005 NO-CATH VNG05041 cluster04 -> 1apyA0 5.7493496 161 / 72 conP: 0.106 CATH-ID: 3.30.426.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG05041 cluster09 -> 1cbf02 7.9369549 121 / 72 conP: 0.247 CATH-ID: 3.30.950.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m --end-- VNG0506h one-of-top-five-correct: 0.218256379023883 CThresh: 2.691485 100 best_is: cluster11 VNG0506h cluster00 -> 1soxB1 5.3333745 84 / 42 conP: 0.156 CATH-ID: 3.10.120.10 Sulfite oxidase. Chain: a, b. Biological_unit: dimer VNG0506h cluster01 -> 1a1700 5.0880204 159 / 42 conP: 0.047 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein VNG0506h cluster02 -> 1g4aA0 4.3519581 173 / 42 conP: 0.031 CATH-ID: 3.60.20.10 Atp-dependent hsl protease atp-binding subunit hslu. Chain: e, f. Syno VNG0506h cluster03 -> 1qckA0 5.3333745 89 / 42 conP: 0.145 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG0506h cluster04 -> 2kinB 3.8612499 100 / 42 conP: 0.085 NO-CATH VNG0506h cluster11 -> 1bq7A0 6.0694368 186 / 42 conP: 0.040 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi --end-- VNG0508h one-of-top-five-correct: 0.211987290615378 CThresh: 4.667376 75 best_is: cluster12 VNG0508h cluster00 -> 1bu2A1 4.8481476 112 / 64 conP: 0.125 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0508h cluster01 -> 3ecaA2 5.2809413 114 / 64 conP: 0.136 CATH-ID: 3.40.50.40 Asparaginase type ii (eca) VNG0508h cluster02 -> 1eh6A1 4.6446874 71 / 64 conP: 0.174 CATH-ID: 2.30.37.60 O6-alkylguanine-DNA alkyltransferase. Chain: a. Synonym: agt, o6-methy VNG0508h cluster03 -> 1befA2 5.2809413 85 / 64 conP: 0.178 CATH-ID: 2.40.10.10 Dengue virus ns3 serine protease. Chain: a. Fragment: protease domain, VNG0508h cluster04 -> 3ecaA2 5.2809413 114 / 64 conP: 0.136 CATH-ID: 3.40.50.40 Asparaginase type ii (eca) VNG0508h cluster12 -> 1b37A2 6.3629255 218 / 64 conP: 0.065 CATH-ID: 3.90.660.10 Polyamine oxidase. Chain: a, b, c. Fragment: fad-binding domain. Ec: 1 --end-- VNG0509h one-of-top-five-correct: 0.281644535856976 CThresh: 1.552352 100 best_is: cluster11 VNG0509h cluster00 -> 1lla01 5.9527819 357 / 44 conP: 0.004 CATH-ID: 1.10.639.10 Hemocyanin (subunit type ii) VNG0509h cluster01 -> 1ap700 5.9527819 168 / 44 conP: 0.075 CATH-ID: 1.25.40.20 P19-ink4d. Chain: null. Synonym: cyclin dependent kinase 4 inhibitor d VNG0509h cluster02 -> 1i9tA0 4.2587442 189 / 44 conP: 0.034 CATH-ID: 3.90.190.10 mRNA capping enzyme. Chain: a. Fragment: tpase domain (residues 1-210) VNG0509h cluster03 -> 1mdl02 5.4687711 230 / 44 conP: 0.026 CATH-ID: 3.20.20.120 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r VNG0509h cluster04 -> 1aisB1 5.4687711 99 / 44 conP: 0.175 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG0509h cluster11 -> 1a1700 6.4367926 159 / 44 conP: 0.097 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein --end-- VNG05100 one-of-top-five-correct: 0.356215915383497 CThresh: 3.413457 75 best_is: cluster00 VNG05100 cluster00 -> 1dceA1 8.0189588 317 / 53 conP: 0.022 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG05100 cluster01 -> 1hyp00 7.3320112 75 / 53 conP: 0.312 CATH-ID: 1.10.110.10 Hydrophobic protein from soybean VNG05100 cluster02 -> 1dceA1 6.1870985 317 / 53 conP: 0.013 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG05100 cluster03 -> 1aua02 6.4160811 83 / 53 conP: 0.238 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG05100 cluster04 -> 1fz1F2 6.4160811 73 / 53 conP: 0.263 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: --end-- VNG0511h one-of-top-five-correct: 0.535348115328704 CThresh: 2.814845 100 best_is: cluster07 VNG0511h cluster00 -> 1bjaA0 7.3978421 95 / 75 conP: 0.405 CATH-ID: 1.10.10.10 Transcription regulatory protein mota. Chain: a, b. Fragment: n-termin VNG0511h cluster01 -> 1bjaA0 6.5712883 95 / 75 conP: 0.349 CATH-ID: 1.10.10.10 Transcription regulatory protein mota. Chain: a, b. Fragment: n-termin VNG0511h cluster02 -> 1gln05 7.6972042 98 / 75 conP: 0.419 CATH-ID: 1.10.10.350 Glutamyl-tRNA synthetase. Chain: null VNG0511h cluster03 -> 1bgxT6 7.1785851 144 / 75 conP: 0.288 CATH-ID: 1.10.473.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG0511h cluster04 -> 1gln05 7.3978421 98 / 75 conP: 0.399 CATH-ID: 1.10.10.350 Glutamyl-tRNA synthetase. Chain: null VNG0511h cluster07 -> 1c9bA2 9.2544118 106 / 75 conP: 0.512 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te --end-- VNG05121 one-of-top-five-correct: 0.298972843387475 CThresh: 5.100916 75 best_is: cluster05 VNG05121 cluster00 -> 1j51A 7.3203282 405 / 77 conP: 0.024 NO-CATH VNG05121 cluster01 -> 1bf5A3 6.2010838 121 / 77 conP: 0.191 CATH-ID: 1.10.238.10 Stat-1. Chain: a. Engineered: yes. Biological_unit: dimer. DNA. Chain: VNG05121 cluster02 -> 1qazA0 7.3203282 351 / 77 conP: 0.039 CATH-ID: 1.50.40.20 Alginate lyase a1-iii. Chain: a. Engineered: yes. Biological_unit: mon VNG05121 cluster03 -> 1cpt00 6.9110299 412 / 77 conP: 0.020 CATH-ID: 1.10.630.10 Cytochrome p450-terp VNG05121 cluster04 -> 1aipC3 6.6450636 53 / 77 conP: 0.332 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG05121 cluster05 -> 1cpt00 7.5249773 412 / 77 conP: 0.024 CATH-ID: 1.10.630.10 Cytochrome p450-terp --end-- VNG0516h one-of-top-five-correct: 0.249591233403198 CThresh: 6.809231 75 best_is: cluster17 VNG0516h cluster00 -> 1broA0 4.9288066 277 / 82 conP: 0.031 CATH-ID: 3.40.50.950 Bromoperoxidase a2. Chain: a, b. Synonym: haloperoxidase a2, chloroper VNG0516h cluster01 -> 1qrjB1 5.4747389 114 / 82 conP: 0.132 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG0516h cluster02 -> 1a8vA1 5.1649976 49 / 82 conP: 0.196 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG0516h cluster03 -> 1ehyA0 5.1295911 282 / 82 conP: 0.032 CATH-ID: 3.40.50.950 Soluble epoxide hydrolase. Chain: a, b, c, d. Engineered: yes. Biologi VNG0516h cluster04 -> 1ie8A0 4.3767064 250 / 82 conP: 0.034 CATH-ID: 1.10.565.10 Vitamin d3 receptor. Chain: a. Synonym: 1,25-dihydroxyvitamin d3 recep VNG0516h cluster17 -> 1bob03 7.5053070 54 / 82 conP: 0.314 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes --end-- VNG0518h one-of-top-five-correct: 0.192227502635843 CThresh: 0.832254 100 best_is: cluster03 VNG0518h cluster00 -> 1a3c00 4.9255682 166 / 36 conP: 0.037 CATH-ID: 3.40.50.90 Pyrimidine operon regulatory protein pyrr. Chain: null. Synonym: pyrr. VNG0518h cluster01 -> 1a4iA2 4.9255682 89 / 36 conP: 0.147 CATH-ID: 3.40.50.2050 Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyc VNG0518h cluster02 -> 1a3c00 4.9255682 166 / 36 conP: 0.037 CATH-ID: 3.40.50.90 Pyrimidine operon regulatory protein pyrr. Chain: null. Synonym: pyrr. VNG0518h cluster03 -> 1a1s02 4.9255682 160 / 36 conP: 0.042 CATH-ID: 3.40.50.1370 Ornithine carbamoyltransferase. Chain: null. Synonym: ornithine transc VNG0518h cluster04 -> 1a3c00 4.9255682 166 / 36 conP: 0.037 CATH-ID: 3.40.50.90 Pyrimidine operon regulatory protein pyrr. Chain: null. Synonym: pyrr. --end-- VNG0520h one-of-top-five-correct: 0.266283937015658 CThresh: 4.497588 75 best_is: cluster18 VNG0520h cluster00 -> 1dm0A 4.3284604 264 / 60 conP: 0.019 NO-CATH VNG0520h cluster01 -> 1bi103 4.8800014 74 / 60 conP: 0.172 CATH-ID: 2.30.30.120 Diphtheria toxin repressor. Chain: null. Synonym: dtxr. Engineered: ye VNG0520h cluster02 -> 1jxpA1 4.3284604 88 / 60 conP: 0.131 CATH-ID: 2.40.10.120 Ns3 serine protease. Chain: a, b. Synonym: hydrolase. Engineered: yes. VNG0520h cluster03 -> 1ospO1 5.2109993 73 / 60 conP: 0.188 CATH-ID: 2.30.70.11 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG0520h cluster04 -> 1quqB0 4.3284604 114 / 60 conP: 0.100 CATH-ID: 2.40.50.10 Replication protein a 32 kd subunit. Chain: a, c. Fragment: central do VNG0520h cluster18 -> 1bpoA1 7.1967117 332 / 60 conP: 0.020 CATH-ID: 2.130.30.10 Clathrin. Chain: a, b, c. Fragment: terminal domain and linker. Engine --end-- VNG05270 one-of-top-five-correct: 0.294401700872515 CThresh: 6.967478 50 best_is: cluster11 VNG05270 cluster00 -> 1qsaA1 5.5878412 363 / 110 conP: 0.046 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG05270 cluster01 -> 1qgkA 5.8323514 876 / 110 conP: 0.002 NO-CATH VNG05270 cluster02 -> 1fcdC2 5.0437711 96 / 110 conP: 0.184 CATH-ID: 1.10.1250.10 FlavocytochromE C sulfide dehydrogenase (fcsd) VNG05270 cluster03 -> 1qsaA2 5.1904112 70 / 110 conP: 0.218 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG05270 cluster04 -> 1bg602 4.9875701 146 / 110 conP: 0.139 CATH-ID: 1.10.1040.10 N-(1-d-carboxylethyl)-l-norvaline dehydrogenase. Chain: null. Engineer VNG05270 cluster11 -> 1a6s00 7.5600876 87 / 110 conP: 0.331 CATH-ID: 1.10.150.90 Gag polyprotein. Chain: null. Fragment: m-domain. Engineered: yes. Mut --end-- VNG0532h one-of-top-five-correct: 0.236615703859849 CThresh: 8.554848 25 best_is: cluster12 VNG0532h cluster00 -> 1f3cA0 5.0350392 89 / 124 conP: 0.162 CATH-ID: 3.30.740.10 Dynein. Chain: a, b. Fragment: 8kda light chain. Synonym: protein inhi VNG0532h cluster01 -> 1mdc00 5.2215840 131 / 124 conP: 0.139 CATH-ID: 2.40.128.20 Fatty acid binding protein (manduca sexta) (mfb2) VNG0532h cluster02 -> 1ew4A0 7.0941953 106 / 124 conP: 0.241 CATH-ID: 3.30.920.10 Cyay protein. Chain: a. Engineered: yes VNG0532h cluster03 -> 1ebmA1 5.3597038 89 / 124 conP: 0.175 CATH-ID: 3.30.310.40 8-oxoguanine DNA glycosylase. Chain: a. Fragment: core fragment (resid VNG0532h cluster04 -> 1dpuA0 6.5738063 69 / 124 conP: 0.252 CATH-ID: 1.10.10.10 Replication protein a (rpa32) c-terminal domain. Chain: a. Fragment: c VNG0532h cluster12 -> 1shcA0 7.1475237 195 / 124 conP: 0.163 CATH-ID: 2.30.29.30 Shc. Chain: a. Fragment: ptb domain. Engineered: yes. Trka receptor ph --end-- VNG05340 one-of-top-five-correct: 0.607297073546751 CThresh: 4.599920 75 best_is: cluster05 VNG05340 cluster00 -> 1a6q02 6.5896480 69 / 102 conP: 0.396 CATH-ID: 1.10.920.10 Phosphatase 2c. Chain: null. Engineered: yes VNG05340 cluster01 -> 1flp00 7.0926468 142 / 102 conP: 0.315 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG05340 cluster02 -> 1a6q02 6.8972041 69 / 102 conP: 0.417 CATH-ID: 1.10.920.10 Phosphatase 2c. Chain: null. Engineered: yes VNG05340 cluster03 -> 1elkA0 8.3218778 153 / 102 conP: 0.378 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG05340 cluster04 -> 1jp6A 7.8441978 152 / 102 conP: 0.347 NO-CATH VNG05340 cluster05 -> 1cpcA0 10.254924 162 / 102 conP: 0.499 CATH-ID: 1.10.490.20 C-phycocyanin --end-- VNG05341 one-of-top-five-correct: 0.480623666554861 CThresh: 3.557503 75 best_is: cluster07 VNG05341 cluster00 -> 1cy5A0 5.5731961 92 / 62 conP: 0.211 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re VNG05341 cluster01 -> 1bgvA3 7.3209771 76 / 62 conP: 0.347 CATH-ID: 1.10.285.10 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer VNG05341 cluster02 -> 1qm9A2 4.9177782 89 / 62 conP: 0.187 CATH-ID: 3.30.70.330 Polypyrimidine tract-binding protein. Chain: a. Fragment: RNA binding VNG05341 cluster03 -> 1a1w00 6.6655592 83 / 62 conP: 0.289 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG05341 cluster04 -> 1dgnA0 8.1948677 89 / 62 conP: 0.371 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG05341 cluster07 -> 1lddA 9.2872308 74 / 62 conP: 0.489 NO-CATH --end-- VNG0535c one-of-top-five-correct: 0.447838706345096 CThresh: 5.436194 75 best_is: cluster17 VNG0535c cluster00 -> 1k8tA 7.1068021 498 / 95 conP: 0.024 NO-CATH VNG0535c cluster01 -> 1bu2A1 7.4277577 112 / 95 conP: 0.317 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0535c cluster02 -> 1az902 7.8748136 266 / 95 conP: 0.145 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet VNG0535c cluster03 -> 1blwC0 7.6828107 137 / 95 conP: 0.293 CATH-ID: 1.20.120.200 Erythropoietin receptor. Chain: a, b. Fragment: extracellular domains. VNG0535c cluster04 -> 1lre00 7.2674407 81 / 95 conP: 0.357 CATH-ID: 1.20.81.10 Receptor-associated protein. Chain: null. Fragment: n-terminal domain, VNG0535c cluster17 -> 1bgf00 9.0268308 124 / 95 conP: 0.402 CATH-ID: 1.10.532.10 Stat-4. Chain: null. Fragment: n-terminal domain. Engineered: yes. Bio --end-- VNG05401 one-of-top-five-correct: 0.39633618241264 CThresh: 3.579278 75 best_is: cluster09 VNG05401 cluster00 -> 1e5rA 5.6025348 260 / 67 conP: 0.049 NO-CATH VNG05401 cluster01 -> 1mroB2 5.8159671 295 / 67 conP: 0.037 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG05401 cluster02 -> 1ceo00 6.4562639 332 / 67 conP: 0.030 CATH-ID: 3.20.20.80 Cellulase celc. Chain: null. Synonym: 1,4-beta-d-glucan-glucanohydrola VNG05401 cluster03 -> 1rdr02 6.1142307 94 / 67 conP: 0.254 CATH-ID: 3.30.70.620 Poliovirus 3d polymerase. Chain: null. Engineered: yes VNG05401 cluster04 -> 1fj7A0 5.6025348 101 / 67 conP: 0.215 CATH-ID: 3.30.70.330 Nucleolin rbd1. Chain: a. Synonym: protein c23. Engineered: yes VNG05401 cluster09 -> 1hy1A3 8.2436941 72 / 67 conP: 0.442 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a --end-- VNG05420 one-of-top-five-correct: 0.430222993477017 CThresh: 3.510239 75 best_is: cluster14 VNG05420 cluster00 -> 1fsz01 6.1294751 212 / 70 conP: 0.102 CATH-ID: 3.40.50.1440 Ftsz. Chain: null. Synonym: sulb. Engineered: yes VNG05420 cluster01 -> 1qorA2 6.1294751 146 / 70 conP: 0.180 CATH-ID: 3.40.50.720 Quinone oxidoreductase complexed with NADPH VNG05420 cluster02 -> 1qf6A5 6.4415647 102 / 70 conP: 0.272 CATH-ID: 3.40.50.800 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG05420 cluster03 -> 1dl5A 7.3932622 317 / 70 conP: 0.054 NO-CATH VNG05420 cluster04 -> 1fl2A2 5.5061781 94 / 70 conP: 0.236 CATH-ID: 3.40.50.2070 Alkyl hydroperoxide reductase subunit f. Chain: a. Fragment: c-termina VNG05420 cluster14 -> 1qf6A5 8.5268204 102 / 70 conP: 0.406 CATH-ID: 3.40.50.800 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch --end-- VNG0543h one-of-top-five-correct: 0.132883318700286 CThresh: 9.978867 25 best_is: cluster09 VNG0543h cluster00 -> 1hcz02 4.3625845 59 / 131 conP: 0.127 CATH-ID: 2.40.50.100 Cytochrome f. Chain: null VNG0543h cluster01 -> 1ei5A3 5.5227944 102 / 131 conP: 0.139 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG0543h cluster02 -> 1gcyA2 4.9200819 56 / 131 conP: 0.148 CATH-ID: 2.60.40.1180 Glucan 1,4-alpha-maltotetrahydrolase. Chain: a. Engineered: yes VNG0543h cluster03 -> 1dlxA0 4.7638914 120 / 131 conP: 0.106 CATH-ID: 3.30.920.10 Frataxin. Chain: a. Fragment: c-terminal domain (91-130). Engineered: VNG0543h cluster04 -> 1qqnA3 4.4851250 89 / 131 conP: 0.114 CATH-ID: 3.30.420.50 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG0543h cluster09 -> 1rypD0 5.7056605 241 / 131 conP: 0.075 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, --end-- VNG0544h one-of-top-five-correct: 0.24317640911594 CThresh: 9.707276 25 best_is: cluster00 VNG0544h cluster00 -> 1jkw01 7.5409586 176 / 134 conP: 0.178 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG0544h cluster01 -> 1fjhA0 5.7208100 236 / 134 conP: 0.086 CATH-ID: 3.40.50.720 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase. Chain: a, b. S VNG0544h cluster02 -> 1bucA3 5.8934040 141 / 134 conP: 0.139 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG0544h cluster03 -> 1ytfD1 5.9581160 53 / 134 conP: 0.207 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG0544h cluster04 -> 1evyA 5.4617865 346 / 134 conP: 0.047 NO-CATH --end-- VNG0548c one-of-top-five-correct: 0.352784691710279 CThresh: 4.544190 75 best_is: cluster14 VNG0548c cluster00 -> 1chkA1 6.5800857 143 / 59 conP: 0.127 CATH-ID: 1.20.141.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG0548c cluster01 -> 1e7aA1 4.3625845 103 / 59 conP: 0.110 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG0548c cluster02 -> 1b3uA0 5.2495850 588 / 59 conP: 0.001 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG0548c cluster03 -> 1d2nA2 5.4713351 67 / 59 conP: 0.206 CATH-ID: 1.10.8.60 N-ethylmaleimide-sensitive fusion protein. Chain: a. Fragment: d2. Eng VNG0548c cluster04 -> 1azsC2 6.0105778 115 / 59 conP: 0.147 CATH-ID: 1.10.400.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG0548c cluster14 -> 1in4A 8.3540866 298 / 59 conP: 0.037 NO-CATH --end-- VNG05491 one-of-top-five-correct: 0.48011067507966 CThresh: 4.197572 75 best_is: cluster04 VNG05491 cluster00 -> 1ybvA0 6.8400102 270 / 119 conP: 0.221 CATH-ID: 3.40.50.720 Trihydroxynaphthalene reductase. Chain: a, b. Synonym: naphthol reduct VNG05491 cluster01 -> 1ab8A0 6.7951248 177 / 119 conP: 0.326 CATH-ID: 3.50.6.10 Adenylyl cyclase. Chain: a, b. Fragment: c2 domain. Engineered: yes. B VNG05491 cluster02 -> 1yrgA0 7.5278763 343 / 119 conP: 0.184 CATH-ID: 3.80.10.10 Gtpase-activating protein rna1_schpo. Chain: a, b. Synonym: rna1p. Ran VNG05491 cluster03 -> 1b4uB0 7.1985002 298 / 119 conP: 0.211 CATH-ID: 3.40.830.10 Protocatechuate 4,5-dioxygenase. Chain: a, b, c, d. Fragment: chain a, VNG05491 cluster04 -> 1i40A 8.2739700 175 / 119 conP: 0.429 NO-CATH --end-- VNG05622 one-of-top-five-correct: 0.367274827705112 CThresh: 6.759148 75 best_is: cluster11 VNG05622 cluster00 -> 1gai00 6.2874507 472 / 90 conP: 0.014 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc VNG05622 cluster01 -> 1ec5A0 5.9741910 48 / 90 conP: 0.255 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG05622 cluster02 -> 1kpsB 6.8730138 156 / 90 conP: 0.161 NO-CATH VNG05622 cluster03 -> 1jflA 5.5066999 228 / 90 conP: 0.069 NO-CATH VNG05622 cluster04 -> 1kpsB 7.0682014 156 / 90 conP: 0.169 NO-CATH VNG05622 cluster11 -> 1f9gA 8.8248907 721 / 90 conP: 0.004 NO-CATH --end-- VNG05631 one-of-top-five-correct: 0.260303807940774 CThresh: 3.556600 75 best_is: cluster01 VNG05631 cluster00 -> 1prcC2 6.5944764 156 / 54 conP: 0.113 CATH-ID: 1.10.468.10 Photosynthetic reaction center VNG05631 cluster01 -> 1eswA0 6.8221840 500 / 54 conP: 0.002 CATH-ID: 3.20.20.80 Amylomaltase. Chain: a. Engineered: yes VNG05631 cluster02 -> 1dn1A2 5.0005227 107 / 54 conP: 0.132 CATH-ID: 3.90.830.10 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG05631 cluster03 -> 1chkA2 5.2282304 95 / 54 conP: 0.159 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG05631 cluster04 -> 1dxxA1 5.9113534 113 / 54 conP: 0.154 CATH-ID: 1.10.418.10 Dystrophin. Chain: a, b, c, d. Fragment: actin-binding. Engineered: ye --end-- VNG0565c one-of-top-five-correct: 0.389684162965149 CThresh: 8.591056 25 best_is: cluster12 VNG0565c cluster00 -> 1vcbB0 5.1941520 88 / 117 conP: 0.157 CATH-ID: 3.30.710.10 Elongin b. Chain: a, d, g, j. Fragment: residues 1-120. Engineered: ye VNG0565c cluster01 -> 1mla02 6.8391218 232 / 117 conP: 0.113 CATH-ID: 3.40.366.10 Malonyl-coenzyme a acyl carrier protein transacylase. Chain: null. Syn VNG0565c cluster02 -> 1ns1A0 6.8541389 73 / 117 conP: 0.248 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re VNG0565c cluster03 -> 1aca00 6.6283210 86 / 117 conP: 0.222 CATH-ID: 1.20.80.10 Acyl-coenzyme a binding protein (acbp) complex with palmitoyl-coenzyme VNG0565c cluster04 -> 1uaaA2 7.4376079 74 / 117 conP: 0.279 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG0565c cluster12 -> 1uaaA2 9.3017299 74 / 117 conP: 0.399 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- --end-- VNG0568c one-of-top-five-correct: 0.347872141147301 CThresh: 4.185519 75 best_is: cluster01 VNG0568c cluster00 -> 1tplA2 5.2495850 244 / 59 conP: 0.031 CATH-ID: 3.40.640.10 Tyrosine phenol-lyase VNG0568c cluster01 -> 1fchA0 8.1323365 302 / 59 conP: 0.036 CATH-ID: 1.25.40.140 Peroxisomal targeting signal 1 receptor. Chain: a, b. Fragment: c-term VNG0568c cluster02 -> 1bg602 7.2453360 146 / 59 conP: 0.156 CATH-ID: 1.10.1040.10 N-(1-d-carboxylethyl)-l-norvaline dehydrogenase. Chain: null. Engineer VNG0568c cluster03 -> 1rnl02 6.5800857 76 / 59 conP: 0.259 CATH-ID: 1.10.10.60 Nitrate/nitrite response regulator protein narl. Chain: null. Fragment VNG0568c cluster04 -> 1fjgT0 7.9825841 99 / 59 conP: 0.285 CATH-TRUNC --end-- VNG0570h one-of-top-five-correct: 0.135120261489858 CThresh: 2.396329 100 best_is: cluster00 VNG0570h cluster00 -> 1ad3A2 4.5284006 195 / 34 conP: 0.011 CATH-ID: 3.40.309.10 Aldehyde dehydrogenase (class 3). Chain: a, b. Synonym: aldh. Engineer VNG0570h cluster01 -> 1dcqA0 4.2673726 276 / 34 conP: 0.002 CATH-ID: 1.25.40.50 Pyk2-associated protein beta. Chain: a. Fragment: arf-gap domain. Engi VNG0570h cluster02 -> 1bi2B1 3.5675125 73 / 34 conP: 0.092 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG0570h cluster03 -> 1k8tA 4.5284006 498 / 34 conP: 0.000 NO-CATH VNG0570h cluster04 -> 1b37A1 4.5284006 239 / 34 conP: 0.004 CATH-ID: 3.50.50.60 Polyamine oxidase. Chain: a, b, c. Fragment: fad-binding domain. Ec: 1 --end-- VNG05710 one-of-top-five-correct: 0.364594773479494 CThresh: 6.765574 75 best_is: cluster03 VNG05710 cluster00 -> 1k3fA 6.4203465 253 / 111 conP: 0.117 NO-CATH VNG05710 cluster01 -> 2trcP1 6.2951335 131 / 111 conP: 0.216 CATH-ID: 3.40.30.10 Transducin. Chain: b, g. Fragment: lys-c resistant fragment, the gamma VNG05710 cluster02 -> 1ez3A0 6.5760343 124 / 111 conP: 0.238 CATH-ID: 1.20.1040.20 Syntaxin-1a. Chain: a, b, c. Fragment: n-terminal domain. Synonym: syn VNG05710 cluster03 -> 1es8A0 8.3180059 192 / 111 conP: 0.252 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes VNG05710 cluster04 -> 1mnmA 5.6763668 85 / 111 conP: 0.236 NO-CATH --end-- VNG05711 one-of-top-five-correct: 0.469550285149627 CThresh: 4.510721 75 best_is: cluster02 VNG05711 cluster00 -> 1dq3A3 7.3700772 87 / 105 conP: 0.434 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG05711 cluster01 -> 1reqB1 5.8924623 437 / 105 conP: 0.046 CATH-ID: 3.20.20.240 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de VNG05711 cluster02 -> 1qupA1 8.6188349 68 / 105 conP: 0.556 CATH-ID: 3.30.70.100 Superoxide dismutase 1 copper chaperone. Chain: a, b. Engineered: yes VNG05711 cluster03 -> 1b4bA0 6.8207014 71 / 105 conP: 0.422 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c. Fragment: oligomerization domain, VNG05711 cluster04 -> 1dorA1 6.9691776 267 / 105 conP: 0.171 CATH-ID: 3.20.20.90 Dihydroorotate dehydrogenase a. Chain: a, b. Biological_unit: homodime --end-- VNG05730 one-of-top-five-correct: 0.241341237798595 CThresh: 6.997266 65 best_is: cluster15 VNG05730 cluster00 -> 1mrp01 4.9014269 156 / 88 conP: 0.090 CATH-ID: 3.40.190.10 Ferric iron binding protein. Chain: null. Synonym: fbp, hita, hfbp, ma VNG05730 cluster01 -> 1ecl02 5.7570212 166 / 88 conP: 0.105 CATH-ID: 1.10.460.10 Escherichia coli topoisomerase i. Domain: amino-terminal 67kda. Synony VNG05730 cluster02 -> 1jilA 5.0301100 323 / 88 conP: 0.026 NO-CATH VNG05730 cluster03 -> 1ffyA3 5.1674443 254 / 88 conP: 0.047 CATH-ID: 1.10.730.10 Isoleucyl-tRNA synthetase. Chain: a. Synonym: isoleucine--tRNA ligase, VNG05730 cluster04 -> 1ef4A0 4.3772538 55 / 88 conP: 0.160 CATH-ID: 1.10.10.60 DNA-directed RNA polymerase. Chain: a. Fragment: subunit rpb10. Synony VNG05730 cluster15 -> 1ytfD1 7.3320112 53 / 88 conP: 0.311 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami --end-- VNG0574c one-of-top-five-correct: 0.386252209967736 CThresh: 6.001786 75 best_is: cluster01 VNG0574c cluster00 -> 2cyp01 8.0648907 170 / 84 conP: 0.201 CATH-ID: 1.10.520.10 Cytochrome c peroxidase (ferrocytochrome c (colon) h2 O2 reductase) VNG0574c cluster01 -> 1flp00 8.8393247 142 / 84 conP: 0.284 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG0574c cluster02 -> 1ezfA 7.1716524 323 / 84 conP: 0.052 NO-CATH VNG0574c cluster03 -> 1guxB0 8.0648907 141 / 84 conP: 0.243 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG0574c cluster04 -> 2yhx_ 6.9739864 457 / 84 conP: 0.017 NO-CATH --end-- VNG05750 one-of-top-five-correct: 0.398250807189681 CThresh: 4.593096 75 best_is: cluster14 VNG05750 cluster00 -> 1h6pA 6.3401063 188 / 70 conP: 0.107 NO-CATH VNG05750 cluster01 -> 1tfe01 6.9719998 97 / 70 conP: 0.264 CATH-ID: 3.30.479.20 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG05750 cluster02 -> 2tpt01 7.2756669 107 / 70 conP: 0.262 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG05750 cluster03 -> 2tpt01 6.9510503 107 / 70 conP: 0.244 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG05750 cluster04 -> 1ec5A0 6.9175592 48 / 70 conP: 0.366 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG05750 cluster14 -> 1e7aA3 8.6570492 92 / 70 conP: 0.380 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG05751 one-of-top-five-correct: 0.308058767618997 CThresh: 7.852848 25 best_is: cluster00 VNG05751 cluster00 -> 1moq01 8.2303354 218 / 106 conP: 0.165 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG05751 cluster01 -> 1hf2A 5.4024586 196 / 106 conP: 0.092 NO-CATH VNG05751 cluster02 -> 1dtwA0 5.2421294 382 / 106 conP: 0.027 CATH-ID: 3.40.50.970 Branched-chain alpha-keto acid dehydrogenase alpha subunit. Chain: a. VNG05751 cluster03 -> 1k3fA 6.5407656 253 / 106 conP: 0.088 NO-CATH VNG05751 cluster04 -> 1ccwB1 5.3116931 417 / 106 conP: 0.022 CATH-ID: 3.20.20.290 Glutamate mutase. Chain: a, c. Fragment: b12-binding subunit. Synonym: --end-- VNG0576c one-of-top-five-correct: 0.181599572374071 CThresh: 8.864663 25 best_is: cluster03 VNG0576c cluster00 -> 1erjA0 4.5850020 350 / 125 conP: 0.036 CATH-ID: 2.130.10.20 Transcriptional repressor tup1. Chain: a, b, c. Fragment: c-terminal w VNG0576c cluster01 -> 1fi2A0 4.9381344 201 / 125 conP: 0.086 CATH-ID: 2.60.120.10 Oxalate oxidase. Chain: a. Synonym: germin. Ec: 1.2.3.4 VNG0576c cluster02 -> 1jacA0 4.4883501 133 / 125 conP: 0.108 CATH-ID: 2.100.10.30 Jacalin. Chain: a, b, c, d, e, f, g, h. Synonym: jackfruit agglutinin. VNG0576c cluster03 -> 1ei5A2 6.3503005 82 / 125 conP: 0.217 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG0576c cluster04 -> 1dm0A 4.7580695 264 / 125 conP: 0.059 NO-CATH --end-- VNG0579h one-of-top-five-correct: 0.225382048721105 CThresh: 6.292433 75 best_is: cluster01 VNG0579h cluster00 -> 1poc00 5.8428570 134 / 85 conP: 0.146 CATH-ID: 1.20.90.10 Phospholipase a2 complex with the transition-state analogue VNG0579h cluster01 -> 1bjaA0 6.8363931 95 / 85 conP: 0.239 CATH-ID: 1.10.10.10 Transcription regulatory protein mota. Chain: a, b. Fragment: n-termin VNG0579h cluster02 -> 1qjtA0 6.2766107 99 / 85 conP: 0.205 CATH-ID: 1.10.238.10 Epidermal growth factor receptor substrate substrate 15, eps15. Chain: VNG0579h cluster03 -> 1dofA 6.4686599 385 / 85 conP: 0.025 NO-CATH VNG0579h cluster04 -> 1cpt00 6.6372854 412 / 85 conP: 0.021 CATH-ID: 1.10.630.10 Cytochrome p450-terp --end-- VNG0581h one-of-top-five-correct: 0.32322325867307 CThresh: 6.862871 75 best_is: cluster18 VNG0581h cluster00 -> 1jkw02 5.6000737 101 / 94 conP: 0.175 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG0581h cluster01 -> 1a0b00 6.4794084 117 / 94 conP: 0.195 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG0581h cluster02 -> 1evyA 6.9446266 346 / 94 conP: 0.048 NO-CATH VNG0581h cluster03 -> 1a36A5 6.0573320 72 / 94 conP: 0.231 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG0581h cluster04 -> 1mhdA0 5.9709422 123 / 94 conP: 0.167 CATH-ID: 3.90.520.10 Smad3. Chain: a, b. Fragment: mh1 domain, residues 1 - 144. Synonym: s VNG0581h cluster18 -> 1rpo00 8.2468258 61 / 94 conP: 0.380 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid --end-- VNG0585h one-of-top-five-correct: 0.595013312575488 CThresh: 7.704043 25 best_is: cluster04 VNG0585h cluster00 -> 1grj01 8.4732312 74 / 127 conP: 0.415 CATH-ID: 1.20.15.150 Grea transcript cleavage factor from escherichia coli VNG0585h cluster01 -> 1f02T0 7.7828909 66 / 127 conP: 0.378 CATH-ID: 4.10.820.10 Intimin. Chain: i. Fragment: c-terminal domain (282 residues). Enginee VNG0585h cluster02 -> 1ytfD1 7.1030287 53 / 127 conP: 0.349 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG0585h cluster03 -> 2lisA0 5.8064981 131 / 127 conP: 0.193 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG0585h cluster04 -> 1ez3A0 10.953157 124 / 127 conP: 0.524 CATH-ID: 1.20.1040.20 Syntaxin-1a. Chain: a, b, c. Fragment: n-terminal domain. Synonym: syn --end-- VNG05860 one-of-top-five-correct: 0.268370772417479 CThresh: 3.507079 75 best_is: cluster02 VNG05860 cluster00 -> 1asu00 6.7499816 162 / 51 conP: 0.097 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG05860 cluster01 -> 1d0nA3 6.3658409 121 / 51 conP: 0.145 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG05860 cluster02 -> 1asu00 6.9816067 162 / 51 conP: 0.103 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG05860 cluster03 -> 1asu00 6.5183565 162 / 51 conP: 0.092 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG05860 cluster04 -> 1alo05 6.5183565 93 / 51 conP: 0.206 CATH-ID: 3.30.176.10 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur --end-- VNG05911 one-of-top-five-correct: 0.501889530978895 CThresh: 2.970218 100 best_is: cluster07 VNG05911 cluster00 -> 4crxA2 6.2840991 111 / 63 conP: 0.237 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG05911 cluster01 -> 1abv00 7.9265474 105 / 63 conP: 0.348 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi VNG05911 cluster02 -> 1ezfA 7.2742744 323 / 63 conP: 0.038 NO-CATH VNG05911 cluster03 -> 1aw500 6.8394257 321 / 63 conP: 0.034 CATH-ID: 3.20.20.230 5-aminolevulinate dehydratase. Chain: null. Synonym: porphobilinogen s VNG05911 cluster04 -> 2dpmA1 6.6220014 155 / 63 conP: 0.174 CATH-ID: 3.40.50.150 Adenine-specific methyltransferase dpnii 1. Chain: a. Synonym: m.Dpnii VNG05911 cluster07 -> 1chuA3 9.2310934 102 / 63 conP: 0.446 CATH-ID: 1.20.1040.60 L-aspartate oxidase. Chain: a. Engineered: yes. Biological_unit: homod --end-- VNG0594h one-of-top-five-correct: 0.493860207778469 CThresh: 6.890139 41 best_is: cluster11 VNG0594h cluster00 -> 1qu6A1 5.4456427 85 / 107 conP: 0.211 CATH-ID: 3.30.160.20 Protein kinase pkr. Chain: a. Fragment: dsrna-binding n-terminal domai VNG0594h cluster01 -> 1qstA0 7.0723493 160 / 107 conP: 0.207 CATH-ID: 3.40.630.30 Tgcn5 histone acetyl transferase. Chain: a. Engineered: yes. Biologica VNG0594h cluster02 -> 2pgd01 7.0679906 180 / 107 conP: 0.187 CATH-ID: 3.40.50.720 6-phosphogluconate dehydrogenase (6-pgdh) VNG0594h cluster03 -> 1gca01 6.7000706 148 / 107 conP: 0.203 CATH-ID: 3.40.50.3300 Glucose/galactose-binding protein complex with galactose VNG0594h cluster04 -> 1f89A 5.2862845 271 / 107 conP: 0.070 NO-CATH VNG0594h cluster11 -> 1i72A 9.9189944 251 / 107 conP: 0.247 NO-CATH --end-- VNG0596h one-of-top-five-correct: 0.232164247068454 CThresh: 3.205039 75 best_is: cluster17 VNG0596h cluster00 -> 1dv8A0 4.4744651 128 / 50 conP: 0.084 CATH-ID: 3.10.100.10 Asialoglycoprotein receptor 1. Chain: a. Fragment: carbohydrate recogn VNG0596h cluster01 -> 2vik00 4.4744651 126 / 50 conP: 0.086 CATH-ID: 3.40.20.10 Villin 14t. Chain: null. Fragment: residues 1 - 126. Synonym: villin d VNG0596h cluster02 -> 1dv8A0 4.0084740 128 / 50 conP: 0.074 CATH-ID: 3.10.100.10 Asialoglycoprotein receptor 1. Chain: a. Fragment: carbohydrate recogn VNG0596h cluster03 -> 1hw5A2 3.5403010 68 / 50 conP: 0.140 CATH-ID: 1.10.10.10 Catabolite gene activator. Chain: a, b. Synonym: camp receptor protein VNG0596h cluster04 -> 1mwpA0 5.7184226 96 / 50 conP: 0.170 CATH-ID: 3.90.570.10 Amyloid a4 protein. Chain: a. Fragment: heparin binding domain. Engine VNG0596h cluster17 -> 1et0A1 6.3384296 108 / 50 conP: 0.172 CATH-ID: 3.30.470.10 4-amino-4-deoxychorismate lyase. Chain: a. Synonym: adc lyase. Enginee --end-- VNG0597h one-of-top-five-correct: 0.270896392795279 CThresh: 8.341102 25 best_is: cluster00 VNG0597h cluster00 -> 5eat02 7.3645934 371 / 132 conP: 0.088 CATH-ID: 1.10.615.10 5-epi-aristolochene synthase. Chain: null. Synonym: 5-epi-aristolochen VNG0597h cluster01 -> 1qqcA4 6.2586237 138 / 132 conP: 0.195 CATH-ID: 3.90.710.10 DNA polymerase ii. Chain: a. Engineered: yes. Biological_unit: monomer VNG0597h cluster02 -> 1ec5A0 5.0308228 48 / 132 conP: 0.215 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG0597h cluster03 -> 1r2fA0 4.4716182 283 / 132 conP: 0.063 CATH-ID: 1.10.620.20 Ribonucleotide reductase r2. Chain: a, b. Engineered: yes VNG0597h cluster04 -> 1qmgA2 5.8607610 293 / 132 conP: 0.087 CATH-ID: 1.10.572.10 Acetohydroxy-acid isomeroreductase. Chain: a, b, c, d. Synonym: keto-a --end-- VNG05980 one-of-top-five-correct: 0.542968534365084 CThresh: 4.279553 75 best_is: cluster16 VNG05980 cluster00 -> 1eno00 9.1377617 297 / 87 conP: 0.163 CATH-ID: 3.40.50.720 Enoyl acyl carrier protein reductase. Chain: null. Engineered: yes. Mu VNG05980 cluster01 -> 1cbzA1 5.7046244 315 / 87 conP: 0.059 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG05980 cluster02 -> 1dfmA0 7.3700772 218 / 87 conP: 0.181 CATH-ID: 3.40.91.20 Endonuclease bglii. Chain: a, b. Fragment: bglii. Engineered: yes. Mut VNG05980 cluster03 -> 1fiy02 9.5321802 374 / 87 conP: 0.105 CATH-ID: 3.20.20.60 Phosphoenolpyruvate carboxylase. Chain: null. Synonym: pepc. Engineere VNG05980 cluster04 -> 1seiA1 6.3869696 72 / 87 conP: 0.351 CATH-ID: 3.30.70.350 Ribosomal protein s8. Chain: a, b. Engineered: yes VNG05980 cluster16 -> 1eg7A 9.7293895 549 / 87 conP: 0.030 NO-CATH --end-- VNG0599c one-of-top-five-correct: 0.51106774095336 CThresh: 3.144965 75 best_is: cluster02 VNG0599c cluster00 -> 1ash00 6.5761849 147 / 92 conP: 0.308 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG0599c cluster01 -> 1ihgA 7.9749759 364 / 92 conP: 0.113 NO-CATH VNG0599c cluster02 -> 1ihgA 8.7505248 364 / 92 conP: 0.138 NO-CATH VNG0599c cluster03 -> 1jmsA 7.3933143 360 / 92 conP: 0.100 NO-CATH VNG0599c cluster04 -> 1mroA3 7.0055398 227 / 92 conP: 0.215 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: --end-- VNG06001 one-of-top-five-correct: 0.497013949233272 CThresh: 3.094857 75 best_is: cluster07 VNG06001 cluster00 -> 2bce00 5.7343046 532 / 79 conP: 0.009 CATH-ID: 3.40.50.950 Cholesterol esterase. Chain: null. Synonym: bile salt activated lipase VNG06001 cluster01 -> 1chkA1 7.8545729 143 / 79 conP: 0.339 CATH-ID: 1.20.141.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG06001 cluster02 -> 1k5hA 7.0423091 398 / 79 conP: 0.041 NO-CATH VNG06001 cluster03 -> 1fz1F2 7.2509063 73 / 79 conP: 0.445 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: VNG06001 cluster04 -> 1bu2A1 7.5457409 112 / 79 conP: 0.382 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG06001 cluster07 -> 1lxl00 8.8699028 221 / 79 conP: 0.256 CATH-ID: 1.10.437.10 Bcl-xl. Chain: null. Synonym: apoptosis regulator bcl-x. Engineered: y --end-- VNG0601h one-of-top-five-correct: 0.637707144401208 CThresh: 4.087274 75 best_is: cluster08 VNG0601h cluster00 -> 1e7aA4 5.2670955 86 / 79 conP: 0.244 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG0601h cluster01 -> 1dioA 9.0729687 551 / 79 conP: 0.015 NO-CATH VNG0601h cluster02 -> 1ede00 9.4791006 310 / 79 conP: 0.130 CATH-ID: 3.40.50.950 Haloalkane dehalogenase at ph 8.2 VNG0601h cluster03 -> 1d2zA0 7.0423091 102 / 79 conP: 0.318 CATH-ID: 1.10.533.10 Death domain of pelle. Chain: a, c. Engineered: yes. Death domain of t VNG0601h cluster04 -> 1el6A3 5.8437457 109 / 79 conP: 0.237 CATH-ID: 3.30.70.570 Baseplate structural protein gp11. Chain: a, b, c. Engineered: yes VNG0601h cluster08 -> 1dorA1 10.900562 267 / 79 conP: 0.247 CATH-ID: 3.20.20.90 Dihydroorotate dehydrogenase a. Chain: a, b. Biological_unit: homodime --end-- VNG0604h one-of-top-five-correct: 0.592276969199412 CThresh: 5.433597 75 best_is: cluster16 VNG0604h cluster00 -> 1mtyD0 8.1688631 512 / 92 conP: 0.025 CATH-ID: 1.10.620.20 Methane monooxygenase hydroxylase. Chain: d, e, b, c, g, h. Biological VNG0604h cluster01 -> 1a9100 8.0878221 79 / 92 conP: 0.407 CATH-ID: 1.20.20.10 F1fo atpase subunit c. Chain: null. Synonym: proteolipid, dccd-binding VNG0604h cluster02 -> 1au1A0 7.1994270 166 / 92 conP: 0.215 CATH-ID: 1.20.120.210 Interferon-beta. Chain: a, b. Engineered: yes VNG0604h cluster03 -> 2occC2 7.1994270 191 / 92 conP: 0.185 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG0604h cluster04 -> 1ec5A0 7.1534013 48 / 92 conP: 0.399 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG0604h cluster16 -> 2occC2 10.689397 191 / 92 conP: 0.383 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG0608c one-of-top-five-correct: 0.689610034743336 CThresh: 6.998707 66 best_is: cluster18 VNG0608c cluster00 -> 2dri02 11.395922 146 / 136 conP: 0.593 CATH-ID: 3.40.50.2400 D-ribose-binding protein complexed with beta-d-ribose VNG0608c cluster01 -> 1onrA0 7.2703323 316 / 136 conP: 0.156 CATH-ID: 3.20.20.70 Transaldolase b. Chain: a, b. Engineered: yes VNG0608c cluster02 -> 1d9eA0 8.9890277 266 / 136 conP: 0.281 CATH-ID: 3.20.20.280 3-deoxy-d-manno-octulosonate 8-phosphate synthase. Chain: a, b, c, d. VNG0608c cluster03 -> 1hvxA 8.7195079 483 / 136 conP: 0.106 NO-CATH VNG0608c cluster04 -> 1reqA2 9.3187243 164 / 136 conP: 0.421 CATH-ID: 3.40.50.280 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de VNG0608c cluster18 -> 1a04A1 11.560512 124 / 136 conP: 0.631 CATH-ID: 3.40.50.3000 Nitrate/nitrite response regulator protein narl. Chain: a, b. Fragment --end-- VNG0612h one-of-top-five-correct: 0.369082032102747 CThresh: 3.236712 75 best_is: cluster14 VNG0612h cluster00 -> 1tgoA2 6.4045771 196 / 63 conP: 0.105 CATH-ID: 3.30.420.10 Thermostable b DNA polymerase. Chain: a. Engineered: yes VNG0612h cluster01 -> 1tgoA2 7.0568501 196 / 63 conP: 0.125 CATH-ID: 3.30.420.10 Thermostable b DNA polymerase. Chain: a. Engineered: yes VNG0612h cluster02 -> 2tpt01 7.2742744 107 / 63 conP: 0.289 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG0612h cluster03 -> 1aa7A2 7.7091231 78 / 63 conP: 0.389 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG0612h cluster04 -> 1b4uA0 6.4045771 132 / 63 conP: 0.194 CATH-ID: 1.10.700.10 Protocatechuate 4,5-dioxygenase. Chain: a, b, c, d. Fragment: chain a, VNG0612h cluster14 -> 1ocrE0 7.8634976 109 / 63 conP: 0.321 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG06152 one-of-top-five-correct: 0.299545286802034 CThresh: 5.084438 75 best_is: cluster06 VNG06152 cluster00 -> 2hgf00 5.3231093 97 / 77 conP: 0.186 CATH-ID: 3.50.4.10 Hepatocyte growth factor. Chain: null. Fragment: amino terminal domain VNG06152 cluster01 -> 1jqlA 6.0924333 366 / 77 conP: 0.024 NO-CATH VNG06152 cluster02 -> 1wit00 5.4784859 93 / 77 conP: 0.199 CATH-ID: 2.60.40.10 Twitchin 18th igsf module. Chain: null. Engineered: yes VNG06152 cluster03 -> 1i8iA 5.8877842 106 / 77 conP: 0.199 NO-CATH VNG06152 cluster04 -> 1atiA1 6.6062896 306 / 77 conP: 0.047 CATH-ID: 3.40.690.10 Glycyl-tRNA synthetase. Chain: a, b. Synonym: glycine-tRNA ligase. Oth VNG06152 cluster06 -> 1pea02 7.5249773 176 / 77 conP: 0.174 CATH-ID: 3.40.50.3800 Amidase operon. Chain: null. Fragment: amide receptor/negative regulat --end-- VNG06201 one-of-top-five-correct: 0.0393263971453918 CThresh: 4.110780 75 best_is: --end-- VNG0624h one-of-top-five-correct: 0.375501172031109 CThresh: 7.343503 25 best_is: cluster15 VNG0624h cluster00 -> 1cii03 5.9413983 157 / 108 conP: 0.150 CATH-ID: 1.10.490.30 Colicin ia. Chain: null. Engineered: yes. Biological_unit: monomer VNG0624h cluster01 -> 1bcfA0 6.0069190 158 / 108 conP: 0.152 CATH-ID: 1.20.120.190 Bacterioferritin (cytochrome b1) VNG0624h cluster02 -> 1ifa_ 5.7434997 158 / 108 conP: 0.142 NO-CATH VNG0624h cluster03 -> 1vin02 5.7566277 113 / 108 conP: 0.182 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG0624h cluster04 -> 1qazA0 7.6583914 351 / 108 conP: 0.076 CATH-ID: 1.50.40.20 Alginate lyase a1-iii. Chain: a. Engineered: yes. Biological_unit: mon VNG0624h cluster15 -> 1jzsA 8.7765005 821 / 108 conP: 0.005 NO-CATH --end-- VNG06271 one-of-top-five-correct: 0.429166348695442 CThresh: 2.792495 100 best_is: cluster04 VNG06271 cluster00 -> 1ayx00 7.3932622 492 / 70 conP: 0.012 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes VNG06271 cluster01 -> 1c3uA3 6.1254090 82 / 70 conP: 0.329 CATH-ID: 1.10.164.30 Adenylosuccinate lyase. Chain: a, b. Engineered: yes VNG06271 cluster02 -> 1bo1A1 6.5507375 166 / 70 conP: 0.193 CATH-ID: 3.30.800.10 Phosphatidylinositol phosphate kinase iibeta. Chain: a, b. Synonym: pi VNG06271 cluster03 -> 1pjr02 7.2429142 72 / 70 conP: 0.428 CATH-ID: 1.10.10.160 Pcra. Chain: null. Engineered: yes VNG06271 cluster04 -> 1g71A 8.1895121 344 / 70 conP: 0.061 NO-CATH --end-- VNG06360 one-of-top-five-correct: 0.204833038559477 CThresh: 6.966165 32 best_is: cluster18 VNG06360 cluster00 -> 1qckA0 5.6443591 89 / 91 conP: 0.180 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG06360 cluster01 -> 1cc8A0 6.0573320 72 / 91 conP: 0.220 CATH-ID: 3.30.70.100 Metallochaperone atx1. Chain: a. Engineered: yes VNG06360 cluster02 -> 1sbp02 4.5077193 158 / 91 conP: 0.085 CATH-ID: 3.40.190.10 Sulfate-binding protein VNG06360 cluster03 -> 1jli00 5.4460356 112 / 91 conP: 0.148 CATH-ID: 1.20.120.200 Interleukin 3. Chain: null. Synonym: multi-csf. Engineered: yes. Mutat VNG06360 cluster04 -> 3rubL1 5.0913179 122 / 91 conP: 0.127 CATH-ID: 3.30.70.150 Ribulose 1,5-bisphosphate carboxylase(slash)oxygenase (form III ) VNG06360 cluster18 -> 1sbp02 6.6719242 158 / 91 conP: 0.148 CATH-ID: 3.40.190.10 Sulfate-binding protein --end-- VNG06370 one-of-top-five-correct: 0.342642571917473 CThresh: 6.585631 75 best_is: cluster09 VNG06370 cluster00 -> 1iawA 6.3512883 304 / 97 conP: 0.063 NO-CATH VNG06370 cluster01 -> 1jud02 7.8104132 75 / 97 conP: 0.350 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG06370 cluster02 -> 1pprM1 8.1108969 155 / 97 conP: 0.248 CATH-ID: 1.40.10.10 Peridinin-chlorophyll protein. Chain: m, n, o. Synonym: pcp VNG06370 cluster03 -> 1e68A0 6.4415647 70 / 97 conP: 0.273 CATH-ID: 1.20.225.10 Bacteriocin as-48. Chain: a. Fragment: bacteriocin as-48 residue 36-10 VNG06370 cluster04 -> 1fnnA3 6.1789345 104 / 97 conP: 0.214 CATH-ID: 1.10.10.10 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG06370 cluster09 -> 1jkw01 8.2922053 176 / 97 conP: 0.229 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y --end-- VNG06371 one-of-top-five-correct: 0.193422370879532 CThresh: 5.894286 75 best_is: cluster14 VNG06371 cluster00 -> 1qr4A1 5.5096109 87 / 76 conP: 0.178 CATH-ID: 2.60.40.30 Tenascin. Chain: a, b. Fragment: fniii domains 5-6. Engineered: yes VNG06371 cluster01 -> 1dr9A1 4.3926488 105 / 76 conP: 0.117 CATH-ID: 2.60.40.10 T lymphocyte activation antigen. Chain: a. Fragment: extracellular reg VNG06371 cluster02 -> 1bp3B2 5.5096109 103 / 76 conP: 0.157 CATH-ID: 2.60.40.30 Growth hormone. Chain: a. Engineered: yes. Mutation: yes. Prolactin re VNG06371 cluster03 -> 1lcl00 4.2768481 141 / 76 conP: 0.084 CATH-ID: 2.60.120.60 Lysophospholipase. Chain: null. Synonym: charcot-leyden crystal protei VNG06371 cluster04 -> 2sli02 4.8932295 383 / 76 conP: 0.012 CATH-ID: 2.120.10.10 Intramolecular trans-sialidase. Chain: null. Fragment: devoid of n-ter VNG06371 cluster14 -> 1jpsH 6.3314528 213 / 76 conP: 0.079 NO-CATH --end-- VNG06460 one-of-top-five-correct: 0.515299791058309 CThresh: 3.052378 75 best_is: cluster09 VNG06460 cluster00 -> 1tys00 8.7270750 264 / 64 conP: 0.106 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG06460 cluster01 -> 1jkxA 7.6613066 209 / 64 conP: 0.138 NO-CATH VNG06460 cluster02 -> 1fmtA1 7.2285129 202 / 64 conP: 0.132 CATH-ID: 3.40.50.170 Methionyl-tRNA fmet formyltransferase. Chain: a, b. Synonym: 10-formyl VNG06460 cluster03 -> 1a6f00 6.3629255 113 / 64 conP: 0.239 CATH-ID: 3.30.230.10 Ribonuclease p protein. Chain: null. Synonym: rnase p protein. Enginee VNG06460 cluster04 -> 1crkA2 6.5793224 279 / 64 conP: 0.052 CATH-ID: 3.30.590.10 Creatine kinase. Chain: a, b, c, d. Biological_unit: octamer VNG06460 cluster09 -> 1b5dA0 9.3924813 246 / 64 conP: 0.149 CATH-ID: 3.30.572.10 Deoxycytidylate hydroxymethylase. Chain: a, b. Synonym: deoxycytidylat --end-- VNG06472 one-of-top-five-correct: 0.360701996316539 CThresh: 3.481176 75 best_is: cluster00 VNG06472 cluster00 -> 1a3aA0 7.8298290 145 / 65 conP: 0.240 CATH-ID: 3.40.930.10 Mannitol-specific eii. Chain: a, b, c, d. Fragment: iia domain, residu VNG06472 cluster01 -> 1a6jA0 6.4195216 150 / 65 conP: 0.166 CATH-ID: 3.40.930.10 Nitrogen regulatory iia protein. Chain: a, b. Synonym: iia-nitrogen, e VNG06472 cluster02 -> 1efuB2 6.3221028 86 / 65 conP: 0.279 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran VNG06472 cluster03 -> 1e79A3 5.4605450 131 / 65 conP: 0.156 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG06472 cluster04 -> 1mroA3 6.5374922 227 / 65 conP: 0.083 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: --end-- VNG0652h one-of-top-five-correct: 0.292198450139534 CThresh: 3.021920 75 best_is: cluster05 VNG0652h cluster00 -> 1in4A 6.4458751 298 / 48 conP: 0.013 NO-CATH VNG0652h cluster01 -> 1b25A2 5.7383489 178 / 48 conP: 0.057 CATH-ID: 1.10.569.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG0652h cluster02 -> 1b0pA6 6.2100330 385 / 48 conP: 0.003 CATH-ID: 3.40.50.970 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG0652h cluster03 -> 1d2zA0 6.9175592 102 / 48 conP: 0.205 CATH-ID: 1.10.533.10 Death domain of pelle. Chain: a, c. Engineered: yes. Death domain of t VNG0652h cluster04 -> 1ej5A0 5.0308228 107 / 48 conP: 0.122 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG0652h cluster05 -> 1c9bA2 7.1534013 106 / 48 conP: 0.207 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te --end-- VNG06541 one-of-top-five-correct: 0.230295362809029 CThresh: 5.544515 75 best_is: cluster18 VNG06541 cluster00 -> 1be3B2 5.7319448 204 / 82 conP: 0.092 CATH-ID: 3.30.830.10 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG06541 cluster01 -> 1qftA0 5.7319448 175 / 82 conP: 0.115 CATH-ID: 2.40.128.20 Female-specific histamine binding protein 2. Chain: a. Engineered: yes VNG06541 cluster02 -> 1bebA0 6.3503005 156 / 82 conP: 0.155 CATH-ID: 2.40.128.20 Beta-lactoglobulin. Chain: a, b. Biological_unit: predominantly dimeri VNG06541 cluster03 -> 1gcuA2 6.3503005 148 / 82 conP: 0.164 CATH-ID: 3.30.360.10 Biliverdin reductase a. Chain: a. Engineered: yes VNG06541 cluster04 -> 1jjcA0 6.1335139 266 / 82 conP: 0.063 CATH-ID: 3.40.690.10 Phenylalanyl-tRNA synthetase alpha chain. Chain: a. Fragment: alpha ch VNG06541 cluster18 -> 1mpgA1 6.6419725 112 / 82 conP: 0.224 CATH-ID: 3.30.310.20 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine --end-- VNG0656h one-of-top-five-correct: 0.243710811251534 CThresh: 6.757725 75 best_is: cluster07 VNG0656h cluster00 -> 2hvm00 6.7745971 273 / 78 conP: 0.048 CATH-ID: 3.20.20.80 Hevamine. Chain: null. Synonym: chitinase/lysozyme. Ec: 3.2.1.14, 3.2. VNG0656h cluster01 -> 1dekA2 6.0733971 121 / 78 conP: 0.138 CATH-ID: 1.10.238.70 Deoxynucleoside monophosphate kinase. Chain: a, b. Engineered: yes VNG0656h cluster02 -> 2end00 5.9664954 137 / 78 conP: 0.118 CATH-ID: 1.10.440.10 Endonuclease v VNG0656h cluster03 -> 1csc02 6.4671364 112 / 78 conP: 0.162 CATH-ID: 1.10.230.10 Citrate synthase l-malate - carboxymethyl coenzyme A complex VNG0656h cluster04 -> 1hwxA1 5.3602307 51 / 78 conP: 0.196 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG0656h cluster07 -> 1abv00 7.4863919 105 / 78 conP: 0.217 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi --end-- VNG0659h one-of-top-five-correct: 0.477445316808095 CThresh: 5.182291 75 best_is: cluster08 VNG0659h cluster00 -> 1a7602 6.2252623 60 / 74 conP: 0.280 CATH-ID: 1.10.150.20 Flap endonuclease-1 protein. Chain: null VNG0659h cluster01 -> 1aa7A1 7.7057378 79 / 74 conP: 0.333 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG0659h cluster02 -> 1dpe03 6.8162340 219 / 74 conP: 0.093 CATH-ID: 3.10.105.10 Dipeptide-binding protein. Chain: null. Synonym: dipeptide permease VNG0659h cluster03 -> 1colA0 8.4732312 197 / 74 conP: 0.169 CATH-ID: 1.10.490.30 Colicin A (c-terminal domain) (pore-forming domain) VNG0659h cluster04 -> 1qj2A2 5.5734860 82 / 74 conP: 0.207 CATH-ID: 1.10.150.120 Carbon monoxide dehydrogenase. Chain: a, g. Carbon monoxide dehydrogen VNG0659h cluster08 -> 2hmqA0 9.7159792 113 / 74 conP: 0.392 CATH-ID: 1.20.120.50 Hemerythrin (met) --end-- VNG0660h one-of-top-five-correct: 0.428313367101295 CThresh: 8.678880 25 best_is: cluster13 VNG0660h cluster00 -> 2ng101 5.5334008 89 / 127 conP: 0.183 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG0660h cluster01 -> 1bmtA1 7.9545061 87 / 127 conP: 0.313 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG0660h cluster02 -> 1kdxA0 5.8751760 81 / 127 conP: 0.205 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG0660h cluster03 -> 1bg8A0 6.8441284 76 / 127 conP: 0.260 CATH-ID: 1.10.890.10 Hdea. Chain: a, b, c. Synonym: 10k-s protein, hypothetical protein a VNG0660h cluster04 -> 1fts01 7.4669250 84 / 127 conP: 0.287 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG0660h cluster13 -> 1jdfA 9.5516024 442 / 127 conP: 0.093 NO-CATH --end-- VNG06660 one-of-top-five-correct: 0.628676754057468 CThresh: 6.987192 32 best_is: cluster02 VNG06660 cluster00 -> 1c17M0 9.9727243 142 / 122 conP: 0.452 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG06660 cluster01 -> 1am300 7.1826310 70 / 122 conP: 0.358 CATH-ID: 1.10.1200.30 HIV capsid. Chain: null. Fragment: c-terminal domain, residues 151 - 2 VNG06660 cluster02 -> 1ffyA3 11.130136 254 / 122 conP: 0.377 CATH-ID: 1.10.730.10 Isoleucyl-tRNA synthetase. Chain: a. Synonym: isoleucine--tRNA ligase, VNG06660 cluster03 -> 1fpoA 10.346859 171 / 122 conP: 0.438 NO-CATH VNG06660 cluster04 -> 2a3dA0 7.8940306 73 / 122 conP: 0.402 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG06741 one-of-top-five-correct: 0.609300604873714 CThresh: 3.134951 75 best_is: cluster08 VNG06741 cluster00 -> 1qrjB2 7.3743731 81 / 101 conP: 0.510 CATH-ID: 1.10.1200.30 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG06741 cluster01 -> 1d1dA2 9.0294546 80 / 101 conP: 0.628 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG06741 cluster02 -> 1fftC0 6.6240080 185 / 101 conP: 0.290 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG06741 cluster03 -> 1d1dA2 8.6248678 80 / 101 conP: 0.600 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG06741 cluster04 -> 1qrjB2 7.3743731 81 / 101 conP: 0.510 CATH-ID: 1.10.1200.30 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG06741 cluster08 -> 1d1dA2 9.6363348 80 / 101 conP: 0.668 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes --end-- VNG0676c one-of-top-five-correct: 0.2928722098475 CThresh: 7.371396 25 best_is: cluster09 VNG0676c cluster00 -> 1av401 6.6827657 87 / 126 conP: 0.296 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG0676c cluster01 -> 1qmhA2 5.2858508 91 / 126 conP: 0.215 CATH-ID: 3.30.360.20 RNA 3'-terminal phosphate cyclase. Chain: a, b. Engineered: yes VNG0676c cluster02 -> 1de4C1 5.2212008 307 / 126 conP: 0.075 CATH-ID: 3.40.630.10 Hemochromatosis protein. Chain: a, d, g. Fragment: ectodomain. Synonym VNG0676c cluster03 -> 1di2A0 5.5319096 69 / 126 conP: 0.250 CATH-ID: 3.30.160.20 Double stranded RNA binding protein a. Chain: a, b. Fragment: second d VNG0676c cluster04 -> 1b9hA2 4.8210281 139 / 126 conP: 0.155 CATH-ID: 3.30.70.160 3-amino-5-hydroxybenzoic acid synthase. Chain: a. Synonym: ahba syntha VNG0676c cluster09 -> 1ospO2 7.3587552 76 / 126 conP: 0.351 CATH-ID: 2.20.50.10 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os --end-- VNG0677h one-of-top-five-correct: 0.361655424043705 CThresh: 6.993651 61 best_is: cluster07 VNG0677h cluster00 -> 1hp800 6.8180843 68 / 94 conP: 0.272 CATH-ID: 1.10.810.10 Hu-p8. Chain: null. Engineered: synthetic gene. Mutation: n-terminal i VNG0677h cluster01 -> 1avpA0 7.9077387 204 / 94 conP: 0.157 CATH-ID: 3.40.395.10 Adenoviral proteinase. Chain: a. Fragment: main. Synonym: avp. Enginee VNG0677h cluster02 -> 2tpsA0 5.3085446 226 / 94 conP: 0.069 CATH-ID: 3.20.20.90 Thiamin phosphate synthase. Chain: a, b. Biological_unit: monomer. Oth VNG0677h cluster03 -> 1eal00 5.9106584 127 / 94 conP: 0.156 CATH-ID: 2.40.128.20 Ileal lipid binding protein. Chain: null. Synonym: gastrotropin. Engin VNG0677h cluster04 -> 1ijqA0 5.8298407 308 / 94 conP: 0.045 CATH-ID: 2.130.10.20 Low-density lipoprotein receptor. Chain: a, b. Fragment: ywtd-e3 domai VNG0677h cluster07 -> 1qazA0 8.7737438 351 / 94 conP: 0.074 CATH-ID: 1.50.40.20 Alginate lyase a1-iii. Chain: a. Engineered: yes. Biological_unit: mon --end-- VNG06901 one-of-top-five-correct: 0.512311074213076 CThresh: 8.018797 25 best_is: cluster14 VNG06901 cluster00 -> 1b3qA1 8.1948677 62 / 134 conP: 0.410 CATH-ID: 1.20.15.220 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG06901 cluster01 -> 1dkxA2 7.6134008 80 / 134 conP: 0.348 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG06901 cluster02 -> 1dowA 8.2432448 200 / 134 conP: 0.255 NO-CATH VNG06901 cluster03 -> 1dkxA2 7.4111074 80 / 134 conP: 0.335 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG06901 cluster04 -> 1fpoA 9.0531888 171 / 134 conP: 0.335 NO-CATH VNG06901 cluster14 -> 1jgjA0 10.018124 217 / 134 conP: 0.343 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes --end-- VNG0697h one-of-top-five-correct: 0.152456692630607 CThresh: 3.002673 99 best_is: cluster17 VNG0697h cluster00 -> 3vub00 4.3569731 101 / 37 conP: 0.070 CATH-ID: 2.30.30.150 Ccdb. Chain: null. Engineered: yes. Biological_unit: dimer VNG0697h cluster01 -> 1a0p02 4.6116387 180 / 37 conP: 0.018 CATH-ID: 1.10.443.10 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG0697h cluster02 -> 1iow02 4.3569731 149 / 37 conP: 0.029 CATH-ID: 3.30.470.20 D-ala\:d-ala ligase. Chain: null. Synonym: dd-ligase, ddlb. Engineered VNG0697h cluster03 -> 1dpe02 4.1023074 119 / 37 conP: 0.047 CATH-ID: 3.40.191.30 Dipeptide-binding protein. Chain: null. Synonym: dipeptide permease VNG0697h cluster04 -> 1a0oF0 4.1023074 69 / 37 conP: 0.114 CATH-ID: 3.30.70.400 Chey. Chain: a, c, e, g. Engineered: yes. Chea. Chain: b, d, f, h. Fra VNG0697h cluster17 -> 1qmuA1 5.1209701 301 / 37 conP: 0.002 CATH-ID: 3.40.630.10 Carboxypeptidase gp180 residues 503-882. Chain: a. Fragment: yes. Engi --end-- VNG06981 one-of-top-five-correct: 0.472048564730054 CThresh: 2.947000 100 best_is: cluster11 VNG06981 cluster00 -> 1vig00 6.7554423 71 / 60 conP: 0.345 CATH-ID: 3.30.70.210 Vigilin. Chain: null. Fragment: kh6, residues 432 to 501. Engineered: VNG06981 cluster01 -> 1psdA3 8.5205200 82 / 60 conP: 0.435 CATH-ID: 3.30.70.260 D-3-phosphoglycerate dehydrogenase (phosphoglycerate dehydrogenase) VNG06981 cluster02 -> 1psdA3 8.9617895 82 / 60 conP: 0.466 CATH-ID: 3.30.70.260 D-3-phosphoglycerate dehydrogenase (phosphoglycerate dehydrogenase) VNG06981 cluster03 -> 1fjcA0 7.4173465 96 / 60 conP: 0.322 CATH-ID: 3.30.70.330 Nucleolin rbd2. Chain: a. Synonym: protein c23. Engineered: yes VNG06981 cluster04 -> 1bowA0 7.1967117 143 / 60 conP: 0.205 CATH-ID: 3.20.80.10 Multidrug-efflux transporter 1 regulator bmrr. Chain: a. Fragment: mul VNG06981 cluster11 -> 1b6400 8.9617895 91 / 60 conP: 0.440 CATH-ID: 3.30.70.60 Elongation factor 1-beta. Chain: null. Fragment: guanine exchange fact --end-- VNG07002 one-of-top-five-correct: 0.346441041223086 CThresh: 6.683558 75 best_is: cluster16 VNG07002 cluster00 -> 1lki00 6.6397526 172 / 97 conP: 0.157 CATH-ID: 1.20.120.200 Leukemia inhibitory factor (lif) VNG07002 cluster01 -> 1pmt02 7.1769650 107 / 97 conP: 0.258 CATH-ID: 1.20.1050.10 Glutathione transferase. Chain: null. Synonym: pmgst, gst b1-1. Engine VNG07002 cluster02 -> 1ehkA0 6.4747774 544 / 97 conP: 0.012 CATH-ID: 1.20.210.20 Ba3-type cytochromE-C oxidase. Chain: a. Fragment: subunit i. Ba3-type VNG07002 cluster03 -> 2gsaA1 5.7116236 178 / 97 conP: 0.120 CATH-ID: 3.30.70.160 Glutamate semialdehyde aminotransferase. Chain: a, b. Synonym: glutama VNG07002 cluster04 -> 1fjgB1 6.6655659 175 / 97 conP: 0.155 CATH-TRUNC VNG07002 cluster16 -> 1g3sA 8.3826619 212 / 97 conP: 0.187 NO-CATH --end-- VNG07004 one-of-top-five-correct: 0.0227989726500031 CThresh: 7.052781 25 best_is: --end-- VNG0702h one-of-top-five-correct: 0.469820006135541 CThresh: 3.004569 82 best_is: cluster14 VNG0702h cluster00 -> 1pytA0 6.8831284 92 / 67 conP: 0.331 CATH-ID: 3.30.70.340 Procarboxypeptidase a. Chain: a, b. Proproteinase e. Chain: c. Chymotr VNG0702h cluster01 -> 1aw000 6.7652840 72 / 67 conP: 0.371 CATH-ID: 3.30.70.100 Menkes copper-transporting atpase. Chain: null. Fragment: fourth metal VNG0702h cluster02 -> 1gtxA1 6.2428316 167 / 67 conP: 0.158 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG0702h cluster03 -> 1kp6A0 6.5540825 79 / 67 conP: 0.340 CATH-ID: 3.30.70.440 Toxin. Chain: a VNG0702h cluster04 -> 1a3wA1 7.7368575 155 / 67 conP: 0.247 CATH-ID: 3.40.50.50 Pyruvate kinase. Chain: a, b. Biological_unit: tetramer VNG0702h cluster14 -> 1cc8A0 8.8040188 72 / 67 conP: 0.515 CATH-ID: 3.30.70.100 Metallochaperone atx1. Chain: a. Engineered: yes --end-- VNG0703h one-of-top-five-correct: 0.441038572960548 CThresh: 5.353972 75 best_is: cluster05 VNG0703h cluster00 -> 1dpuA0 8.1700819 69 / 93 conP: 0.439 CATH-ID: 1.10.10.10 Replication protein a (rpa32) c-terminal domain. Chain: a. Fragment: c VNG0703h cluster01 -> 1sfe02 7.5615109 84 / 93 conP: 0.370 CATH-ID: 1.10.10.10 Ada o6-methylguanine-DNA methyltransferase. Chain: null. Fragment: c-t VNG0703h cluster02 -> 1bgw05 7.7478716 253 / 93 conP: 0.148 CATH-ID: 3.90.199.10 Topoisomerase. Chain: null. Fragment: residues 410 - 1202. Engineered: VNG0703h cluster03 -> 1bia01 7.8777034 64 / 93 conP: 0.428 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0703h cluster04 -> 1dpuA0 7.1555663 69 / 93 conP: 0.369 CATH-ID: 1.10.10.10 Replication protein a (rpa32) c-terminal domain. Chain: a. Fragment: c VNG0703h cluster05 -> 1bia01 8.9596877 64 / 93 conP: 0.505 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG0704c one-of-top-five-correct: 0.62194952639746 CThresh: 6.991275 52 best_is: cluster00 VNG0704c cluster00 -> 1smtB0 11.053384 101 / 122 conP: 0.588 CATH-ID: 1.10.10.10 Transcriptional repressor smtb. Chain: a, b. Engineered: yes. Biologic VNG0704c cluster01 -> 1smtB0 10.002598 101 / 122 conP: 0.513 CATH-ID: 1.10.10.10 Transcriptional repressor smtb. Chain: a, b. Engineered: yes. Biologic VNG0704c cluster02 -> 1bia01 9.2412852 64 / 122 conP: 0.511 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0704c cluster03 -> 1smtB0 7.8195968 101 / 122 conP: 0.359 CATH-ID: 1.10.10.10 Transcriptional repressor smtb. Chain: a, b. Engineered: yes. Biologic VNG0704c cluster04 -> 1bia01 8.3851769 64 / 122 conP: 0.449 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG07051 one-of-top-five-correct: 0.335954212140053 CThresh: 3.189613 75 best_is: cluster01 VNG07051 cluster00 -> 1nkl00 6.8257166 78 / 65 conP: 0.342 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG07051 cluster01 -> 1a6q02 7.3990501 69 / 65 conP: 0.403 CATH-ID: 1.10.920.10 Phosphatase 2c. Chain: null. Engineered: yes VNG07051 cluster02 -> 1csh01 7.1836606 306 / 65 conP: 0.047 CATH-ID: 1.10.580.10 Citrate synthase complexed with oxaloacetate and amidocarboxymethyldet VNG07051 cluster03 -> 1b4fA0 6.9330855 74 / 65 conP: 0.359 CATH-ID: 1.10.150.50 Ephb2. Chain: a, b, c, d, e, f, g, h. Fragment: sam domain. Engineered VNG07051 cluster04 -> 1aab00 6.1067133 83 / 65 conP: 0.286 CATH-ID: 1.10.30.10 High mobility group protein. Chain: null. Fragment: fragment a (residu --end-- VNG07161 one-of-top-five-correct: 0.0229991745783155 CThresh: 6.998769 53 best_is: --end-- VNG07162 one-of-top-five-correct: 0.0436626910316455 CThresh: 3.000195 98 best_is: --end-- VNG0717h one-of-top-five-correct: 0.274345458829206 CThresh: 6.998967 34 best_is: cluster16 VNG0717h cluster00 -> 1c07A0 5.9547849 95 / 107 conP: 0.221 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm VNG0717h cluster01 -> 1j7rA0 6.2056197 77 / 107 conP: 0.255 CATH-ID: 1.10.238.10 Calcium vector protein. Chain: a. Fragment: n-terminal domain (residue VNG0717h cluster02 -> 1bmtA2 4.9232018 158 / 107 conP: 0.122 CATH-ID: 3.40.50.280 Methionine synthase (b12-binding domains) VNG0717h cluster03 -> 1j4nA 5.1666738 249 / 107 conP: 0.076 NO-CATH VNG0717h cluster04 -> 1d8jA0 6.1651748 81 / 107 conP: 0.248 CATH-ID: 1.10.10.10 General transcription factor tfiie-beta. Chain: a. Fragment: central c VNG0717h cluster16 -> 1j7rA0 7.3727968 77 / 107 conP: 0.324 CATH-ID: 1.10.238.10 Calcium vector protein. Chain: a. Fragment: n-terminal domain (residue --end-- VNG07200 one-of-top-five-correct: 0.0153341152640561 CThresh: 9.492960 25 best_is: --end-- VNG07201 one-of-top-five-correct: 0.0199089687978625 CThresh: 7.888809 25 best_is: --end-- VNG0724h one-of-top-five-correct: 0.45221480325955 CThresh: 6.809054 75 best_is: cluster08 VNG0724h cluster00 -> 1cgo00 9.0205708 125 / 85 conP: 0.291 CATH-ID: 1.20.120.10 Cytochrome c' VNG0724h cluster01 -> 1k62A 6.3673688 450 / 85 conP: 0.013 NO-CATH VNG0724h cluster02 -> 2a3dA0 7.8357571 73 / 85 conP: 0.309 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG0724h cluster03 -> 1jciA 7.5325840 294 / 85 conP: 0.062 NO-CATH VNG0724h cluster04 -> 1trlA0 6.8840319 62 / 85 conP: 0.271 CATH-ID: 1.10.390.10 Thermolysin fragment 255 - 316 (nmr, 8 structures) VNG0724h cluster08 -> 1fapB0 9.9255443 95 / 85 conP: 0.405 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra --end-- VNG07270 one-of-top-five-correct: 0.802954819114222 CThresh: 6.942673 35 best_is: cluster16 VNG07270 cluster00 -> 2occC1 8.8676803 70 / 161 conP: 0.568 CATH-ID: 1.20.15.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG07270 cluster01 -> 1ez3A0 7.9355298 124 / 161 conP: 0.443 CATH-ID: 1.20.1040.20 Syntaxin-1a. Chain: a, b, c. Fragment: n-terminal domain. Synonym: syn VNG07270 cluster02 -> 1nfn00 9.6085570 132 / 161 conP: 0.555 CATH-ID: 1.20.120.20 Apolipoprotein e3. Chain: null. Fragment: 22kd receptor binding domain VNG07270 cluster03 -> 1dg3A1 7.1788848 300 / 161 conP: 0.229 CATH-ID: 1.20.1000.10 Interferon-induced guanylate-binding protein 1. Chain: a. Fragment: fu VNG07270 cluster04 -> 1bucA3 9.6115032 141 / 161 conP: 0.545 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG07270 cluster16 -> 1jqcA0 12.626359 340 / 161 conP: 0.546 CATH-ID: 1.10.620.20 Protein r2 of ribonucleotide reductase. Chain: a, b. Synonym: ribonucl --end-- VNG07271 one-of-top-five-correct: 0.433285547968176 CThresh: 3.264725 75 best_is: cluster15 VNG07271 cluster00 -> 1g71A 6.0101414 344 / 62 conP: 0.019 NO-CATH VNG07271 cluster01 -> 1pbe01 7.3209771 231 / 62 conP: 0.090 CATH-ID: 3.50.50.60 P-hydroxybenzoate hydroxylase (phbh) complexed with p-hydroxybenzoic a VNG07271 cluster02 -> 1vin02 5.7916687 113 / 62 conP: 0.194 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG07271 cluster03 -> 1derA1 6.4978235 250 / 62 conP: 0.059 CATH-ID: 1.10.560.10 Groel. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n. Engineered: ye VNG07271 cluster04 -> 1vin01 6.4470866 139 / 62 conP: 0.178 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG07271 cluster15 -> 1lre00 8.6318129 81 / 62 conP: 0.439 CATH-ID: 1.20.81.10 Receptor-associated protein. Chain: null. Fragment: n-terminal domain, --end-- VNG07272 one-of-top-five-correct: 0.728727731902654 CThresh: 6.965579 72 best_is: cluster00 VNG07272 cluster00 -> 1cxzB0 11.359415 86 / 167 conP: 0.726 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid VNG07272 cluster01 -> 1joyA0 8.1637220 67 / 167 conP: 0.533 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG07272 cluster02 -> 1cxzB0 8.9643520 86 / 167 conP: 0.570 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid VNG07272 cluster03 -> 1a9100 11.306694 79 / 167 conP: 0.729 CATH-ID: 1.20.20.10 F1fo atpase subunit c. Chain: null. Synonym: proteolipid, dccd-binding VNG07272 cluster04 -> 1cxzB0 8.5844543 86 / 167 conP: 0.543 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid --end-- VNG07351 one-of-top-five-correct: 0.285932317142699 CThresh: 3.649829 75 best_is: cluster00 VNG07351 cluster00 -> 1nal10 7.1725275 291 / 56 conP: 0.029 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 VNG07351 cluster01 -> 1bq7A0 5.8210601 186 / 56 conP: 0.069 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG07351 cluster02 -> 1exnA1 4.5637760 79 / 56 conP: 0.165 CATH-ID: 1.10.150.20 5'-exonuclease. Chain: a, b. Synonym: 5'-nuclease. 5'-3' exonuclease. VNG07351 cluster03 -> 1sly03 5.3705710 173 / 56 conP: 0.072 CATH-ID: 1.10.530.10 70-kda soluble lytic transglycosylase. Chain: null. Synonym: slt70, ex VNG07351 cluster04 -> 2cblA2 5.5958156 89 / 56 conP: 0.190 CATH-ID: 1.10.238.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 --end-- VNG0737h one-of-top-five-correct: 0.311908508695676 CThresh: 5.345739 75 best_is: cluster18 VNG0737h cluster00 -> 2tpt01 7.3647714 107 / 73 conP: 0.246 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG0737h cluster01 -> 1guxB0 5.8142472 141 / 73 conP: 0.131 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG0737h cluster02 -> 2tct01 5.7371282 65 / 73 conP: 0.234 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG0737h cluster03 -> 1fp1D 6.4381822 340 / 73 conP: 0.026 NO-CATH VNG0737h cluster04 -> 1ag200 6.3977893 103 / 73 conP: 0.205 CATH-ID: 1.10.790.10 Major prion protein. Chain: null. Fragment: domain 121 - 231. Synonym: VNG0737h cluster18 -> 1cy5A0 7.8940306 92 / 73 conP: 0.305 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re --end-- VNG0741h one-of-top-five-correct: 0.418835735709516 CThresh: 5.630963 75 best_is: cluster10 VNG0741h cluster00 -> 1csh01 5.4528411 306 / 99 conP: 0.063 CATH-ID: 1.10.580.10 Citrate synthase complexed with oxaloacetate and amidocarboxymethyldet VNG0741h cluster01 -> 1de4C1 6.5337821 307 / 99 conP: 0.084 CATH-ID: 3.40.630.10 Hemochromatosis protein. Chain: a, d, g. Fragment: ectodomain. Synonym VNG0741h cluster02 -> 1l5vA 7.2449346 796 / 99 conP: 0.004 NO-CATH VNG0741h cluster03 -> 1cg2A1 6.0410362 279 / 99 conP: 0.088 CATH-ID: 3.40.630.10 Carboxypeptidase g2. Chain: a, b, c, d. Engineered: yes. Biological_un VNG0741h cluster04 -> 1fpoA 6.7220542 171 / 99 conP: 0.202 NO-CATH VNG0741h cluster10 -> 1bif01 8.7006427 206 / 99 conP: 0.259 CATH-ID: 3.40.50.300 6-phosphofructo-2-kinase/ fructose-2,6-bisphosphatase. Chain: null. En --end-- VNG0751c one-of-top-five-correct: 0.257569196370733 CThresh: 7.169012 25 best_is: cluster04 VNG0751c cluster00 -> 1c82A 6.2444155 719 / 103 conP: 0.004 NO-CATH VNG0751c cluster01 -> 2antI2 4.6294199 256 / 103 conP: 0.056 CATH-ID: 3.30.497.10 Antithrombin. Chain: l, i. Biological_unit: monomer. Other_details: an VNG0751c cluster02 -> 1eo0A0 5.3895366 77 / 103 conP: 0.199 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En VNG0751c cluster03 -> 1cfh00 5.5524610 47 / 103 conP: 0.242 CATH-ID: 4.10.750.10 Coagulation factor ix (the gla and aromatic amino acid stack domains f VNG0751c cluster04 -> 1jwfA 7.3056876 139 / 103 conP: 0.221 NO-CATH --end-- VNG07540 one-of-top-five-correct: 0.401309769532031 CThresh: 5.078900 75 best_is: cluster02 VNG07540 cluster00 -> 1gdz00 7.7296265 151 / 77 conP: 0.219 CATH-ID: 1.10.375.10 Human immunodeficiency virus type 1 capsid protein. Chain: null. Fragm VNG07540 cluster01 -> 1ej4A0 5.8877842 179 / 77 conP: 0.113 CATH-ID: 3.30.760.10 Eukaryotic initiation factor 4e. Chain: a. Fragment: residues 28-217. VNG07540 cluster02 -> 3erdA0 8.7528722 245 / 77 conP: 0.138 CATH-ID: 1.10.565.10 Estrogen receptor alpha. Chain: a, b. Fragment: ligand-binding domain. VNG07540 cluster03 -> 1jinA0 7.1156790 403 / 77 conP: 0.023 CATH-ID: 1.10.630.10 Cytochrome p450 107a1. Chain: a. Synonym: 6-deoxyerythronolide b hydro VNG07540 cluster04 -> 1de6A0 7.7296265 416 / 77 conP: 0.025 CATH-ID: 3.20.20.310 L-rhamnose isomerase. Chain: a, b, c, d. Engineered: yes --end-- VNG07611 one-of-top-five-correct: 0.635968200097619 CThresh: 2.847078 100 best_is: cluster14 VNG07611 cluster00 -> 1db3A0 7.6902430 335 / 78 conP: 0.083 CATH-ID: 3.40.50.720 Gdp-mannose 4,6-dehydratase. Chain: a. Engineered: yes VNG07611 cluster01 -> 1dctA1 9.7287539 173 / 78 conP: 0.410 CATH-ID: 3.40.50.150 DNA (cytosine-5) methylase from haeiii. Chain: a, b. Synonym: methyltr VNG07611 cluster02 -> 1diiA1 5.8555831 231 / 78 conP: 0.119 CATH-ID: 3.40.462.10 P-cresol methylhydroxylase. Chain: a, b. Fragment: flavoprotein subuni VNG07611 cluster03 -> 1db3A0 7.0786897 335 / 78 conP: 0.070 CATH-ID: 3.40.50.720 Gdp-mannose 4,6-dehydratase. Chain: a. Engineered: yes VNG07611 cluster04 -> 1dar04 8.0979451 119 / 78 conP: 0.413 CATH-ID: 3.30.230.10 Elongation factor g. Chain: null. Synonym: ef-g VNG07611 cluster14 -> 1qd9A0 10.340307 124 / 78 conP: 0.563 CATH-ID: 3.30.70.130 Purine regulatory protein yabj. Chain: a, b, c. Engineered: yes --end-- VNG0762h one-of-top-five-correct: 0.186923609363393 CThresh: 1.040655 100 best_is: cluster06 VNG0762h cluster00 -> 1sknP0 4.6688540 74 / 36 conP: 0.170 CATH-ID: 1.10.880.10 Transcription factor skn-1. Chain: p. Fragment: binding domain. Engine VNG0762h cluster01 -> 1fchA0 4.1554256 302 / 36 conP: 0.002 CATH-ID: 1.25.40.140 Peroxisomal targeting signal 1 receptor. Chain: a, b. Fragment: c-term VNG0762h cluster02 -> 1sknP0 4.6688540 74 / 36 conP: 0.170 CATH-ID: 1.10.880.10 Transcription factor skn-1. Chain: p. Fragment: binding domain. Engine VNG0762h cluster03 -> 1sknP0 4.4121398 74 / 36 conP: 0.160 CATH-ID: 1.10.880.10 Transcription factor skn-1. Chain: p. Fragment: binding domain. Engine VNG0762h cluster04 -> 1qk9A0 3.8987114 92 / 36 conP: 0.103 CATH-ID: 3.30.890.10 Methyl-cpg-binding protein 2. Chain: a. Fragment: mcpg binding domain VNG0762h cluster06 -> 1sknP0 4.9255682 74 / 36 conP: 0.180 CATH-ID: 1.10.880.10 Transcription factor skn-1. Chain: p. Fragment: binding domain. Engine --end-- VNG07630 one-of-top-five-correct: 0.037504005581682 CThresh: 3.002778 82 best_is: --end-- VNG0765h one-of-top-five-correct: 0.280021572157104 CThresh: 5.246099 75 best_is: cluster05 VNG0765h cluster00 -> 1gtmA2 6.3150175 238 / 57 conP: 0.032 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a, b, c. Biological_unit: homohexamer VNG0765h cluster01 -> 1f37A0 4.9872601 109 / 57 conP: 0.100 CATH-ID: 3.40.30.10 Ferredoxin [2fe-2s]. Chain: a, b. Engineered: yes VNG0765h cluster02 -> 1es8A0 4.8812285 192 / 57 conP: 0.037 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes VNG0765h cluster03 -> 1rthA2 6.6736612 94 / 57 conP: 0.178 CATH-ID: 3.30.70.270 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere VNG0765h cluster04 -> 1aroP3 5.7774449 150 / 57 conP: 0.077 CATH-ID: 3.30.70.370 T7 RNA polymerase. Chain: p. Engineered: yes. Mutation: c347s, c723s, VNG0765h cluster05 -> 3pte00 7.7939316 347 / 57 conP: 0.013 CATH-ID: 3.40.710.10 D-alanyl-d-alanine carboxypeptidase/transpeptidase --end-- VNG07660 one-of-top-five-correct: 0.036176407392655 CThresh: 3.228653 75 best_is: --end-- VNG0767h one-of-top-five-correct: 0.452715992443907 CThresh: 2.589704 100 best_is: cluster17 VNG0767h cluster00 -> 1qqeA0 7.2950264 281 / 58 conP: 0.048 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG0767h cluster01 -> 1jzsA 6.8492472 821 / 58 conP: 0.000 NO-CATH VNG0767h cluster02 -> 1h6pA 7.2947360 188 / 58 conP: 0.135 NO-CATH VNG0767h cluster03 -> 1bs2A2 7.2950264 125 / 58 conP: 0.250 CATH-ID: 1.20.1010.10 Arginyl-tRNA synthetase. Chain: a. Synonym: argrs, arginine - tRNA lig VNG0767h cluster04 -> 1cpy02 6.9324823 72 / 58 conP: 0.362 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a VNG0767h cluster17 -> 1qgkA 8.6323640 876 / 58 conP: 0.000 NO-CATH --end-- VNG0768h one-of-top-five-correct: 0.398504580530437 CThresh: 3.496018 75 best_is: cluster08 VNG0768h cluster00 -> 1qgpA0 7.1364653 76 / 73 conP: 0.385 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d VNG0768h cluster01 -> 1dq3A4 6.8429362 114 / 73 conP: 0.286 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG0768h cluster02 -> 1kkrA 7.4548913 401 / 73 conP: 0.030 NO-CATH VNG0768h cluster03 -> 1ft1A0 6.5305400 315 / 73 conP: 0.050 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG0768h cluster04 -> 1ft1A0 6.7325151 315 / 73 conP: 0.053 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG0768h cluster08 -> 1bia01 8.0941003 64 / 73 conP: 0.481 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG0769h one-of-top-five-correct: 0.161789327513106 CThresh: 10.418718 25 best_is: cluster00 VNG0769h cluster00 -> 1dn1A4 6.4456872 198 / 135 conP: 0.108 CATH-ID: 3.40.50.1910 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG0769h cluster01 -> 1jxpA1 5.9535469 88 / 135 conP: 0.157 CATH-ID: 2.40.10.120 Ns3 serine protease. Chain: a, b. Synonym: hydrolase. Engineered: yes. VNG0769h cluster02 -> 1mla02 4.3380082 232 / 135 conP: 0.053 CATH-ID: 3.40.366.10 Malonyl-coenzyme a acyl carrier protein transacylase. Chain: null. Syn VNG0769h cluster03 -> 4monA 4.0167388 44 / 135 conP: 0.118 NO-CATH VNG0769h cluster04 -> 1cbg00 4.4254293 490 / 135 conP: 0.015 CATH-ID: 3.20.20.80 Cyanogenic beta-glucosidase. Chain: null. Ec: 3.2.1.21 --end-- VNG0772h one-of-top-five-correct: 0.384114969418526 CThresh: 6.230430 75 best_is: cluster01 VNG0772h cluster00 -> 1crkA2 6.0117153 279 / 86 conP: 0.054 CATH-ID: 3.30.590.10 Creatine kinase. Chain: a, b, c, d. Biological_unit: octamer VNG0772h cluster01 -> 1alo07 8.8727702 201 / 86 conP: 0.197 CATH-ID: 3.30.365.10 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG0772h cluster02 -> 1ad201 6.8033273 121 / 86 conP: 0.206 CATH-ID: 3.30.190.20 Ribosomal protein l1. Chain: null. Synonym: tl2. Engineered: yes. Muta VNG0772h cluster03 -> 2kfnA1 5.4551646 217 / 86 conP: 0.074 CATH-ID: 3.30.420.10 Klenow fragment. Chain: a. Synonym: large fragment. Engineered: yes. B VNG0772h cluster04 -> 1dqwA0 6.2096183 267 / 86 conP: 0.062 CATH-ID: 3.20.20.90 Orotidine 5'-phosphate decarboxylase. Chain: a, b, c, d. Engineered: y --end-- VNG07791 one-of-top-five-correct: 0.390265142058001 CThresh: 3.018797 92 best_is: cluster09 VNG07791 cluster00 -> 1qstA0 6.4063814 160 / 60 conP: 0.142 CATH-ID: 3.40.630.30 Tgcn5 histone acetyl transferase. Chain: a. Engineered: yes. Biologica VNG07791 cluster01 -> 1tplA1 6.5348076 181 / 60 conP: 0.119 CATH-ID: 3.30.70.160 Tyrosine phenol-lyase VNG07791 cluster02 -> 1qstA0 7.9327614 160 / 60 conP: 0.205 CATH-ID: 3.40.630.30 Tgcn5 histone acetyl transferase. Chain: a. Engineered: yes. Biologica VNG07791 cluster03 -> 1alo04 5.8729035 157 / 60 conP: 0.128 CATH-ID: 3.30.365.10 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG07791 cluster04 -> 1fmtA1 7.4173465 202 / 60 conP: 0.120 CATH-ID: 3.40.50.170 Methionyl-tRNA fmet formyltransferase. Chain: a, b. Synonym: 10-formyl VNG07791 cluster09 -> 1bob02 8.0792506 124 / 60 conP: 0.290 CATH-ID: 3.40.630.30 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes --end-- VNG07793 one-of-top-five-correct: 0.182797333164245 CThresh: 6.998657 40 best_is: cluster13 VNG07793 cluster00 -> 1ahjB1 4.2626235 110 / 69 conP: 0.076 CATH-ID: 1.10.472.20 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het VNG07793 cluster01 -> 1fm2A0 3.8395282 151 / 69 conP: 0.046 CATH-ID: 1.10.439.10 Glutaryl 7-aminocephalosporanic acid acylase. Chain: a. Fragment: alph VNG07793 cluster02 -> 1bu2A1 3.4164328 112 / 69 conP: 0.059 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG07793 cluster03 -> 1ha7A 5.3203619 162 / 69 conP: 0.061 NO-CATH VNG07793 cluster04 -> 2scpA0 4.9158397 174 / 69 conP: 0.049 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein VNG07793 cluster13 -> 1dtyA1 6.8011957 159 / 69 conP: 0.094 CATH-ID: 3.30.70.160 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. Chain: a, --end-- VNG0780h one-of-top-five-correct: 0.416853918319 CThresh: 3.054171 75 best_is: cluster00 VNG0780h cluster00 -> 1mml02 8.4660938 146 / 57 conP: 0.239 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes VNG0780h cluster01 -> 2scpA0 5.5533908 174 / 57 conP: 0.088 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein VNG0780h cluster02 -> 1f0kA2 5.3293367 176 / 57 conP: 0.081 CATH-ID: 3.40.50.2000 Udp-n-acetylglucosamine-n-acetylmuramyl- (pentapeptide) pyrophosphoryl VNG0780h cluster03 -> 1sknP0 4.2129066 74 / 57 conP: 0.182 CATH-ID: 1.10.880.10 Transcription factor skn-1. Chain: p. Fragment: binding domain. Engine VNG0780h cluster04 -> 1ngr00 4.6284104 85 / 57 conP: 0.180 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d --end-- VNG0788h one-of-top-five-correct: 0.315763910273228 CThresh: 3.066902 75 best_is: cluster00 VNG0788h cluster00 -> 1skf00 7.3877451 262 / 52 conP: 0.038 CATH-ID: 3.40.710.10 D-alanyl-d-alanine transpeptidase. Chain: null. Ec: 3.4.16.4 VNG0788h cluster01 -> 1epaA0 6.4665934 160 / 52 conP: 0.106 CATH-ID: 2.40.128.20 Epididymal retinoic acid-binding protein (androgen dependent secretory VNG0788h cluster02 -> 1d4tA0 6.4665934 104 / 52 conP: 0.201 CATH-ID: 3.30.505.10 T cell signal transduction molecule sap. Chain: a. Fragment: sh2 domai VNG0788h cluster03 -> 1kit01 6.0060175 177 / 52 conP: 0.076 CATH-ID: 2.60.120.200 Sialidase. Chain: null. Synonym: neuraminidase. Engineered: yes VNG0788h cluster04 -> 1f8dA0 6.6968813 385 / 52 conP: 0.006 CATH-ID: 2.120.10.10 Neuraminidase. Chain: a. Fragment: integral membrane protein, membrane --end-- VNG07900 one-of-top-five-correct: 0.296263176720148 CThresh: 3.923428 75 best_is: cluster16 VNG07900 cluster00 -> 1bwzA2 4.4477581 137 / 63 conP: 0.100 CATH-ID: 3.10.310.10 Diaminopimelate epimerase. Chain: a. Synonym: dap epimerase. Engineere VNG07900 cluster01 -> 1ptvA0 5.7523041 297 / 63 conP: 0.027 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase 1b. Chain: a. Engineered: yes. Mutation: VNG07900 cluster02 -> 1bmqA0 5.3174554 167 / 63 conP: 0.092 CATH-ID: 3.40.50.1460 Interleukin-1 beta convertase. Chain: a. Synonym: ice, il-1beta conver VNG07900 cluster03 -> 1g4wR0 5.3174554 341 / 63 conP: 0.015 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase sptp. Chain: r. Fragment: sptp residues 1 VNG07900 cluster04 -> 1e39A3 4.7790654 320 / 63 conP: 0.016 CATH-ID: 3.50.50.60 Flavocytochrome c3. Chain: a. Engineered: yes. Mutation: yes VNG07900 cluster16 -> 1om2A0 7.2742744 95 / 63 conP: 0.285 CATH-ID: 1.20.960.10 Mitochondrial import receptor subunit tom20. Chain: a. Fragment: resid --end-- VNG08041 one-of-top-five-correct: 0.485486930054342 CThresh: 4.746231 75 best_is: cluster16 VNG08041 cluster00 -> 1e7aA2 6.3268870 90 / 98 conP: 0.326 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG08041 cluster01 -> 1vin02 7.1755989 113 / 98 conP: 0.344 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG08041 cluster02 -> 1qtnB 6.8041187 90 / 98 conP: 0.357 NO-CATH VNG08041 cluster03 -> 4crxA2 7.9908035 111 / 98 conP: 0.402 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG08041 cluster04 -> 1qqnA4 6.8689594 84 / 98 conP: 0.371 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG08041 cluster16 -> 1vin02 9.0599126 113 / 98 conP: 0.474 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG08042 one-of-top-five-correct: 0.55462126618553 CThresh: 3.645893 75 best_is: cluster05 VNG08042 cluster00 -> 1dqaA3 9.0205708 117 / 85 conP: 0.472 CATH-ID: 3.30.70.420 Hmg-coa reductase. Chain: a, b, c, d. Fragment: catalytic portion. Eng VNG08042 cluster01 -> 1qd1B1 9.2191779 180 / 85 conP: 0.360 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG08042 cluster02 -> 1aps00 7.9169531 98 / 85 conP: 0.432 CATH-ID: 3.30.70.100 Acylphosphatase (nmr, 5 structures) VNG08042 cluster03 -> 1qd1B1 8.8219637 180 / 85 conP: 0.334 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG08042 cluster04 -> 1aps00 8.5174686 98 / 85 conP: 0.475 CATH-ID: 3.30.70.100 Acylphosphatase (nmr, 5 structures) VNG08042 cluster05 -> 2dnjA0 9.6163922 253 / 85 conP: 0.257 CATH-ID: 3.60.10.10 Deoxyribonuclease i (dnase i) complexed with DNA (5'-d( Gp Cp Gp Ap Tp --end-- VNG0811h one-of-top-five-correct: 0.328067004904878 CThresh: 8.587373 25 best_is: cluster03 VNG0811h cluster00 -> 1eyqA1 5.9581160 53 / 129 conP: 0.243 CATH-ID: 1.10.890.20 Chalcone-flavonone isomerase 1. Chain: a, b. Synonym: chalcone isomera VNG0811h cluster01 -> 1jp6A 5.8175653 152 / 129 conP: 0.153 NO-CATH VNG0811h cluster02 -> 1r2aA0 5.8426196 46 / 129 conP: 0.244 CATH-ID: 1.20.890.10 Camp-dependent protein kinase type ii regulatory subunit. Chain: a, b. VNG0811h cluster03 -> 1flp00 8.2923250 142 / 129 conP: 0.280 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG0811h cluster04 -> 1brwA2 6.7339826 272 / 129 conP: 0.109 CATH-ID: 3.40.1030.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 --end-- VNG08160 one-of-top-five-correct: 0.0193369121878881 CThresh: 6.361206 75 best_is: --end-- VNG08161 one-of-top-five-correct: 0.0231926920938354 CThresh: 5.239882 75 best_is: --end-- VNG08180 one-of-top-five-correct: 0.160572416289633 CThresh: 6.592642 75 best_is: cluster01 VNG08180 cluster00 -> 1ctt01 4.4552401 151 / 77 conP: 0.072 CATH-ID: 3.40.140.10 Cytidine deaminase (cda) complexed with 3,4-dihydrozebularine (dhz) VNG08180 cluster01 -> 1bjwA2 6.0065648 218 / 77 conP: 0.062 CATH-ID: 3.40.640.10 Aspartate aminotransferase. Chain: a, b. Engineered: yes. Biological_u VNG08180 cluster02 -> 1dar01 5.6084551 258 / 77 conP: 0.039 CATH-ID: 3.40.50.300 Elongation factor g. Chain: null. Synonym: ef-g VNG08180 cluster03 -> 1krs00 4.0806083 110 / 77 conP: 0.092 CATH-ID: 2.40.50.10 Lysyl-tRNA synthetase (product of lyss gene). Chain: null. Domain: ant VNG08180 cluster04 -> 1ej4A0 5.3172600 179 / 77 conP: 0.071 CATH-ID: 3.30.760.10 Eukaryotic initiation factor 4e. Chain: a. Fragment: residues 28-217. --end-- VNG08181 one-of-top-five-correct: 0.593950064081739 CThresh: 4.692874 75 best_is: cluster15 VNG08181 cluster00 -> 1obpA0 6.9106043 158 / 83 conP: 0.208 CATH-ID: 2.40.128.20 Odorant-binding protein. Chain: a, b. Synonym: obp VNG08181 cluster01 -> 1dim00 8.5029215 381 / 83 conP: 0.059 CATH-ID: 2.120.10.10 Sialidase. Chain: null. Engineered: yes VNG08181 cluster02 -> 1i4fA 8.7029691 275 / 83 conP: 0.141 NO-CATH VNG08181 cluster03 -> 1jv4A 7.0068057 157 / 83 conP: 0.214 NO-CATH VNG08181 cluster04 -> 1mup00 8.2873420 157 / 83 conP: 0.282 CATH-ID: 2.40.128.20 Major urinary protein complex with 2-(sec-butyl) thiazoline VNG08181 cluster15 -> 1bj700 10.577384 150 / 83 conP: 0.446 CATH-ID: 2.40.128.20 D 2. Chain: null. Synonym: dander major allergen bda20, dermal allerge --end-- VNG08190 one-of-top-five-correct: 0.200524858459502 CThresh: 6.951401 49 best_is: cluster18 VNG08190 cluster00 -> 1dynA0 3.4319944 113 / 77 conP: 0.070 CATH-ID: 2.30.29.30 Dynamin (pleckstrin homology domain) (dynph) VNG08190 cluster01 -> 4crxA2 4.0459419 111 / 77 conP: 0.084 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG08190 cluster02 -> 1h7zA0 3.6366436 191 / 77 conP: 0.038 CATH-ID: 2.60.90.10 Adenovirus fibre protein. Chain: a, b, c. Fragment: head domain residu VNG08190 cluster03 -> 1bk6A0 5.2738367 422 / 77 conP: 0.008 CATH-ID: 1.25.30.10 Karyopherin alpha. Chain: a, b. Fragment: armadillo domain. Synonym: i VNG08190 cluster04 -> 1aquA0 3.6366436 281 / 77 conP: 0.017 CATH-ID: 3.40.50.300 Estrogen sulfotransferase. Chain: a, b. Synonym: est. Engineered: yes. VNG08190 cluster18 -> 1gqtA 6.9110299 305 / 77 conP: 0.035 NO-CATH --end-- VNG08191 one-of-top-five-correct: 0.337751292480581 CThresh: 6.994986 32 best_is: cluster03 VNG08191 cluster00 -> 1jjcB 6.5593817 785 / 94 conP: 0.002 NO-CATH VNG08191 cluster01 -> 1avgI0 6.8835039 142 / 94 conP: 0.180 CATH-ID: 2.40.128.20 Thrombin. Chain: l, h. Other_details: thE C-terminal segment of the l- VNG08191 cluster02 -> 1obpA0 6.1741369 158 / 94 conP: 0.137 CATH-ID: 2.40.128.20 Odorant-binding protein. Chain: a, b. Synonym: obp VNG08191 cluster03 -> 1bj700 8.4865082 150 / 94 conP: 0.247 CATH-ID: 2.40.128.20 D 2. Chain: null. Synonym: dander major allergen bda20, dermal allerge VNG08191 cluster04 -> 1avgI0 6.6951796 142 / 94 conP: 0.172 CATH-ID: 2.40.128.20 Thrombin. Chain: l, h. Other_details: thE C-terminal segment of the l- --end-- VNG08232 one-of-top-five-correct: 0.430175722442826 CThresh: 4.812572 75 best_is: cluster05 VNG08232 cluster00 -> 1otgA0 7.1156790 125 / 77 conP: 0.240 CATH-ID: 3.30.457.20 5-carboxymethyl-2-hydroxymuconate isomerase. Chain: a, b, c. Engineere VNG08232 cluster01 -> 1sesA2 8.1389247 318 / 77 conP: 0.068 CATH-ID: 3.40.690.10 Seryl-tRNA synthetase (serine-tRNA ligase) complexed with seryl-hydrox VNG08232 cluster02 -> 1cwn_ 6.2970824 324 / 77 conP: 0.039 NO-CATH VNG08232 cluster03 -> 1de4C1 7.5249773 307 / 77 conP: 0.064 CATH-ID: 3.40.630.10 Hemochromatosis protein. Chain: a, d, g. Fragment: ectodomain. Synonym VNG08232 cluster04 -> 1pkp01 5.2933069 70 / 77 conP: 0.235 CATH-ID: 3.30.160.30 Ribosomal protein s5 (prokaryotic) VNG08232 cluster05 -> 1fruA1 8.9575213 177 / 77 conP: 0.251 CATH-ID: 3.30.500.10 Fc (igg) receptor (neonatal) (orthorhombic crystal form) (fcrn) (extra --end-- VNG08260 one-of-top-five-correct: 0.261391726831656 CThresh: 6.390255 75 best_is: cluster06 VNG08260 cluster00 -> 3pte00 7.2146660 347 / 77 conP: 0.029 CATH-ID: 3.40.710.10 D-alanyl-d-alanine carboxypeptidase/transpeptidase VNG08260 cluster01 -> 1ddzA1 6.2709528 227 / 77 conP: 0.064 CATH-ID: 3.40.1050.10 Carbonic anhydrase. Chain: a, b. Engineered: yes VNG08260 cluster02 -> 1h6lA0 6.4034974 353 / 77 conP: 0.022 CATH-ID: 2.120.10.20 Phytase. Chain: a VNG08260 cluster03 -> 1pda03 7.0918284 87 / 77 conP: 0.237 CATH-ID: 3.30.160.40 Porphobilinogen deaminase VNG08260 cluster04 -> 1kobA2 7.3203282 243 / 77 conP: 0.074 CATH-ID: 1.10.510.10 Twitchin. Chain: a, b. Fragment: kinase fragment. Engineered: yes VNG08260 cluster06 -> 1evyA 7.5990038 346 / 77 conP: 0.033 NO-CATH --end-- VNG08261 one-of-top-five-correct: 0.351006052767712 CThresh: 6.982731 59 best_is: cluster11 VNG08261 cluster00 -> 1au1A0 6.3088651 166 / 127 conP: 0.212 CATH-ID: 1.20.120.210 Interferon-beta. Chain: a, b. Engineered: yes VNG08261 cluster01 -> 1ku3A 6.2709434 61 / 127 conP: 0.322 NO-CATH VNG08261 cluster02 -> 1mnmA 6.2400712 85 / 127 conP: 0.292 NO-CATH VNG08261 cluster03 -> 3crd00 5.5456370 100 / 127 conP: 0.237 CATH-ID: 1.10.533.10 Raidd. Chain: null. Fragment: card domain. Engineered: yes VNG08261 cluster04 -> 1ku3A 5.6123159 61 / 127 conP: 0.282 NO-CATH VNG08261 cluster11 -> 1cd1A1 7.8902535 178 / 127 conP: 0.284 CATH-ID: 3.30.500.10 Cd1. Chain: a, b, c, d. Fragment: alpha1, alpha2, alpha3, beta2-microg --end-- VNG0828h one-of-top-five-correct: 0.516784952812023 CThresh: 4.460898 75 best_is: cluster08 VNG0828h cluster00 -> 1vin01 8.3017962 139 / 78 conP: 0.303 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG0828h cluster01 -> 1ahjB1 8.9133495 110 / 78 conP: 0.402 CATH-ID: 1.10.472.20 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het VNG0828h cluster02 -> 1bu2A1 6.2632853 112 / 78 conP: 0.235 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0828h cluster03 -> 1serA1 6.4160811 53 / 78 conP: 0.353 CATH-ID: 1.20.15.10 Seryl-tRNA synthetase complexed with tRNA-ser 2 (gga anticodon) VNG0828h cluster04 -> 1jkw02 6.5448042 101 / 78 conP: 0.269 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG0828h cluster08 -> 1vin02 9.7287539 113 / 78 conP: 0.453 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG08311 one-of-top-five-correct: 0.0240010224009588 CThresh: 5.731012 75 best_is: --end-- VNG08340 one-of-top-five-correct: 0.262195223747547 CThresh: 5.893155 75 best_is: cluster08 VNG08340 cluster00 -> 1bvp11 5.4936097 120 / 89 conP: 0.169 CATH-ID: 1.10.250.10 Bluetongue virus 10 (usa) vp7 (btv-10 (usa) vp7) VNG08340 cluster01 -> 1mhlC0 5.7292526 466 / 89 conP: 0.014 CATH-ID: 1.10.640.10 Myeloperoxidase. Chain: a, c, b, d. Other_details: isoform c VNG08340 cluster02 -> 1gkxA 4.7499933 308 / 89 conP: 0.036 NO-CATH VNG08340 cluster03 -> 1vnc01 4.9458452 176 / 89 conP: 0.101 CATH-ID: 1.20.144.10 Vanadium-containing chloroperoxidase. Chain: null. Ec: 1.11.1.10 VNG08340 cluster04 -> 1khuA 5.7292526 198 / 89 conP: 0.106 NO-CATH VNG08340 cluster08 -> 2gsaA1 7.1117008 178 / 89 conP: 0.171 CATH-ID: 3.30.70.160 Glutamate semialdehyde aminotransferase. Chain: a, b. Synonym: glutama --end-- VNG0836h one-of-top-five-correct: 0.251568414701848 CThresh: 8.270384 25 best_is: cluster03 VNG0836h cluster00 -> 1ala01 6.8541389 73 / 125 conP: 0.278 CATH-ID: 1.10.220.10 Annexin v VNG0836h cluster01 -> 1ala01 6.4381822 73 / 125 conP: 0.255 CATH-ID: 1.10.220.10 Annexin v VNG0836h cluster02 -> 1af800 5.4012240 86 / 125 conP: 0.191 CATH-ID: 1.10.1200.10 Actinorhodin polyketide synthase acyl carrier protein. Chain: null. Sy VNG0836h cluster03 -> 1pprM1 7.2176511 155 / 125 conP: 0.213 CATH-ID: 1.40.10.10 Peridinin-chlorophyll protein. Chain: m, n, o. Synonym: pcp VNG0836h cluster04 -> 1qsaA2 6.3401063 70 / 125 conP: 0.252 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein --end-- VNG0837h one-of-top-five-correct: 0.426078324067288 CThresh: 5.949506 75 best_is: cluster01 VNG0837h cluster00 -> 1msk02 6.9829269 88 / 95 conP: 0.302 CATH-ID: 1.10.288.10 Cobalamin-dependent methionine synthase. Chain: null. Fragment: activa VNG0837h cluster01 -> 1cf7A0 9.0174511 67 / 95 conP: 0.476 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG0837h cluster02 -> 1brwA3 7.7678901 67 / 95 conP: 0.388 CATH-ID: 1.20.970.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 VNG0837h cluster03 -> 1bia01 7.5290686 64 / 95 conP: 0.377 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG0837h cluster04 -> 1bia01 8.3851769 64 / 95 conP: 0.436 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG08451 one-of-top-five-correct: 0.472301132122509 CThresh: 5.977498 75 best_is: cluster14 VNG08451 cluster00 -> 1ihgA 7.3569379 364 / 101 conP: 0.071 NO-CATH VNG08451 cluster01 -> 1repC2 7.8743821 91 / 101 conP: 0.371 CATH-ID: 1.10.10.10 DNA (5'- d( Cp Cp Tp Gp Tp Gp Ap Cp Ap Ap Ap Tp Tp Gp Cp Cp Cp Tp Cp A VNG08451 cluster02 -> 1fjgO0 6.8474450 88 / 101 conP: 0.309 CATH-TRUNC VNG08451 cluster03 -> 1jqcA0 6.6686362 340 / 101 conP: 0.069 CATH-ID: 1.10.620.20 Protein r2 of ribonucleotide reductase. Chain: a, b. Synonym: ribonucl VNG08451 cluster04 -> 1ba500 5.7291335 53 / 101 conP: 0.293 CATH-ID: 1.10.10.60 Htrf1. Chain: null. Fragment: DNA-binding domain. Synonym: telomeric r VNG08451 cluster14 -> 1jud02 9.4053399 75 / 101 conP: 0.506 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG08511 one-of-top-five-correct: 0.295087039562946 CThresh: 6.311597 75 best_is: cluster12 VNG08511 cluster00 -> 1vin01 6.3061950 139 / 80 conP: 0.144 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG08511 cluster01 -> 1l1tA 5.7927602 259 / 80 conP: 0.048 NO-CATH VNG08511 cluster02 -> 1dguA0 4.8521374 183 / 80 conP: 0.070 CATH-ID: 1.10.238.10 Calcium-saturated cib. Chain: a VNG08511 cluster03 -> 1b7eA2 5.6160581 126 / 80 conP: 0.134 CATH-ID: 1.10.740.10 Transposase inhibitor protein from tn5. Chain: a. Engineered: yes VNG08511 cluster04 -> 1c07A0 7.1735240 95 / 80 conP: 0.241 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm VNG08511 cluster12 -> 1bi2B1 7.9547763 73 / 80 conP: 0.325 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye --end-- VNG08520 one-of-top-five-correct: 0.240486364070253 CThresh: 6.623753 75 best_is: cluster01 VNG08520 cluster00 -> 1lbu02 5.9535469 129 / 88 conP: 0.153 CATH-ID: 3.30.70.540 Muramoyl-pentapeptide carboxypeptidase. Chain: null. Ec: 3.4.17.8 VNG08520 cluster01 -> 1cg2A2 7.1498220 110 / 88 conP: 0.229 CATH-ID: 3.30.70.360 Carboxypeptidase g2. Chain: a, b, c, d. Engineered: yes. Biological_un VNG08520 cluster02 -> 1fruA1 6.1500725 177 / 88 conP: 0.115 CATH-ID: 3.30.500.10 Fc (igg) receptor (neonatal) (orthorhombic crystal form) (fcrn) (extra VNG08520 cluster03 -> 1egaA2 6.7674466 106 / 88 conP: 0.215 CATH-ID: 3.30.300.20 Gtp-binding protein era. Chain: a, b. Biological_unit: unknown VNG08520 cluster04 -> 1tfi00 5.4064474 50 / 88 conP: 0.224 CATH-ID: 2.20.30.20 Transcriptional elongation factor sii (tfiis, nucleic-acid binding dom --end-- VNG08521 one-of-top-five-correct: 0.398837824922297 CThresh: 5.844157 75 best_is: cluster17 VNG08521 cluster00 -> 1rkd02 5.8929132 256 / 113 conP: 0.125 CATH-ID: 3.90.77.20 Ribokinase. Chain: null. Engineered: yes. Biological_unit: homodimer VNG08521 cluster01 -> 1tfe02 5.1757254 45 / 113 conP: 0.301 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG08521 cluster02 -> 1bf6A0 6.2432243 291 / 113 conP: 0.113 CATH-ID: 3.20.20.140 Phosphotriesterase homology protein. Chain: a, b. Engineered: yes VNG08521 cluster03 -> 1qe0A2 5.3691143 91 / 113 conP: 0.255 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b. Engineered: yes VNG08521 cluster04 -> 1ku3A 5.6123159 61 / 113 conP: 0.307 NO-CATH VNG08521 cluster17 -> 1ej0A0 8.2519953 180 / 113 conP: 0.312 CATH-ID: 3.40.50.150 Ftsj. Chain: a. Synonym: ftsj methyltransferase. Engineered: yes --end-- VNG0853c one-of-top-five-correct: 0.545420700712265 CThresh: 6.388383 75 best_is: cluster16 VNG0853c cluster00 -> 1b91A0 7.9770709 118 / 131 conP: 0.405 CATH-ID: 1.20.920.10 Histone acetyltransferase. Chain: a. Fragment: bromodomain. Engineered VNG0853c cluster01 -> 1be3H0 6.5793224 64 / 131 conP: 0.377 CATH-ID: 1.10.287.20 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG0853c cluster02 -> 1b91A0 7.8587732 118 / 131 conP: 0.396 CATH-ID: 1.20.920.10 Histone acetyltransferase. Chain: a. Fragment: bromodomain. Engineered VNG0853c cluster03 -> 1e52A0 5.3705710 56 / 131 conP: 0.309 CATH-ID: 4.10.860.10 Excinuclease abc subunit . Chain: a, b. Fragment: c-terminal domain re VNG0853c cluster04 -> 1cf7B0 7.9090100 82 / 131 conP: 0.447 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG0853c cluster16 -> 1aep00 9.7109317 153 / 131 conP: 0.482 CATH-ID: 1.20.120.20 Apolipophorin iii --end-- VNG0857c one-of-top-five-correct: 0.255046378638019 CThresh: 5.383352 75 best_is: cluster12 VNG0857c cluster00 -> 1e7aA3 6.3001248 92 / 88 conP: 0.262 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG0857c cluster01 -> 1abz00 5.0616836 38 / 88 conP: 0.276 CATH-ID: 1.20.860.10 Alpha-t-alpha. Chain: null. Synonym: ata. Engineered: yes. Other_detai VNG0857c cluster02 -> 1df4A0 6.2255530 57 / 88 conP: 0.314 CATH-ID: 1.20.15.180 HIV-1 envelope glycoprotein gp41. Chain: a. Fragment: residues 1 - 34 VNG0857c cluster03 -> 2a3dA0 6.1288549 73 / 88 conP: 0.282 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG0857c cluster04 -> 1f4qA0 5.1674443 161 / 88 conP: 0.129 CATH-ID: 1.10.238.10 Grancalcin. Chain: a, b. Engineered: yes VNG0857c cluster12 -> 1bby00 6.8011957 69 / 88 conP: 0.330 CATH-ID: 1.10.10.10 Rap30. Chain: null. Fragment: DNA-binding domain. Synonym: transcripti --end-- VNG0861h one-of-top-five-correct: 0.415508019162279 CThresh: 6.985470 47 best_is: cluster03 VNG0861h cluster00 -> 1pdnC1 6.8180843 68 / 98 conP: 0.282 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b VNG0861h cluster01 -> 1ipiA 5.7304974 114 / 98 conP: 0.171 NO-CATH VNG0861h cluster02 -> 1efvB0 7.2081034 252 / 98 conP: 0.106 CATH-ID: 3.40.50.1120 Electron transfer flavoprotein. Chain: a, b. Synonym: etf, hetf, elect VNG0861h cluster03 -> 1bqcA0 9.3002285 302 / 98 conP: 0.131 CATH-ID: 3.20.20.80 Beta-mannanase. Chain: a. Ec: 3.2.1.78 VNG0861h cluster04 -> 1gpb01 6.4473307 491 / 98 conP: 0.017 CATH-ID: 3.90.270.10 Glycogen phosphorylase b (t state) --end-- VNG0863h one-of-top-five-correct: 0.265268006805671 CThresh: 1.516403 100 best_is: cluster18 VNG0863h cluster00 -> 1a5t02 5.0231178 40 / 44 conP: 0.324 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG0863h cluster01 -> 1bg602 5.9527819 146 / 44 conP: 0.104 CATH-ID: 1.10.1040.10 N-(1-d-carboxylethyl)-l-norvaline dehydrogenase. Chain: null. Engineer VNG0863h cluster02 -> 1a1700 5.7107765 159 / 44 conP: 0.081 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein VNG0863h cluster03 -> 5eas01 5.4687711 160 / 44 conP: 0.075 CATH-ID: 1.50.30.10 5-epi-aristolochene synthase. Chain: null. Synonym: 5-epi-aristolochen VNG0863h cluster04 -> 1a9xA4 5.9527819 150 / 44 conP: 0.098 CATH-ID: 1.10.1030.10 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG0863h cluster18 -> 1af800 6.1947873 86 / 44 conP: 0.244 CATH-ID: 1.10.1200.10 Actinorhodin polyketide synthase acyl carrier protein. Chain: null. Sy --end-- VNG08650 one-of-top-five-correct: 0.297039396349794 CThresh: 3.318847 75 best_is: cluster16 VNG08650 cluster00 -> 1l6wA 7.3290605 220 / 49 conP: 0.050 NO-CATH VNG08650 cluster01 -> 1a2oA1 5.4538549 133 / 49 conP: 0.096 CATH-ID: 3.40.50.3000 Cheb methylesterase. Chain: a, b. Engineered: yes. Biological_unit: mo VNG08650 cluster02 -> 1b4fA0 5.4538549 74 / 49 conP: 0.197 CATH-ID: 1.10.150.50 Ephb2. Chain: a, b, c, d, e, f, g, h. Fragment: sam domain. Engineered VNG08650 cluster03 -> 1hy1A3 4.5162522 72 / 49 conP: 0.162 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a VNG08650 cluster04 -> 1a7602 4.6168959 60 / 49 conP: 0.191 CATH-ID: 1.10.150.20 Flap endonuclease-1 protein. Chain: null VNG08650 cluster16 -> 1ak500 7.3290605 329 / 49 conP: 0.011 CATH-ID: 3.20.20.90 Inosine-5'-monophosphate dehydrogenase. Chain: null. Synonym: impdh. E --end-- VNG08651 one-of-top-five-correct: 0.346562388023422 CThresh: 6.331953 75 best_is: cluster05 VNG08651 cluster00 -> 1erv00 6.4244974 105 / 94 conP: 0.227 CATH-ID: 3.40.30.10 Thioredoxin. Chain: null. Engineered: yes. Mutation: c73s. Other_detai VNG08651 cluster01 -> 1nsf01 5.4036472 180 / 94 conP: 0.111 CATH-ID: 3.40.50.300 N-ethylmaleimide sensitive factor. Chain: null. Fragment: d2 hexameriz VNG08651 cluster02 -> 1cex00 5.7888920 197 / 94 conP: 0.110 CATH-ID: 3.40.50.950 Cutinase. Chain: null. Engineered: yes VNG08651 cluster03 -> 1cfyA0 5.2628095 133 / 94 conP: 0.146 CATH-ID: 3.40.20.10 Cofilin. Chain: a, b. Engineered: yes VNG08651 cluster04 -> 1a0dA0 7.7151163 437 / 94 conP: 0.035 CATH-ID: 3.20.20.150 Xylose isomerase. Chain: a, b, c, d. Synonym: glucose isomerase. Biolo VNG08651 cluster05 -> 1i60A 8.2929836 272 / 94 conP: 0.127 NO-CATH --end-- VNG0875c one-of-top-five-correct: 0.249663663713779 CThresh: 8.406480 25 best_is: cluster07 VNG0875c cluster00 -> 1qgpA0 5.9364206 76 / 115 conP: 0.202 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d VNG0875c cluster01 -> 1ns1A0 7.0621172 73 / 115 conP: 0.263 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re VNG0875c cluster02 -> 1fjgB2 4.9191921 62 / 115 conP: 0.171 CATH-TRUNC VNG0875c cluster03 -> 1fgjA2 5.4868887 230 / 115 conP: 0.080 CATH-ID: 1.20.850.10 Hydroxylamine oxidoreductase. Chain: a, b. Ec: 1.7.3.4 VNG0875c cluster04 -> 1a3qA2 5.9527819 44 / 115 conP: 0.236 CATH-ID: 1.10.15.20 Nuclear factor-kappa-b p52. Chain: a, b. Fragment: rel homology region VNG0875c cluster07 -> 1dlc01 7.4793115 229 / 115 conP: 0.135 CATH-ID: 1.20.190.10 Delta-endotoxin cryiiia (bt13) --end-- VNG0879c one-of-top-five-correct: 0.657064763938047 CThresh: 7.259591 25 best_is: cluster05 VNG0879c cluster00 -> 1egzA0 10.753372 291 / 120 conP: 0.284 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: VNG0879c cluster01 -> 1qtwA0 6.8018458 285 / 120 conP: 0.116 CATH-ID: 3.20.20.150 Endonuclease iv. Chain: a. Engineered: yes VNG0879c cluster02 -> 2dnjA0 6.8166899 253 / 120 conP: 0.137 CATH-ID: 3.60.10.10 Deoxyribonuclease i (dnase i) complexed with DNA (5'-d( Gp Cp Gp Ap Tp VNG0879c cluster03 -> 1ad4B0 10.571208 248 / 120 conP: 0.326 CATH-ID: 3.20.20.20 Dihydropteroate synthetase. Chain: a, b. Synonym: dhps. Ec: 2.5.1.15 VNG0879c cluster04 -> 2a3dA0 7.4780739 73 / 120 conP: 0.355 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG0879c cluster05 -> 1cz1A0 11.637840 394 / 120 conP: 0.219 CATH-ID: 3.20.20.80 Exo-b-(1,3)-glucanase. Chain: a. Engineered: yes --end-- VNG08820 one-of-top-five-correct: 0.385602229256881 CThresh: 3.910106 75 best_is: cluster08 VNG08820 cluster00 -> 1e7aA5 7.2742744 112 / 63 conP: 0.249 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG08820 cluster01 -> 1bu2A1 7.9265474 112 / 63 conP: 0.285 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG08820 cluster02 -> 1bu2A1 7.0916476 112 / 63 conP: 0.239 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG08820 cluster03 -> 1ptvA0 5.1000311 297 / 63 conP: 0.022 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase 1b. Chain: a. Engineered: yes. Mutation: VNG08820 cluster04 -> 1ahuA1 5.9697284 123 / 63 conP: 0.167 CATH-ID: 3.30.373.10 Vanillyl-alcohol oxidase. Chain: a, b. Biological_unit: octamer. Other VNG08820 cluster08 -> 1jkw01 8.3613961 176 / 63 conP: 0.182 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y --end-- VNG08851 one-of-top-five-correct: 0.0353092972609798 CThresh: 2.627391 100 best_is: --end-- VNG08853 one-of-top-five-correct: 0.027058904243574 CThresh: 4.285260 75 best_is: --end-- VNG08891 one-of-top-five-correct: 0.335655461430869 CThresh: 2.520051 100 best_is: cluster10 VNG08891 cluster00 -> 1dfx00 3.8190326 125 / 52 conP: 0.091 CATH-ID: 2.60.40.730 Desulfoferrodoxin. Chain: null. Biological_unit: probably active as a VNG08891 cluster01 -> 1aw8B0 4.8545778 90 / 52 conP: 0.178 CATH-ID: 2.40.40.20 L-aspartate-alpha-decarboxylase. Chain: a, b, d, e. Engineered: yes. B VNG08891 cluster02 -> 1dq3A4 6.0060175 114 / 52 conP: 0.179 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG08891 cluster03 -> 1bdyA0 6.4665934 123 / 52 conP: 0.181 CATH-ID: 2.60.40.150 Protein kinasE C. Chain: a, b. Fragment: c2-domain. Synonym: pkc. Engi VNG08891 cluster04 -> 1c9fA0 3.9334261 87 / 52 conP: 0.147 CATH-ID: 3.10.20.140 Caspase-activated dnase. Chain: a. Fragment: n-terminal domain, residu VNG08891 cluster10 -> 1cs6A2 7.3877451 89 / 52 conP: 0.313 CATH-ID: 2.60.40.10 Axonin-1. Chain: a. Fragment: ig1-4. Engineered: yes --end-- VNG08892 one-of-top-five-correct: 0.245813951660187 CThresh: 3.073759 75 best_is: cluster05 VNG08892 cluster00 -> 1bw300 5.9581160 125 / 53 conP: 0.145 CATH-ID: 2.40.40.10 Barwin, basic barley seed protein (nmr, 20 structures) VNG08892 cluster01 -> 1ao3A0 4.5842208 187 / 53 conP: 0.048 CATH-ID: 3.40.50.410 Von willebrand factor. Chain: a, b. Fragment: a3 domain. Engineered: s VNG08892 cluster02 -> 1aw8B0 6.0451230 90 / 53 conP: 0.217 CATH-ID: 2.40.40.20 L-aspartate-alpha-decarboxylase. Chain: a, b, d, e. Engineered: yes. B VNG08892 cluster03 -> 1kh0A 6.2710659 65 / 53 conP: 0.291 NO-CATH VNG08892 cluster04 -> 1soxA3 6.4160811 123 / 53 conP: 0.166 CATH-ID: 2.60.40.650 Sulfite oxidase. Chain: a, b. Biological_unit: dimer VNG08892 cluster05 -> 1acc04 6.4160811 131 / 53 conP: 0.152 CATH-ID: 2.60.40.810 Anthrax protective antigen. Chain: null. Synonym: pa --end-- VNG08893 one-of-top-five-correct: 0.307177127513188 CThresh: 2.293029 100 best_is: cluster13 VNG08893 cluster00 -> 1dfuP0 6.2363054 94 / 52 conP: 0.243 CATH-ID: 2.40.240.10 Ribosomal protein l25. Chain: p. Engineered: yes. Other_details: prote VNG08893 cluster01 -> 1imt00 5.3151537 80 / 52 conP: 0.229 CATH-ID: 2.10.80.10 Intestinal toxin 1. Chain: null. Synonym: mit1 VNG08893 cluster02 -> 1dfuP0 6.4665934 94 / 52 conP: 0.256 CATH-ID: 2.40.240.10 Ribosomal protein l25. Chain: p. Engineered: yes. Other_details: prote VNG08893 cluster03 -> 1kh0A 4.5999242 65 / 52 conP: 0.228 NO-CATH VNG08893 cluster04 -> 1dfuP0 6.2363054 94 / 52 conP: 0.243 CATH-ID: 2.40.240.10 Ribosomal protein l25. Chain: p. Engineered: yes. Other_details: prote VNG08893 cluster13 -> 1d0nA5 6.9271692 96 / 52 conP: 0.276 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b --end-- VNG08894 one-of-top-five-correct: 0.317199584893905 CThresh: 2.229953 100 best_is: cluster06 VNG08894 cluster00 -> 1tif00 6.6258584 76 / 49 conP: 0.299 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid VNG08894 cluster01 -> 1bob01 5.9226563 128 / 49 conP: 0.142 CATH-ID: 3.90.360.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG08894 cluster02 -> 1buoA0 5.2194542 121 / 49 conP: 0.130 CATH-ID: 3.30.710.10 Promyelocytic leukemia zinc finger protein plzf. Chain: a. Fragment: b VNG08894 cluster03 -> 1dfuP0 5.2194542 94 / 49 conP: 0.181 CATH-ID: 2.40.240.10 Ribosomal protein l25. Chain: p. Engineered: yes. Other_details: prote VNG08894 cluster04 -> 1kb5B0.man 4.7506529 114 / 49 conP: 0.126 NO-CATH VNG08894 cluster06 -> 1tif00 7.0946598 76 / 49 conP: 0.329 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid --end-- VNG08895 one-of-top-five-correct: 0.315391071263497 CThresh: 3.077322 75 best_is: cluster19 VNG08895 cluster00 -> 1pysB6 6.6968813 96 / 52 conP: 0.230 CATH-ID: 3.30.70.380 Phenylalanyl-tRNA synthetase. Chain: a, b. Biological_unit: tetramer o VNG08895 cluster01 -> 1d5rA2 6.6968813 133 / 52 conP: 0.154 CATH-ID: 2.60.40.1110 Phosphoinositide phosphotase pten. Chain: a. Fragment: residues 7-353. VNG08895 cluster02 -> 1jl0A 6.9271692 309 / 52 conP: 0.018 NO-CATH VNG08895 cluster03 -> 1jcxA 6.0060175 255 / 52 conP: 0.028 NO-CATH VNG08895 cluster04 -> 1bwzA2 7.1574571 137 / 52 conP: 0.164 CATH-ID: 3.10.310.10 Diaminopimelate epimerase. Chain: a. Synonym: dap epimerase. Engineere VNG08895 cluster19 -> 1gcuA2 7.3877451 148 / 52 conP: 0.153 CATH-ID: 3.30.360.10 Biliverdin reductase a. Chain: a. Engineered: yes --end-- VNG08896 one-of-top-five-correct: 0.38772325949354 CThresh: 2.869850 100 best_is: cluster17 VNG08896 cluster00 -> 1tif00 6.4967938 76 / 56 conP: 0.300 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid VNG08896 cluster01 -> 1tif00 6.1366280 76 / 56 conP: 0.278 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid VNG08896 cluster02 -> 1k2i1 5.3705710 236 / 56 conP: 0.040 NO-CATH VNG08896 cluster03 -> 1tif00 7.0263004 76 / 56 conP: 0.333 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid VNG08896 cluster04 -> 1gyfA0 5.5616595 62 / 56 conP: 0.280 CATH-ID: 2.30.35.50 Cytoplasmic domain binding protein (cd2bp2). Chain: a. Fragment: cd2-b VNG08896 cluster17 -> 1dfuP0 8.0735058 94 / 56 conP: 0.350 CATH-ID: 2.40.240.10 Ribosomal protein l25. Chain: p. Engineered: yes. Other_details: prote --end-- VNG0892h one-of-top-five-correct: 0.287656582018285 CThresh: 2.999765 100 best_is: cluster13 VNG0892h cluster00 -> 1eo0A0 4.7074607 77 / 50 conP: 0.173 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En VNG0892h cluster01 -> 1ezm01 6.5714252 152 / 50 conP: 0.112 CATH-ID: 3.10.170.10 Elastase (zinc metalloprotease) VNG0892h cluster02 -> 1a0dA0 5.4064474 437 / 50 conP: 0.002 CATH-ID: 3.20.20.150 Xylose isomerase. Chain: a, b, c, d. Synonym: glucose isomerase. Biolo VNG0892h cluster03 -> 1copD0 5.9554724 66 / 50 conP: 0.260 CATH-ID: 3.30.240.10 Cro repressor. Chain: d, e. Engineered: yes VNG0892h cluster04 -> 1amp00 6.8044207 291 / 50 conP: 0.019 CATH-ID: 3.40.630.10 Aminopeptidase (aeromonas proteolytica) VNG0892h cluster13 -> 1bxdA0 7.0374163 161 / 50 conP: 0.112 CATH-ID: 3.30.565.10 Osmolarity sensor protein (envz). Chain: a. Fragment: residues 290-450 --end-- VNG08980 one-of-top-five-correct: 0.49606439027316 CThresh: 3.260601 75 best_is: cluster06 VNG08980 cluster00 -> 1jl5A 6.4904859 353 / 61 conP: 0.018 NO-CATH VNG08980 cluster01 -> 1nf1A2 5.6123159 177 / 61 conP: 0.096 CATH-ID: 1.10.506.10 Neurofibromin. Chain: a. Fragment: gap related domain. Synonym: nf1-33 VNG08980 cluster02 -> 1g4aA0 8.0272833 173 / 61 conP: 0.183 CATH-ID: 3.60.20.10 Atp-dependent hsl protease atp-binding subunit hslu. Chain: e, f. Syno VNG08980 cluster03 -> 1ecbA1 6.0514009 321 / 61 conP: 0.023 CATH-ID: 3.60.20.10 Glutamine phosphoribosylpyrophosphate amidotransferase. Chain: a, b, c VNG08980 cluster04 -> 1ej4A0 6.7100284 179 / 61 conP: 0.125 CATH-ID: 3.30.760.10 Eukaryotic initiation factor 4e. Chain: a. Fragment: residues 28-217. VNG08980 cluster06 -> 1g4aA0 9.3445382 173 / 61 conP: 0.247 CATH-ID: 3.60.20.10 Atp-dependent hsl protease atp-binding subunit hslu. Chain: e, f. Syno --end-- VNG0907h one-of-top-five-correct: 0.327841214789507 CThresh: 1.574736 100 best_is: cluster06 VNG0907h cluster00 -> 1bgxT6 6.0271037 144 / 47 conP: 0.125 CATH-ID: 1.10.473.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG0907h cluster01 -> 1bgxT6 5.5524610 144 / 47 conP: 0.111 CATH-ID: 1.10.473.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG0907h cluster02 -> 1bgxT6 6.0271037 144 / 47 conP: 0.125 CATH-ID: 1.10.473.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG0907h cluster03 -> 1bgxT6 6.7390678 144 / 47 conP: 0.149 CATH-ID: 1.10.473.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG0907h cluster04 -> 1bgvA1 5.7897824 167 / 47 conP: 0.086 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer VNG0907h cluster06 -> 1hy1A3 6.9763891 72 / 47 conP: 0.354 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a --end-- VNG09081 one-of-top-five-correct: 0.465945498610635 CThresh: 6.984128 45 best_is: cluster12 VNG09081 cluster00 -> 1mroA3 7.7431983 227 / 116 conP: 0.193 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG09081 cluster01 -> 1fz1F2 7.9827296 73 / 116 conP: 0.394 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: VNG09081 cluster02 -> 1aisB1 7.4751423 99 / 116 conP: 0.324 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG09081 cluster03 -> 1bu2A1 8.1342766 112 / 116 conP: 0.349 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG09081 cluster04 -> 1a8h01 7.3840625 212 / 116 conP: 0.191 CATH-ID: 1.10.730.10 Methionyl-tRNA synthetase. Chain: null. Synonym: metrs. Biological_uni VNG09081 cluster12 -> 2ng101 9.4504380 89 / 116 conP: 0.474 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp --end-- VNG0911h one-of-top-five-correct: 0.275009960174693 CThresh: 6.769593 75 best_is: cluster05 VNG0911h cluster00 -> 1tfe02 6.1373296 45 / 89 conP: 0.267 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG0911h cluster01 -> 1fgjA2 6.5363721 230 / 89 conP: 0.087 CATH-ID: 1.20.850.10 Hydroxylamine oxidoreductase. Chain: a, b. Ec: 1.7.3.4 VNG0911h cluster02 -> 1vhbA0 6.5126601 135 / 89 conP: 0.166 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a, b. Synonym: soluble cytochrome o. Engineered: ye VNG0911h cluster03 -> 1vin02 5.9223189 113 / 89 conP: 0.167 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG0911h cluster04 -> 1a81A2 6.3777306 45 / 89 conP: 0.280 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG0911h cluster05 -> 1vhbA0 7.6877712 135 / 89 conP: 0.219 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a, b. Synonym: soluble cytochrome o. Engineered: ye --end-- VNG09160 one-of-top-five-correct: 0.423862273487711 CThresh: 6.593540 75 best_is: cluster08 VNG09160 cluster00 -> 1hvxA 6.9563711 483 / 107 conP: 0.032 NO-CATH VNG09160 cluster01 -> 2scuB3 5.7736557 146 / 107 conP: 0.174 CATH-ID: 3.40.50.261 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG09160 cluster02 -> 1ftrA2 6.7000706 149 / 107 conP: 0.213 CATH-ID: 3.30.70.550 Formylmethanofuran\:tetrahydromethanopterin formyltransferase. Chain: VNG09160 cluster03 -> 1yrnA0 6.3914577 49 / 107 conP: 0.322 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG09160 cluster04 -> 1ba500 6.6450636 53 / 107 conP: 0.333 CATH-ID: 1.10.10.60 Htrf1. Chain: null. Fragment: DNA-binding domain. Synonym: telomeric r VNG09160 cluster08 -> 1bpb02 9.0114571 114 / 107 conP: 0.398 CATH-ID: 3.30.460.10 DNA polymerase beta (beta polymerase) (apo, 31kd domain) --end-- VNG09230 one-of-top-five-correct: 0.353291065541439 CThresh: 7.035210 25 best_is: cluster17 VNG09230 cluster00 -> 1qgxA1 6.1197669 219 / 113 conP: 0.128 CATH-ID: 3.30.540.10 3',5'-adenosine bisphosphatase. Chain: a. Synonym: pap phosphatase. En VNG09230 cluster01 -> 1b3qA1 6.2286140 62 / 113 conP: 0.286 CATH-ID: 1.20.15.220 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG09230 cluster02 -> 1sctA0 6.4219567 149 / 113 conP: 0.198 CATH-ID: 1.10.490.10 Hemoglobin. Heterogen: carbon monoxide VNG09230 cluster03 -> 1qaxA1 5.8960055 110 / 113 conP: 0.213 CATH-ID: 3.30.70.420 3-hydroxy-3-methylglutaryl-coenzyme a reductase. Chain: a, b. Engineer VNG09230 cluster04 -> 1crkA2 5.8929132 279 / 113 conP: 0.087 CATH-ID: 3.30.590.10 Creatine kinase. Chain: a, b, c, d. Biological_unit: octamer VNG09230 cluster17 -> 1afrA0 8.2602579 345 / 113 conP: 0.111 CATH-ID: 1.10.620.20 Delta9 stearoyl-acyl carrier protein desaturase. Chain: a, b, c, d, e, --end-- VNG09231 one-of-top-five-correct: 0.400314055004651 CThresh: 3.879971 75 best_is: cluster19 VNG09231 cluster00 -> 1e7aA3 6.8080523 92 / 74 conP: 0.313 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG09231 cluster01 -> 1pmi02 8.0589819 136 / 74 conP: 0.302 CATH-ID: 1.10.441.10 Phosphomannose isomerase. Chain: null. Synonym: pmi. Ec: 5.3.1.8 VNG09231 cluster02 -> 1ihgA 6.8080523 364 / 74 conP: 0.034 NO-CATH VNG09231 cluster03 -> 1qsaA2 6.7990366 70 / 74 conP: 0.359 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG09231 cluster04 -> 1b5tA0 6.1948600 275 / 74 conP: 0.063 CATH-ID: 3.20.20.220 Methylenetetrahydrofolate reductase. Chain: a, b, c. Engineered: yes VNG09231 cluster19 -> 1ljwA 8.2661066 141 / 74 conP: 0.304 NO-CATH --end-- VNG09232 one-of-top-five-correct: 0.0196869646907708 CThresh: 6.803054 75 best_is: --end-- VNG09233 one-of-top-five-correct: 0.331898842397959 CThresh: 4.111512 75 best_is: cluster19 VNG09233 cluster00 -> 1fc3A0 6.9419288 119 / 79 conP: 0.279 CATH-ID: 1.10.10.60 Spo0a. Chain: a, b, c. Fragment: c-terminal domain. Synonym: sporulati VNG09233 cluster01 -> 1d1dA1 6.7406581 140 / 79 conP: 0.233 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG09233 cluster02 -> 1fgs01 6.6361772 212 / 79 conP: 0.135 CATH-ID: 3.40.50.300 Folylpolyglutamate synthetase. Chain: null. Synonym: fpgs. Engineered: VNG09233 cluster03 -> 1qguA2 5.4177814 143 / 79 conP: 0.168 CATH-ID: 3.40.50.10 Nitrogenase molybdenum iron protein. Chain: a, c. Synonym: nitrogenase VNG09233 cluster04 -> 1a5902 7.4394910 108 / 79 conP: 0.330 CATH-ID: 1.10.230.10 Citrate synthase. Chain: null. Engineered: yes. Biological_unit: dimer VNG09233 cluster19 -> 1au1A0 7.4484410 166 / 79 conP: 0.228 CATH-ID: 1.20.120.210 Interferon-beta. Chain: a, b. Engineered: yes --end-- VNG09240 one-of-top-five-correct: 0.160144889920431 CThresh: 6.562912 75 best_is: cluster17 VNG09240 cluster00 -> 3pmgA1 5.7434573 197 / 69 conP: 0.054 CATH-ID: 3.40.460.10 Alpha-d-glucose-1,6-bisphosphate. Chain: a, b. Synonym: phosphoglucomu VNG09240 cluster01 -> 1bq7A0 5.1088143 186 / 69 conP: 0.051 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG09240 cluster02 -> 1cbf02 4.0510758 121 / 69 conP: 0.071 CATH-ID: 3.30.950.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m VNG09240 cluster03 -> 1aml00 3.7042156 40 / 69 conP: 0.135 CATH-ID: 4.10.230.10 Amyloid a4. Chain: null. Domain: residues 1 - 40. Engineered: yes VNG09240 cluster04 -> 1mkp00 5.7434573 144 / 69 conP: 0.089 CATH-ID: 3.90.190.10 Pyst1. Chain: null. Fragment: catalytic domain. Synonym: dual specific VNG09240 cluster17 -> 1b25A2 6.1665527 178 / 69 conP: 0.073 CATH-ID: 1.10.569.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d --end-- VNG09250 one-of-top-five-correct: 0.327895519070322 CThresh: 6.985111 65 best_is: cluster08 VNG09250 cluster00 -> 1bxrA5 6.9903000 258 / 97 conP: 0.094 CATH-ID: 3.30.470.20 Carbamoyl-phosphate synthase. Chain: a, b, c, d, e, f, g, h. Engineere VNG09250 cluster01 -> 1a0p01 5.4230680 91 / 97 conP: 0.180 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG09250 cluster02 -> 1iab00 4.9148345 200 / 97 conP: 0.080 CATH-ID: 3.40.390.10 Astacin with zinc replaced by cobalt(ii) VNG09250 cluster03 -> 1ewpA0 5.4509278 204 / 97 conP: 0.089 CATH-ID: 3.90.70.10 Cruzain. Chain: a. Fragment: catalytic domain. Synonym: cruzipain, cru VNG09250 cluster04 -> 1bip00 4.4984745 122 / 97 conP: 0.119 CATH-ID: 1.10.120.10 Bifunctional trypsin/alpha-amylase inhibitor (rbi) (nmr, 20 structures VNG09250 cluster08 -> 1pkm01 8.2922053 176 / 97 conP: 0.214 CATH-ID: 3.40.50.50 M1 pyruvate kinase. Chain: null. Synonym: pk. Ec: 2.7.1.40 --end-- VNG09251 one-of-top-five-correct: 0.370679082975681 CThresh: 7.929499 25 best_is: cluster10 VNG09251 cluster00 -> 1hp800 7.0542554 68 / 122 conP: 0.305 CATH-ID: 1.10.810.10 Hu-p8. Chain: null. Engineered: synthetic gene. Mutation: n-terminal i VNG09251 cluster01 -> 1eemA2 6.4969148 115 / 122 conP: 0.222 CATH-ID: 1.20.1050.10 Glutathione-s-transferase. Chain: a. Engineered: yes VNG09251 cluster02 -> 1pda03 6.6059185 87 / 122 conP: 0.257 CATH-ID: 3.30.160.40 Porphobilinogen deaminase VNG09251 cluster03 -> 1be3C0 7.0160955 378 / 122 conP: 0.068 CATH-ID: 1.20.810.10 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG09251 cluster04 -> 1ecmA0 7.4257126 91 / 122 conP: 0.300 CATH-ID: 1.20.59.10 Endo-oxabicyclic transition state analogue. Chain: a, b. Domain: chori VNG09251 cluster10 -> 2ng101 8.6670305 89 / 122 conP: 0.383 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp --end-- VNG0926h one-of-top-five-correct: 0.244599679626202 CThresh: 4.811025 75 best_is: cluster10 VNG0926h cluster00 -> 1hzdA 5.9576887 266 / 58 conP: 0.024 NO-CATH VNG0926h cluster01 -> 1qckA0 5.0521218 89 / 58 conP: 0.140 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG0926h cluster02 -> 1fokA1 5.9576887 281 / 58 conP: 0.020 CATH-ID: 3.90.241.10 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG0926h cluster03 -> 1admA2 4.7305715 178 / 58 conP: 0.048 CATH-ID: 3.90.220.10 Adenine-n6-DNA-methyltransferase taqi. Chain: a, b. Ec: 2.1.1.72 VNG0926h cluster04 -> 1kpsB 5.7347991 156 / 58 conP: 0.081 NO-CATH VNG0926h cluster10 -> 1emuA2 7.0721368 85 / 58 conP: 0.234 CATH-ID: 1.10.167.10 Axin. Chain: a. Fragment: rgs-homologous domain. Engineered: yes. Aden --end-- VNG0932c one-of-top-five-correct: 0.189609420027196 CThresh: 9.462146 25 best_is: cluster03 VNG0932c cluster00 -> 1hlkA 4.7468684 227 / 129 conP: 0.067 NO-CATH VNG0932c cluster01 -> 1ordA2 5.5164775 313 / 129 conP: 0.054 CATH-ID: 3.40.640.10 Ornithine decarboxylase. Chain: a, b. Ec: 4.1.1.17 VNG0932c cluster02 -> 1khmA0 5.5334008 89 / 129 conP: 0.161 CATH-ID: 3.30.70.210 Hnrnp k. Chain: a. Fragment: c-terminal kh domain, residues 379-463 of VNG0932c cluster03 -> 1qftA0 6.6752678 175 / 129 conP: 0.143 CATH-ID: 2.40.128.20 Female-specific histamine binding protein 2. Chain: a. Engineered: yes VNG0932c cluster04 -> 1bgw01 4.5483231 43 / 129 conP: 0.156 CATH-ID: 2.30.35.40 Topoisomerase. Chain: null. Fragment: residues 410 - 1202. Engineered: --end-- VNG0934h one-of-top-five-correct: 0.274330425780056 CThresh: 3.184285 75 best_is: cluster18 VNG0934h cluster00 -> 1b4bA0 6.2203852 71 / 56 conP: 0.282 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c. Fragment: oligomerization domain, VNG0934h cluster01 -> 1gtxA1 6.3590461 167 / 56 conP: 0.109 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG0934h cluster02 -> 1b4bA0 6.0807852 71 / 56 conP: 0.274 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c. Fragment: oligomerization domain, VNG0934h cluster03 -> 1gtxA1 5.9142099 167 / 56 conP: 0.098 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG0934h cluster04 -> 1gtxA1 6.3590461 167 / 56 conP: 0.109 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG0934h cluster18 -> 1h70A0 6.8038823 255 / 56 conP: 0.044 CATH-ID: 3.75.10.10 Ng,ng-dimethylarginine dimethylaminohydrolase. Chain: a. Engineered: y --end-- VNG09380 one-of-top-five-correct: 0.570956255790805 CThresh: 5.239309 75 best_is: cluster19 VNG09380 cluster00 -> 1csh01 7.4919194 306 / 89 conP: 0.089 CATH-ID: 1.10.580.10 Citrate synthase complexed with oxaloacetate and amidocarboxymethyldet VNG09380 cluster01 -> 1npc01 7.0112522 150 / 89 conP: 0.224 CATH-ID: 3.10.170.10 Neutral protease VNG09380 cluster02 -> 1uby00 8.2713705 348 / 89 conP: 0.081 CATH-ID: 1.10.600.10 Farnesyl diphosphate synthase. Chain: null. Synonym: fps. Engineered: VNG09380 cluster03 -> 1moq02 7.8836231 148 / 89 conP: 0.274 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG09380 cluster04 -> 1vib00 6.5944764 54 / 89 conP: 0.353 CATH-ID: 1.20.15.90 Neurotoxin b-iv. Chain: null VNG09380 cluster19 -> 1qspA0 10.429697 165 / 89 conP: 0.408 CATH-ID: 1.20.120.160 Ypd1. Chain: a, b. Engineered: yes. Biological_unit: monomer --end-- VNG09401 one-of-top-five-correct: 0.0393336172705286 CThresh: 3.256070 75 best_is: --end-- VNG09411 one-of-top-five-correct: 0.533026254726441 CThresh: 5.454156 75 best_is: cluster01 VNG09411 cluster00 -> 1b0pA2 7.6509448 157 / 96 conP: 0.265 CATH-ID: 3.40.50.920 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG09411 cluster01 -> 1jfrA0 9.9476441 260 / 96 conP: 0.248 CATH-ID: 3.40.50.950 Lipase. Chain: a, b. Engineered: yes VNG09411 cluster02 -> 1a04A1 5.8938749 124 / 96 conP: 0.216 CATH-ID: 3.40.50.3000 Nitrate/nitrite response regulator protein narl. Chain: a, b. Fragment VNG09411 cluster03 -> 1schA1 5.3542454 158 / 96 conP: 0.156 CATH-ID: 1.10.520.10 Peanut peroxidase, major cationic isozyme. Chain: a, b. Synonym: pnp. VNG09411 cluster04 -> 1jmvA 6.8853783 140 / 96 conP: 0.246 NO-CATH --end-- VNG0943c one-of-top-five-correct: 0.279028431459352 CThresh: 6.960392 29 best_is: cluster04 VNG0943c cluster00 -> 1djnA2 6.3341583 168 / 114 conP: 0.181 CATH-ID: 3.40.50.1140 Trimethylamine dehydrogenase. Chain: a, b. Engineered: yes VNG0943c cluster01 -> 1d4tA0 5.6162294 104 / 114 conP: 0.211 CATH-ID: 3.30.505.10 T cell signal transduction molecule sap. Chain: a. Fragment: sh2 domai VNG0943c cluster02 -> 1dlxA0 4.1947586 120 / 114 conP: 0.138 CATH-ID: 3.30.920.10 Frataxin. Chain: a. Fragment: c-terminal domain (91-130). Engineered: VNG0943c cluster03 -> 3pte00 6.1580665 347 / 114 conP: 0.066 CATH-ID: 3.40.710.10 D-alanyl-d-alanine carboxypeptidase/transpeptidase VNG0943c cluster04 -> 1bmtA1 7.2599686 87 / 114 conP: 0.323 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) --end-- VNG0945h one-of-top-five-correct: 0.476544717662969 CThresh: 6.971678 29 best_is: cluster00 VNG0945h cluster00 -> 1d1dA1 10.107735 140 / 92 conP: 0.353 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG0945h cluster01 -> 1b8bA0 7.7810887 533 / 92 conP: 0.014 CATH-ID: 3.20.70.20 Anaerobic ribonucleotide-triphosphate reductase large chain. Chain: a. VNG0945h cluster02 -> 1i36A 6.4238782 258 / 92 conP: 0.071 NO-CATH VNG0945h cluster03 -> 1b91A0 6.2032021 118 / 92 conP: 0.173 CATH-ID: 1.20.920.10 Histone acetyltransferase. Chain: a. Fragment: bromodomain. Engineered VNG0945h cluster04 -> 1jf7A 6.8116526 281 / 92 conP: 0.067 NO-CATH --end-- VNG09461 one-of-top-five-correct: 0.310603589504713 CThresh: 4.264035 75 best_is: cluster04 VNG09461 cluster00 -> 1cfr00 6.1316796 283 / 67 conP: 0.039 CATH-ID: 3.40.91.10 Restriction endonuclease. Chain: null. Fragment: residues 1 - 283. Syn VNG09461 cluster01 -> 1h72C 5.8159671 296 / 67 conP: 0.031 NO-CATH VNG09461 cluster02 -> 1jwfA 6.7652840 139 / 67 conP: 0.180 NO-CATH VNG09461 cluster03 -> 2a3dA0 6.6696961 73 / 67 conP: 0.299 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG09461 cluster04 -> 1bkdS1 7.5234252 189 / 67 conP: 0.140 CATH-ID: 1.20.870.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y --end-- VNG09492 one-of-top-five-correct: 0.367117392039369 CThresh: 2.977572 100 best_is: cluster06 VNG09492 cluster00 -> 1nhp03 6.5326854 113 / 86 conP: 0.348 CATH-ID: 3.30.390.30 Nadh peroxidase (npx) mutant with cys 42 replaced by ala (c42a) VNG09492 cluster01 -> 3ladA3 5.7320065 122 / 86 conP: 0.283 CATH-ID: 3.30.390.30 Dihydrolipoamide dehydrogenase VNG09492 cluster02 -> 3ladA3 5.5357087 122 / 86 conP: 0.271 CATH-ID: 3.30.390.30 Dihydrolipoamide dehydrogenase VNG09492 cluster03 -> 3ladA3 6.5326854 122 / 86 conP: 0.332 CATH-ID: 3.30.390.30 Dihydrolipoamide dehydrogenase VNG09492 cluster04 -> 1gkxA 5.8138123 308 / 86 conP: 0.081 NO-CATH VNG09492 cluster06 -> 1es8A0 7.1991333 192 / 86 conP: 0.254 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes --end-- VNG09541 one-of-top-five-correct: 0.402951186457891 CThresh: 6.106771 75 best_is: cluster07 VNG09541 cluster00 -> 1dceA1 6.5359301 317 / 109 conP: 0.092 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG09541 cluster01 -> 1dceA1 8.0350785 317 / 109 conP: 0.135 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG09541 cluster02 -> 1b3uA0 6.2847241 588 / 109 conP: 0.016 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG09541 cluster03 -> 1bby00 6.1665527 69 / 109 conP: 0.308 CATH-ID: 1.10.10.10 Rap30. Chain: null. Fragment: DNA-binding domain. Synonym: transcripti VNG09541 cluster04 -> 1pdnC2 5.8656823 55 / 109 conP: 0.309 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b VNG09541 cluster07 -> 1qsaA1 8.5090597 363 / 109 conP: 0.117 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein --end-- VNG0959h one-of-top-five-correct: 0.200836637500083 CThresh: 6.460579 75 best_is: cluster00 VNG0959h cluster00 -> 1ptvA0 6.6709875 297 / 78 conP: 0.040 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase 1b. Chain: a. Engineered: yes. Mutation: VNG0959h cluster01 -> 1brmA2 4.5523173 174 / 78 conP: 0.064 CATH-ID: 3.30.550.10 Aspartate-semialdehyde dehydrogenase. Chain: a, b, c. Synonym: asadh, VNG0959h cluster02 -> 1eluA1 4.5891855 115 / 78 conP: 0.105 CATH-ID: 3.30.70.160 L-cysteine/l-cystinE C-s lyase. Chain: a, b. Fragment: 11 residues of VNG0959h cluster03 -> 1rlr04 3.9941311 238 / 78 conP: 0.032 CATH-ID: 3.90.188.10 Ribonucleotide reductase protein r1. Chain: null. Synonym: ribonucleos VNG0959h cluster04 -> 1dxxA1 5.8555831 113 / 78 conP: 0.147 CATH-ID: 1.10.418.10 Dystrophin. Chain: a, b, c, d. Fragment: actin-binding. Engineered: ye --end-- VNG09641 one-of-top-five-correct: 0.641045486462563 CThresh: 2.452074 100 best_is: cluster13 VNG09641 cluster00 -> 1gajA0 5.3989368 253 / 70 conP: 0.072 CATH-ID: 3.40.50.300 High-affinity branched chain amino acid transport atp-binding protein. VNG09641 cluster01 -> 1furA1 5.6086329 134 / 70 conP: 0.213 CATH-ID: 1.10.275.10 FumarasE C. Chain: a, b. Synonym: fumc. Engineered: yes. Mutation: h18 VNG09641 cluster02 -> 1bl0A2 5.2109993 60 / 70 conP: 0.336 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG09641 cluster03 -> 1jkw01 5.7082128 176 / 70 conP: 0.155 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG09641 cluster04 -> 1e7aA2 5.3989368 90 / 70 conP: 0.284 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG09641 cluster13 -> 1b9nA1 10.403551 102 / 70 conP: 0.598 CATH-ID: 1.10.10.10 Mode. Chain: a, b. Engineered: yes --end-- VNG09651 one-of-top-five-correct: 0.362350971871384 CThresh: 2.170174 100 best_is: cluster14 VNG09651 cluster00 -> 1nkl00 6.1390610 78 / 54 conP: 0.296 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG09651 cluster01 -> 1dgnA0 6.1390610 89 / 54 conP: 0.267 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG09651 cluster02 -> 1dgnA0 6.5944764 89 / 54 conP: 0.293 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG09651 cluster03 -> 1geo01 5.6836457 166 / 54 conP: 0.105 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG09651 cluster04 -> 1ig6A0 5.2282304 107 / 54 conP: 0.181 CATH-ID: 1.10.150.60 Modulator recognition factor 2. Chain: a. Fragment: DNA-binding domain VNG09651 cluster14 -> 1alo02 7.5053070 119 / 54 conP: 0.268 CATH-ID: 1.10.150.120 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur --end-- VNG09690 one-of-top-five-correct: 0.296462761898061 CThresh: 3.749512 75 best_is: cluster04 VNG09690 cluster00 -> 1serA1 5.6792616 53 / 70 conP: 0.317 CATH-ID: 1.20.15.10 Seryl-tRNA synthetase complexed with tRNA-ser 2 (gga anticodon) VNG09690 cluster01 -> 1a6dA1 5.4975816 244 / 70 conP: 0.061 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer VNG09690 cluster02 -> 1a6dA1 5.7082128 244 / 70 conP: 0.065 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer VNG09690 cluster03 -> 1ekvA 5.4975816 365 / 70 conP: 0.019 NO-CATH VNG09690 cluster04 -> 1al302 7.0386290 136 / 70 conP: 0.230 CATH-ID: 3.40.190.60 Cys regulon transcriptional activator cysb. Chain: null. Fragment: cof --end-- VNG09711 one-of-top-five-correct: 0.0189543044914233 CThresh: 7.639008 25 best_is: --end-- VNG0982c one-of-top-five-correct: 0.171293424367701 CThresh: 6.989495 74 best_is: cluster14 VNG0982c cluster00 -> 1eccA2 4.7911437 137 / 95 conP: 0.113 CATH-ID: 3.40.50.90 Glutamine phosphoribosylpyrophosphate amidotransferase. Chain: a, b. B VNG0982c cluster01 -> 3psg01 5.3787763 165 / 95 conP: 0.109 CATH-ID: 2.40.70.10 Pepsinogen VNG0982c cluster02 -> 1a4801 4.2278503 111 / 95 conP: 0.115 CATH-ID: 3.30.200.20 Phosphoribosylaminoimidazole-succinocarboxamide synthase. Chain: null. VNG0982c cluster03 -> 1oacA1 4.5975739 80 / 95 conP: 0.154 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 VNG0982c cluster04 -> 1qj2C1 4.0896920 54 / 95 conP: 0.160 CATH-ID: 3.30.43.10 Carbon monoxide dehydrogenase. Chain: a, g. Carbon monoxide dehydrogen VNG0982c cluster14 -> 1dxrH2 5.9888002 139 / 95 conP: 0.150 CATH-ID: 3.90.50.10 Photosynthetic reaction center cytochromE C subun chain: c. Photosynth --end-- VNG09832 one-of-top-five-correct: 0.374533060229329 CThresh: 5.681110 75 best_is: cluster17 VNG09832 cluster00 -> 1bt3A 5.2858508 336 / 91 conP: 0.038 NO-CATH VNG09832 cluster01 -> 1qaxA1 6.9664098 110 / 91 conP: 0.268 CATH-ID: 3.30.70.420 3-hydroxy-3-methylglutaryl-coenzyme a reductase. Chain: a, b. Engineer VNG09832 cluster02 -> 2ifeA0 7.2825408 91 / 91 conP: 0.317 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin VNG09832 cluster03 -> 1djnA2 6.5128832 168 / 91 conP: 0.170 CATH-ID: 3.40.50.1140 Trimethylamine dehydrogenase. Chain: a, b. Engineered: yes VNG09832 cluster04 -> 1cxsA2 6.1780598 246 / 91 conP: 0.093 CATH-ID: 3.40.228.10 Dimethylsulfoxide reductase. Chain: a. Synonym: dmso reductase. Bis(mo VNG09832 cluster17 -> 1f46A 8.3983771 139 / 91 conP: 0.307 NO-CATH --end-- VNG0987h one-of-top-five-correct: 0.212708187817358 CThresh: 9.646347 25 best_is: cluster10 VNG0987h cluster00 -> 1mbe00 4.8545778 52 / 137 conP: 0.166 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG0987h cluster01 -> 1b7yB4 4.7449874 74 / 137 conP: 0.147 CATH-ID: 3.30.56.20 Phenylalanyl-tRNA synthetase. Chain: a. Synonym: phers. Phenylalanyl-t VNG0987h cluster02 -> 3tgl00 6.6333973 265 / 137 conP: 0.100 CATH-ID: 3.40.50.950 Triacylglycerol acylhydrolase VNG0987h cluster03 -> 5eat02 5.5971055 371 / 137 conP: 0.046 CATH-ID: 1.10.615.10 5-epi-aristolochene synthase. Chain: null. Synonym: 5-epi-aristolochen VNG0987h cluster04 -> 1ec5A0 5.7383489 48 / 137 conP: 0.207 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG0987h cluster10 -> 1fuyB 6.9705010 393 / 137 conP: 0.060 NO-CATH --end-- VNG0988h one-of-top-five-correct: 0.307282931665253 CThresh: 6.105446 75 best_is: cluster09 VNG0988h cluster00 -> 1a5t03 5.4177814 116 / 79 conP: 0.140 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG0988h cluster01 -> 1fteA 5.5453700 116 / 79 conP: 0.145 NO-CATH VNG0988h cluster02 -> 1ayx00 7.2453751 492 / 79 conP: 0.010 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes VNG0988h cluster03 -> 1e52A0 6.2715493 56 / 79 conP: 0.262 CATH-ID: 4.10.860.10 Excinuclease abc subunit . Chain: a, b. Fragment: c-terminal domain re VNG0988h cluster04 -> 1gcb_ 7.0423091 452 / 79 conP: 0.013 NO-CATH VNG0988h cluster09 -> 4crxA2 8.0427002 111 / 79 conP: 0.267 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog --end-- VNG09890 one-of-top-five-correct: 0.260640711195052 CThresh: 7.551268 25 best_is: cluster08 VNG09890 cluster00 -> 1qmmA5 5.2683639 194 / 108 conP: 0.099 CATH-ID: 1.10.1070.11 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG09890 cluster01 -> 1aisB2 5.6400788 94 / 108 conP: 0.189 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG09890 cluster02 -> 1f1sA 6.7149935 814 / 108 conP: 0.003 NO-CATH VNG09890 cluster03 -> 1mtyB0 5.7434997 384 / 108 conP: 0.035 CATH-ID: 1.10.620.20 Methane monooxygenase hydroxylase. Chain: d, e, b, c, g, h. Biological VNG09890 cluster04 -> 1fjgI0 4.5001901 127 / 108 conP: 0.119 CATH-TRUNC VNG09890 cluster08 -> 1gai00 7.4089941 472 / 108 conP: 0.032 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc --end-- VNG0990h one-of-top-five-correct: 0.282325640355853 CThresh: 3.756867 75 best_is: cluster10 VNG0990h cluster00 -> 1gdtA3 5.2792900 43 / 56 conP: 0.271 CATH-ID: 1.10.10.60 Gamma-delta resolvase. Chain: a, b. Synonym: gd resolvase. Engineered: VNG0990h cluster01 -> 14psA0 6.4967938 226 / 56 conP: 0.051 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG0990h cluster02 -> 1qs2A2 5.3705710 198 / 56 conP: 0.052 CATH-ID: 2.30.100.10 Adp-ribosyltransferase. Chain: a. Fragment: mature vip2. Engineered: y VNG0990h cluster03 -> 1eyvA0 7.0263004 131 / 56 conP: 0.170 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr VNG0990h cluster04 -> 1aoiD0 6.0463047 99 / 56 conP: 0.188 CATH-ID: 1.10.20.10 Histone h3. Chain: a, e. Engineered: yes. Histone h4. Chain: b, f. Eng VNG0990h cluster10 -> 1aa7A2 7.1725275 78 / 56 conP: 0.293 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer --end-- VNG0991h one-of-top-five-correct: 0.447422145446868 CThresh: 7.120305 25 best_is: cluster11 VNG0991h cluster00 -> 1bwoA0 8.6064435 90 / 112 conP: 0.394 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 VNG0991h cluster01 -> 1fapB0 7.2428431 95 / 112 conP: 0.298 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG0991h cluster02 -> 1bwoA0 6.6134831 90 / 112 conP: 0.268 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 VNG0991h cluster03 -> 1dik02 7.0568501 63 / 112 conP: 0.330 CATH-ID: 1.10.189.10 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG0991h cluster04 -> 1eyvA0 6.9103301 131 / 112 conP: 0.236 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr VNG0991h cluster11 -> 1a36A5 9.3988839 72 / 112 conP: 0.477 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain --end-- VNG0994h one-of-top-five-correct: 0.380956181585743 CThresh: 2.431006 100 best_is: cluster15 VNG0994h cluster00 -> 1vin01 6.7108836 139 / 66 conP: 0.242 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG0994h cluster01 -> 1efuB2 6.2820806 86 / 66 conP: 0.331 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran VNG0994h cluster02 -> 1bu2A2 7.1396865 102 / 66 conP: 0.348 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG0994h cluster03 -> 1psrA0 6.9252851 100 / 66 conP: 0.339 CATH-ID: 1.10.238.10 Psoriasin. Chain: a, b. Synonym: s100a7. Engineered: yes. Other_detail VNG0994h cluster04 -> 1psrA0 6.4964821 100 / 66 conP: 0.312 CATH-ID: 1.10.238.10 Psoriasin. Chain: a, b. Synonym: s100a7. Engineered: yes. Other_detail VNG0994h cluster15 -> 1c9bA2 7.5684895 106 / 66 conP: 0.367 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te --end-- VNG0995h one-of-top-five-correct: 0.242936282655148 CThresh: 5.069381 75 best_is: cluster03 VNG0995h cluster00 -> 1jkw02 5.8318584 101 / 61 conP: 0.153 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG0995h cluster01 -> 1cuk02 6.4018579 76 / 61 conP: 0.221 CATH-ID: 1.10.150.30 Ruva protein. Chain: null. Engineered: yes VNG0995h cluster02 -> 1ef4A0 5.4127582 55 / 61 conP: 0.213 CATH-ID: 1.10.10.60 DNA-directed RNA polymerase. Chain: a. Fragment: subunit rpb10. Synony VNG0995h cluster03 -> 1t7pA4 7.0962909 101 / 61 conP: 0.206 CATH-ID: 1.10.473.10 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi VNG0995h cluster04 -> 1ef4A0 6.0921444 55 / 61 conP: 0.248 CATH-ID: 1.10.10.60 DNA-directed RNA polymerase. Chain: a. Fragment: subunit rpb10. Synony --end-- VNG09962 one-of-top-five-correct: 0.530223260006704 CThresh: 4.122451 75 best_is: cluster00 VNG09962 cluster00 -> 1dq3A3 9.8366043 87 / 73 conP: 0.516 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG09962 cluster01 -> 1cd1A2 7.3647714 95 / 73 conP: 0.326 CATH-ID: 2.60.40.10 Cd1. Chain: a, b, c, d. Fragment: alpha1, alpha2, alpha3, beta2-microg VNG09962 cluster02 -> 1dq3A4 6.9344902 114 / 73 conP: 0.263 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG09962 cluster03 -> 1vdeA3 9.8366043 109 / 73 conP: 0.463 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes VNG09962 cluster04 -> 1lba00 6.6215251 146 / 73 conP: 0.193 CATH-ID: 3.40.80.10 Lysozyme mutant with ala 6 replaced by lys and residues 2 - 5 deleted --end-- VNG09963 one-of-top-five-correct: 0.435410192881373 CThresh: 5.247408 75 best_is: cluster16 VNG09963 cluster00 -> 1adjA2 5.8938749 96 / 122 conP: 0.329 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Biological_unit: active a VNG09963 cluster01 -> 1moq02 6.5038855 148 / 122 conP: 0.303 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG09963 cluster02 -> 1scuA2 6.2346912 166 / 122 conP: 0.266 CATH-ID: 3.40.50.261 Succinyl-coa synthetase (succinate-coa ligase) (adp-forming) VNG09963 cluster03 -> 1cpy02 5.8484850 72 / 122 conP: 0.358 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a VNG09963 cluster04 -> 1qqcA2 4.9919617 252 / 122 conP: 0.134 CATH-ID: 3.30.420.10 DNA polymerase ii. Chain: a. Engineered: yes. Biological_unit: monomer VNG09963 cluster16 -> 1enh00 8.1884300 54 / 122 conP: 0.548 CATH-ID: 1.10.10.60 Engrailed homeodomain --end-- VNG09970 one-of-top-five-correct: 0.341685293953187 CThresh: 6.633031 75 best_is: cluster03 VNG09970 cluster00 -> 1k94A 5.8028594 165 / 106 conP: 0.155 NO-CATH VNG09970 cluster01 -> 1c17M0 5.3116931 142 / 106 conP: 0.156 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG09970 cluster02 -> 2phy00 4.9422248 125 / 106 conP: 0.157 CATH-ID: 3.30.450.20 Photoactive yellow protein. Chain: null. Synonym: pyp VNG09970 cluster03 -> 1cbzA1 8.0971255 315 / 106 conP: 0.116 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG09970 cluster04 -> 1af800 6.4285971 86 / 106 conP: 0.270 CATH-ID: 1.10.1200.10 Actinorhodin polyketide synthase acyl carrier protein. Chain: null. Sy --end-- VNG0999h one-of-top-five-correct: 0.461502429047356 CThresh: 5.342234 75 best_is: cluster18 VNG0999h cluster00 -> 1a6dA1 7.1327007 244 / 88 conP: 0.120 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer VNG0999h cluster01 -> 1a8h01 8.4989962 212 / 88 conP: 0.206 CATH-ID: 1.10.730.10 Methionyl-tRNA synthetase. Chain: null. Synonym: metrs. Biological_uni VNG0999h cluster02 -> 1eg3A3 6.1638458 82 / 88 conP: 0.271 CATH-ID: 1.10.238.60 Dystrophin. Chain: a. Fragment: ww domain. Engineered: yes VNG0999h cluster03 -> 1lre00 7.5277256 81 / 88 conP: 0.358 CATH-ID: 1.20.81.10 Receptor-associated protein. Chain: null. Fragment: n-terminal domain, VNG0999h cluster04 -> 1bgvA3 7.1432729 76 / 88 conP: 0.341 CATH-ID: 1.10.285.10 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer VNG0999h cluster18 -> 1e7aA5 9.2944826 112 / 88 conP: 0.420 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG1000h one-of-top-five-correct: 0.342304932923686 CThresh: 3.895565 75 best_is: cluster04 VNG1000h cluster00 -> 1b3uA0 6.8417742 588 / 68 conP: 0.002 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG1000h cluster01 -> 1c5a00 6.7554423 65 / 68 conP: 0.345 CATH-ID: 1.20.91.20 Des-arg==74==-complement c5a VNG1000h cluster02 -> 1ryp20 6.9049213 233 / 68 conP: 0.089 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG1000h cluster03 -> 1c9bA2 6.8417742 106 / 68 conP: 0.261 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG1000h cluster04 -> 1vin02 7.7284692 113 / 68 conP: 0.298 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG1003h one-of-top-five-correct: 0.262751048377623 CThresh: 6.084705 75 best_is: cluster08 VNG1003h cluster00 -> 1juqA 4.3583988 148 / 73 conP: 0.073 NO-CATH VNG1003h cluster01 -> 1qsaA2 5.3990051 70 / 73 conP: 0.183 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG1003h cluster02 -> 1gnwA2 5.8142472 125 / 73 conP: 0.130 CATH-ID: 1.20.1050.10 Glutathione s-transferase. Chain: a, b. Engineered: yes. Biological_un VNG1003h cluster03 -> 1mhlC0 3.7344637 466 / 73 conP: 0.003 CATH-ID: 1.10.640.10 Myeloperoxidase. Chain: a, c, b, d. Other_details: isoform c VNG1003h cluster04 -> 1e20A0 4.1068389 185 / 73 conP: 0.049 CATH-ID: 3.40.50.1950 Halotolerance protein hal3. Chain: a. Synonym: hal3. Engineered: yes VNG1003h cluster08 -> 1nfiE0 7.5707574 213 / 73 conP: 0.096 CATH-ID: 1.25.40.20 Nf-kappa-b p65. Chain: a, c. Engineered: yes. Nf-kappa-b p50. Chain: b --end-- VNG1005h one-of-top-five-correct: 0.274205251148147 CThresh: 4.767811 75 best_is: cluster15 VNG1005h cluster00 -> 1qqnA4 6.3781003 84 / 69 conP: 0.245 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG1005h cluster01 -> 1jwbB 6.6878023 240 / 69 conP: 0.068 NO-CATH VNG1005h cluster02 -> 1adjA2 5.1088143 96 / 69 conP: 0.166 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Biological_unit: active a VNG1005h cluster03 -> 1f5mA0 7.2242911 176 / 69 conP: 0.140 CATH-ID: 3.30.450.40 Gaf. Chain: a, b. Engineered: yes VNG1005h cluster04 -> 1jd3A 7.0127434 164 / 69 conP: 0.148 NO-CATH VNG1005h cluster15 -> 1adjA2 7.2242911 96 / 69 conP: 0.268 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Biological_unit: active a --end-- VNG1007h one-of-top-five-correct: 0.438092574145966 CThresh: 2.421169 100 best_is: cluster18 VNG1007h cluster00 -> 1guxB0 6.9252851 141 / 66 conP: 0.250 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG1007h cluster01 -> 1psrA0 6.7108836 100 / 66 conP: 0.326 CATH-ID: 1.10.238.10 Psoriasin. Chain: a, b. Synonym: s100a7. Engineered: yes. Other_detail VNG1007h cluster02 -> 1aisB1 6.7108836 99 / 66 conP: 0.328 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG1007h cluster03 -> 1vin01 6.7108836 139 / 66 conP: 0.242 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG1007h cluster04 -> 1guxB0 7.1396865 141 / 66 conP: 0.261 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG1007h cluster18 -> 1f7cA0 8.2116939 182 / 66 conP: 0.238 CATH-ID: 1.10.555.10 Rhogap protein. Chain: a. Fragment: gtpase activating protein (gap) fo --end-- VNG10130 one-of-top-five-correct: 0.509711785294403 CThresh: 7.253371 25 best_is: cluster05 VNG10130 cluster00 -> 1uby00 7.7926557 348 / 141 conP: 0.159 CATH-ID: 1.10.600.10 Farnesyl diphosphate synthase. Chain: null. Synonym: fps. Engineered: VNG10130 cluster01 -> 1qsaA2 9.0783115 70 / 141 conP: 0.522 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG10130 cluster02 -> 1ocrE0 7.4139705 109 / 141 conP: 0.357 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG10130 cluster03 -> 1jkw02 7.1505110 101 / 141 conP: 0.349 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG10130 cluster04 -> 1b3uA0 9.0086784 588 / 141 conP: 0.075 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG10130 cluster05 -> 1jwfA 9.4831258 139 / 141 conP: 0.465 NO-CATH --end-- VNG1015h one-of-top-five-correct: 0.327241573003003 CThresh: 8.425313 25 best_is: cluster02 VNG1015h cluster00 -> 1lci04 5.3122002 99 / 123 conP: 0.168 CATH-ID: 3.30.300.30 Luciferase. Chain: null. Engineered: yes VNG1015h cluster01 -> 1dqaA2 7.2162395 216 / 123 conP: 0.152 CATH-ID: 3.90.770.10 Hmg-coa reductase. Chain: a, b, c, d. Fragment: catalytic portion. Eng VNG1015h cluster02 -> 1aep00 8.3451941 153 / 123 conP: 0.262 CATH-ID: 1.20.120.20 Apolipophorin iii VNG1015h cluster03 -> 1e7aA2 6.0121498 90 / 123 conP: 0.206 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1015h cluster04 -> 1qmgA2 6.0384693 293 / 123 conP: 0.076 CATH-ID: 1.10.572.10 Acetohydroxy-acid isomeroreductase. Chain: a, b, c, d. Synonym: keto-a --end-- VNG10200 one-of-top-five-correct: 0.58226859937764 CThresh: 7.657195 25 best_is: cluster08 VNG10200 cluster00 -> 1ayx00 9.6212960 492 / 116 conP: 0.067 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes VNG10200 cluster01 -> 2reb02 6.5800857 59 / 116 conP: 0.288 CATH-ID: 3.30.250.10 Reca protein VNG10200 cluster02 -> 2eiaA1 7.0638168 132 / 116 conP: 0.231 CATH-ID: 1.10.375.10 Eiav capsid protein p26. Chain: a, b. Engineered: yes VNG10200 cluster03 -> 1f5xA0 8.1315296 208 / 116 conP: 0.205 CATH-ID: 1.20.900.10 Rho-gef vav. Chain: a. Fragment: dbl homology domain. Engineered: yes VNG10200 cluster04 -> 1rpo00 8.2468258 61 / 116 conP: 0.393 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid VNG10200 cluster08 -> 1e2aA0 11.038290 102 / 116 conP: 0.531 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia --end-- VNG10201 one-of-top-five-correct: 0.449456156861032 CThresh: 6.986894 41 best_is: cluster14 VNG10201 cluster00 -> 1ytfD1 6.4160811 53 / 127 conP: 0.341 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG10201 cluster01 -> 1dlwA0 7.6549339 116 / 127 conP: 0.343 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a. Engineered: yes VNG10201 cluster02 -> 1bha00 7.1876869 67 / 127 conP: 0.374 CATH-ID: 1.20.15.140 Bacteriorhodopsin (proteolytic fragment 1 - 71, solubilized in sds mic VNG10201 cluster03 -> 1jgjA0 7.1746704 217 / 127 conP: 0.207 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG10201 cluster04 -> 1ag200 7.0971656 103 / 127 conP: 0.323 CATH-ID: 1.10.790.10 Major prion protein. Chain: null. Fragment: domain 121 - 231. Synonym: VNG10201 cluster14 -> 1ixmA1 9.0193370 59 / 127 conP: 0.514 CATH-ID: 1.20.15.100 Sporulation response regulatory protein. Chain: a, b. Synonym: spo0b. --end-- VNG10350 one-of-top-five-correct: 0.329265342854247 CThresh: 6.975518 28 best_is: cluster06 VNG10350 cluster00 -> 1nhp02 5.6321720 150 / 96 conP: 0.130 CATH-ID: 3.50.50.60 Nadh peroxidase (npx) mutant with cys 42 replaced by ala (c42a) VNG10350 cluster01 -> 1gnwA1 6.9416532 85 / 96 conP: 0.260 CATH-ID: 3.40.30.10 Glutathione s-transferase. Chain: a, b. Engineered: yes. Biological_un VNG10350 cluster02 -> 1qb7A0 6.9948004 236 / 96 conP: 0.106 CATH-ID: 3.40.50.90 Adenine phosphoribosyltransferase. Chain: a. Synonym: aprt. Engineered VNG10350 cluster03 -> 1a1s02 5.3542454 160 / 96 conP: 0.114 CATH-ID: 3.40.50.1370 Ornithine carbamoyltransferase. Chain: null. Synonym: ornithine transc VNG10350 cluster04 -> 1eemA1 5.4036472 122 / 96 conP: 0.147 CATH-ID: 3.40.30.10 Glutathione-s-transferase. Chain: a. Engineered: yes VNG10350 cluster06 -> 2pgd01 8.3276230 180 / 96 conP: 0.208 CATH-ID: 3.40.50.720 6-phosphogluconate dehydrogenase (6-pgdh) --end-- VNG10351 one-of-top-five-correct: 0.185446610956292 CThresh: 4.566544 75 best_is: cluster04 VNG10351 cluster00 -> 1b25A2 5.4713351 178 / 59 conP: 0.065 CATH-ID: 1.10.569.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG10351 cluster01 -> 1mpgA3 5.0848658 52 / 59 conP: 0.217 CATH-ID: 1.10.15.10 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine VNG10351 cluster02 -> 1aua02 5.2495850 83 / 59 conP: 0.167 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG10351 cluster03 -> 1qckA0 5.2343985 89 / 59 conP: 0.157 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG10351 cluster04 -> 1cuk03 5.9741910 48 / 59 conP: 0.273 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes --end-- VNG10353 one-of-top-five-correct: 0.156036401956177 CThresh: 9.288984 25 best_is: cluster01 VNG10353 cluster00 -> 1ns1A0 4.9823338 73 / 120 conP: 0.145 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re VNG10353 cluster01 -> 1a8vA1 6.1570570 49 / 120 conP: 0.215 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG10353 cluster02 -> 1fjgM1 5.8833445 71 / 120 conP: 0.182 CATH-TRUNC VNG10353 cluster03 -> 1l6sA 4.9906234 322 / 120 conP: 0.038 NO-CATH VNG10353 cluster04 -> 1qrjB2 4.9559766 81 / 120 conP: 0.138 CATH-ID: 1.10.1200.30 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E --end-- VNG10354 one-of-top-five-correct: 0.273922754073655 CThresh: 6.978762 37 best_is: cluster10 VNG10354 cluster00 -> 1moq01 6.6701065 218 / 111 conP: 0.145 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG10354 cluster01 -> 1geo01 6.3039066 166 / 111 conP: 0.174 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG10354 cluster02 -> 1eqfA1 5.9075623 142 / 111 conP: 0.180 CATH-ID: 1.20.920.10 RNA polymerase ii transcription initiation factor. Chain: a. Fragment: VNG10354 cluster03 -> 1f4qA0 6.6701065 161 / 111 conP: 0.195 CATH-ID: 1.10.238.10 Grancalcin. Chain: a, b. Engineered: yes VNG10354 cluster04 -> 1hbkA0 5.6510299 89 / 111 conP: 0.221 CATH-ID: 1.20.80.10 Acyl-coa binding protein. Chain: a. Synonym: acbp. Engineered: yes VNG10354 cluster10 -> 1cokA0 7.2667366 68 / 111 conP: 0.341 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi --end-- VNG10381 one-of-top-five-correct: 0.482037036530322 CThresh: 7.567744 25 best_is: cluster07 VNG10381 cluster00 -> 1rkd02 6.0771438 256 / 118 conP: 0.102 CATH-ID: 3.90.77.20 Ribokinase. Chain: null. Engineered: yes. Biological_unit: homodimer VNG10381 cluster01 -> 1udb02 7.5121449 212 / 118 conP: 0.182 CATH-ID: 3.40.50.720 Udp-galactose-4-epimerase. Chain: null. Synonym: epimerase. Biological VNG10381 cluster02 -> 1e7aA2 5.2025119 90 / 118 conP: 0.191 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG10381 cluster03 -> 1ag8A2 5.2462133 190 / 118 conP: 0.117 CATH-ID: 3.40.309.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Biological_unit: homotetram VNG10381 cluster04 -> 1frvA1 9.6697486 177 / 118 conP: 0.338 CATH-ID: 3.40.50.700 Hydrogenase. Chain: a, b, c, d. Synonym: cytochrome-c3 hydrogenase. Ec VNG10381 cluster07 -> 1g5cA0 9.8462730 169 / 118 conP: 0.360 CATH-ID: 3.40.1050.10 Beta-carbonic anhydrase. Chain: a, b, c, d, e, f. Engineered: yes --end-- VNG1046h one-of-top-five-correct: 0.378714889686797 CThresh: 7.130690 25 best_is: cluster07 VNG1046h cluster00 -> 2dpmA1 8.7992944 155 / 96 conP: 0.258 CATH-ID: 3.40.50.150 Adenine-specific methyltransferase dpnii 1. Chain: a. Synonym: m.Dpnii VNG1046h cluster01 -> 1a7cA1 5.7370287 193 / 96 conP: 0.098 CATH-ID: 3.30.497.10 Plasminogen activator inhibitor type 1. Chain: a. Synonym: pai-1. Engi VNG1046h cluster02 -> 2ebn00 6.3112035 285 / 96 conP: 0.062 CATH-ID: 3.20.20.80 Endo-beta-n-acetylglucosaminidase f1 (endoglycosidase f1, endo f1) VNG1046h cluster03 -> 1qr6A2 6.1580850 265 / 96 conP: 0.068 CATH-ID: 3.40.50.720 Malic enzyme 2. Chain: a, b. Engineered: yes. Mutation: yes VNG1046h cluster04 -> 1fukA0 7.2897418 157 / 96 conP: 0.182 CATH-ID: 3.40.50.300 Eukaryotic initiation factor 4a. Chain: a. Fragment: carboxy terminal VNG1046h cluster07 -> 2lbp02 8.9906861 145 / 96 conP: 0.284 CATH-ID: 3.40.50.3600 Leucine-binding protein ( LBP ) --end-- VNG1047h one-of-top-five-correct: 0.349572852037935 CThresh: 4.159812 75 best_is: cluster19 VNG1047h cluster00 -> 1gab00 6.6450636 53 / 73 conP: 0.368 CATH-ID: 1.10.8.40 Protein pab. Chain: null. Fragment: albumin-binding domain, residues 2 VNG1047h cluster01 -> 1e5kA0 6.3348410 188 / 73 conP: 0.127 CATH-ID: 3.90.550.30 Molybdopterin-guanine dinucleotide biosynthesis protein a. Chain: a. S VNG1047h cluster02 -> 1e7aA5 6.6461605 112 / 73 conP: 0.249 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1047h cluster03 -> 1eyrA0 6.2302039 220 / 73 conP: 0.094 CATH-ID: 3.90.550.30 Cmp-n-acetylneuraminic acid synthetase. Chain: a, b. Synonym: acylneur VNG1047h cluster04 -> 1iizA 5.7168828 120 / 73 conP: 0.190 NO-CATH VNG1047h cluster19 -> 1d2nA2 7.8223923 67 / 73 conP: 0.417 CATH-ID: 1.10.8.60 N-ethylmaleimide-sensitive fusion protein. Chain: a. Fragment: d2. Eng --end-- VNG1050h one-of-top-five-correct: 0.14199983520337 CThresh: 8.152145 25 best_is: cluster00 VNG1050h cluster00 -> 1hwxA1 5.4521328 51 / 115 conP: 0.214 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG1050h cluster01 -> 1dpsA0 4.4756734 159 / 115 conP: 0.096 CATH-TRUNC VNG1050h cluster02 -> 1qu6A2 5.2368336 76 / 115 conP: 0.180 CATH-ID: 3.30.160.20 Protein kinase pkr. Chain: a. Fragment: dsrna-binding n-terminal domai VNG1050h cluster03 -> 1stu00 5.0438444 68 / 115 conP: 0.179 CATH-ID: 3.30.160.20 Maternal effect protein staufen. Domain: ds RNA binding domain 3. Othe VNG1050h cluster04 -> 1qgkA 4.7623713 876 / 115 conP: 0.001 NO-CATH --end-- VNG10531 one-of-top-five-correct: 0.423888685996521 CThresh: 6.989474 64 best_is: cluster11 VNG10531 cluster00 -> 1e7aA2 8.3292037 90 / 115 conP: 0.390 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG10531 cluster01 -> 1e7aA4 8.2703080 86 / 115 conP: 0.392 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG10531 cluster02 -> 2ng101 7.6930377 89 / 115 conP: 0.349 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG10531 cluster03 -> 1ytfD1 7.7899762 53 / 115 conP: 0.407 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG10531 cluster04 -> 1jf7A 6.4901909 281 / 115 conP: 0.105 NO-CATH VNG10531 cluster11 -> 1a5t03 9.0091502 116 / 115 conP: 0.399 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u --end-- VNG10541 one-of-top-five-correct: 0.458710167216683 CThresh: 7.156579 25 best_is: cluster05 VNG10541 cluster00 -> 1aa7A2 6.4736947 78 / 115 conP: 0.280 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG10541 cluster01 -> 1ab8A0 7.2981822 177 / 115 conP: 0.212 CATH-ID: 3.50.6.10 Adenylyl cyclase. Chain: a, b. Fragment: c2 domain. Engineered: yes. B VNG10541 cluster02 -> 1e3wA0 5.5453910 251 / 115 conP: 0.094 CATH-ID: 3.40.50.720 Short chain 3-hydroxyacyl-coa dehydrogenase. Chain: a, b, c, d. Synony VNG10541 cluster03 -> 1ytn00 5.7887836 283 / 115 conP: 0.084 CATH-ID: 3.90.190.10 Yersinia protein tyrosine phosphatase. Chain: null. Fragment: catalyti VNG10541 cluster04 -> 1qgkA 7.8415702 876 / 115 conP: 0.004 NO-CATH VNG10541 cluster05 -> 1a6dA1 9.4717343 244 / 115 conP: 0.251 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer --end-- VNG10542 one-of-top-five-correct: 0.505729843470996 CThresh: 4.620374 75 best_is: cluster05 VNG10542 cluster00 -> 1qtwA0 8.4379860 285 / 72 conP: 0.083 CATH-ID: 3.20.20.150 Endonuclease iv. Chain: a. Engineered: yes VNG10542 cluster01 -> 1l2qA 8.5634959 457 / 72 conP: 0.017 NO-CATH VNG10542 cluster02 -> 1udb02 7.3104139 212 / 72 conP: 0.118 CATH-ID: 3.40.50.720 Udp-galactose-4-epimerase. Chain: null. Synonym: epimerase. Biological VNG10542 cluster03 -> 1e15A 8.7723429 496 / 72 conP: 0.013 NO-CATH VNG10542 cluster04 -> 2pii00 7.9369549 112 / 72 conP: 0.298 CATH-ID: 3.30.70.120 Pii. Chain: null. Synonym: glnb product. Engineered: yes VNG10542 cluster05 -> 1bhgA3 9.8165778 303 / 72 conP: 0.102 CATH-ID: 3.20.20.80 Beta-glucuronidase. Chain: a, b. Synonym: gus gene product. Engineered --end-- VNG10621 one-of-top-five-correct: 0.377730471381246 CThresh: 2.427814 100 best_is: cluster00 VNG10621 cluster00 -> 1a6q02 7.8483209 69 / 52 conP: 0.410 CATH-ID: 1.10.920.10 Phosphatase 2c. Chain: null. Engineered: yes VNG10621 cluster01 -> 1c82A 6.0060175 719 / 52 conP: 0.000 NO-CATH VNG10621 cluster02 -> 1cfr00 7.3877451 283 / 52 conP: 0.033 CATH-ID: 3.40.91.10 Restriction endonuclease. Chain: null. Fragment: residues 1 - 283. Syn VNG10621 cluster03 -> 1jwfA 6.3179116 139 / 52 conP: 0.148 NO-CATH VNG10621 cluster04 -> 1fqvB0 7.1574571 137 / 52 conP: 0.186 CATH-ID: 3.30.710.10 Skp2. Chain: a, c, e, g, i, k, m, o. Fragment: 101-436. Synonym: cycli --end-- VNG10661 one-of-top-five-correct: 0.2470882860048 CThresh: 3.360939 75 best_is: cluster10 VNG10661 cluster00 -> 1e6uA1 5.3705710 220 / 56 conP: 0.044 CATH-ID: 3.40.50.720 Gdp-fucose synthetase. Chain: a. Synonym: gdp-4-keto 6-deoxy-mannose 3 VNG10661 cluster01 -> 1ihgA 5.8210601 364 / 56 conP: 0.009 NO-CATH VNG10661 cluster02 -> 1a9xA1 5.1453265 116 / 56 conP: 0.136 CATH-ID: 3.40.50.20 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG10661 cluster03 -> 2cevA0 5.5958156 298 / 56 conP: 0.018 CATH-ID: 3.40.800.10 Arginase. Chain: a, b, c, d, e, f. Engineered: yes. Biological_unit: h VNG10661 cluster04 -> 1ez0A2 5.2469557 185 / 56 conP: 0.064 CATH-ID: 3.40.309.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG10661 cluster10 -> 1e6uA1 6.4967938 220 / 56 conP: 0.060 CATH-ID: 3.40.50.720 Gdp-fucose synthetase. Chain: a. Synonym: gdp-4-keto 6-deoxy-mannose 3 --end-- VNG10671 one-of-top-five-correct: 0.436498893276799 CThresh: 4.680482 75 best_is: cluster06 VNG10671 cluster00 -> 1k5hA 6.5375496 398 / 90 conP: 0.041 NO-CATH VNG10671 cluster01 -> 1kdxA0 8.1007409 81 / 90 conP: 0.439 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG10671 cluster02 -> 1adeA2 6.1736708 100 / 90 conP: 0.280 CATH-ID: 1.10.300.10 Adenylosuccinate synthetase. Chain: a, b. Domain: c-terminal. Ec: 6.3. VNG10671 cluster03 -> 1a0aA0 5.3126230 63 / 90 conP: 0.288 CATH-ID: 4.10.280.10 Phosphate system positive regulatory protein pho4. Chain: a, b. Fragme VNG10671 cluster04 -> 1i6kA 7.0682014 316 / 90 conP: 0.086 NO-CATH VNG10671 cluster06 -> 1jud02 8.6720963 75 / 90 conP: 0.492 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG1085h one-of-top-five-correct: 0.217364178110056 CThresh: 5.091782 75 best_is: cluster19 VNG1085h cluster00 -> 1do0A3 6.4053723 109 / 71 conP: 0.198 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes VNG1085h cluster01 -> 1do0A3 5.6736134 109 / 71 conP: 0.167 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes VNG1085h cluster02 -> 3inkC0 4.5759281 121 / 71 conP: 0.115 CATH-ID: 1.20.120.200 Interleukin 2 mutant with cys 125 replaced by ala (c125a) VNG1085h cluster03 -> 1d3yA1 4.3287270 71 / 71 conP: 0.165 CATH-ID: 1.10.10.10 DNA topoisomerase vi a subunit. Chain: a, b. Fragment: DNA binding cor VNG1085h cluster04 -> 1aoiC0 4.6249578 115 / 71 conP: 0.122 CATH-ID: 1.10.20.10 Histone h3. Chain: a, e. Engineered: yes. Histone h4. Chain: b, f. Eng VNG1085h cluster19 -> 1bq7A0 6.4833187 186 / 71 conP: 0.106 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi --end-- VNG1086c one-of-top-five-correct: 0.585226431247807 CThresh: 4.124842 75 best_is: cluster00 VNG1086c cluster00 -> 1vin02 10.038915 113 / 91 conP: 0.552 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG1086c cluster01 -> 1a8vA1 7.3290605 49 / 91 conP: 0.480 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG1086c cluster02 -> 1aep00 7.2311798 153 / 91 conP: 0.287 CATH-ID: 1.20.120.20 Apolipophorin iii VNG1086c cluster03 -> 1pdo00 7.7265968 129 / 91 conP: 0.359 CATH-ID: 3.40.50.510 Mannose permease. Chain: null. Fragment: iia ==man== domain, residues VNG1086c cluster04 -> 1ayx00 7.2311798 492 / 91 conP: 0.029 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes --end-- VNG1088c one-of-top-five-correct: 0.347405836000619 CThresh: 4.668810 75 best_is: cluster07 VNG1088c cluster00 -> 1a1w00 6.1316796 83 / 67 conP: 0.231 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG1088c cluster01 -> 1kte00 6.2428316 105 / 67 conP: 0.198 CATH-ID: 3.40.30.10 Thioltransferase. Chain: null. Engineered: yes VNG1088c cluster02 -> 1e79A3 6.6696961 131 / 67 conP: 0.175 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG1088c cluster03 -> 1fc3A0 5.8159671 119 / 67 conP: 0.158 CATH-ID: 1.10.10.60 Spo0a. Chain: a, b, c. Fragment: c-terminal domain. Synonym: sporulati VNG1088c cluster04 -> 1eca00 6.0293993 136 / 67 conP: 0.144 CATH-ID: 1.10.490.10 Hemoglobin (erythrocruorin, aquo met) VNG1088c cluster07 -> 1mun02 8.1637220 112 / 67 conP: 0.285 CATH-ID: 1.10.340.10 Adenine glycosylase. Chain: null. Fragment: catalytic domain. Engineer --end-- VNG1090h one-of-top-five-correct: 0.241108270549447 CThresh: 6.141717 75 best_is: cluster06 VNG1090h cluster00 -> 1e8mA2 6.2645633 353 / 66 conP: 0.012 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG1090h cluster01 -> 1e1aA0 5.4244747 312 / 66 conP: 0.015 CATH-ID: 2.130.10.50 Diisopropylfluorophosphatase. Chain: a. Synonym: dfpase. Engineered: y VNG1090h cluster02 -> 1jfrA0 5.4244747 260 / 66 conP: 0.026 CATH-ID: 3.40.50.950 Lipase. Chain: a, b. Engineered: yes VNG1090h cluster03 -> 1bebA0 5.6388762 156 / 66 conP: 0.078 CATH-ID: 2.40.128.20 Beta-lactoglobulin. Chain: a, b. Biological_unit: predominantly dimeri VNG1090h cluster04 -> 1ctt01 5.4244747 151 / 66 conP: 0.077 CATH-ID: 3.40.140.10 Cytidine deaminase (cda) complexed with 3,4-dihydrozebularine (dhz) VNG1090h cluster06 -> 1dqaA3 7.4414752 117 / 66 conP: 0.177 CATH-ID: 3.30.70.420 Hmg-coa reductase. Chain: a, b, c, d. Fragment: catalytic portion. Eng --end-- VNG10930 one-of-top-five-correct: 0.269863132273981 CThresh: 7.568516 25 best_is: cluster08 VNG10930 cluster00 -> 1akhB0 5.0955060 78 / 128 conP: 0.214 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG10930 cluster01 -> 1tc3C0 5.5918559 51 / 128 conP: 0.267 CATH-ID: 1.10.10.60 DNA. Chain: a, b. Engineered: yes. Tc3 transposase. Chain: c. Fragment VNG10930 cluster02 -> 1fokA1 5.7624244 281 / 128 conP: 0.098 CATH-ID: 3.90.241.10 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG10930 cluster03 -> 1abrA2 4.8950044 85 / 128 conP: 0.198 CATH-ID: 4.10.470.10 Abrin-a complexed with two sugar chains VNG10930 cluster04 -> 1b37A2 6.2279727 218 / 128 conP: 0.149 CATH-ID: 3.90.660.10 Polyamine oxidase. Chain: a, b, c. Fragment: fad-binding domain. Ec: 1 VNG10930 cluster08 -> 1d2mA3 7.0909607 177 / 128 conP: 0.220 CATH-ID: 3.40.50.300 Excinuclease abc subunit b. Chain: a. Synonym: uvrb. Engineered: yes --end-- VNG10931 one-of-top-five-correct: 0.466841190295697 CThresh: 7.157166 25 best_is: cluster15 VNG10931 cluster00 -> 1fadA0 6.3387906 95 / 118 conP: 0.258 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG10931 cluster01 -> 1iow01 5.8359661 84 / 118 conP: 0.243 CATH-ID: 3.40.50.20 D-ala\:d-ala ligase. Chain: null. Synonym: dd-ligase, ddlb. Engineered VNG10931 cluster02 -> 1epmE2 4.2977701 149 / 118 conP: 0.123 CATH-ID: 2.40.70.10 Endothia aspartic proteinase (endothiapepsin) complexed with ps2 (thr VNG10931 cluster03 -> 1htjF 5.4259216 178 / 118 conP: 0.141 NO-CATH VNG10931 cluster04 -> 1atiA2 6.8224278 113 / 118 conP: 0.265 CATH-ID: 3.40.50.800 Glycyl-tRNA synthetase. Chain: a, b. Synonym: glycine-tRNA ligase. Oth VNG10931 cluster15 -> 1b1cA0 9.4932243 166 / 118 conP: 0.362 CATH-ID: 3.40.50.360 NADPH-cytochrome p450 reductase. Chain: a. Fragment: fmn-binding domai --end-- VNG10941 one-of-top-five-correct: 0.372378378288726 CThresh: 7.186300 25 best_is: cluster04 VNG10941 cluster00 -> 1d1dA2 7.2060966 80 / 100 conP: 0.283 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG10941 cluster01 -> 1acf00 6.7818088 125 / 100 conP: 0.203 CATH-ID: 3.30.450.30 Profilin i VNG10941 cluster02 -> 1ci8A 5.5001686 377 / 100 conP: 0.029 NO-CATH VNG10941 cluster03 -> 2blmA 6.2044939 260 / 100 conP: 0.077 NO-CATH VNG10941 cluster04 -> 1reqA2 8.8508538 164 / 100 conP: 0.261 CATH-ID: 3.40.50.280 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de --end-- VNG1095h one-of-top-five-correct: 0.347902875718342 CThresh: 4.634628 75 best_is: cluster00 VNG1095h cluster00 -> 1mun02 8.2680718 112 / 62 conP: 0.267 CATH-ID: 1.10.340.10 Adenine glycosylase. Chain: null. Fragment: catalytic domain. Engineer VNG1095h cluster01 -> 1ed5A3 7.5394498 89 / 62 conP: 0.277 CATH-ID: 1.10.1010.10 Nitric oxide synthase. Chain: a, b. Fragment: heme domain (residues 39 VNG1095h cluster02 -> 1e7aA4 6.5760276 86 / 62 conP: 0.231 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1095h cluster03 -> 1cy5A0 7.7579224 92 / 62 conP: 0.283 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re VNG1095h cluster04 -> 1ad201 6.8840319 121 / 62 conP: 0.181 CATH-ID: 3.30.190.20 Ribosomal protein l1. Chain: null. Synonym: tl2. Engineered: yes. Muta --end-- VNG1096h one-of-top-five-correct: 0.346792347264244 CThresh: 3.677389 75 best_is: cluster18 VNG1096h cluster00 -> 1copD0 5.3202155 66 / 101 conP: 0.361 CATH-ID: 3.30.240.10 Cro repressor. Chain: d, e. Engineered: yes VNG1096h cluster01 -> 1tys00 6.2943279 264 / 101 conP: 0.159 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG1096h cluster02 -> 1jciA 6.5555915 294 / 101 conP: 0.142 NO-CATH VNG1096h cluster03 -> 1yrnA0 5.3130975 49 / 101 conP: 0.388 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG1096h cluster04 -> 1hvxA 6.7440446 483 / 101 conP: 0.045 NO-CATH VNG1096h cluster18 -> 1dosA0 6.9324978 358 / 101 conP: 0.106 CATH-ID: 3.20.20.170 Aldolase class ii. Chain: a, b. Engineered: yes --end-- VNG1110c one-of-top-five-correct: 0.260534025581678 CThresh: 4.336488 75 best_is: cluster00 VNG1110c cluster00 -> 1lehA1 6.8831284 151 / 67 conP: 0.165 CATH-ID: 3.40.192.10 Leucine dehydrogenase. Chain: a, b. Biological_unit: octamer VNG1110c cluster01 -> 1bcrB 5.7944909 146 / 67 conP: 0.132 NO-CATH VNG1110c cluster02 -> 1acf00 5.2868738 125 / 67 conP: 0.141 CATH-ID: 3.30.450.30 Profilin i VNG1110c cluster03 -> 1mb100 6.7652840 98 / 67 conP: 0.250 CATH-ID: 3.10.260.10 Mlu1-box binding protein. Chain: null. Fragment: DNA-binding domain. S VNG1110c cluster04 -> 1apyB0 5.0806935 141 / 67 conP: 0.115 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa --end-- VNG1112h one-of-top-five-correct: 0.172614220643922 CThresh: 10.316276 25 best_is: cluster00 VNG1112h cluster00 -> 1f8dA0 6.6121084 385 / 135 conP: 0.047 CATH-ID: 2.120.10.10 Neuraminidase. Chain: a. Fragment: integral membrane protein, membrane VNG1112h cluster01 -> 1ia8A 3.6553082 272 / 135 conP: 0.037 NO-CATH VNG1112h cluster02 -> 1ehs00 4.5591387 48 / 135 conP: 0.136 CATH-ID: 1.20.10.10 Heat-stable enterotoxin b. Chain: null. Synonym: stb. Engineered: yes VNG1112h cluster03 -> 1k5hA 4.5978799 398 / 135 conP: 0.025 NO-CATH VNG1112h cluster04 -> 1eumA0 6.1079050 161 / 135 conP: 0.120 CATH-ID: 1.20.120.190 Ferritin 1. Chain: a, b, c, d, e, f. Engineered: yes --end-- VNG1115h one-of-top-five-correct: 0.179661195185564 CThresh: 9.585567 25 best_is: cluster08 VNG1115h cluster00 -> 1eif01 4.3458940 68 / 123 conP: 0.123 CATH-ID: 2.30.30.80 Eukaryotic translation initiation factor 5a. Chain: null. Engineered: VNG1115h cluster01 -> 1ijiA 5.1512674 354 / 123 conP: 0.033 NO-CATH VNG1115h cluster02 -> 1svpA2 4.4817321 86 / 123 conP: 0.116 CATH-ID: 2.40.10.10 Sindbis virus capsid protein. Chain: a, b. Fragment: met 106 - ala 264 VNG1115h cluster03 -> 1gz9A 4.8711055 239 / 123 conP: 0.058 NO-CATH VNG1115h cluster04 -> 1a8d02 4.5696671 206 / 123 conP: 0.064 CATH-ID: 2.80.10.50 Tetanus neurotoxin. Chain: null. Fragment: c-fragment. Engineered: yes VNG1115h cluster08 -> 1qd6C0 6.6869250 240 / 123 conP: 0.094 CATH-ID: 2.40.230.10 Outer membrane phospholipase (ompla). Chain: a, b. Fragment: resdiues --end-- VNG11170 one-of-top-five-correct: 0.310229026370071 CThresh: 6.173444 75 best_is: cluster11 VNG11170 cluster00 -> 1uag02 3.9665859 196 / 89 conP: 0.063 CATH-ID: 3.90.77.10 Udp-n-acetylmuramoyl-l-alanine/:d-glutamate ligase. Chain: null. Synon VNG11170 cluster01 -> 1b0pA2 6.0396648 157 / 89 conP: 0.143 CATH-ID: 3.40.50.920 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG11170 cluster02 -> 1ll2A 5.7292526 255 / 89 conP: 0.066 NO-CATH VNG11170 cluster03 -> 1jlaA 4.7499933 546 / 89 conP: 0.005 NO-CATH VNG11170 cluster04 -> 1a8p02 6.5126601 162 / 89 conP: 0.156 CATH-ID: 3.40.50.80 Nadph\:ferredoxin oxidoreductase. Chain: null. Synonym: ferredoxin red VNG11170 cluster11 -> 3ecaA2 7.8836231 114 / 89 conP: 0.286 CATH-ID: 3.40.50.40 Asparaginase type ii (eca) --end-- VNG1119h one-of-top-five-correct: 0.314329707326046 CThresh: 6.455017 75 best_is: cluster04 VNG1119h cluster00 -> 1dik01 6.7358675 153 / 82 conP: 0.146 CATH-ID: 2.30.35.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG1119h cluster01 -> 1otgA0 7.3272886 125 / 82 conP: 0.204 CATH-ID: 3.30.457.20 5-carboxymethyl-2-hydroxymuconate isomerase. Chain: a, b, c. Engineere VNG1119h cluster02 -> 1ad600 6.7358675 185 / 82 conP: 0.115 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG1119h cluster03 -> 1e7aA3 6.8410478 92 / 82 conP: 0.228 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1119h cluster04 -> 1jud02 8.2229842 75 / 82 conP: 0.338 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG1130h one-of-top-five-correct: 0.479503972701321 CThresh: 3.816427 75 best_is: cluster00 VNG1130h cluster00 -> 1dg3A1 9.1419007 300 / 73 conP: 0.108 CATH-ID: 1.20.1000.10 Interferon-induced guanylate-binding protein 1. Chain: a. Fragment: fu VNG1130h cluster01 -> 1chuA3 8.9339223 102 / 73 conP: 0.432 CATH-ID: 1.20.1040.60 L-aspartate oxidase. Chain: a. Engineered: yes. Biological_unit: homod VNG1130h cluster02 -> 1il0A 7.4780739 291 / 73 conP: 0.076 NO-CATH VNG1130h cluster03 -> 1k5hA 8.1887157 398 / 73 conP: 0.035 NO-CATH VNG1130h cluster04 -> 1dkxA2 8.8827867 80 / 73 conP: 0.481 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su --end-- VNG11310 one-of-top-five-correct: 0.529431581767511 CThresh: 4.427846 75 best_is: cluster10 VNG11310 cluster00 -> 1gca02 7.6605882 161 / 83 conP: 0.252 CATH-ID: 3.40.50.2500 Glucose/galactose-binding protein complex with galactose VNG11310 cluster01 -> 1fjgC1 8.9947861 91 / 83 conP: 0.472 CATH-TRUNC VNG11310 cluster02 -> 1bhmA0 5.9023029 198 / 83 conP: 0.129 CATH-ID: 3.40.91.20 Endonuclease bamhi. Chain: a, b. Synonym: r. Bamhi. Engineered: yes. D VNG11310 cluster03 -> 1onrA0 8.1028263 316 / 83 conP: 0.094 CATH-ID: 3.20.20.70 Transaldolase b. Chain: a, b. Engineered: yes VNG11310 cluster04 -> 1dik04 6.9634671 343 / 83 conP: 0.056 CATH-ID: 3.20.20.60 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG11310 cluster10 -> 1ap800 9.7387001 213 / 83 conP: 0.283 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes --end-- VNG11441 one-of-top-five-correct: 0.177780523783169 CThresh: 8.394017 25 best_is: cluster05 VNG11441 cluster00 -> 1ad201 4.6238973 121 / 116 conP: 0.118 CATH-ID: 3.30.190.20 Ribosomal protein l1. Chain: null. Synonym: tl2. Engineered: yes. Muta VNG11441 cluster01 -> 1cjcA2 4.1017371 241 / 116 conP: 0.053 CATH-ID: 3.50.50.60 Adrenodoxin reductase. Chain: a. Synonym: adr, nadph: adrenodoxin oxid VNG11441 cluster02 -> 1a36A4 5.4463634 96 / 116 conP: 0.165 CATH-ID: 1.10.132.10 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG11441 cluster03 -> 1b93A0 6.0028032 148 / 116 conP: 0.145 CATH-ID: 3.40.50.1380 Methylglyoxal synthase. Chain: a, b, c. Engineered: yes VNG11441 cluster04 -> 1moq01 4.2017832 218 / 116 conP: 0.062 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG11441 cluster05 -> 1itg00 6.2708611 142 / 116 conP: 0.160 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant --end-- VNG1151h one-of-top-five-correct: 0.430029449276571 CThresh: 4.202950 75 best_is: cluster09 VNG1151h cluster00 -> 1qhaA2 7.5192609 261 / 72 conP: 0.088 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG1151h cluster01 -> 1di1A0 5.8484850 290 / 72 conP: 0.043 CATH-ID: 1.10.615.10 Aristolochene synthase. Chain: a, b. Synonym: sesquiterpene cyclase, a VNG1151h cluster02 -> 1csc02 7.7281079 112 / 72 conP: 0.305 CATH-ID: 1.10.230.10 Citrate synthase l-malate - carboxymethyl coenzyme A complex VNG1151h cluster03 -> 1jf7A 6.7834405 281 / 72 conP: 0.061 NO-CATH VNG1151h cluster04 -> 1jp6A 8.3546489 152 / 72 conP: 0.263 NO-CATH VNG1151h cluster09 -> 1bmtA1 8.7932697 87 / 72 conP: 0.432 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) --end-- VNG11530 one-of-top-five-correct: 0.599531687732984 CThresh: 2.579040 100 best_is: cluster15 VNG11530 cluster00 -> 1ptvA0 7.0641289 297 / 84 conP: 0.124 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase 1b. Chain: a. Engineered: yes. Mutation: VNG11530 cluster01 -> 1flp00 6.0952692 142 / 84 conP: 0.281 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG11530 cluster02 -> 1cb5A 9.4601439 453 / 84 conP: 0.072 NO-CATH VNG11530 cluster03 -> 2cb5A 7.8655688 453 / 84 conP: 0.046 NO-CATH VNG11530 cluster04 -> 1il0A 6.2709937 291 / 84 conP: 0.106 NO-CATH VNG11530 cluster15 -> 1il600 9.6594658 166 / 84 conP: 0.472 CATH-ID: 1.20.120.200 Interleukin-6. Chain: null --end-- VNG11620 one-of-top-five-correct: 0.281010116088492 CThresh: 8.550364 25 best_is: cluster13 VNG11620 cluster00 -> 1bl0A1 5.1453265 56 / 119 conP: 0.187 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG11620 cluster01 -> 1yrnA0 6.1570570 49 / 119 conP: 0.242 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG11620 cluster02 -> 1efuB2 5.1608059 86 / 119 conP: 0.162 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran VNG11620 cluster03 -> 1ef4A0 5.6000706 55 / 119 conP: 0.208 CATH-ID: 1.10.10.60 DNA-directed RNA polymerase. Chain: a. Fragment: subunit rpb10. Synony VNG11620 cluster04 -> 1e7aA4 5.8138123 86 / 119 conP: 0.189 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG11620 cluster13 -> 1aa7A2 7.8940941 78 / 119 conP: 0.308 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer --end-- VNG1169c one-of-top-five-correct: 0.35004933211946 CThresh: 6.814027 75 best_is: cluster06 VNG1169c cluster00 -> 1ngr00 6.5476994 85 / 118 conP: 0.298 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d VNG1169c cluster01 -> 1cei00 6.8358925 85 / 118 conP: 0.316 CATH-ID: 1.10.1200.20 Colicin e7 immunity protein. Chain: null. Synonym: imme7 VNG1169c cluster02 -> 1bvsA3 5.9527819 44 / 118 conP: 0.313 CATH-ID: 1.10.8.10 Ruva. Chain: a, b, c, d, e, f, g, h. Engineered: yes. Biological_unit: VNG1169c cluster03 -> 1mroA3 8.0071736 227 / 118 conP: 0.218 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG1169c cluster04 -> 1bob03 5.1957451 54 / 118 conP: 0.257 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG1169c cluster06 -> 1cii03 8.0071736 157 / 118 conP: 0.297 CATH-ID: 1.10.490.30 Colicin ia. Chain: null. Engineered: yes. Biological_unit: monomer --end-- VNG11740 one-of-top-five-correct: 0.8067046649068 CThresh: 4.781370 75 best_is: cluster02 VNG11740 cluster00 -> 1k40A 10.278230 126 / 99 conP: 0.540 NO-CATH VNG11740 cluster01 -> 1qsdA0 10.284757 102 / 99 conP: 0.583 CATH-ID: 1.20.1040.50 Beta-tubulin binding post-chaperonin cofactor. Chain: a, b. Fragment: VNG11740 cluster02 -> 1qkrA0 13.123304 172 / 99 conP: 0.659 CATH-ID: 1.20.120.230 Vinculin. Chain: a, b. Fragment: c-terminal domain. Synonym: tail doma VNG11740 cluster03 -> 1a36A5 10.025425 72 / 99 conP: 0.616 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG11740 cluster04 -> 1k40A 10.278230 126 / 99 conP: 0.540 NO-CATH --end-- VNG11741 one-of-top-five-correct: 0.479574794108659 CThresh: 6.990884 37 best_is: cluster00 VNG11741 cluster00 -> 1jgjA0 8.9656286 217 / 144 conP: 0.360 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG11741 cluster01 -> 1fsz01 5.6735053 212 / 144 conP: 0.183 CATH-ID: 3.40.50.1440 Ftsz. Chain: null. Synonym: sulb. Engineered: yes VNG11741 cluster02 -> 1kmeA 6.9997371 227 / 144 conP: 0.233 NO-CATH VNG11741 cluster03 -> 1derA1 6.3234603 250 / 144 conP: 0.183 CATH-ID: 1.10.560.10 Groel. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n. Engineered: ye VNG11741 cluster04 -> 1jfgA 6.1052995 354 / 144 conP: 0.113 NO-CATH --end-- VNG11750 one-of-top-five-correct: 0.318992914407263 CThresh: 4.553171 75 best_is: cluster14 VNG11750 cluster00 -> 1bl0A1 7.1725275 56 / 70 conP: 0.366 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG11750 cluster01 -> 1qqeA0 6.6500902 281 / 70 conP: 0.050 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG11750 cluster02 -> 1c9bA2 5.9189987 106 / 70 conP: 0.196 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG11750 cluster03 -> 1qckA0 5.3989368 89 / 70 conP: 0.199 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG11750 cluster04 -> 1idy00 6.3667687 54 / 70 conP: 0.318 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG11750 cluster14 -> 1d8jA0 7.6927181 81 / 70 conP: 0.343 CATH-ID: 1.10.10.10 General transcription factor tfiie-beta. Chain: a. Fragment: central c --end-- VNG11752 one-of-top-five-correct: 0.293779738204852 CThresh: 7.264566 25 best_is: cluster03 VNG11752 cluster00 -> 1ei5A2 4.2618144 82 / 99 conP: 0.139 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG11752 cluster01 -> 1a0dA0 6.9890646 437 / 99 conP: 0.028 CATH-ID: 3.20.20.150 Xylose isomerase. Chain: a, b, c, d. Synonym: glucose isomerase. Biolo VNG11752 cluster02 -> 1tys00 7.1411404 264 / 99 conP: 0.093 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG11752 cluster03 -> 1e79E2 7.9370929 276 / 99 conP: 0.106 CATH-ID: 3.40.50.300 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG11752 cluster04 -> 1svb02 4.8329427 83 / 99 conP: 0.159 CATH-ID: 3.30.67.10 Tick-borne encephalitis virus glycoprotein. Chain: null --end-- VNG11753 one-of-top-five-correct: 0.915238606408475 CThresh: 2.372369 100 best_is: cluster02 VNG11753 cluster00 -> 1k40A 14.297104 126 / 97 conP: 0.862 NO-CATH VNG11753 cluster01 -> 1k40A 14.106315 126 / 97 conP: 0.855 NO-CATH VNG11753 cluster02 -> 1k40A 14.678681 126 / 97 conP: 0.875 NO-CATH VNG11753 cluster03 -> 1fftC0 12.389219 185 / 97 conP: 0.702 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG11753 cluster04 -> 1k04A 14.106315 142 / 97 conP: 0.841 NO-CATH --end-- VNG1178h one-of-top-five-correct: 0.416625182106648 CThresh: 5.247011 75 best_is: cluster14 VNG1178h cluster00 -> 3ygsP0 6.9852711 97 / 75 conP: 0.255 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: c. Fragment: caspase re VNG1178h cluster01 -> 1fjgT0 8.8418408 99 / 75 conP: 0.365 CATH-TRUNC VNG1178h cluster02 -> 1chkA2 7.6696308 95 / 75 conP: 0.298 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG1178h cluster03 -> 1fjgT0 7.0841152 99 / 75 conP: 0.257 CATH-TRUNC VNG1178h cluster04 -> 1e5rA 7.1915566 260 / 75 conP: 0.074 NO-CATH VNG1178h cluster14 -> 1jwfA 9.0481263 139 / 75 conP: 0.296 NO-CATH --end-- VNG1183h one-of-top-five-correct: 0.235164972284038 CThresh: 6.915138 75 best_is: cluster16 VNG1183h cluster00 -> 1onrA0 5.9327293 316 / 82 conP: 0.029 CATH-ID: 3.20.20.70 Transaldolase b. Chain: a, b. Engineered: yes VNG1183h cluster01 -> 1a4mA0 6.5350830 349 / 82 conP: 0.026 CATH-ID: 3.20.20.140 Adenosine deaminase. Chain: a, b, c, d. Synonym: ada. Engineered: yes VNG1183h cluster02 -> 1jkw01 7.1374366 176 / 82 conP: 0.124 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG1183h cluster03 -> 1rlr02 6.9394743 105 / 82 conP: 0.197 CATH-ID: 1.10.395.10 Ribonucleotide reductase protein r1. Chain: null. Synonym: ribonucleos VNG1183h cluster04 -> 1pbv01 5.9756554 82 / 82 conP: 0.185 CATH-ID: 1.10.220.20 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: VNG1183h cluster16 -> 1fadA0 7.3382212 95 / 82 conP: 0.231 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi --end-- VNG11841 one-of-top-five-correct: 0.154862533264601 CThresh: 8.097766 25 best_is: cluster18 VNG11841 cluster00 -> 1aj600 5.4973886 194 / 106 conP: 0.090 CATH-ID: 3.30.565.10 Gyrase. Chain: null. Fragment: n-terminal 24 kda. Engineered: yes. Mut VNG11841 cluster01 -> 1d5tA1 3.7655815 105 / 106 conP: 0.098 CATH-ID: 1.10.405.10 Guanine nucleotide dissociation inhibitor. Chain: a. Engineered: yes VNG11841 cluster02 -> 1fezA2 4.7543427 78 / 106 conP: 0.147 CATH-ID: 1.10.164.20 Phosphonoacetaldehyde hydrolase. Chain: a, b, c, d. Engineered: yes VNG11841 cluster03 -> 1din00 4.3961417 233 / 106 conP: 0.053 CATH-ID: 3.40.50.950 Dienelactone hydrolase. Chain: null. Synonym: dlh. Engineered: yes VNG11841 cluster04 -> 1qspA0 3.9041726 165 / 106 conP: 0.071 CATH-ID: 1.20.120.160 Ypd1. Chain: a, b. Engineered: yes. Biological_unit: monomer VNG11841 cluster18 -> 4fxc00 5.9111351 98 / 106 conP: 0.174 CATH-ID: 3.10.20.30 Ferredoxin. Chain: null --end-- VNG1189h one-of-top-five-correct: 0.219223824139005 CThresh: 9.336906 25 best_is: cluster05 VNG1189h cluster00 -> 1i30A 4.9863470 248 / 131 conP: 0.069 NO-CATH VNG1189h cluster01 -> 1qd6C0 6.0537567 240 / 131 conP: 0.095 CATH-ID: 2.40.230.10 Outer membrane phospholipase (ompla). Chain: a, b. Fragment: resdiues VNG1189h cluster02 -> 1f6yA0 5.3075570 258 / 131 conP: 0.071 CATH-ID: 3.20.20.20 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransfera VNG1189h cluster03 -> 1kjzA 5.8922179 400 / 131 conP: 0.041 NO-CATH VNG1189h cluster04 -> 1gkoA 6.8096962 115 / 131 conP: 0.202 NO-CATH VNG1189h cluster05 -> 1avaA2 7.0721368 58 / 131 conP: 0.270 CATH-ID: 2.60.40.1180 Barley alpha-amylase 2(cv menuet). Chain: a, b. Synonym: amy2. Enginee --end-- VNG1194h one-of-top-five-correct: 0.259482988848848 CThresh: 5.265536 75 best_is: cluster16 VNG1194h cluster00 -> 1aorA2 5.3544058 186 / 68 conP: 0.069 CATH-ID: 1.10.569.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri VNG1194h cluster01 -> 1inp03 5.7793682 166 / 68 conP: 0.093 CATH-ID: 3.40.191.10 Inositol polyphosphate 1-phosphatase (1-ptase) (inositol-1,4-bisphosph VNG1194h cluster02 -> 1bcpB2 4.5044811 110 / 68 conP: 0.113 CATH-ID: 2.40.50.110 Pertussis toxin. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Ec: 2.4.2. VNG1194h cluster03 -> 1rfs00 6.2043306 127 / 68 conP: 0.148 CATH-ID: 2.102.10.10 Rieske protein. Chain: null. Fragment: soluble fragment, c-terminal re VNG1194h cluster04 -> 1g6gA0 5.9918494 127 / 68 conP: 0.141 CATH-ID: 2.60.200.20 Protein kinase rad53. Chain: a, b. Fragment: n-terminal domain (includ VNG1194h cluster16 -> 1e8tA 7.2667366 446 / 68 conP: 0.009 NO-CATH --end-- VNG1196h one-of-top-five-correct: 0.118206161341951 CThresh: 3.811013 75 best_is: cluster01 VNG1196h cluster00 -> 1by5A1 3.7751484 143 / 35 conP: 0.020 CATH-ID: 2.170.130.10 Ferric hydroxamate uptake protein. Chain: a. Synonym: fhua. Ferrichrom VNG1196h cluster01 -> 1fdx00 4.7280758 54 / 35 conP: 0.137 CATH-ID: 3.30.70.20 Ferredoxin VNG1196h cluster02 -> 1bor00 4.2104088 56 / 35 conP: 0.116 CATH-ID: 3.30.40.10 Transcription factor pml. Chain: null. Fragment: ring finger domain, r VNG1196h cluster03 -> 1h70A0 3.9515753 255 / 35 conP: 0.002 CATH-ID: 3.75.10.10 Ng,ng-dimethylarginine dimethylaminohydrolase. Chain: a. Engineered: y VNG1196h cluster04 -> 1b71A2 3.6927418 45 / 35 conP: 0.123 CATH-ID: 2.20.28.10 Rubrerythrin. Chain: a --end-- VNG1200h one-of-top-five-correct: 0.302261254950468 CThresh: 4.971610 75 best_is: cluster11 VNG1200h cluster00 -> 1abv00 6.6696961 105 / 67 conP: 0.207 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi VNG1200h cluster01 -> 1goiA 6.6696961 496 / 67 conP: 0.004 NO-CATH VNG1200h cluster02 -> 1fafA0 6.7652840 79 / 67 conP: 0.260 CATH-ID: 1.20.15.80 Large t antigen. Chain: a. Fragment: n-terminal domain. Engineered: ye VNG1200h cluster03 -> 1cf7B0 6.7343530 82 / 67 conP: 0.252 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG1200h cluster04 -> 1cozA0 4.6532694 126 / 67 conP: 0.105 CATH-ID: 3.40.50.620 Glycerol-3-phosphate cytidylyltransferase. Chain: a, b. Engineered: ye VNG1200h cluster11 -> 1xib00 7.7368575 388 / 67 conP: 0.018 CATH-ID: 3.20.20.150 D-xylose isomerase (ph 7.4) --end-- VNG12070 one-of-top-five-correct: 0.449530043769268 CThresh: 2.320929 100 best_is: cluster00 VNG12070 cluster00 -> 1avpA0 8.3613961 204 / 63 conP: 0.189 CATH-ID: 3.40.395.10 Adenoviral proteinase. Chain: a. Fragment: main. Synonym: avp. Enginee VNG12070 cluster01 -> 1c8zA0 7.0568501 265 / 63 conP: 0.075 CATH-ID: 3.20.90.10 Tubby protein. Chain: a. Engineered: yes VNG12070 cluster02 -> 1znbA0 7.7091231 228 / 63 conP: 0.129 CATH-ID: 3.60.15.10 Metallo-beta-lactamase. Chain: a, b. Synonym: class b beta-lactamase. VNG12070 cluster03 -> 1avpA0 8.1439717 204 / 63 conP: 0.180 CATH-ID: 3.40.395.10 Adenoviral proteinase. Chain: a. Fragment: main. Synonym: avp. Enginee VNG12070 cluster04 -> 1avpA0 6.6220014 204 / 63 conP: 0.124 CATH-ID: 3.40.395.10 Adenoviral proteinase. Chain: a. Fragment: main. Synonym: avp. Enginee --end-- VNG12130 one-of-top-five-correct: 0.222790084762175 CThresh: 6.392744 75 best_is: cluster05 VNG12130 cluster00 -> 1a5t03 6.5507375 116 / 70 conP: 0.149 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG12130 cluster01 -> 1eyvA0 5.6074624 131 / 70 conP: 0.103 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr VNG12130 cluster02 -> 1qqeA0 4.8656881 281 / 70 conP: 0.020 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG12130 cluster03 -> 1hx0A 4.6550570 495 / 70 conP: 0.002 NO-CATH VNG12130 cluster04 -> 1bl0A2 5.0980557 60 / 70 conP: 0.168 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG12130 cluster05 -> 1aisB1 7.1826310 99 / 70 conP: 0.199 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t --end-- VNG1220h one-of-top-five-correct: 0.347038540070592 CThresh: 6.971843 29 best_is: cluster06 VNG1220h cluster00 -> 1lbkA 6.4258660 208 / 106 conP: 0.133 NO-CATH VNG1220h cluster01 -> 1idy00 6.0827801 54 / 106 conP: 0.277 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG1220h cluster02 -> 1mbe00 5.6476405 52 / 106 conP: 0.255 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG1220h cluster03 -> 1fjgB2 5.8920555 62 / 106 conP: 0.256 CATH-TRUNC VNG1220h cluster04 -> 1elkA0 5.6703357 153 / 106 conP: 0.150 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG1220h cluster06 -> 1nhp02 8.3156898 150 / 106 conP: 0.279 CATH-ID: 3.50.50.60 Nadh peroxidase (npx) mutant with cys 42 replaced by ala (c42a) --end-- VNG1226h one-of-top-five-correct: 0.316728213125972 CThresh: 5.617383 75 best_is: cluster22 VNG1226h cluster00 -> 1quvA2 6.9591051 119 / 65 conP: 0.167 CATH-ID: 3.30.70.620 RNA-directed RNA polymerase. Chain: a. Fragment: residues 2420-2989. S VNG1226h cluster01 -> 1uox00 6.1067133 295 / 65 conP: 0.023 CATH-ID: 3.10.270.10 Urate oxidase. Chain: null. Synonym: uricase. Biological_unit: tetrame VNG1226h cluster02 -> 1f4iA0 6.1373296 45 / 65 conP: 0.260 CATH-ID: 1.10.8.10 Uv excision repair protein protein rad23 homolog a. Chain: a. Fragment VNG1226h cluster03 -> 1cfb02 5.1411157 106 / 65 conP: 0.120 CATH-ID: 2.60.40.30 Drosophila neuroglian (chymotryptic fragment containing the two amino VNG1226h cluster04 -> 1gsh02 6.3221028 105 / 65 conP: 0.163 CATH-ID: 3.30.470.20 Glutathione biosynthetic ligase. Chain: null. Synonym: glutathione syn VNG1226h cluster22 -> 1lxl00 8.2606079 221 / 65 conP: 0.089 CATH-ID: 1.10.437.10 Bcl-xl. Chain: null. Synonym: apoptosis regulator bcl-x. Engineered: y --end-- VNG1229h one-of-top-five-correct: 0.511255283430376 CThresh: 3.885650 75 best_is: cluster08 VNG1229h cluster00 -> 1i27A0 8.8040188 73 / 67 conP: 0.463 CATH-ID: 1.10.10.10 Transcription factor iif. Chain: a. Fragment: rap74 subunit, c-termina VNG1229h cluster01 -> 1ddf00 6.5540825 127 / 67 conP: 0.204 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG1229h cluster02 -> 1chkA2 8.3771543 95 / 67 conP: 0.377 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG1229h cluster03 -> 1opc00 7.9502897 99 / 67 conP: 0.339 CATH-ID: 1.10.10.10 Ompr. Chain: null. Fragment: c-terminal DNA-binding domain. Synonym: o VNG1229h cluster04 -> 1qsaA2 9.2997014 70 / 67 conP: 0.506 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG1229h cluster08 -> 1qsaA2 9.6577478 70 / 67 conP: 0.532 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein --end-- VNG12340 one-of-top-five-correct: 0.495572049092782 CThresh: 2.852511 100 best_is: cluster14 VNG12340 cluster00 -> 1mdl01 7.2981516 126 / 67 conP: 0.288 CATH-ID: 3.30.390.10 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r VNG12340 cluster01 -> 1a6s00 7.7368575 87 / 67 conP: 0.408 CATH-ID: 1.10.150.90 Gag polyprotein. Chain: null. Fragment: m-domain. Engineered: yes. Mut VNG12340 cluster02 -> 1a6s00 7.7368575 87 / 67 conP: 0.408 CATH-ID: 1.10.150.90 Gag polyprotein. Chain: null. Fragment: m-domain. Engineered: yes. Mut VNG12340 cluster03 -> 1dptA0 7.5234252 117 / 67 conP: 0.322 CATH-ID: 3.30.429.10 D-dopachrome tautomerase. Chain: a, b, c. Engineered: yes. Biological_ VNG12340 cluster04 -> 1rypD0 6.4562639 241 / 67 conP: 0.087 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG12340 cluster14 -> 1chmA2 9.0174511 246 / 67 conP: 0.159 CATH-ID: 3.90.230.10 Creatine amidinohydrolase --end-- VNG12351 one-of-top-five-correct: 0.513411513515413 CThresh: 2.433992 100 best_is: cluster15 VNG12351 cluster00 -> 1in4A 8.0792506 298 / 60 conP: 0.058 NO-CATH VNG12351 cluster01 -> 1a5t03 5.8729035 116 / 60 conP: 0.213 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG12351 cluster02 -> 1ej5A0 7.6379812 107 / 60 conP: 0.334 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG12351 cluster03 -> 1frvB0 5.2109993 530 / 60 conP: 0.002 CATH-ID: 1.10.645.10 Hydrogenase. Chain: a, b, c, d. Synonym: cytochrome-c3 hydrogenase. Ec VNG12351 cluster04 -> 1fnnA1 6.5348076 101 / 60 conP: 0.281 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG12351 cluster15 -> 1in4A 9.1824242 298 / 60 conP: 0.078 NO-CATH --end-- VNG1238c one-of-top-five-correct: 0.38490653229313 CThresh: 5.173556 75 best_is: cluster19 VNG1238c cluster00 -> 1bu2A1 6.6736057 112 / 72 conP: 0.206 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG1238c cluster01 -> 1bu2A1 6.8783860 112 / 72 conP: 0.216 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG1238c cluster02 -> 1bu2A2 6.9364865 102 / 72 conP: 0.236 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG1238c cluster03 -> 1jse00 7.1970769 129 / 72 conP: 0.204 CATH-ID: 1.10.530.10 Lysozyme. Chain: null. Ec: 3.2.1.17 VNG1238c cluster04 -> 1bgvA1 6.0573320 167 / 72 conP: 0.113 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer VNG1238c cluster19 -> 1ahjB1 8.7214087 110 / 72 conP: 0.323 CATH-ID: 1.10.472.20 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het --end-- VNG1239h one-of-top-five-correct: 0.147369232543492 CThresh: 3.720324 75 best_is: cluster02 VNG1239h cluster00 -> 1dm9A0 4.3036319 104 / 38 conP: 0.059 CATH-ID: 3.10.290.10 Hypothetical 15.5 kd protein in mrca-pcka intergenic region. Chain: a, VNG1239h cluster01 -> 1dqwA0 5.0616836 267 / 38 conP: 0.004 CATH-ID: 3.20.20.90 Orotidine 5'-phosphate decarboxylase. Chain: a, b, c, d. Engineered: y VNG1239h cluster02 -> 1gmwA 5.3143675 134 / 38 conP: 0.046 NO-CATH VNG1239h cluster03 -> 1koe00 4.5563158 172 / 38 conP: 0.019 CATH-ID: 3.10.100.10 Endostatin. Chain: null. Fragment: c-terminal 184 residues of alpha1 c VNG1239h cluster04 -> 1bgvA1 4.3036319 167 / 38 conP: 0.019 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer --end-- VNG12401 one-of-top-five-correct: 0.320906654156218 CThresh: 2.346244 100 best_is: cluster05 VNG12401 cluster00 -> 1gsh02 5.2711684 105 / 53 conP: 0.176 CATH-ID: 3.30.470.20 Glutathione biosynthetic ligase. Chain: null. Synonym: glutathione syn VNG12401 cluster01 -> 1geo01 6.1870985 166 / 53 conP: 0.111 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG12401 cluster02 -> 1fc2C0 4.7866674 43 / 53 conP: 0.297 CATH-ID: 4.10.310.10 Immunoglobulin fc and fragment b of protein a complex VNG12401 cluster03 -> 1aa7A1 6.1870985 79 / 53 conP: 0.282 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG12401 cluster04 -> 1aua02 6.4160811 83 / 53 conP: 0.285 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG12401 cluster05 -> 1gsh02 7.1030287 105 / 53 conP: 0.267 CATH-ID: 3.30.470.20 Glutathione biosynthetic ligase. Chain: null. Synonym: glutathione syn --end-- VNG12403 one-of-top-five-correct: 0.283404344903664 CThresh: 6.923411 75 best_is: cluster13 VNG12403 cluster00 -> 1d7uA1 7.1853900 141 / 90 conP: 0.185 CATH-ID: 3.30.70.160 2,2-dialkylglycine decarboxylase (pyruvate). Chain: a. Synonym: dgd. E VNG12403 cluster01 -> 1qmvA 5.2374469 195 / 90 conP: 0.079 NO-CATH VNG12403 cluster02 -> 1pdnC2 4.9598341 55 / 90 conP: 0.189 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b VNG12403 cluster03 -> 1b4uA0 5.7395523 132 / 90 conP: 0.139 CATH-ID: 1.10.700.10 Protocatechuate 4,5-dioxygenase. Chain: a, b, c, d. Fragment: chain a, VNG12403 cluster04 -> 1a8l02 4.8356590 106 / 90 conP: 0.132 CATH-ID: 3.40.30.10 Protein disulfide oxidoreductase. Chain: null. Engineered: yes VNG12403 cluster13 -> 1g6wA2 7.8489522 137 / 90 conP: 0.221 CATH-ID: 1.20.1050.10 Ure2 protein. Chain: a, b, c, d. Fragment: globular domain (residues 9 --end-- VNG12521 one-of-top-five-correct: 0.139603408153499 CThresh: 8.555860 25 best_is: cluster13 VNG12521 cluster00 -> 1ihgA 4.2898072 364 / 111 conP: 0.023 NO-CATH VNG12521 cluster01 -> 1dozA1 5.6302598 166 / 111 conP: 0.109 CATH-ID: 3.40.50.1400 Ferrochelatase. Chain: a. Engineered: yes VNG12521 cluster02 -> 1hxn00 4.6008188 210 / 111 conP: 0.064 CATH-ID: 2.110.10.10 Hemopexin. Chain: null. Domain: c-terminal domain. Synonym: hpx. Heter VNG12521 cluster03 -> 1hocA1 4.3781968 181 / 111 conP: 0.072 CATH-ID: 3.30.500.10 Murine class i major histocompatibility complex consisting of h-2d==b= VNG12521 cluster04 -> 1qh5A0 5.2053069 260 / 111 conP: 0.056 CATH-ID: 3.60.15.10 Hydroxyacylglutathione hydrolase. Chain: a, b. Synonym: glyoxalase ii. VNG12521 cluster13 -> 9gafA2 5.6720738 143 / 111 conP: 0.125 CATH-ID: 3.50.11.10 Glycosylasparaginase. Chain: a, c. Synonym: glycoasparaginase,aspartyl --end-- VNG12550 one-of-top-five-correct: 0.338668311323577 CThresh: 5.010864 75 best_is: cluster00 VNG12550 cluster00 -> 2hmqA0 7.7572969 113 / 87 conP: 0.328 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG12550 cluster01 -> 1k94A 5.9824135 165 / 87 conP: 0.162 NO-CATH VNG12550 cluster02 -> 1cei00 6.6600673 85 / 87 conP: 0.308 CATH-ID: 1.10.1200.20 Colicin e7 immunity protein. Chain: null. Synonym: imme7 VNG12550 cluster03 -> 1cuk03 6.2100330 48 / 87 conP: 0.345 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes VNG12550 cluster04 -> 1hqvA0 5.4296628 178 / 87 conP: 0.129 CATH-ID: 1.10.238.10 Programmed cell death protein 6. Chain: a. Synonym: probable calcium-b --end-- VNG1257h one-of-top-five-correct: 0.450787706956926 CThresh: 5.000427 75 best_is: cluster09 VNG1257h cluster00 -> 2occC2 7.3613707 191 / 93 conP: 0.211 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG1257h cluster01 -> 1qojA0 5.9527819 44 / 93 conP: 0.351 CATH-ID: 4.10.860.10 Uvrb. Chain: a, b. Fragment: c-terminal domain VNG1257h cluster02 -> 1jqcA0 6.5883688 340 / 93 conP: 0.065 CATH-ID: 1.10.620.20 Protein r2 of ribonucleotide reductase. Chain: a, b. Synonym: ribonucl VNG1257h cluster03 -> 1ibrB0 6.5883688 458 / 93 conP: 0.028 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG1257h cluster04 -> 1aqt02 6.0271037 47 / 93 conP: 0.350 CATH-ID: 1.20.15.20 Atp synthase. Chain: null. Fragment: epsilon chain. Engineered: yes. M VNG1257h cluster09 -> 1cpq00 8.9073744 129 / 93 conP: 0.400 CATH-ID: 1.20.120.10 Cytochrome c'. Chain: null --end-- VNG1260c one-of-top-five-correct: 0.856789416823942 CThresh: 2.810764 100 best_is: cluster08 VNG1260c cluster00 -> 1fpoA 10.385473 171 / 93 conP: 0.550 NO-CATH VNG1260c cluster01 -> 1qqtA3 10.646629 138 / 93 conP: 0.628 CATH-ID: 1.10.730.10 Methionyl-tRNA synthetase. Chain: a. Fragment: truncated fragment, res VNG1260c cluster02 -> 1dlc01 11.226380 229 / 93 conP: 0.502 CATH-ID: 1.20.190.10 Delta-endotoxin cryiiia (bt13) VNG1260c cluster03 -> 1qdbA 11.565289 473 / 93 conP: 0.150 NO-CATH VNG1260c cluster04 -> 1k04A 10.066877 142 / 93 conP: 0.581 NO-CATH VNG1260c cluster08 -> 1ivhA3 13.352135 141 / 93 conP: 0.783 CATH-ID: 1.20.140.10 Isovaleryl-coa dehydrogenase. Chain: a, b, c, d. Engineered: yes. Biol --end-- VNG1261h one-of-top-five-correct: 0.340801865029467 CThresh: 5.352489 75 best_is: cluster03 VNG1261h cluster00 -> 1cuk02 5.3285763 76 / 59 conP: 0.157 CATH-ID: 1.10.150.30 Ruva protein. Chain: null. Engineered: yes VNG1261h cluster01 -> 2phy00 5.6930852 125 / 59 conP: 0.104 CATH-ID: 3.30.450.20 Photoactive yellow protein. Chain: null. Synonym: pyp VNG1261h cluster02 -> 2tct02 5.4713351 133 / 59 conP: 0.090 CATH-ID: 1.10.357.10 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG1261h cluster03 -> 1aisB1 8.5758367 99 / 59 conP: 0.266 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG1261h cluster04 -> 1eszA 4.8060847 260 / 59 conP: 0.018 NO-CATH --end-- VNG1263c one-of-top-five-correct: 0.630024103744724 CThresh: 3.839350 75 best_is: cluster18 VNG1263c cluster00 -> 1hgu00 6.0269793 186 / 79 conP: 0.149 CATH-ID: 1.20.120.200 Human growth hormone. Chain: null. Synonym: human somatotropin VNG1263c cluster01 -> 1a5t03 7.6997911 116 / 79 conP: 0.345 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG1263c cluster02 -> 1ash00 6.5421148 147 / 79 conP: 0.223 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG1263c cluster03 -> 1bgxT3 6.6361772 147 / 79 conP: 0.227 CATH-ID: 3.30.420.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG1263c cluster04 -> 1a5t03 6.7297135 116 / 79 conP: 0.285 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG1263c cluster18 -> 5eat02 10.697496 371 / 79 conP: 0.115 CATH-ID: 1.10.615.10 5-epi-aristolochene synthase. Chain: null. Synonym: 5-epi-aristolochen --end-- VNG1264c one-of-top-five-correct: 0.452066865940919 CThresh: 6.995389 27 best_is: cluster00 VNG1264c cluster00 -> 1dtwA0 9.0748279 382 / 126 conP: 0.150 CATH-ID: 3.40.50.970 Branched-chain alpha-keto acid dehydrogenase alpha subunit. Chain: a. VNG1264c cluster01 -> 1ejbA0 7.2103350 168 / 126 conP: 0.253 CATH-ID: 3.40.50.960 Lumazine synthase. Chain: a, b, c, d, e. Engineered: yes VNG1264c cluster02 -> 1qgoA2 5.6981484 134 / 126 conP: 0.209 CATH-ID: 3.40.50.1400 Anaerobic cobalamine biosynthetic cobalt chelatase. Chain: a. Synonym: VNG1264c cluster03 -> 1bd0A1 7.1480143 211 / 126 conP: 0.208 CATH-ID: 3.20.20.10 Alanine racemase. Chain: a, b. Biological_unit: dimer VNG1264c cluster04 -> 1efuA1 6.8102111 172 / 126 conP: 0.228 CATH-ID: 3.40.50.300 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran --end-- VNG1281h one-of-top-five-correct: 0.395477599756207 CThresh: 6.412872 75 best_is: cluster05 VNG1281h cluster00 -> 1alvA0 6.9168104 173 / 125 conP: 0.254 CATH-ID: 1.10.238.10 Calpain. Chain: a, b. Fragment: calcium binding domain vi. Synonym: s- VNG1281h cluster01 -> 1utg00 5.8129180 70 / 125 conP: 0.306 CATH-ID: 1.10.210.10 Uteroglobin (oxidized) VNG1281h cluster02 -> 1rthA2 6.4794084 94 / 125 conP: 0.319 CATH-ID: 3.30.70.270 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere VNG1281h cluster03 -> 1bxdA0 6.5272301 161 / 125 conP: 0.246 CATH-ID: 3.30.565.10 Osmolarity sensor protein (envz). Chain: a. Fragment: residues 290-450 VNG1281h cluster04 -> 1mml02 6.3346674 146 / 125 conP: 0.251 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes VNG1281h cluster05 -> 1cokA0 8.1982478 68 / 125 conP: 0.470 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi --end-- VNG1283h one-of-top-five-correct: 0.601250384292533 CThresh: 2.296818 100 best_is: cluster11 VNG1283h cluster00 -> 1bu2A2 8.6913868 102 / 65 conP: 0.457 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG1283h cluster01 -> 1mroB2 8.2606079 295 / 65 conP: 0.085 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG1283h cluster02 -> 1fjgT0 9.7683340 99 / 65 conP: 0.542 CATH-TRUNC VNG1283h cluster03 -> 1aisB1 8.6913868 99 / 65 conP: 0.465 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG1283h cluster04 -> 1dn1A3 6.1067133 120 / 65 conP: 0.247 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG1283h cluster11 -> 1jkw02 9.9837235 101 / 65 conP: 0.552 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y --end-- VNG12851 one-of-top-five-correct: 0.327358383034741 CThresh: 6.582158 75 best_is: cluster15 VNG12851 cluster00 -> 1a8p02 6.4747774 162 / 97 conP: 0.163 CATH-ID: 3.40.50.80 Nadph\:ferredoxin oxidoreductase. Chain: null. Synonym: ferredoxin red VNG12851 cluster01 -> 1ei5A2 7.6894965 82 / 97 conP: 0.331 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG12851 cluster02 -> 1k9sA 5.8297648 237 / 97 conP: 0.086 NO-CATH VNG12851 cluster03 -> 1fehA5 5.7954442 211 / 97 conP: 0.101 CATH-ID: 3.40.950.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG12851 cluster04 -> 1ei5A2 6.3565090 82 / 97 conP: 0.252 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG12851 cluster15 -> 1dleA 8.1027868 218 / 97 conP: 0.172 NO-CATH --end-- VNG1287c one-of-top-five-correct: 0.459685088273119 CThresh: 8.421141 25 best_is: cluster04 VNG1287c cluster00 -> 1bqcA0 6.0244876 302 / 139 conP: 0.096 CATH-ID: 3.20.20.80 Beta-mannanase. Chain: a. Ec: 3.2.1.78 VNG1287c cluster01 -> 1b6400 5.5853224 91 / 139 conP: 0.213 CATH-ID: 3.30.70.60 Elongation factor 1-beta. Chain: null. Fragment: guanine exchange fact VNG1287c cluster02 -> 1d5kA0 5.3023776 89 / 139 conP: 0.201 CATH-ID: 3.30.70.60 Translation elongation factor 1beta. Chain: a. Engineered: yes VNG1287c cluster03 -> 1dhmA0 5.4699853 83 / 139 conP: 0.214 CATH-ID: 3.30.70.330 E2 protein. Chain: a, b. Fragment: DNA-binding domain. Engineered: yes VNG1287c cluster04 -> 1gh8A0 9.5094840 89 / 139 conP: 0.458 CATH-ID: 3.30.70.60 Translation elongation factor 1beta. Chain: a. Engineered: yes --end-- VNG1289h one-of-top-five-correct: 0.245697872344396 CThresh: 5.565853 75 best_is: cluster10 VNG1289h cluster00 -> 1jc9A 5.0763193 220 / 70 conP: 0.046 NO-CATH VNG1289h cluster01 -> 1avdA0 5.2997678 123 / 70 conP: 0.121 CATH-ID: 2.40.128.30 Avidin complex with biotin VNG1289h cluster02 -> 1dlc03 6.3401063 197 / 70 conP: 0.081 CATH-ID: 2.100.10.10 Delta-endotoxin cryiiia (bt13) VNG1289h cluster03 -> 2nmbA0 5.7082128 147 / 70 conP: 0.108 CATH-ID: 2.30.29.30 Numb protein. Chain: a. Fragment: ptb domain. Engineered: yes. Gppy pe VNG1289h cluster04 -> 1avpA0 6.4415647 204 / 70 conP: 0.078 CATH-ID: 3.40.395.10 Adenoviral proteinase. Chain: a. Fragment: main. Synonym: avp. Enginee VNG1289h cluster10 -> 1cf3A1 7.1574606 204 / 70 conP: 0.094 CATH-ID: 3.50.50.60 Glucose oxidase. Chain: a. Biological_unit: homodimer --end-- VNG1292h one-of-top-five-correct: 0.175496528157168 CThresh: 1.505680 100 best_is: cluster03 VNG1292h cluster00 -> 1a6dA1 4.9255682 244 / 36 conP: 0.007 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer VNG1292h cluster01 -> 1qrjB2 4.9255682 81 / 36 conP: 0.148 CATH-ID: 1.10.1200.30 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG1292h cluster02 -> 1cokA0 4.4121398 68 / 36 conP: 0.161 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi VNG1292h cluster03 -> 14psA0 4.9255682 226 / 36 conP: 0.010 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG1292h cluster04 -> 1a6dA1 4.9255682 244 / 36 conP: 0.007 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer --end-- VNG12941 one-of-top-five-correct: 0.198833553190226 CThresh: 7.536322 25 best_is: cluster07 VNG12941 cluster00 -> 1a1w00 5.7022553 83 / 119 conP: 0.224 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG12941 cluster01 -> 1agsA 5.7645404 221 / 119 conP: 0.116 NO-CATH VNG12941 cluster02 -> 1qfmA1 5.9437854 349 / 119 conP: 0.061 CATH-ID: 3.40.50.950 Prolyl oligopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-p VNG12941 cluster03 -> 1ngr00 5.9567686 85 / 119 conP: 0.235 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d VNG12941 cluster04 -> 1sly03 6.0870212 173 / 119 conP: 0.160 CATH-ID: 1.10.530.10 70-kda soluble lytic transglycosylase. Chain: null. Synonym: slt70, ex VNG12941 cluster07 -> 1rdr03 6.1909681 81 / 119 conP: 0.252 CATH-ID: 1.20.960.20 Poliovirus 3d polymerase. Chain: null. Engineered: yes --end-- VNG1295h one-of-top-five-correct: 0.446647561863544 CThresh: 3.419089 75 best_is: cluster02 VNG1295h cluster00 -> 1gcuA2 8.1948677 148 / 62 conP: 0.238 CATH-ID: 3.30.360.10 Biliverdin reductase a. Chain: a. Engineered: yes VNG1295h cluster01 -> 1av401 6.4470866 87 / 62 conP: 0.273 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG1295h cluster02 -> 1av401 8.8502856 87 / 62 conP: 0.429 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG1295h cluster03 -> 1cid01 7.1880644 106 / 62 conP: 0.273 CATH-ID: 2.60.40.10 Cd4 (domains 3 and 4) VNG1295h cluster04 -> 1gcuA2 7.1025045 148 / 62 conP: 0.186 CATH-ID: 3.30.360.10 Biliverdin reductase a. Chain: a. Engineered: yes --end-- VNG12990 one-of-top-five-correct: 0.530519149653601 CThresh: 3.565052 75 best_is: cluster00 VNG12990 cluster00 -> 1xxaA0 9.5870701 71 / 73 conP: 0.567 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c, d, e, f. Fragment: initiator met p VNG12990 cluster01 -> 1g71A 8.7259440 344 / 73 conP: 0.069 NO-CATH VNG12990 cluster02 -> 1b94A0 6.6389511 244 / 73 conP: 0.096 CATH-ID: 3.40.600.10 Restriction endonuclease ecorv. Chain: a, b. Engineered: yes. Biologic VNG12990 cluster03 -> 1oneA2 8.6006878 310 / 73 conP: 0.091 CATH-ID: 3.20.20.120 Enolase. Chain: a, b. Synonym: 2-phospho-d-glycerate hydrolase. Ec: 4. VNG12990 cluster04 -> 1xxaA0 8.0208952 71 / 73 conP: 0.455 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c, d, e, f. Fragment: initiator met p --end-- VNG12991 one-of-top-five-correct: 0.759943819000988 CThresh: 3.002015 84 best_is: cluster10 VNG12991 cluster00 -> 1qd1B1 10.314034 180 / 98 conP: 0.543 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG12991 cluster01 -> 1dquA1 10.251194 415 / 98 conP: 0.179 CATH-ID: 3.20.20.270 Isocitrate lyase. Chain: a. Engineered: yes VNG12991 cluster02 -> 1qd1B1 9.9417833 180 / 98 conP: 0.516 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG12991 cluster03 -> 1i6wA0 8.5454076 179 / 98 conP: 0.418 CATH-ID: 3.40.50.950 Lipase a. Chain: a, b. Engineered: yes VNG12991 cluster04 -> 1fiy02 9.4904216 374 / 98 conP: 0.190 CATH-ID: 3.20.20.60 Phosphoenolpyruvate carboxylase. Chain: null. Synonym: pepc. Engineere VNG12991 cluster10 -> 1l2qA 11.582547 457 / 98 conP: 0.192 NO-CATH --end-- VNG1300h one-of-top-five-correct: 0.236170456152017 CThresh: 6.973852 44 best_is: cluster11 VNG1300h cluster00 -> 1fjgC1 4.8464050 91 / 79 conP: 0.124 CATH-TRUNC VNG1300h cluster01 -> 2a3dA0 5.2110557 73 / 79 conP: 0.156 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG1300h cluster02 -> 1qsmB0 5.7343046 149 / 79 conP: 0.099 CATH-ID: 3.40.630.30 Hpa2 histone acetyltransferase. Chain: a, b, c, d. Engineered: yes VNG1300h cluster03 -> 1cvl00 3.7423617 316 / 79 conP: 0.014 CATH-ID: 3.40.50.950 Triacylglycerol hydrolase. Chain: null. Other_details: chain break fro VNG1300h cluster04 -> 2a3dA0 4.6219648 73 / 79 conP: 0.135 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG1300h cluster11 -> 1qhaA2 7.4484410 261 / 79 conP: 0.063 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit --end-- VNG13034 one-of-top-five-correct: 0.418772345298135 CThresh: 7.390665 25 best_is: cluster08 VNG13034 cluster00 -> 1nkl00 8.5056473 78 / 112 conP: 0.390 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG13034 cluster01 -> 1rnl02 4.1977023 76 / 112 conP: 0.158 CATH-ID: 1.10.10.60 Nitrate/nitrite response regulator protein narl. Chain: null. Fragment VNG13034 cluster02 -> 1wdcB1 5.9188440 70 / 112 conP: 0.242 CATH-ID: 1.10.238.10 Scallop myosin. Chain: a, b, c. Fragment: proteolytic fragment, regula VNG13034 cluster03 -> 1pfkA2 4.3473846 126 / 112 conP: 0.125 CATH-ID: 3.40.50.460 Phosphofructokinase (r-state) complex with fructose-1,6-bisphosphate a VNG13034 cluster04 -> 1qi7A1 5.5829101 178 / 112 conP: 0.128 CATH-ID: 3.40.420.10 N-glycosidase. Chain: a. Ec: 3.2.2.22 VNG13034 cluster08 -> 1ile01 9.2019578 254 / 112 conP: 0.207 CATH-ID: 1.10.730.10 Isoleucyl-tRNA synthetase. Chain: null. Synonym: ilers. Engineered: cl --end-- VNG13060 one-of-top-five-correct: 0.515138861889543 CThresh: 4.883630 75 best_is: cluster12 VNG13060 cluster00 -> 1jwbB 7.5504511 240 / 100 conP: 0.193 NO-CATH VNG13060 cluster01 -> 1g6wB 5.4483910 242 / 100 conP: 0.114 NO-CATH VNG13060 cluster02 -> 1moq02 6.7266182 148 / 100 conP: 0.264 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG13060 cluster03 -> 1d4oA0 7.0967478 177 / 100 conP: 0.246 CATH-ID: 3.40.50.70 NADP(h) transhydrogenase. Chain: a. Fragment: NADP(h) binding domain. VNG13060 cluster04 -> 1qdlB0 6.9605967 195 / 100 conP: 0.217 CATH-ID: 3.40.50.880 Anthranilate synthase (trpe-subunit). Chain: a. Fragment: aminodeoxyis VNG13060 cluster12 -> 4uagA1 9.4014750 92 / 100 conP: 0.535 CATH-ID: 3.40.50.1320 Udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase. Chain: a. Synonym: --end-- VNG13131 one-of-top-five-correct: 0.599070363016186 CThresh: 3.864816 75 best_is: cluster04 VNG13131 cluster00 -> 1mroB2 6.9147992 295 / 95 conP: 0.129 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG13131 cluster01 -> 1lmb30 6.5159010 87 / 95 conP: 0.379 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG13131 cluster02 -> 1aep00 8.4508222 153 / 95 conP: 0.396 CATH-ID: 1.20.120.20 Apolipophorin iii VNG13131 cluster03 -> 1cipA2 7.5207818 119 / 95 conP: 0.392 CATH-ID: 1.10.400.10 Guanine nucleotide-binding protein alpha-1 subunit. Chain: a. Synonym: VNG13131 cluster04 -> 1qgkA 9.9868452 876 / 95 conP: 0.005 NO-CATH --end-- VNG1314h one-of-top-five-correct: 0.283292428545246 CThresh: 4.374972 75 best_is: cluster13 VNG1314h cluster00 -> 3pvaA0 6.4688254 334 / 72 conP: 0.033 CATH-ID: 3.60.60.10 Penicillin v acylase. Chain: a, b, c, d, e, f, g, h. Synonym: penicill VNG1314h cluster01 -> 1frpA1 5.0130970 184 / 72 conP: 0.087 CATH-ID: 3.30.540.10 Fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1-phosphohydr VNG1314h cluster02 -> 1fokA3 6.8927200 178 / 72 conP: 0.149 CATH-ID: 3.40.91.30 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG1314h cluster03 -> 1fj7A0 7.1015669 101 / 72 conP: 0.282 CATH-ID: 3.30.70.330 Nucleolin rbd1. Chain: a. Synonym: protein c23. Engineered: yes VNG1314h cluster04 -> 1f3cA0 6.5392653 89 / 72 conP: 0.272 CATH-ID: 3.30.740.10 Dynein. Chain: a, b. Fragment: 8kda light chain. Synonym: protein inhi VNG1314h cluster13 -> 1ecbA1 7.1015669 321 / 72 conP: 0.044 CATH-ID: 3.60.20.10 Glutamine phosphoribosylpyrophosphate amidotransferase. Chain: a, b, c --end-- VNG1317h one-of-top-five-correct: 0.233816921712054 CThresh: 5.337636 75 best_is: cluster12 VNG1317h cluster00 -> 1e4fT4 6.5793224 89 / 64 conP: 0.206 CATH-ID: 3.30.420.70 Cell division protein ftsa. Chain: t. Engineered: yes VNG1317h cluster01 -> 1asyA1 6.1465287 137 / 64 conP: 0.119 CATH-ID: 2.40.50.10 Aspartyl tRNA synthetase (asprs) complexed with transfer ribonucleic a VNG1317h cluster02 -> 1asyA1 6.3629255 137 / 64 conP: 0.126 CATH-ID: 2.40.50.10 Aspartyl tRNA synthetase (asprs) complexed with transfer ribonucleic a VNG1317h cluster03 -> 1irsA0 6.8869873 112 / 64 conP: 0.180 CATH-ID: 2.30.29.30 Irs-1. Chain: a. Fragment: ptb domain. Synonym: insulin receptor subst VNG1317h cluster04 -> 1fgs02 5.0679781 70 / 64 conP: 0.171 CATH-ID: 3.30.790.10 Folylpolyglutamate synthetase. Chain: null. Synonym: fpgs. Engineered: VNG1317h cluster12 -> 1faoA0 7.0121161 100 / 64 conP: 0.206 CATH-ID: 2.30.29.30 Dual adaptor of phosphotyrosine and 3- phosphoinositides. Chain: a. Fr --end-- VNG1318h one-of-top-five-correct: 0.230281181207808 CThresh: 7.363214 25 best_is: cluster12 VNG1318h cluster00 -> 1igd00 5.9831338 61 / 112 conP: 0.257 CATH-ID: 3.10.20.10 Protein g VNG1318h cluster01 -> 1aw000 5.3357133 72 / 112 conP: 0.211 CATH-ID: 3.30.70.100 Menkes copper-transporting atpase. Chain: null. Fragment: fourth metal VNG1318h cluster02 -> 1gkxA 5.2490255 308 / 112 conP: 0.056 NO-CATH VNG1318h cluster03 -> 1fj7A0 5.6365954 101 / 112 conP: 0.196 CATH-ID: 3.30.70.330 Nucleolin rbd1. Chain: a. Synonym: protein c23. Engineered: yes VNG1318h cluster04 -> 1dik04 4.5422892 343 / 112 conP: 0.038 CATH-ID: 3.20.20.60 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG1318h cluster12 -> 1aw000 6.7834405 72 / 112 conP: 0.289 CATH-ID: 3.30.70.100 Menkes copper-transporting atpase. Chain: null. Fragment: fourth metal --end-- VNG13200 one-of-top-five-correct: 0.226422542357742 CThresh: 7.321173 25 best_is: cluster02 VNG13200 cluster00 -> 1ei5A2 5.9555817 82 / 106 conP: 0.221 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG13200 cluster01 -> 1eal00 6.7701761 127 / 106 conP: 0.210 CATH-ID: 2.40.128.20 Ileal lipid binding protein. Chain: null. Synonym: gastrotropin. Engin VNG13200 cluster02 -> 1ei5A2 6.8410478 82 / 106 conP: 0.268 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG13200 cluster03 -> 1dctA1 5.1259976 173 / 106 conP: 0.109 CATH-ID: 3.40.50.150 DNA (cytosine-5) methylase from haeiii. Chain: a, b. Synonym: methyltr VNG13200 cluster04 -> 1apq00 4.8132034 53 / 106 conP: 0.198 CATH-ID: 2.10.25.10 Complement protease c1r. Chain: null. Fragment: egf-like module. Engin --end-- VNG13232 one-of-top-five-correct: 0.404814013016293 CThresh: 3.012956 78 best_is: cluster08 VNG13232 cluster00 -> 1svcP2 5.5097598 63 / 55 conP: 0.264 CATH-ID: 1.10.15.20 Transcription factor nfkb. Chain: p. Fragment: p50 residues 2 - 366. E VNG13232 cluster01 -> 1rthA3 6.0921444 94 / 55 conP: 0.223 CATH-ID: 3.90.840.10 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere VNG13232 cluster02 -> 1dik05 7.2244547 89 / 55 conP: 0.297 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG13232 cluster03 -> 1bvp13 5.9568949 96 / 55 conP: 0.212 CATH-ID: 1.10.170.10 Bluetongue virus 10 (usa) vp7 (btv-10 (usa) vp7) VNG13232 cluster04 -> 1c07A0 7.2244547 95 / 55 conP: 0.282 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm VNG13232 cluster08 -> 1aisB1 8.3567650 99 / 55 conP: 0.341 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t --end-- VNG1326h one-of-top-five-correct: 0.189049988410069 CThresh: 8.722386 25 best_is: cluster13 VNG1326h cluster00 -> 1oacA1 5.8280747 80 / 121 conP: 0.193 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 VNG1326h cluster01 -> 1oacA1 4.4617625 80 / 121 conP: 0.139 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 VNG1326h cluster02 -> 1cuk03 4.7949807 48 / 121 conP: 0.176 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes VNG1326h cluster03 -> 1bl0A2 4.4443231 60 / 121 conP: 0.152 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG1326h cluster04 -> 2fmr00 4.9280480 65 / 121 conP: 0.167 CATH-ID: 3.30.70.210 Fmr1 protein. Chain: null. Fragment: first kh domain residues 216 - 28 VNG1326h cluster13 -> 1oacA1 6.5119640 80 / 121 conP: 0.225 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 --end-- VNG1329h one-of-top-five-correct: 0.297446630801529 CThresh: 6.998976 63 best_is: cluster10 VNG1329h cluster00 -> 1d5aA5 4.8768096 54 / 88 conP: 0.181 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG1329h cluster01 -> 1colA0 6.1500725 197 / 88 conP: 0.093 CATH-ID: 1.10.490.30 Colicin A (c-terminal domain) (pore-forming domain) VNG1329h cluster02 -> 1tfe02 6.1373296 45 / 88 conP: 0.254 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG1329h cluster03 -> 1i27A0 6.4215690 73 / 88 conP: 0.229 CATH-ID: 1.10.10.10 Transcription factor iif. Chain: a. Fragment: rap74 subunit, c-termina VNG1329h cluster04 -> 1hdj00 5.7951209 77 / 88 conP: 0.193 CATH-ID: 1.20.15.80 Human hsp40. Chain: null. Fragment: j-domain. Synonym: hdj-1. Engineer VNG1329h cluster10 -> 14psA0 8.1153288 226 / 88 conP: 0.125 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un --end-- VNG13441 one-of-top-five-correct: 0.399024065011252 CThresh: 3.005801 89 best_is: cluster07 VNG13441 cluster00 -> 1af701 6.3317191 80 / 57 conP: 0.278 CATH-ID: 1.10.155.10 Chemotaxis receptor methyltransferase cher. Chain: null. Engineered: y VNG13441 cluster01 -> 1f4qA0 6.4496071 161 / 57 conP: 0.129 CATH-ID: 1.10.238.10 Grancalcin. Chain: a, b. Engineered: yes VNG13441 cluster02 -> 1af701 6.7575462 80 / 57 conP: 0.304 CATH-ID: 1.10.155.10 Chemotaxis receptor methyltransferase cher. Chain: null. Engineered: y VNG13441 cluster03 -> 1jli00 6.0014989 112 / 57 conP: 0.191 CATH-ID: 1.20.120.200 Interleukin 3. Chain: null. Synonym: multi-csf. Engineered: yes. Mutat VNG13441 cluster04 -> 1ffh02 6.2255530 184 / 57 conP: 0.094 CATH-ID: 3.40.50.300 Ffh. Chain: null. Fragment: 'ng' gtpase fragment of ffh. Engineered: t VNG13441 cluster07 -> 1bu2A2 8.2420398 102 / 57 conP: 0.338 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes --end-- VNG13471 one-of-top-five-correct: 0.563011998960354 CThresh: 2.296359 100 best_is: cluster02 VNG13471 cluster00 -> 1bu2A1 9.3375551 112 / 65 conP: 0.476 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG13471 cluster01 -> 1bu2A1 8.4759973 112 / 65 conP: 0.415 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG13471 cluster02 -> 1bu2A1 9.5529446 112 / 65 conP: 0.492 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG13471 cluster03 -> 1coo00 6.9330855 81 / 65 conP: 0.388 CATH-ID: 1.10.359.10 RNA polymerase alpha subunit. Chain: null. Fragment: cooh-terminal dom VNG13471 cluster04 -> 1jn8A 8.0452184 123 / 65 conP: 0.358 NO-CATH --end-- VNG1349c one-of-top-five-correct: 0.437968885916111 CThresh: 5.645230 75 best_is: cluster03 VNG1349c cluster00 -> 1ema00 7.2055697 221 / 89 conP: 0.138 CATH-ID: 2.40.155.10 Green fluorescent protein. Chain: null. Engineered: yes. Mutation: 65 VNG1349c cluster01 -> 1eg9B0 6.8169348 193 / 89 conP: 0.151 CATH-ID: 3.10.30.90 Naphthalene 1,2-dioxygenase alpha subunit. Chain: a. Engineered: yes. VNG1349c cluster02 -> 2std00 6.7291497 162 / 89 conP: 0.181 CATH-ID: 3.10.30.90 Scytalone dehydratase. Chain: null. Engineered: yes VNG1349c cluster03 -> 1hcjA 9.1487445 226 / 89 conP: 0.212 NO-CATH VNG1349c cluster04 -> 1h6rA 7.5942047 227 / 89 conP: 0.146 NO-CATH --end-- VNG13500 one-of-top-five-correct: 0.578733883160288 CThresh: 7.020983 25 best_is: cluster16 VNG13500 cluster00 -> 2ng101 8.1771571 89 / 126 conP: 0.409 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG13500 cluster01 -> 1d5aA5 7.7330147 54 / 126 conP: 0.425 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG13500 cluster02 -> 1au1A0 9.1232755 166 / 126 conP: 0.372 CATH-ID: 1.20.120.210 Interferon-beta. Chain: a, b. Engineered: yes VNG13500 cluster03 -> 1ezfA 6.4473549 323 / 126 conP: 0.103 NO-CATH VNG13500 cluster04 -> 1e7aA2 7.4717996 90 / 126 conP: 0.359 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG13500 cluster16 -> 1bbhA0 10.482321 131 / 126 conP: 0.515 CATH-ID: 1.20.120.10 Cytochrome c' --end-- VNG13501 one-of-top-five-correct: 0.375672254849177 CThresh: 6.973940 45 best_is: cluster02 VNG13501 cluster00 -> 1jwfA 6.8608527 139 / 129 conP: 0.273 NO-CATH VNG13501 cluster01 -> 1brrA0 6.7584803 230 / 129 conP: 0.182 CATH-ID: 1.20.85.10 Bacteriorhodopsin. Chain: a, b, c. Synonym: br. Other_details: schiff VNG13501 cluster02 -> 1bmtA1 8.1327185 87 / 129 conP: 0.418 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG13501 cluster03 -> 1elkA0 7.2557705 153 / 129 conP: 0.281 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG13501 cluster04 -> 1dvkA0 6.7925342 149 / 129 conP: 0.259 CATH-ID: 1.20.940.10 Prp18. Chain: a, b. Engineered: yes --end-- VNG13521 one-of-top-five-correct: 0.210017565507804 CThresh: 6.998209 61 best_is: cluster16 VNG13521 cluster00 -> 1cqwA0 5.2603356 295 / 104 conP: 0.055 CATH-ID: 3.40.50.950 Haloalkane dehalogenase. 1-chlorohexane halidohydrolase. Chain: a. Eng VNG13521 cluster01 -> 1l0wA 5.9164424 580 / 104 conP: 0.010 NO-CATH VNG13521 cluster02 -> 1g28A0 4.8813441 104 / 104 conP: 0.158 CATH-ID: 3.30.450.20 Phy3 protein. Chain: a, b, c, d. Fragment: fmn-binding domain of chime VNG13521 cluster03 -> 1cbn00 5.6037793 46 / 104 conP: 0.255 CATH-ID: 3.30.70.10 Crambin VNG13521 cluster04 -> 5mdhA2 4.7957738 180 / 104 conP: 0.099 CATH-ID: 3.90.110.10 Malate dehydrogenase. Chain: a, b. Engineered: yes VNG13521 cluster16 -> 1l0wA 6.4767768 580 / 104 conP: 0.012 NO-CATH --end-- VNG13522 one-of-top-five-correct: 0.205873519209821 CThresh: 6.750745 75 best_is: cluster18 VNG13522 cluster00 -> 1inp01 5.3151396 47 / 87 conP: 0.217 CATH-ID: 4.10.460.10 Inositol polyphosphate 1-phosphatase (1-ptase) (inositol-1,4-bisphosph VNG13522 cluster01 -> 1csmA0 4.9650917 252 / 87 conP: 0.046 CATH-ID: 1.10.590.10 Chorismate mutase. Chain: a, b. Mutation: allele mutant, thr 226 ile. VNG13522 cluster02 -> 1cd1A1 6.5740413 178 / 87 conP: 0.122 CATH-ID: 3.30.500.10 Cd1. Chain: a, b, c, d. Fragment: alpha1, alpha2, alpha3, beta2-microg VNG13522 cluster03 -> 1k06A 6.4871374 807 / 87 conP: 0.001 NO-CATH VNG13522 cluster04 -> 1g8jA 4.9221114 820 / 87 conP: 0.000 NO-CATH VNG13522 cluster18 -> 1lhs00 6.6827657 153 / 87 conP: 0.149 CATH-ID: 1.10.490.10 Myoglobin (aquo-met) --end-- VNG13523 one-of-top-five-correct: 0.491073004656315 CThresh: 5.653233 75 best_is: cluster02 VNG13523 cluster00 -> 1fc2C0 6.0102569 43 / 141 conP: 0.425 CATH-ID: 4.10.310.10 Immunoglobulin fc and fragment b of protein a complex VNG13523 cluster01 -> 1elrA0 6.6481325 128 / 141 conP: 0.368 CATH-ID: 1.25.40.10 Tpr2a-domain of hop. Chain: a. Fragment: middle domain. Engineered: ye VNG13523 cluster02 -> 1qckA0 8.5533235 89 / 141 conP: 0.550 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG13523 cluster03 -> 1tgoA5 6.0197623 178 / 141 conP: 0.275 CATH-ID: 3.90.710.10 Thermostable b DNA polymerase. Chain: a. Engineered: yes VNG13523 cluster04 -> 1bw6A0 6.9472830 56 / 141 conP: 0.476 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer --end-- VNG13530 one-of-top-five-correct: 0.364946582553125 CThresh: 4.538377 75 best_is: cluster02 VNG13530 cluster00 -> 1bia02 5.7927602 181 / 80 conP: 0.130 CATH-ID: 3.30.930.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG13530 cluster01 -> 1dzoA0 7.7098884 120 / 80 conP: 0.307 CATH-ID: 3.30.700.10 Type iv pilin. Chain: a. Fragment: globular domain. Engineered: yes. M VNG13530 cluster02 -> 1cd1A1 8.0179876 178 / 80 conP: 0.226 CATH-ID: 3.30.500.10 Cd1. Chain: a, b, c, d. Fragment: alpha1, alpha2, alpha3, beta2-microg VNG13530 cluster03 -> 2if100 5.3035568 126 / 80 conP: 0.174 CATH-ID: 3.30.780.10 Eif1. Chain: null. Synonym: sui1. Engineered: yes. Other_details: n-te VNG13530 cluster04 -> 1joeA 6.1973470 148 / 80 conP: 0.183 NO-CATH --end-- VNG13531 one-of-top-five-correct: 0.322291086603153 CThresh: 4.513060 75 best_is: cluster13 VNG13531 cluster00 -> 1prxA1 6.3221028 150 / 65 conP: 0.133 CATH-ID: 3.40.30.10 Horf6. Chain: a, b. Engineered: yes. Mutation: c91s VNG13531 cluster01 -> 1gdtA1 7.1836606 98 / 65 conP: 0.256 CATH-ID: 3.40.50.1390 Gamma-delta resolvase. Chain: a, b. Synonym: gd resolvase. Engineered: VNG13531 cluster02 -> 1dtwB1 7.1836606 125 / 65 conP: 0.205 CATH-ID: 3.40.50.920 Branched-chain alpha-keto acid dehydrogenase alpha subunit. Chain: a. VNG13531 cluster03 -> 1ijwC 6.2644251 47 / 65 conP: 0.314 NO-CATH VNG13531 cluster04 -> 1qckA0 6.7528817 89 / 65 conP: 0.251 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG13531 cluster13 -> 1ft1A0 7.8298290 315 / 65 conP: 0.039 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes --end-- VNG13532 one-of-top-five-correct: 0.185474602667887 CThresh: 6.959380 37 best_is: cluster18 VNG13532 cluster00 -> 1e7aA3 5.0791185 92 / 87 conP: 0.147 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG13532 cluster01 -> 1ee8A 5.3133679 266 / 87 conP: 0.043 NO-CATH VNG13532 cluster02 -> 1juoA 4.2075301 172 / 87 conP: 0.066 NO-CATH VNG13532 cluster03 -> 1ebfA2 4.3157185 175 / 87 conP: 0.066 CATH-ID: 3.90.750.10 Homoserine dehydrogenase. Chain: a, b. Engineered: yes VNG13532 cluster04 -> 1nf1A2 4.2075301 177 / 87 conP: 0.063 CATH-ID: 1.10.506.10 Neurofibromin. Chain: a. Fragment: gap related domain. Synonym: nf1-33 VNG13532 cluster18 -> 1ag200 6.4223032 103 / 87 conP: 0.188 CATH-ID: 1.10.790.10 Major prion protein. Chain: null. Fragment: domain 121 - 231. Synonym: --end-- VNG13533 one-of-top-five-correct: 0.279928423453836 CThresh: 6.731914 75 best_is: cluster05 VNG13533 cluster00 -> 1a8y01 6.8358925 124 / 85 conP: 0.183 CATH-ID: 3.40.30.10 Calsequestrin. Chain: null VNG13533 cluster01 -> 1dfuP0 5.9051397 94 / 85 conP: 0.180 CATH-ID: 2.40.240.10 Ribosomal protein l25. Chain: p. Engineered: yes. Other_details: prote VNG13533 cluster02 -> 1bxrA2 7.0344997 275 / 85 conP: 0.064 CATH-ID: 3.30.470.20 Carbamoyl-phosphate synthase. Chain: a, b, c, d, e, f, g, h. Engineere VNG13533 cluster03 -> 1bh9A0 5.1757254 45 / 85 conP: 0.210 CATH-ID: 1.10.20.10 Tafii18. Chain: a. Fragment: residues 31 - 75. Synonym: transcription VNG13533 cluster04 -> 1kvdB0 4.7257371 77 / 85 conP: 0.152 CATH-ID: 3.30.44.10 Smk toxin. Chain: a, b, c, d. Fragment: chain a and c are residues 19 VNG13533 cluster05 -> 1efuA1 7.8289281 172 / 85 conP: 0.167 CATH-ID: 3.40.50.300 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran --end-- VNG1357c one-of-top-five-correct: 0.576270953973658 CThresh: 4.948706 75 best_is: cluster04 VNG1357c cluster00 -> 1gpmA3 9.2717072 108 / 81 conP: 0.418 CATH-ID: 3.30.300.10 Gmp synthetase. Chain: a, b, c, d. Synonym: xmp aminase. Engineered: y VNG1357c cluster01 -> 2vik00 8.1805052 126 / 81 conP: 0.310 CATH-ID: 3.40.20.10 Villin 14t. Chain: null. Fragment: residues 1 - 126. Synonym: villin d VNG1357c cluster02 -> 1b7yB5 6.9713070 191 / 81 conP: 0.153 CATH-ID: 3.40.690.10 Phenylalanyl-tRNA synthetase. Chain: a. Synonym: phers. Phenylalanyl-t VNG1357c cluster03 -> 1mxa03 5.3590426 106 / 81 conP: 0.191 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met VNG1357c cluster04 -> 1qd1B2 10.539556 145 / 81 conP: 0.429 CATH-ID: 3.30.70.670 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot --end-- VNG1362h one-of-top-five-correct: 0.460589581685622 CThresh: 6.966913 25 best_is: cluster01 VNG1362h cluster00 -> 1ytfD1 7.1030287 53 / 132 conP: 0.398 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG1362h cluster01 -> 1ixmA1 9.0193370 59 / 132 conP: 0.527 CATH-ID: 1.20.15.100 Sporulation response regulatory protein. Chain: a, b. Synonym: spo0b. VNG1362h cluster02 -> 1repC2 6.6475811 91 / 132 conP: 0.322 CATH-ID: 1.10.10.10 DNA (5'- d( Cp Cp Tp Gp Tp Gp Ap Cp Ap Ap Ap Tp Tp Gp Cp Cp Cp Tp Cp A VNG1362h cluster03 -> 1dlc01 6.7289752 229 / 132 conP: 0.189 CATH-ID: 1.20.190.10 Delta-endotoxin cryiiia (bt13) VNG1362h cluster04 -> 1ytfD1 7.7899762 53 / 132 conP: 0.447 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami --end-- VNG13640 one-of-top-five-correct: 0.333194819815655 CThresh: 6.496284 75 best_is: cluster00 VNG13640 cluster00 -> 2blmA 8.3865513 260 / 86 conP: 0.111 NO-CATH VNG13640 cluster01 -> 2polA1 5.0470679 123 / 86 conP: 0.126 CATH-ID: 3.10.150.10 Pol iii (beta subunit) VNG13640 cluster02 -> 1qqnA4 5.9236253 84 / 86 conP: 0.204 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG13640 cluster03 -> 2nef00 5.0644283 136 / 86 conP: 0.116 CATH-ID: 3.30.62.10 Negative factor (f-protein). Chain: null. Synonym: HIV-1 nef. Engineer VNG13640 cluster04 -> 1a81A2 6.6181316 45 / 86 conP: 0.301 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi --end-- VNG1366h one-of-top-five-correct: 0.326158624751712 CThresh: 4.845679 75 best_is: cluster14 VNG1366h cluster00 -> 1apyB0 5.5734860 141 / 74 conP: 0.139 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG1366h cluster01 -> 1elwA0 4.9521120 117 / 74 conP: 0.145 CATH-ID: 1.25.40.10 Tpr1-domain of hop. Chain: a, b. Fragment: n-terminal domain. Engineer VNG1366h cluster02 -> 9gafA2 6.4019846 143 / 74 conP: 0.168 CATH-ID: 3.50.11.10 Glycosylasparaginase. Chain: a, c. Synonym: glycoasparaginase,aspartyl VNG1366h cluster03 -> 9gafA2 7.0233586 143 / 74 conP: 0.194 CATH-ID: 3.50.11.10 Glycosylasparaginase. Chain: a, c. Synonym: glycoasparaginase,aspartyl VNG1366h cluster04 -> 1mb100 5.1592367 98 / 74 conP: 0.177 CATH-ID: 3.10.260.10 Mlu1-box binding protein. Chain: null. Fragment: DNA-binding domain. S VNG1366h cluster14 -> 1gsh02 7.8240646 105 / 74 conP: 0.303 CATH-ID: 3.30.470.20 Glutathione biosynthetic ligase. Chain: null. Synonym: glutathione syn --end-- VNG13742 one-of-top-five-correct: 0.535437400244953 CThresh: 2.898139 100 best_is: cluster17 VNG13742 cluster00 -> 1faeA1 8.8548983 425 / 66 conP: 0.025 CATH-ID: 1.50.10.10 Endo-1,4-beta-glucanase f. Chain: a. Fragment: catalytic module. Synon VNG13742 cluster01 -> 1j8mF1 7.5684895 87 / 66 conP: 0.389 CATH-ID: 1.20.120.140 Signal recognition 54 kda protein. Chain: f. Fragment: g-domain, gtpas VNG13742 cluster02 -> 1fiqB2 6.3808454 126 / 66 conP: 0.230 CATH-ID: 3.30.465.10 Xanthine oxidase. Chain: a. Fragment: residues 1-219. Synonym: xo. Xan VNG13742 cluster03 -> 1elkA0 9.2023144 153 / 66 conP: 0.336 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG13742 cluster04 -> 1j7rA0 6.0676792 77 / 66 conP: 0.315 CATH-ID: 1.10.238.10 Calcium vector protein. Chain: a. Fragment: n-terminal domain (residue VNG13742 cluster17 -> 1j8mF1 9.4981027 87 / 66 conP: 0.527 CATH-ID: 1.20.120.140 Signal recognition 54 kda protein. Chain: f. Fragment: g-domain, gtpas --end-- VNG13750 one-of-top-five-correct: 0.246397780637772 CThresh: 6.984818 27 best_is: cluster01 VNG13750 cluster00 -> 1frpA1 6.1032205 184 / 104 conP: 0.135 CATH-ID: 3.30.540.10 Fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1-phosphohydr VNG13750 cluster01 -> 1a6jA0 7.0371111 150 / 104 conP: 0.205 CATH-ID: 3.40.930.10 Nitrogen regulatory iia protein. Chain: a, b. Synonym: iia-nitrogen, e VNG13750 cluster02 -> 1pxtA2 5.1693300 156 / 104 conP: 0.126 CATH-ID: 3.40.47.20 Peroxisomal 3-ketoacyl-coa thiolase VNG13750 cluster03 -> 1f6yA0 5.5967710 258 / 104 conP: 0.076 CATH-ID: 3.20.20.20 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransfera VNG13750 cluster04 -> 1f5mA0 6.8110905 176 / 104 conP: 0.169 CATH-ID: 3.30.450.40 Gaf. Chain: a, b. Engineered: yes --end-- VNG13751 one-of-top-five-correct: 0.347885645360385 CThresh: 6.923730 31 best_is: cluster02 VNG13751 cluster00 -> 1ytfD1 5.5932372 53 / 109 conP: 0.258 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG13751 cluster01 -> 1qmgA2 6.9041696 293 / 109 conP: 0.098 CATH-ID: 1.10.572.10 Acetohydroxy-acid isomeroreductase. Chain: a, b, c, d. Synonym: keto-a VNG13751 cluster02 -> 1e68A0 8.2357868 70 / 109 conP: 0.401 CATH-ID: 1.20.225.10 Bacteriocin as-48. Chain: a. Fragment: bacteriocin as-48 residue 36-10 VNG13751 cluster03 -> 1abz00 5.3143675 38 / 109 conP: 0.261 CATH-ID: 1.20.860.10 Alpha-t-alpha. Chain: null. Synonym: ata. Engineered: yes. Other_detai VNG13751 cluster04 -> 1cb8A1 6.9041696 312 / 109 conP: 0.088 CATH-ID: 1.50.40.10 Chondroitinase ac. Chain: a. Ec: 4.2.2.5 --end-- VNG1376h one-of-top-five-correct: 0.371927567154753 CThresh: 3.003768 82 best_is: cluster03 VNG1376h cluster00 -> 1cf7B0 7.5609937 82 / 53 conP: 0.326 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG1376h cluster01 -> 1iso00 6.4970087 414 / 53 conP: 0.004 CATH-ID: 3.40.718.10 Isocitrate dehydrogenase. Chain: null. Synonym: oxalosuccinate decarbo VNG1376h cluster02 -> 1ao0A1 5.2711684 300 / 53 conP: 0.014 CATH-ID: 3.60.20.10 Glutamine phosphoribosylpyrophosphate amidotransferase. Chain: a, b, c VNG1376h cluster03 -> 1alo02 8.0189588 119 / 53 conP: 0.253 CATH-ID: 1.10.150.120 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG1376h cluster04 -> 1fts01 7.1030287 84 / 53 conP: 0.292 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: --end-- VNG13831 one-of-top-five-correct: 0.194638672007627 CThresh: 6.977797 75 best_is: cluster14 VNG13831 cluster00 -> 1fapB0 4.6048448 95 / 76 conP: 0.108 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG13831 cluster01 -> 1ibrB0 6.3365768 458 / 76 conP: 0.007 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG13831 cluster02 -> 1npc02 5.0526989 161 / 76 conP: 0.070 CATH-ID: 1.10.390.10 Neutral protease VNG13831 cluster03 -> 1dioA 4.3198367 551 / 76 conP: 0.002 NO-CATH VNG13831 cluster04 -> 1udg00 5.7150714 228 / 76 conP: 0.047 CATH-ID: 3.40.470.10 Uracil-DNA glycosylase. Chain: null. Other_details: encoded by the ul2 VNG13831 cluster14 -> 1e0cA1 6.8441284 144 / 76 conP: 0.128 CATH-ID: 3.40.250.10 Sulfurtransferase. Chain: a. Synonym: rhodanese. Engineered: yes --end-- VNG1384h one-of-top-five-correct: 0.28155882021489 CThresh: 5.067821 75 best_is: cluster18 VNG1384h cluster00 -> 2cblA3 6.0101414 86 / 62 conP: 0.188 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 VNG1384h cluster01 -> 2cblA3 7.2678842 86 / 62 conP: 0.249 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 VNG1384h cluster02 -> 2trxA0 6.2286140 108 / 62 conP: 0.161 CATH-ID: 3.40.30.10 Thioredoxin VNG1384h cluster03 -> 1es8A0 6.8840319 192 / 62 conP: 0.082 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes VNG1384h cluster04 -> 1pda03 6.9720629 87 / 62 conP: 0.232 CATH-ID: 3.30.160.40 Porphobilinogen deaminase VNG1384h cluster18 -> 1es8A0 7.6200674 192 / 62 conP: 0.100 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes --end-- VNG13880 one-of-top-five-correct: 0.369476702890815 CThresh: 3.003120 93 best_is: cluster13 VNG13880 cluster00 -> 3pgm00 6.0514009 230 / 61 conP: 0.065 CATH-ID: 3.40.50.1240 Phosphoglycerate mutase de-phospho enzyme VNG13880 cluster01 -> 1e96B0 6.2383724 185 / 61 conP: 0.110 CATH-ID: 1.25.40.10 Ras-related c3 botulinum toxin substrate 1. Chain: a. Synonym: rac1. E VNG13880 cluster02 -> 5tmpA0 6.7100284 210 / 61 conP: 0.096 CATH-ID: 3.40.50.300 Thymidylate kinase. Chain: a. Engineered: yes VNG13880 cluster03 -> 1i6kA 6.5818281 316 / 61 conP: 0.029 NO-CATH VNG13880 cluster04 -> 1l5jA 6.9295708 862 / 61 conP: 0.000 NO-CATH VNG13880 cluster13 -> 1bkdS2 7.8077408 242 / 61 conP: 0.092 CATH-ID: 1.10.840.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y --end-- VNG13890 one-of-top-five-correct: 0.420255933502848 CThresh: 3.937700 75 best_is: cluster15 VNG13890 cluster00 -> 1he8A3 4.8468119 111 / 72 conP: 0.170 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony VNG13890 cluster01 -> 2trcP1 6.8927200 131 / 72 conP: 0.233 CATH-ID: 3.40.30.10 Transducin. Chain: b, g. Fragment: lys-c resistant fragment, the gamma VNG13890 cluster02 -> 1jgjA0 8.1458019 217 / 72 conP: 0.159 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG13890 cluster03 -> 1e7aA4 7.1714042 86 / 72 conP: 0.338 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG13890 cluster04 -> 1fts01 5.9550050 84 / 72 conP: 0.268 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG13890 cluster15 -> 1mroA3 8.5634959 227 / 72 conP: 0.162 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: --end-- VNG13891 one-of-top-five-correct: 0.374785971166052 CThresh: 6.979511 28 best_is: cluster14 VNG13891 cluster00 -> 1abmA0 5.7366809 198 / 127 conP: 0.161 CATH-ID: 3.90.149.10 Manganese superoxide dismutase VNG13891 cluster01 -> 1d09B1 5.8153669 93 / 127 conP: 0.259 CATH-ID: 3.30.70.140 Aspartate carbamoyltransferase catalytic chain. Chain: a, c. Engineere VNG13891 cluster02 -> 1dik06 4.7302768 98 / 127 conP: 0.199 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG13891 cluster03 -> 1copD0 4.0722070 66 / 127 conP: 0.197 CATH-ID: 3.30.240.10 Cro repressor. Chain: d, e. Engineered: yes VNG13891 cluster04 -> 1tys00 5.4570522 264 / 127 conP: 0.109 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG13891 cluster14 -> 1dik06 8.1704363 98 / 127 conP: 0.401 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y --end-- VNG13950 one-of-top-five-correct: 0.265304357342197 CThresh: 7.105134 25 best_is: cluster13 VNG13950 cluster00 -> 1bebA0 6.2222429 156 / 117 conP: 0.190 CATH-ID: 2.40.128.20 Beta-lactoglobulin. Chain: a, b. Biological_unit: predominantly dimeri VNG13950 cluster01 -> 1eu8A2 4.6199448 217 / 117 conP: 0.093 CATH-ID: 3.40.190.10 Trehalose/maltose binding protein. Chain: a. Engineered: yes VNG13950 cluster02 -> 1din00 5.4460154 233 / 117 conP: 0.106 CATH-ID: 3.40.50.950 Dienelactone hydrolase. Chain: null. Synonym: dlh. Engineered: yes VNG13950 cluster03 -> 1g63A0 5.0440371 164 / 117 conP: 0.137 CATH-ID: 3.40.50.1950 Epidermin modifying enzyme epid. Chain: a, b, c, d, e, f, g, h, i, j, VNG13950 cluster04 -> 1b3jA1 5.8661767 170 / 117 conP: 0.163 CATH-ID: 3.30.500.10 Mhc class i homolog mic-a. Chain: a. Fragment: extracellular domain, r VNG13950 cluster13 -> 1exnA2 7.0676066 188 / 117 conP: 0.198 CATH-ID: 3.40.50.1010 5'-exonuclease. Chain: a, b. Synonym: 5'-nuclease. 5'-3' exonuclease. --end-- VNG1403h one-of-top-five-correct: 0.194880175953501 CThresh: 8.333162 25 best_is: cluster04 VNG1403h cluster00 -> 1vmoA0 4.8003939 163 / 130 conP: 0.120 CATH-ID: 2.100.10.20 Vitelline membrane outer layer protein i VNG1403h cluster01 -> 1ecrA2 4.6387998 77 / 130 conP: 0.171 CATH-ID: 3.30.54.10 Replication terminator protein. Chain: a. Synonym: tus. Engineered: ye VNG1403h cluster02 -> 1ipbA 5.3951741 191 / 130 conP: 0.122 NO-CATH VNG1403h cluster03 -> 1a28A0 5.1514404 251 / 130 conP: 0.086 CATH-ID: 1.10.565.10 Progesterone receptor. Chain: a, b. Fragment: ligand binding domain. E VNG1403h cluster04 -> 1bg8A0 6.2334147 76 / 130 conP: 0.247 CATH-ID: 1.10.890.10 Hdea. Chain: a, b, c. Synonym: 10k-s protein, hypothetical protein a --end-- VNG1405c one-of-top-five-correct: 0.475867750155397 CThresh: 7.911587 25 best_is: cluster03 VNG1405c cluster00 -> 1bia01 7.3150415 64 / 123 conP: 0.330 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG1405c cluster01 -> 1bi2B1 7.9827296 73 / 123 conP: 0.362 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG1405c cluster02 -> 1qgpA0 7.7696762 76 / 123 conP: 0.344 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d VNG1405c cluster03 -> 1smtB0 9.8206814 101 / 123 conP: 0.451 CATH-ID: 1.10.10.10 Transcriptional repressor smtb. Chain: a, b. Engineered: yes. Biologic VNG1405c cluster04 -> 1bi2B1 7.3647714 73 / 123 conP: 0.322 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye --end-- VNG1407c one-of-top-five-correct: 0.427762968912018 CThresh: 6.756505 75 best_is: cluster06 VNG1407c cluster00 -> 1bvqA0 6.0040567 139 / 131 conP: 0.240 CATH-ID: 3.10.129.10 4-hydroxybenzoyl coa thioesterase. Chain: a. Ec: 3.8.1.6 VNG1407c cluster01 -> 1dr9A2 6.1467878 95 / 131 conP: 0.294 CATH-ID: 2.60.40.10 T lymphocyte activation antigen. Chain: a. Fragment: extracellular reg VNG1407c cluster02 -> 1av401 6.9819943 87 / 131 conP: 0.356 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG1407c cluster03 -> 1reqA1 5.1566916 522 / 131 conP: 0.031 CATH-ID: 3.20.20.240 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de VNG1407c cluster04 -> 1ev0A0 7.0721368 58 / 131 conP: 0.399 CATH-ID: 3.30.1070.10 Mine. Chain: a, b. Fragment: mine topological specificity domain. Syno VNG1407c cluster06 -> 1molA0 8.5825492 94 / 131 conP: 0.458 CATH-ID: 3.10.30.10 Monellin (single-chain, fused) --end-- VNG14090 one-of-top-five-correct: 0.358730195187076 CThresh: 5.268183 75 best_is: cluster08 VNG14090 cluster00 -> 1adjA2 6.9110299 96 / 77 conP: 0.259 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Biological_unit: active a VNG14090 cluster01 -> 1qf6A5 6.7063807 102 / 77 conP: 0.238 CATH-ID: 3.40.50.800 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG14090 cluster02 -> 1qf6A5 8.3435739 102 / 77 conP: 0.334 CATH-ID: 3.40.50.800 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG14090 cluster03 -> 6mhtA2 5.5010870 98 / 77 conP: 0.186 CATH-ID: 3.10.90.10 Cytosine-specific methyltransferase hhai. Chain: a. Engineered: yes. B VNG14090 cluster04 -> 1plq00 5.4784859 258 / 77 conP: 0.050 CATH-ID: 3.70.10.10 Proliferating cell nuclear antigen (pcna) (synchrotron x-ray diffracti VNG14090 cluster08 -> 1httA2 8.3435739 98 / 77 conP: 0.342 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Synonym: histidine-tRNA l --end-- VNG14180 one-of-top-five-correct: 0.659787165873815 CThresh: 2.533266 100 best_is: cluster18 VNG14180 cluster00 -> 1a0b00 8.5179656 117 / 73 conP: 0.439 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG14180 cluster01 -> 1abv00 7.3647714 105 / 73 conP: 0.386 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi VNG14180 cluster02 -> 1vom04 7.7767435 102 / 73 conP: 0.422 CATH-ID: 1.10.183.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y VNG14180 cluster03 -> 1vom04 7.1587853 102 / 73 conP: 0.379 CATH-ID: 1.10.183.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y VNG14180 cluster04 -> 2hmqA0 7.8940306 113 / 73 conP: 0.404 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG14180 cluster18 -> 1b3uA0 10.597749 588 / 73 conP: 0.015 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu --end-- VNG1423h one-of-top-five-correct: 0.333756381546438 CThresh: 1.413437 100 best_is: cluster09 VNG1423h cluster00 -> 1h72C 6.7390678 296 / 47 conP: 0.019 NO-CATH VNG1423h cluster01 -> 1mroB2 6.7390678 295 / 47 conP: 0.019 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG1423h cluster02 -> 1xgsA1 6.5017464 218 / 47 conP: 0.053 CATH-ID: 3.90.230.10 Methionine aminopeptidase. Chain: a, b. Biological_unit: active as a m VNG1423h cluster03 -> 1bm9A0 6.2644251 120 / 47 conP: 0.185 CATH-ID: 1.10.10.10 Replication terminator protein. Chain: a, b. Synonym: rtp, ter. Engine VNG1423h cluster04 -> 1xgsA1 6.7390678 218 / 47 conP: 0.057 CATH-ID: 3.90.230.10 Methionine aminopeptidase. Chain: a, b. Biological_unit: active as a m VNG1423h cluster09 -> 1az902 6.9763891 266 / 47 conP: 0.031 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet --end-- VNG1425h one-of-top-five-correct: 0.450453772250617 CThresh: 6.997252 69 best_is: cluster16 VNG1425h cluster00 -> 1az902 5.3300467 266 / 97 conP: 0.057 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet VNG1425h cluster01 -> 1pdo00 7.0471428 129 / 97 conP: 0.210 CATH-ID: 3.40.50.510 Mannose permease. Chain: null. Fragment: iia ==man== domain, residues VNG1425h cluster02 -> 1nal10 6.0932005 291 / 97 conP: 0.059 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 VNG1425h cluster03 -> 1egzA0 6.6970640 291 / 97 conP: 0.070 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: VNG1425h cluster04 -> 1az902 5.8703098 266 / 97 conP: 0.066 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet VNG1425h cluster16 -> 1ihp01 9.7181811 297 / 97 conP: 0.146 CATH-ID: 3.40.50.1240 Phytase. Chain: null. Synonym: myo-inositol-hexakisphosphate-3-phospho --end-- VNG1426h one-of-top-five-correct: 0.374889685517699 CThresh: 6.735363 75 best_is: cluster14 VNG1426h cluster00 -> 1cb8A1 8.2038442 312 / 91 conP: 0.080 CATH-ID: 1.50.40.10 Chondroitinase ac. Chain: a. Ec: 4.2.2.5 VNG1426h cluster01 -> 1dn1A3 7.2545216 120 / 91 conP: 0.225 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG1426h cluster02 -> 1qhaA2 5.9057345 261 / 91 conP: 0.062 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG1426h cluster03 -> 1mun02 6.3962695 112 / 91 conP: 0.194 CATH-ID: 1.10.340.10 Adenine glycosylase. Chain: null. Fragment: catalytic domain. Engineer VNG1426h cluster04 -> 1a5t03 7.7224019 116 / 91 conP: 0.255 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG1426h cluster14 -> 1bkdS1 8.8806586 189 / 91 conP: 0.214 CATH-ID: 1.20.870.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y --end-- VNG1427h one-of-top-five-correct: 0.315699286178507 CThresh: 5.901486 75 best_is: cluster14 VNG1427h cluster00 -> 1aisB1 6.4421502 99 / 79 conP: 0.211 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG1427h cluster01 -> 1oasA1 5.4720043 193 / 79 conP: 0.081 CATH-ID: 3.40.50.1900 O-acetylserine sulfhydrylase. Chain: a, b. Synonym: cystein synthase. VNG1427h cluster02 -> 1yub02 5.3624748 80 / 79 conP: 0.188 CATH-ID: 1.10.221.10 Rrna methyltransferase. Chain: null. Synonym: ermam. Engineered: yes. VNG1427h cluster03 -> 1fqvB0 5.5538239 137 / 79 conP: 0.129 CATH-ID: 3.30.710.10 Skp2. Chain: a, c, e, g, i, k, m, o. Fragment: 101-436. Synonym: cycli VNG1427h cluster04 -> 1bu2A1 5.3317632 112 / 79 conP: 0.147 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG1427h cluster14 -> 1mla02 8.0576389 232 / 79 conP: 0.116 CATH-ID: 3.40.366.10 Malonyl-coenzyme a acyl carrier protein transacylase. Chain: null. Syn --end-- VNG1438h one-of-top-five-correct: 0.210433971312297 CThresh: 5.825868 75 best_is: cluster08 VNG1438h cluster00 -> 1aab00 5.3148615 83 / 82 conP: 0.192 CATH-ID: 1.10.30.10 High mobility group protein. Chain: null. Fragment: fragment a (residu VNG1438h cluster01 -> 1cnt10 5.7319448 150 / 82 conP: 0.131 CATH-ID: 1.20.120.200 Ciliary neurotrophic factor. Chain: 1, 2, 3, 4. Synonym: cntf. Enginee VNG1438h cluster02 -> 1azsC2 4.8502946 115 / 82 conP: 0.136 CATH-ID: 1.10.400.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG1438h cluster03 -> 1tc3C0 5.5365846 51 / 82 conP: 0.249 CATH-ID: 1.10.10.60 DNA. Chain: a, b. Engineered: yes. Tc3 transposase. Chain: c. Fragment VNG1438h cluster04 -> 1azsC2 5.7319448 115 / 82 conP: 0.169 CATH-ID: 1.10.400.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG1438h cluster08 -> 1qsaA1 6.4529225 363 / 82 conP: 0.029 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein --end-- VNG1440h one-of-top-five-correct: 0.436456577839037 CThresh: 6.999817 54 best_is: cluster00 VNG1440h cluster00 -> 1e7aA4 9.1542080 86 / 115 conP: 0.453 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1440h cluster01 -> 1ns1A0 6.2302039 73 / 115 conP: 0.279 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re VNG1440h cluster02 -> 1dg3A1 6.3925355 300 / 115 conP: 0.092 CATH-ID: 1.20.1000.10 Interferon-induced guanylate-binding protein 1. Chain: a. Fragment: fu VNG1440h cluster03 -> 1bmtA1 6.4871374 87 / 115 conP: 0.276 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG1440h cluster04 -> 2occC2 8.5660876 191 / 115 conP: 0.270 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG14420 one-of-top-five-correct: 0.312103321972858 CThresh: 2.588681 100 best_is: cluster19 VNG14420 cluster00 -> 1jwyA 6.0222255 753 / 73 conP: 0.001 NO-CATH VNG14420 cluster01 -> 1a3wA1 5.8142472 155 / 73 conP: 0.197 CATH-ID: 3.40.50.50 Pyruvate kinase. Chain: a, b. Biological_unit: tetramer VNG14420 cluster02 -> 1f08A0 5.3186894 148 / 73 conP: 0.186 CATH-ID: 3.30.70.750 Replication protein e1. Chain: a, b. Fragment: DNA-binding domain. Eng VNG14420 cluster03 -> 1bl0A1 5.5958156 56 / 73 conP: 0.374 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG14420 cluster04 -> 1pxtA2 5.3049106 156 / 73 conP: 0.174 CATH-ID: 3.40.47.20 Peroxisomal 3-ketoacyl-coa thiolase VNG14420 cluster19 -> 1fvrA 6.6461605 299 / 73 conP: 0.073 NO-CATH --end-- VNG14421 one-of-top-five-correct: 0.485659822376507 CThresh: 4.836007 75 best_is: cluster05 VNG14421 cluster00 -> 1pah00 6.0595971 308 / 69 conP: 0.029 CATH-ID: 1.10.800.10 Phenylalanine hydroxylase. Chain: null. Fragment: catalytic domain. En VNG14421 cluster01 -> 1cf9A2 7.6473864 121 / 69 conP: 0.241 CATH-ID: 1.10.422.10 Catalase hpii. Chain: a, b, c, d. Engineered: yes. Mutation: yes VNG14421 cluster02 -> 1bu2A1 5.9520688 112 / 69 conP: 0.175 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG14421 cluster03 -> 1guxB0 6.8011957 141 / 69 conP: 0.168 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG14421 cluster04 -> 2hmqA0 6.5896480 113 / 69 conP: 0.202 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG14421 cluster05 -> 1ocrE0 9.7628633 109 / 69 conP: 0.397 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG1446h one-of-top-five-correct: 0.393749360024865 CThresh: 5.316504 75 best_is: cluster08 VNG1446h cluster00 -> 1fokA3 6.9415989 178 / 76 conP: 0.139 CATH-ID: 3.40.91.30 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG1446h cluster01 -> 1poxA3 6.3314528 190 / 76 conP: 0.108 CATH-ID: 3.40.50.970 Pyruvate oxidase mutant with pro 178 replaced by ser, ser 188 replaced VNG1446h cluster02 -> 1hc7A 5.7150714 464 / 76 conP: 0.008 NO-CATH VNG1446h cluster03 -> 1eemA2 5.9299298 115 / 76 conP: 0.177 CATH-ID: 1.20.1050.10 Glutathione-s-transferase. Chain: a. Engineered: yes VNG1446h cluster04 -> 1l5vA 5.6227010 796 / 76 conP: 0.000 NO-CATH VNG1446h cluster08 -> 1avqA0 8.7969785 228 / 76 conP: 0.148 CATH-ID: 3.90.320.10 Lambda exonuclease. Chain: a, b, c. Synonym: red alpha. Engineered: ye --end-- VNG1448h one-of-top-five-correct: 0.352753567308776 CThresh: 4.379851 75 best_is: cluster00 VNG1448h cluster00 -> 1epaA0 7.8465464 160 / 78 conP: 0.243 CATH-ID: 2.40.128.20 Epididymal retinoic acid-binding protein (androgen dependent secretory VNG1448h cluster01 -> 1a1s01 7.4863919 152 / 78 conP: 0.237 CATH-ID: 3.40.50.1370 Ornithine carbamoyltransferase. Chain: null. Synonym: ornithine transc VNG1448h cluster02 -> 2dri01 6.4736947 125 / 78 conP: 0.228 CATH-ID: 3.40.50.2900 D-ribose-binding protein complexed with beta-d-ribose VNG1448h cluster03 -> 2dri01 6.3705462 125 / 78 conP: 0.223 CATH-ID: 3.40.50.2900 D-ribose-binding protein complexed with beta-d-ribose VNG1448h cluster04 -> 1jmcA2 6.2632853 124 / 78 conP: 0.219 CATH-ID: 2.40.50.10 Replication protein a. Chain: a. Fragment: 70kda DNA-binding subunit, --end-- VNG14551 one-of-top-five-correct: 0.376503812700041 CThresh: 6.997829 40 best_is: cluster07 VNG14551 cluster00 -> 1a0p01 7.2545216 91 / 117 conP: 0.323 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG14551 cluster01 -> 1dik05 7.1951762 89 / 117 conP: 0.322 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG14551 cluster02 -> 1fz1F2 7.8940306 73 / 117 conP: 0.389 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: VNG14551 cluster03 -> 1ncs00 6.5017464 47 / 117 conP: 0.333 CATH-ID: 3.30.160.60 Transcriptional factor swi5. Chain: null. Fragment: zinc finger DNA bi VNG14551 cluster04 -> 1dpe03 6.2846672 219 / 117 conP: 0.143 CATH-ID: 3.10.105.10 Dipeptide-binding protein. Chain: null. Synonym: dipeptide permease VNG14551 cluster07 -> 1dik05 8.4264988 89 / 117 conP: 0.403 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y --end-- VNG1456h one-of-top-five-correct: 0.142016808774663 CThresh: 9.205168 25 best_is: cluster10 VNG1456h cluster00 -> 1isvA 5.5902576 436 / 125 conP: 0.028 NO-CATH VNG1456h cluster01 -> 1dh0A1 4.7615682 270 / 125 conP: 0.054 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes VNG1456h cluster02 -> 1e1aA0 5.6443991 312 / 125 conP: 0.055 CATH-ID: 2.130.10.50 Diisopropylfluorophosphatase. Chain: a. Synonym: dfpase. Engineered: y VNG1456h cluster03 -> 1hsm00 4.3189092 79 / 125 conP: 0.127 CATH-ID: 1.10.30.10 High mobility group protein 1 (hmg1) box 2, complexed with mercaptoeth VNG1456h cluster04 -> 1iku02 5.1163245 92 / 125 conP: 0.145 CATH-ID: 1.10.238.10 Recoverin. Chain: null. Engineered: yes VNG1456h cluster10 -> 1i9yA 5.7023671 336 / 125 conP: 0.049 NO-CATH --end-- VNG1459h one-of-top-five-correct: 0.1847207390843 CThresh: 3.758993 75 best_is: cluster02 VNG1459h cluster00 -> 1grj02 4.3658542 77 / 47 conP: 0.128 CATH-ID: 3.10.70.10 Grea transcript cleavage factor from escherichia coli VNG1459h cluster01 -> 1ekcC0 3.9979589 50 / 47 conP: 0.164 CATH-ID: 4.10.640.10 30s ribosomal protein s6. Chain: a, f. 30s ribosomal protein s15. Chai VNG1459h cluster02 -> 1l9xA 5.8680282 288 / 47 conP: 0.010 NO-CATH VNG1459h cluster03 -> 1hdoA0 4.8404969 205 / 47 conP: 0.024 CATH-ID: 3.40.50.720 Biliverdin ix beta reductase. Chain: a. Synonym: flavin reductase (ec VNG1459h cluster04 -> 1fbxA2 5.0778183 136 / 47 conP: 0.069 CATH-ID: 3.50.11.20 Gtp cyclohydrolase i. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG1461h one-of-top-five-correct: 0.527509956956744 CThresh: 4.291214 75 best_is: cluster19 VNG1461h cluster00 -> 1d1dA1 7.2242911 140 / 69 conP: 0.207 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG1461h cluster01 -> 1dg3A1 8.9912217 300 / 69 conP: 0.079 CATH-ID: 1.20.1000.10 Interferon-induced guanylate-binding protein 1. Chain: a. Fragment: fu VNG1461h cluster02 -> 1glqA2 9.5513156 108 / 69 conP: 0.414 CATH-ID: 1.20.1050.10 Glutathione s-transferase yfyf (class pi) complexed with s-(p-nitroben VNG1461h cluster03 -> 1glqA2 9.1282202 108 / 69 conP: 0.385 CATH-ID: 1.20.1050.10 Glutathione s-transferase yfyf (class pi) complexed with s-(p-nitroben VNG1461h cluster04 -> 1ag200 7.2242911 103 / 69 conP: 0.276 CATH-ID: 1.10.790.10 Major prion protein. Chain: null. Fragment: domain 121 - 231. Synonym: VNG1461h cluster19 -> 1bgf00 9.9744109 124 / 69 conP: 0.405 CATH-ID: 1.10.532.10 Stat-4. Chain: null. Fragment: n-terminal domain. Engineered: yes. Bio --end-- VNG14622 one-of-top-five-correct: 0.383467226191345 CThresh: 5.836915 75 best_is: cluster09 VNG14622 cluster00 -> 1uaaA4 6.8335586 162 / 109 conP: 0.240 CATH-ID: 1.10.486.10 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG14622 cluster01 -> 1yrnA0 7.3290605 49 / 109 conP: 0.430 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG14622 cluster02 -> 1akhB0 7.2825408 78 / 109 conP: 0.382 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG14622 cluster03 -> 1a0p01 7.5293592 91 / 109 conP: 0.379 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG14622 cluster04 -> 1yrnA0 7.3290605 49 / 109 conP: 0.430 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG14622 cluster09 -> 1rpjA1 8.1630899 139 / 109 conP: 0.350 CATH-ID: 3.40.50.8600 Precursor of periplasmic sugar receptor. Chain: a. Synonym: albp. Biol --end-- VNG14642 one-of-top-five-correct: 0.435647414487394 CThresh: 7.185573 25 best_is: cluster11 VNG14642 cluster00 -> 1e2aA0 6.4558222 102 / 116 conP: 0.251 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG14642 cluster01 -> 1a6q02 8.2820295 69 / 116 conP: 0.409 CATH-ID: 1.10.920.10 Phosphatase 2c. Chain: null. Engineered: yes VNG14642 cluster02 -> 1k40A 5.9889929 126 / 116 conP: 0.202 NO-CATH VNG14642 cluster03 -> 2a3dA0 7.7767435 73 / 116 conP: 0.369 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG14642 cluster04 -> 1k04A 6.4790951 142 / 116 conP: 0.210 NO-CATH VNG14642 cluster11 -> 1kehA 9.2066720 683 / 116 conP: 0.022 NO-CATH --end-- VNG14644 one-of-top-five-correct: 0.425789907440356 CThresh: 5.223587 75 best_is: cluster08 VNG14644 cluster00 -> 1moq02 5.7640626 148 / 116 conP: 0.245 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d VNG14644 cluster01 -> 1volA1 7.8253283 97 / 116 conP: 0.444 CATH-ID: 1.10.472.10 Transcription factor iib. Chain: a. Fragment: residues 113 - 316. Engi VNG14644 cluster02 -> 1amoA4 8.0559927 160 / 116 conP: 0.369 CATH-ID: 3.40.50.80 NADPH-cytochrome p450 reductase. Chain: a, b. Fragment: hydrophilic do VNG14644 cluster03 -> 1yrnA0 7.0946598 49 / 116 conP: 0.464 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG14644 cluster04 -> 1e7aA2 6.3995012 90 / 116 conP: 0.356 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG14644 cluster08 -> 1k3fA 8.2068318 253 / 116 conP: 0.258 NO-CATH --end-- VNG1466h one-of-top-five-correct: 0.230814348837388 CThresh: 2.713016 100 best_is: cluster02 VNG1466h cluster00 -> 1pysB6 6.2539125 96 / 43 conP: 0.170 CATH-ID: 3.30.70.380 Phenylalanyl-tRNA synthetase. Chain: a, b. Biological_unit: tetramer o VNG1466h cluster01 -> 1f0kA2 4.5483231 176 / 43 conP: 0.033 CATH-ID: 3.40.50.2000 Udp-n-acetylglucosamine-n-acetylmuramyl- (pentapeptide) pyrophosphoryl VNG1466h cluster02 -> 1d09B1 6.2539125 93 / 43 conP: 0.177 CATH-ID: 3.30.70.140 Aspartate carbamoyltransferase catalytic chain. Chain: a, c. Engineere VNG1466h cluster03 -> 1apyB0 5.2792900 141 / 43 conP: 0.069 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG1466h cluster04 -> 1l8bA 5.7666012 177 / 43 conP: 0.046 NO-CATH --end-- VNG1468h one-of-top-five-correct: 0.295009682320859 CThresh: 6.841115 75 best_is: cluster13 VNG1468h cluster00 -> 1kpsB 7.8222863 156 / 88 conP: 0.192 NO-CATH VNG1468h cluster01 -> 1agsA 6.5431238 221 / 88 conP: 0.089 NO-CATH VNG1468h cluster02 -> 1a28A0 5.9361600 251 / 88 conP: 0.061 CATH-ID: 1.10.565.10 Progesterone receptor. Chain: a, b. Fragment: ligand binding domain. E VNG1468h cluster03 -> 1a9100 7.9257221 79 / 88 conP: 0.311 CATH-ID: 1.20.20.10 F1fo atpase subunit c. Chain: null. Synonym: proteolipid, dccd-binding VNG1468h cluster04 -> 1bucA3 5.3639700 141 / 88 conP: 0.116 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG1468h cluster13 -> 1cb5A 8.0117369 453 / 88 conP: 0.023 NO-CATH --end-- VNG14722 one-of-top-five-correct: 0.56633315603734 CThresh: 5.524965 75 best_is: cluster05 VNG14722 cluster00 -> 1eqfA1 7.7041454 142 / 104 conP: 0.315 CATH-ID: 1.20.920.10 RNA polymerase ii transcription initiation factor. Chain: a. Fragment: VNG14722 cluster01 -> 1i27A0 6.3348410 73 / 104 conP: 0.330 CATH-ID: 1.10.10.10 Transcription factor iif. Chain: a. Fragment: rap74 subunit, c-termina VNG14722 cluster02 -> 2a3dA0 9.3581913 73 / 104 conP: 0.540 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG14722 cluster03 -> 1wjbA0 5.6000706 55 / 104 conP: 0.310 CATH-ID: 1.10.10.200 HIV-1 integrase. Chain: a, b VNG14722 cluster04 -> 1fipA0 6.3120266 73 / 104 conP: 0.328 CATH-ID: 1.10.1230.10 Fis protein (factor for inversion stimulation) mutant with pro 61 repl VNG14722 cluster05 -> 2a3dA0 10.166092 73 / 104 conP: 0.598 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG1473h one-of-top-five-correct: 0.491190486475896 CThresh: 4.263899 75 best_is: cluster18 VNG1473h cluster00 -> 1jjuA 7.9789722 489 / 81 conP: 0.021 NO-CATH VNG1473h cluster01 -> 1acf00 6.1824125 125 / 81 conP: 0.229 CATH-ID: 3.30.450.30 Profilin i VNG1473h cluster02 -> 1e4wH 6.8741558 209 / 81 conP: 0.149 NO-CATH VNG1473h cluster03 -> 1jjuA 6.9713070 489 / 81 conP: 0.016 NO-CATH VNG1473h cluster04 -> 1jjuA 6.9713070 489 / 81 conP: 0.016 NO-CATH VNG1473h cluster18 -> 1ospO1 9.2907568 73 / 81 conP: 0.533 CATH-ID: 2.30.70.11 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os --end-- VNG1479h one-of-top-five-correct: 0.307272803759461 CThresh: 4.385656 75 best_is: cluster00 VNG1479h cluster00 -> 1qhaA2 7.7408056 261 / 58 conP: 0.047 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG1479h cluster01 -> 1ala01 5.7914965 73 / 58 conP: 0.212 CATH-ID: 1.10.220.10 Annexin v VNG1479h cluster02 -> 1ddbA0 7.0721368 195 / 58 conP: 0.082 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG1479h cluster03 -> 1lddA 7.0721368 74 / 58 conP: 0.278 NO-CATH VNG1479h cluster04 -> 1lddA 6.1805783 74 / 58 conP: 0.229 NO-CATH --end-- VNG1480c one-of-top-five-correct: 0.734713807400959 CThresh: 6.128215 75 best_is: cluster06 VNG1480c cluster00 -> 1jud01 10.658273 145 / 126 conP: 0.559 CATH-ID: 3.40.50.1000 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG1480c cluster01 -> 1b5tA0 8.1306661 275 / 126 conP: 0.229 CATH-ID: 3.20.20.220 Methylenetetrahydrofolate reductase. Chain: a, b, c. Engineered: yes VNG1480c cluster02 -> 2scpA0 6.5629428 174 / 126 conP: 0.249 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein VNG1480c cluster03 -> 1gsoA1 8.6505476 94 / 126 conP: 0.485 CATH-ID: 3.40.50.20 Glycinamide ribonucleotide synthetase. Chain: a. Synonym: purd gen pro VNG1480c cluster04 -> 1aj300 7.0179102 98 / 126 conP: 0.365 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: null. Fragment: 16th repeat, residues 1772 - 18 VNG1480c cluster06 -> 1jud01 11.996729 145 / 126 conP: 0.651 CATH-ID: 3.40.50.1000 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG1486h one-of-top-five-correct: 0.252605429703925 CThresh: 3.423602 75 best_is: cluster16 VNG1486h cluster00 -> 1fnhA1 5.3151537 90 / 52 conP: 0.168 CATH-ID: 2.60.40.30 Fibronectin. Chain: a. Fragment: heparin and integrin binding. Enginee VNG1486h cluster01 -> 1alkA0 3.9334261 449 / 52 conP: 0.001 CATH-ID: 3.40.720.10 Alkaline phosphatase VNG1486h cluster02 -> 1b4bA0 5.7757296 71 / 52 conP: 0.229 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c. Fragment: oligomerization domain, VNG1486h cluster03 -> 1c7sA4 4.9129303 66 / 52 conP: 0.198 CATH-ID: 2.60.40.320 Beta-n-acetylhexosaminidase. Chain: a. Fragment: mature protein, perip VNG1486h cluster04 -> 1b12A1 5.1820575 130 / 52 conP: 0.102 CATH-ID: 2.10.109.10 Signal peptidase i. Chain: a, b, c, d. Fragment: catalytic domain. Syn VNG1486h cluster16 -> 1tif00 6.6968813 76 / 52 conP: 0.266 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid --end-- VNG14880 one-of-top-five-correct: 0.341751457625172 CThresh: 6.489499 75 best_is: cluster13 VNG14880 cluster00 -> 1hsbB0 8.5119990 99 / 80 conP: 0.302 CATH-ID: 2.60.40.10 Class i histocompatibility antigen aw68.1 (leucocyte antigen) VNG14880 cluster01 -> 1f0xA1 6.3996404 100 / 80 conP: 0.189 CATH-ID: 3.30.70.610 D-lactate dehydrogenase. Chain: a, b. Synonym: dldh. Engineered: yes VNG14880 cluster02 -> 1hdmA2 7.5093608 112 / 80 conP: 0.224 CATH-ID: 2.60.40.10 Class ii histocompatibility antigen, m alpha chain. Chain: a. Fragment VNG14880 cluster03 -> 1ha101 6.6019338 85 / 80 conP: 0.220 CATH-ID: 3.30.70.330 Hnrnp a1. Chain: null. Fragment: hnrnp a1 (rbd1, rbd2). Synonym: heter VNG14880 cluster04 -> 1jjcA0 6.6019338 266 / 80 conP: 0.055 CATH-ID: 3.40.690.10 Phenylalanyl-tRNA synthetase alpha chain. Chain: a. Fragment: alpha ch VNG14880 cluster13 -> 1cvjA2 8.6248678 92 / 80 conP: 0.322 CATH-ID: 3.30.70.330 Polydenylate binding protein 1. Chain: a, b, c, d, e, f, g, h. Fragmen --end-- VNG14881 one-of-top-five-correct: 0.484486102272414 CThresh: 6.171644 75 best_is: cluster02 VNG14881 cluster00 -> 1an4A0 5.0297661 65 / 120 conP: 0.267 CATH-ID: 4.10.280.10 Usf. Chain: a, b. Fragment: b/hlh DNA binding domain. Synonym: upstrea VNG14881 cluster01 -> 1fmtA1 6.5785565 202 / 120 conP: 0.204 CATH-ID: 3.40.50.170 Methionyl-tRNA fmet formyltransferase. Chain: a, b. Synonym: 10-formyl VNG14881 cluster02 -> 1d9eA0 9.1944343 266 / 120 conP: 0.272 CATH-ID: 3.20.20.280 3-deoxy-d-manno-octulosonate 8-phosphate synthase. Chain: a, b, c, d. VNG14881 cluster03 -> 1d3gA0 7.1088777 360 / 120 conP: 0.106 CATH-ID: 3.20.20.90 Dihydroorotate dehydrogenase. Chain: a. Engineered: yes VNG14881 cluster04 -> 1b0pA6 5.9163080 385 / 120 conP: 0.068 CATH-ID: 3.40.50.970 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo --end-- VNG1490h one-of-top-five-correct: 0.368065305013568 CThresh: 8.125699 25 best_is: cluster16 VNG1490h cluster00 -> 1ytfD1 5.5001509 53 / 133 conP: 0.245 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG1490h cluster01 -> 1ku3A 6.3230815 61 / 133 conP: 0.282 NO-CATH VNG1490h cluster02 -> 1furA3 6.2363054 52 / 133 conP: 0.287 CATH-ID: 1.10.40.30 FumarasE C. Chain: a, b. Synonym: fumc. Engineered: yes. Mutation: h18 VNG1490h cluster03 -> 153l00 5.6462326 185 / 133 conP: 0.144 CATH-ID: 1.10.530.10 Lysozyme VNG1490h cluster04 -> 1qo0D2 6.0814600 46 / 133 conP: 0.284 CATH-ID: 1.10.15.10 Amic. Chain: a, b. Fragment: amide receptor. Engineered: yes. Other_de VNG1490h cluster16 -> 2a3dA0 8.4748166 73 / 133 conP: 0.407 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG15014 one-of-top-five-correct: 0.317742301696644 CThresh: 4.099286 75 best_is: cluster03 VNG15014 cluster00 -> 1b5dA0 5.2809413 246 / 64 conP: 0.041 CATH-ID: 3.30.572.10 Deoxycytidylate hydroxymethylase. Chain: a, b. Synonym: deoxycytidylat VNG15014 cluster01 -> 1fc5A 5.7214313 397 / 64 conP: 0.009 NO-CATH VNG15014 cluster02 -> 1g8tB0 6.1465287 241 / 64 conP: 0.054 CATH-ID: 3.40.570.10 Nuclease sm2 isoform. Chain: a, b. Engineered: yes. Other_details: mg VNG15014 cluster03 -> 1avaA1 7.6077225 345 / 64 conP: 0.027 CATH-ID: 3.20.20.80 Barley alpha-amylase 2(cv menuet). Chain: a, b. Synonym: amy2. Enginee VNG15014 cluster04 -> 1di2A0 6.5835505 69 / 64 conP: 0.299 CATH-ID: 3.30.160.20 Double stranded RNA binding protein a. Chain: a, b. Fragment: second d --end-- VNG15050 one-of-top-five-correct: 0.539138226007415 CThresh: 6.135246 75 best_is: cluster00 VNG15050 cluster00 -> 1ljwA 9.4585292 141 / 134 conP: 0.503 NO-CATH VNG15050 cluster01 -> 1ytfD1 6.6450636 53 / 134 conP: 0.416 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG15050 cluster02 -> 1kdxA0 6.7697739 81 / 134 conP: 0.389 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG15050 cluster03 -> 1ad3A1 7.0333359 247 / 134 conP: 0.224 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase (class 3). Chain: a, b. Synonym: aldh. Engineer VNG15050 cluster04 -> 1c9bA2 7.6476250 106 / 134 conP: 0.419 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te --end-- VNG15100 one-of-top-five-correct: 0.660162562422249 CThresh: 2.981764 100 best_is: cluster12 VNG15100 cluster00 -> 1bwoA0 7.5404154 90 / 73 conP: 0.409 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 VNG15100 cluster01 -> 1fjgT0 6.6461605 99 / 73 conP: 0.329 CATH-TRUNC VNG15100 cluster02 -> 1om2A0 8.1887157 95 / 73 conP: 0.443 CATH-ID: 1.20.960.10 Mitochondrial import receptor subunit tom20. Chain: a. Fragment: resid VNG15100 cluster03 -> 1efyA1 6.7468132 136 / 73 conP: 0.261 CATH-ID: 1.20.142.10 Poly (adp-ribose) polymerase. Chain: a. Fragment: catalytic fragment. VNG15100 cluster04 -> 1he8A3 10.181792 111 / 73 conP: 0.547 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony VNG15100 cluster12 -> 1dceA1 10.805727 317 / 73 conP: 0.167 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg --end-- VNG15102 one-of-top-five-correct: 0.309026689091891 CThresh: 3.414843 75 best_is: cluster15 VNG15102 cluster00 -> 1mxa03 6.8977153 106 / 57 conP: 0.231 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met VNG15102 cluster01 -> 1ha101 6.7576033 85 / 57 conP: 0.272 CATH-ID: 3.30.70.330 Hnrnp a1. Chain: null. Fragment: hnrnp a1 (rbd1, rbd2). Synonym: heter VNG15102 cluster02 -> 1euvB0 6.2255530 79 / 57 conP: 0.257 CATH-ID: 3.10.20.40 Ulp1 protease. Chain: a. Fragment: c-terminal protease domain. Enginee VNG15102 cluster03 -> 1jjcA0 6.0014989 266 / 57 conP: 0.032 CATH-ID: 3.40.690.10 Phenylalanyl-tRNA synthetase alpha chain. Chain: a. Fragment: alpha ch VNG15102 cluster04 -> 1ris00 6.8977153 97 / 57 conP: 0.252 CATH-ID: 3.30.70.60 Ribosomal protein s6 VNG15102 cluster15 -> 1eomA0 7.3458234 283 / 57 conP: 0.037 CATH-ID: 3.20.20.80 Endo-beta-n-acetylglucosaminidase f3. Chain: a. Engineered: yes --end-- VNG15103 one-of-top-five-correct: 0.358798736739224 CThresh: 6.997005 50 best_is: cluster18 VNG15103 cluster00 -> 2scuB1 5.0526797 155 / 113 conP: 0.140 CATH-ID: 3.30.470.20 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG15103 cluster01 -> 1augA0 4.9337288 210 / 113 conP: 0.100 CATH-ID: 3.40.630.20 Pyroglutamyl peptidase-1. Chain: a, b, c, d. Synonym: pgp-1, pyrrolido VNG15103 cluster02 -> 1fruA1 4.5232729 177 / 113 conP: 0.108 CATH-ID: 3.30.500.10 Fc (igg) receptor (neonatal) (orthorhombic crystal form) (fcrn) (extra VNG15103 cluster03 -> 1dik06 5.6865579 98 / 113 conP: 0.217 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG15103 cluster04 -> 1fgxA0 7.3156185 272 / 113 conP: 0.131 CATH-ID: 3.90.550.20 Beta 1,4 galactosyltransferase. Chain: a, b. Fragment: catalytic domai VNG15103 cluster18 -> 1bxgB1 8.3086940 131 / 113 conP: 0.325 CATH-ID: 3.40.192.10 Phenylalanine dehydrogenase. Chain: a, b. Engineered: yes. Biological_ --end-- VNG15110 one-of-top-five-correct: 0.306560999940521 CThresh: 6.997737 54 best_is: cluster14 VNG15110 cluster00 -> 1epaA0 5.2490972 160 / 115 conP: 0.146 CATH-ID: 2.40.128.20 Epididymal retinoic acid-binding protein (androgen dependent secretory VNG15110 cluster01 -> 1ei5A3 5.1885844 102 / 115 conP: 0.194 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG15110 cluster02 -> 1znbA0 5.8453150 228 / 115 conP: 0.119 CATH-ID: 3.60.15.10 Metallo-beta-lactamase. Chain: a, b. Synonym: class b beta-lactamase. VNG15110 cluster03 -> 1epaA0 5.4066358 160 / 115 conP: 0.152 CATH-ID: 2.40.128.20 Epididymal retinoic acid-binding protein (androgen dependent secretory VNG15110 cluster04 -> 1ep2A0 6.5736648 305 / 115 conP: 0.094 CATH-ID: 3.20.20.90 Dihydroorotate dehydrogenase b (pyrd subunit). Chain: a. Engineered: y VNG15110 cluster14 -> 1ei5A3 7.6183384 102 / 115 conP: 0.326 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes --end-- VNG15111 one-of-top-five-correct: 0.141892265583093 CThresh: 6.987730 65 best_is: cluster12 VNG15111 cluster00 -> 1pjr04 5.3544058 140 / 68 conP: 0.075 CATH-ID: 1.10.486.10 Pcra. Chain: null. Engineered: yes VNG15111 cluster01 -> 1tca00 4.0795187 317 / 68 conP: 0.009 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) VNG15111 cluster02 -> 1azsC2 5.6695995 115 / 68 conP: 0.103 CATH-ID: 1.10.400.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG15111 cluster03 -> 1lmb30 4.9294435 87 / 68 conP: 0.110 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG15111 cluster04 -> 1iibA0 4.2026702 103 / 68 conP: 0.078 CATH-ID: 3.40.50.270 Enzyme iib of the cellobiose-specific phosphotransferase system. Chain VNG15111 cluster12 -> 1qgvA0 5.9918494 130 / 68 conP: 0.097 CATH-ID: 3.40.30.10 Spliceosomal protein u5-15kd. Chain: a. Fragment: full-length. Enginee --end-- VNG15112 one-of-top-five-correct: 0.30162363897863 CThresh: 6.951581 75 best_is: cluster19 VNG15112 cluster00 -> 1e2tA2 5.1665130 115 / 110 conP: 0.172 CATH-ID: 2.40.128.40 N-hydroxyarylamine o-acetyltransferase. Chain: a, b, c, d, e, f, g, h. VNG15112 cluster01 -> 1a9xA2 5.3769028 217 / 110 conP: 0.104 CATH-ID: 3.30.470.20 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG15112 cluster02 -> 1p32A0 6.4438702 182 / 110 conP: 0.164 CATH-ID: 3.10.280.10 Mitochondrial matrix protein, sf2p32. Chain: a, b, c. Mutation: l74m VNG15112 cluster03 -> 1bebA0 4.9259429 156 / 110 conP: 0.130 CATH-ID: 2.40.128.20 Beta-lactoglobulin. Chain: a, b. Biological_unit: predominantly dimeri VNG15112 cluster04 -> 1l0wA 5.7768953 580 / 110 conP: 0.013 NO-CATH VNG15112 cluster19 -> 1bovA0 7.6473864 69 / 110 conP: 0.363 CATH-ID: 2.40.50.70 Verotoxin-1 (b-oligomer, also called shiga-like toxin-1) --end-- VNG1513h one-of-top-five-correct: 0.244948643544053 CThresh: 4.994425 75 best_is: cluster11 VNG1513h cluster00 -> 1ltm_ 5.3895366 309 / 77 conP: 0.033 NO-CATH VNG1513h cluster01 -> 1jmcA2 4.9229114 124 / 77 conP: 0.140 CATH-ID: 2.40.50.10 Replication protein a. Chain: a. Fragment: 70kda DNA-binding subunit, VNG1513h cluster02 -> 1tca00 5.2738367 317 / 77 conP: 0.030 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) VNG1513h cluster03 -> 1e0bA0 6.3648104 61 / 77 conP: 0.304 CATH-ID: 2.40.50.40 Swi6 protein. Chain: a, b. Fragment: chromo shadow domain. Engineered: VNG1513h cluster04 -> 1hfh01 5.0280496 62 / 77 conP: 0.228 CATH-ID: 2.10.70.10 Factor h, 15th and 16th c-module pair (nmr, minimized averaged structu VNG1513h cluster11 -> 1qu6A2 6.7278408 76 / 77 conP: 0.297 CATH-ID: 3.30.160.20 Protein kinase pkr. Chain: a. Fragment: dsrna-binding n-terminal domai --end-- VNG1519h one-of-top-five-correct: 0.402171250940646 CThresh: 3.671048 75 best_is: cluster18 VNG1519h cluster00 -> 1dv0A0 6.6181316 45 / 68 conP: 0.395 CATH-ID: 1.10.8.10 DNA repair protein hhr23a. Chain: a. Fragment: uba domain (c-terminal VNG1519h cluster01 -> 1fts01 7.0542554 84 / 68 conP: 0.331 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG1519h cluster02 -> 1jetA3 7.0038279 216 / 68 conP: 0.112 CATH-ID: 3.10.105.10 Oligo-peptide binding protein. Chain: a. Synonym: oppa. Peptide lys al VNG1519h cluster03 -> 1i86A 7.2667366 388 / 68 conP: 0.023 NO-CATH VNG1519h cluster04 -> 1fteA 7.0542554 116 / 68 conP: 0.263 NO-CATH VNG1519h cluster18 -> 4crxA2 8.3291426 111 / 68 conP: 0.352 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog --end-- VNG15201 one-of-top-five-correct: 0.366947338801888 CThresh: 2.695817 100 best_is: cluster13 VNG15201 cluster00 -> 1trkA1 6.2043306 329 / 68 conP: 0.037 CATH-ID: 3.40.50.970 Transketolase VNG15201 cluster01 -> 1e3wA0 6.2043306 251 / 68 conP: 0.080 CATH-ID: 3.40.50.720 Short chain 3-hydroxyacyl-coa dehydrogenase. Chain: a, b, c, d. Synony VNG15201 cluster02 -> 1qqnA4 5.2503097 84 / 68 conP: 0.269 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG15201 cluster03 -> 1dxxA1 7.0542554 113 / 68 conP: 0.314 CATH-ID: 1.10.418.10 Dystrophin. Chain: a, b, c, d. Fragment: actin-binding. Engineered: ye VNG15201 cluster04 -> 1a0b00 4.9499815 117 / 68 conP: 0.193 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG15201 cluster13 -> 1dtwA0 7.4792178 382 / 68 conP: 0.031 CATH-ID: 3.40.50.970 Branched-chain alpha-keto acid dehydrogenase alpha subunit. Chain: a. --end-- VNG15250 one-of-top-five-correct: 0.214078769925376 CThresh: 7.526633 25 best_is: cluster05 VNG15250 cluster00 -> 1a6s00 4.8882685 87 / 100 conP: 0.151 CATH-ID: 1.10.150.90 Gag polyprotein. Chain: null. Fragment: m-domain. Engineered: yes. Mut VNG15250 cluster01 -> 1mhdA0 6.1279075 123 / 100 conP: 0.165 CATH-ID: 3.90.520.10 Smad3. Chain: a, b. Fragment: mh1 domain, residues 1 - 144. Synonym: s VNG15250 cluster02 -> 1ngr00 5.8046598 85 / 100 conP: 0.191 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d VNG15250 cluster03 -> 1c3qA0 6.4105784 272 / 100 conP: 0.070 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG15250 cluster04 -> 1hy1A3 6.4688254 72 / 100 conP: 0.238 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a VNG15250 cluster05 -> 1ytfD1 6.8740461 53 / 100 conP: 0.286 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami --end-- VNG1530h one-of-top-five-correct: 0.293770004167033 CThresh: 6.353999 75 best_is: cluster02 VNG1530h cluster00 -> 1b8fA2 6.0952692 313 / 84 conP: 0.038 CATH-ID: 1.20.200.10 Histidine ammonia-lyase. Chain: a. Synonym: hal, histidase. Engineered VNG1530h cluster01 -> 1rmi_ 6.1833221 160 / 84 conP: 0.128 NO-CATH VNG1530h cluster02 -> 1agsA 7.8655688 221 / 84 conP: 0.125 NO-CATH VNG1530h cluster03 -> 1dkxA2 6.4732133 80 / 84 conP: 0.237 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG1530h cluster04 -> 1b3qA2 6.0716718 174 / 84 conP: 0.112 CATH-ID: 3.30.565.20 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k --end-- VNG15321 one-of-top-five-correct: 0.201947175301389 CThresh: 5.393127 75 best_is: cluster19 VNG15321 cluster00 -> 1jmcA2 4.9622380 124 / 67 conP: 0.106 CATH-ID: 2.40.50.10 Replication protein a. Chain: a. Fragment: 70kda DNA-binding subunit, VNG15321 cluster01 -> 1pkm03 4.3219412 103 / 67 conP: 0.109 CATH-ID: 2.40.33.10 M1 pyruvate kinase. Chain: null. Synonym: pk. Ec: 2.7.1.40 VNG15321 cluster02 -> 1hw7A 6.4562639 229 / 67 conP: 0.057 NO-CATH VNG15321 cluster03 -> 1c8zA0 5.2868738 265 / 67 conP: 0.029 CATH-ID: 3.20.90.10 Tubby protein. Chain: a. Engineered: yes VNG15321 cluster04 -> 1jeyA 6.2428316 493 / 67 conP: 0.004 NO-CATH VNG15321 cluster19 -> 1gdoA0 6.4562639 238 / 67 conP: 0.053 CATH-ID: 3.60.20.10 Glucosamine 6-phosphate synthase. Chain: a, b, c, d. Fragment: glutami --end-- VNG1534h one-of-top-five-correct: 0.272540837192708 CThresh: 2.723556 100 best_is: cluster00 VNG1534h cluster00 -> 1in4A 6.7979811 298 / 46 conP: 0.012 NO-CATH VNG1534h cluster01 -> 1bu2A1 5.3649389 112 / 46 conP: 0.123 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG1534h cluster02 -> 1dik05 4.6484178 89 / 46 conP: 0.139 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG1534h cluster03 -> 1fteA 5.6037793 116 / 46 conP: 0.124 NO-CATH VNG1534h cluster04 -> 1c3uA3 6.0814600 82 / 46 conP: 0.214 CATH-ID: 1.10.164.30 Adenylosuccinate lyase. Chain: a, b. Engineered: yes --end-- VNG15370 one-of-top-five-correct: 0.39039555084529 CThresh: 5.967529 75 best_is: cluster05 VNG15370 cluster00 -> 1abz00 5.3143675 38 / 114 conP: 0.315 CATH-ID: 1.20.860.10 Alpha-t-alpha. Chain: null. Synonym: ata. Engineered: yes. Other_detai VNG15370 cluster01 -> 1akhB0 8.0979451 78 / 114 conP: 0.445 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG15370 cluster02 -> 1gab00 6.0451230 53 / 114 conP: 0.341 CATH-ID: 1.10.8.40 Protein pab. Chain: null. Fragment: albumin-binding domain, residues 2 VNG15370 cluster03 -> 1mpgA3 6.9271692 52 / 114 conP: 0.402 CATH-ID: 1.10.15.10 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine VNG15370 cluster04 -> 1a81A2 5.8969285 45 / 114 conP: 0.342 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG15370 cluster05 -> 1bob03 8.1884300 54 / 114 conP: 0.488 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes --end-- VNG15431 one-of-top-five-correct: 0.207406650491769 CThresh: 6.471907 75 best_is: cluster15 VNG15431 cluster00 -> 1hf2A 4.9903646 196 / 60 conP: 0.032 NO-CATH VNG15431 cluster01 -> 1ignA2 4.7689442 95 / 60 conP: 0.092 CATH-ID: 1.10.10.60 Rap1. Chain: a, b. Fragment: DNA binding domain 353 - 598. Synonym: gr VNG15431 cluster02 -> 1fehA5 4.9903646 211 / 60 conP: 0.027 CATH-ID: 3.40.950.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG15431 cluster03 -> 1vdeA3 5.8729035 109 / 60 conP: 0.106 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes VNG15431 cluster04 -> 1gkjA 4.9903646 509 / 60 conP: 0.001 NO-CATH --end-- VNG15540 one-of-top-five-correct: 0.334713517691134 CThresh: 3.692263 75 best_is: cluster13 VNG15540 cluster00 -> 1dnpA3 7.1217693 181 / 57 conP: 0.107 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG15540 cluster01 -> 1dnpA3 7.5698775 181 / 57 conP: 0.120 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG15540 cluster02 -> 1akhB0 6.7576033 78 / 57 conP: 0.277 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG15540 cluster03 -> 1dnpA3 6.0014989 181 / 57 conP: 0.080 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG15540 cluster04 -> 1jjuA 7.5698775 489 / 57 conP: 0.003 CATH-TRUNC VNG15540 cluster13 -> 1bwoA0 7.7939316 90 / 57 conP: 0.308 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 --end-- VNG15570 one-of-top-five-correct: 0.153263772413649 CThresh: 6.873116 75 best_is: cluster23 VNG15570 cluster00 -> 1dcqA0 5.1362508 276 / 62 conP: 0.014 CATH-ID: 1.25.40.50 Pyk2-associated protein beta. Chain: a. Fragment: arf-gap domain. Engi VNG15570 cluster01 -> 1fwrA0 4.9079506 213 / 62 conP: 0.026 CATH-ID: 3.20.20.90 Kdpg aldolase. Chain: a, b, c. Engineered: yes. Mutation: yes VNG15570 cluster02 -> 1aipC3 4.8132034 53 / 62 conP: 0.136 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG15570 cluster03 -> 1gytC 3.8254150 503 / 62 conP: 0.001 CATH-TRUNC VNG15570 cluster04 -> 1d2fA1 5.3547235 118 / 62 conP: 0.081 CATH-ID: 3.30.70.160 Maly protein. Chain: a, b. Engineered: yes VNG15570 cluster23 -> 1qbhA0 6.3240585 101 / 62 conP: 0.124 CATH-ID: 1.10.1170.10 Inhibitor of apoptosis protein (2mihb/c-iap-1). Chain: a. Engineered: --end-- VNG1558h one-of-top-five-correct: 0.258161023585757 CThresh: 6.641579 75 best_is: cluster11 VNG1558h cluster00 -> 1af500 6.5682409 126 / 81 conP: 0.161 CATH-ID: 3.10.28.10 I-crei. Chain: null. Synonym: DNA endonuclease i-crei. Engineered: yes VNG1558h cluster01 -> 1b3jA1 5.1575096 170 / 81 conP: 0.080 CATH-ID: 3.30.500.10 Mhc class i homolog mic-a. Chain: a. Fragment: extracellular domain, r VNG1558h cluster02 -> 1dhmA0 6.2883315 83 / 81 conP: 0.205 CATH-ID: 3.30.70.330 E2 protein. Chain: a, b. Fragment: DNA-binding domain. Engineered: yes VNG1558h cluster03 -> 1qo6A1 5.0356344 43 / 81 conP: 0.202 CATH-ID: 2.10.70.10 Fibronectin. Chain: a. Fragment: fibronectin type-i and fibronectin ty VNG1558h cluster04 -> 1tml00 6.6785375 286 / 81 conP: 0.047 CATH-ID: 3.20.20.40 Endo-1,4-beta-d-glucanase VNG1558h cluster11 -> 1cnt10 7.5759061 150 / 81 conP: 0.173 CATH-ID: 1.20.120.200 Ciliary neurotrophic factor. Chain: 1, 2, 3, 4. Synonym: cntf. Enginee --end-- VNG15610 one-of-top-five-correct: 0.379865339648122 CThresh: 5.973353 75 best_is: cluster19 VNG15610 cluster00 -> 1ffyA3 6.8072405 254 / 101 conP: 0.123 CATH-ID: 1.10.730.10 Isoleucyl-tRNA synthetase. Chain: a. Synonym: isoleucine--tRNA ligase, VNG15610 cluster01 -> 1c7nA1 5.2251982 164 / 101 conP: 0.142 CATH-ID: 3.30.70.160 Cystalysin. Chain: a, b, c, d, e, f, g, h. Engineered: yes VNG15610 cluster02 -> 1hw5A2 5.7776066 68 / 101 conP: 0.275 CATH-ID: 1.10.10.10 Catabolite gene activator. Chain: a, b. Synonym: camp receptor protein VNG15610 cluster03 -> 1ej5A0 6.6833033 107 / 101 conP: 0.273 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG15610 cluster04 -> 1g8jA 5.6133258 820 / 101 conP: 0.002 NO-CATH VNG15610 cluster19 -> 1gxpA 8.3653471 103 / 101 conP: 0.385 NO-CATH --end-- VNG1562h one-of-top-five-correct: 0.433657950315369 CThresh: 7.599646 25 best_is: cluster06 VNG1562h cluster00 -> 1b3qA1 6.3240585 62 / 122 conP: 0.284 CATH-ID: 1.20.15.220 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG1562h cluster01 -> 1ez0A2 5.8265828 185 / 122 conP: 0.145 CATH-ID: 3.40.309.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG1562h cluster02 -> 1ytbA2 5.7038800 86 / 122 conP: 0.224 CATH-ID: 3.30.310.10 Tata-box binding protein (ytbp) complexed with DNA containing tata-box VNG1562h cluster03 -> 1jud01 5.0685908 145 / 122 conP: 0.147 CATH-ID: 3.40.50.1000 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG1562h cluster04 -> 1bucA3 5.2516318 141 / 122 conP: 0.156 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG1562h cluster06 -> 2ccyA0 9.2356723 127 / 122 conP: 0.388 CATH-ID: 1.20.120.10 Cytochrome c(prime) --end-- VNG15641 one-of-top-five-correct: 0.287037621859097 CThresh: 7.158853 25 best_is: cluster00 VNG15641 cluster00 -> 1igd00 7.5946485 61 / 108 conP: 0.356 CATH-ID: 3.10.20.10 Protein g VNG15641 cluster01 -> 1flgA0 5.0837251 582 / 108 conP: 0.009 CATH-ID: 2.140.10.10 Quinoprotein ethanol dehydrogenase. Chain: a, b VNG15641 cluster02 -> 1b6rA2 6.3761965 223 / 108 conP: 0.120 CATH-ID: 3.30.470.20 N5-carboxyaminoimidazole ribonucleotide synthetase. Chain: a. Synonym: VNG15641 cluster03 -> 2fmr00 4.7149804 65 / 108 conP: 0.190 CATH-ID: 3.30.70.210 Fmr1 protein. Chain: null. Fragment: first kh domain residues 216 - 28 VNG15641 cluster04 -> 1oacA1 6.5119640 80 / 108 conP: 0.264 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 --end-- VNG15651 one-of-top-five-correct: 0.098319206526857 CThresh: 8.908518 25 best_is: cluster03 VNG15651 cluster00 -> 1cfh00 3.5304415 47 / 100 conP: 0.105 CATH-ID: 4.10.750.10 Coagulation factor ix (the gla and aromatic amino acid stack domains f VNG15651 cluster02 -> 1h75A0 3.2138964 76 / 100 conP: 0.080 CATH-ID: 3.40.30.10 Protein nrdh. Chain: a. Engineered: yes VNG15651 cluster03 -> 1d6mA4 4.9944292 127 / 100 conP: 0.092 CATH-ID: 1.10.290.10 DNA topoisomerase iii. Chain: a. Engineered: yes VNG15651 cluster05 -> 1alo01 3.6332851 74 / 100 conP: 0.091 CATH-ID: 3.10.20.30 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG15651 cluster06 -> 1fj2A0 3.2859450 229 / 100 conP: 0.030 CATH-ID: 3.40.50.950 Acyl protein thioesterase 1. Chain: a, b. Engineered: yes --end-- VNG15662 one-of-top-five-correct: 0.477523956522428 CThresh: 3.711305 75 best_is: cluster19 VNG15662 cluster00 -> 1do0A3 7.2885746 109 / 93 conP: 0.394 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes VNG15662 cluster01 -> 1fafA0 7.6515070 79 / 93 conP: 0.475 CATH-ID: 1.20.15.80 Large t antigen. Chain: a. Fragment: n-terminal domain. Engineered: ye VNG15662 cluster02 -> 1do0A3 7.9486505 109 / 93 conP: 0.441 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes VNG15662 cluster03 -> 1geo03 7.3866227 146 / 93 conP: 0.337 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG15662 cluster04 -> 1do0A3 7.5740508 109 / 93 conP: 0.414 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes VNG15662 cluster19 -> 1do0A3 8.6170970 109 / 93 conP: 0.489 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes --end-- VNG15700 one-of-top-five-correct: 0.290711758816032 CThresh: 7.581430 25 best_is: cluster17 VNG15700 cluster00 -> 1azsA0 5.4387997 190 / 117 conP: 0.120 CATH-ID: 3.50.6.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG15700 cluster01 -> 1ytfB0 6.5591408 46 / 117 conP: 0.309 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG15700 cluster02 -> 1ytfB0 5.6037793 46 / 117 conP: 0.253 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG15700 cluster03 -> 1kdxA0 5.6753801 81 / 117 conP: 0.219 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG15700 cluster04 -> 6ldh01 5.8063690 162 / 117 conP: 0.152 CATH-ID: 3.40.50.720 M=4= apo- Lactate dehydrogenase VNG15700 cluster17 -> 1mnmA 7.6303210 85 / 117 conP: 0.325 NO-CATH --end-- VNG15701 one-of-top-five-correct: 0.286257639105148 CThresh: 6.466482 75 best_is: cluster05 VNG15701 cluster00 -> 1ecl01 5.4722192 139 / 99 conP: 0.155 CATH-ID: 3.40.50.140 Escherichia coli topoisomerase i. Domain: amino-terminal 67kda. Synony VNG15701 cluster01 -> 1be100 6.0835648 137 / 99 conP: 0.182 CATH-ID: 3.40.50.280 Glutamate mutase. Chain: null. Fragment: b12-binding subunit. Synonym: VNG15701 cluster02 -> 1jqcA0 6.0410362 340 / 99 conP: 0.050 CATH-ID: 1.10.620.20 Protein r2 of ribonucleotide reductase. Chain: a, b. Synonym: ribonucl VNG15701 cluster03 -> 1e5dA1 7.1231679 143 / 99 conP: 0.223 CATH-ID: 3.40.50.360 Rubredoxin:oxygen oxidoreductase. Chain: a, b VNG15701 cluster04 -> 1atg01 6.4202475 122 / 99 conP: 0.214 CATH-ID: 3.40.190.10 Periplasmic molybdate-binding protein. Chain: null. Synonym: moda VNG15701 cluster05 -> 1be100 7.4751423 137 / 99 conP: 0.249 CATH-ID: 3.40.50.280 Glutamate mutase. Chain: null. Fragment: b12-binding subunit. Synonym: --end-- VNG15721 one-of-top-five-correct: 0.458161406733698 CThresh: 5.027647 75 best_is: cluster10 VNG15721 cluster00 -> 1eyrA0 5.2356214 220 / 87 conP: 0.090 CATH-ID: 3.90.550.30 Cmp-n-acetylneuraminic acid synthetase. Chain: a, b. Synonym: acylneur VNG15721 cluster01 -> 1gab00 5.8191801 53 / 87 conP: 0.311 CATH-ID: 1.10.8.40 Protein pab. Chain: null. Fragment: albumin-binding domain, residues 2 VNG15721 cluster02 -> 1itf00 5.3907857 165 / 87 conP: 0.139 CATH-ID: 1.20.120.210 Interferon alpha-2a. Chain: null. Engineered: yes. Biological_unit: mo VNG15721 cluster03 -> 1qnf02 6.1796227 123 / 87 conP: 0.222 CATH-ID: 1.25.40.80 Photolyase. Chain: null. Synonym: DNA cyclobutane dipyrimidine photoly VNG15721 cluster04 -> 1ytfB0 5.4474831 46 / 87 conP: 0.300 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG15721 cluster10 -> 1jslA 9.1377617 324 / 87 conP: 0.117 NO-CATH --end-- VNG15731 one-of-top-five-correct: 0.205451975411622 CThresh: 4.596264 75 best_is: cluster14 VNG15731 cluster00 -> 1d0nA5 5.3602307 96 / 51 conP: 0.123 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG15731 cluster01 -> 1aqt01 4.2021050 88 / 51 conP: 0.100 CATH-ID: 2.60.15.10 Atp synthase. Chain: null. Fragment: epsilon chain. Engineered: yes. M VNG15731 cluster02 -> 1qsaA1 5.3602307 363 / 51 conP: 0.004 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG15731 cluster03 -> 1hg3A0 5.8234810 224 / 51 conP: 0.027 CATH-ID: 3.20.20.90 Triosephosphate isomerase. Chain: a, b, c, d, e, f, g, h. Engineered: VNG15731 cluster04 -> 1spbP0 6.0551062 71 / 51 conP: 0.194 CATH-ID: 3.30.70.80 Subtilisin bpn' prosegment. Chain: p. Synonym: subtilisin bpn' propept VNG15731 cluster14 -> 1tif00 6.5183565 76 / 51 conP: 0.204 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid --end-- VNG15850 one-of-top-five-correct: 0.410888980173239 CThresh: 6.993477 48 best_is: cluster04 VNG15850 cluster00 -> 1aoiD0 6.3307015 99 / 116 conP: 0.256 CATH-ID: 1.10.20.10 Histone h3. Chain: a, e. Engineered: yes. Histone h4. Chain: b, f. Eng VNG15850 cluster01 -> 1e7aA4 6.3208997 86 / 116 conP: 0.271 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG15850 cluster02 -> 2hts00 6.3071640 88 / 116 conP: 0.268 CATH-ID: 1.10.10.10 Heat shock transcription factor (DNA binding domain) VNG15850 cluster03 -> 1e17A0 6.7153704 90 / 116 conP: 0.289 CATH-ID: 1.10.10.10 Afx. Chain: a. Fragment: DNA binding domain. Engineered: yes VNG15850 cluster04 -> 1hyp00 8.8418408 75 / 116 conP: 0.451 CATH-ID: 1.10.110.10 Hydrophobic protein from soybean --end-- VNG15870 one-of-top-five-correct: 0.430819767793721 CThresh: 5.108600 75 best_is: cluster03 VNG15870 cluster00 -> 1tca00 6.0594342 317 / 78 conP: 0.038 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) VNG15870 cluster01 -> 1ej5A0 7.6902430 107 / 78 conP: 0.295 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG15870 cluster02 -> 1cb5A 6.4671364 453 / 78 conP: 0.013 NO-CATH VNG15870 cluster03 -> 1c9bA2 9.0761941 106 / 78 conP: 0.387 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG15870 cluster04 -> 1ebfA2 5.8555831 175 / 78 conP: 0.118 CATH-ID: 3.90.750.10 Homoserine dehydrogenase. Chain: a, b. Engineered: yes --end-- VNG1589c one-of-top-five-correct: 0.22326464478181 CThresh: 9.652619 25 best_is: cluster12 VNG1589c cluster00 -> 2lbp01 5.1273801 201 / 136 conP: 0.090 CATH-ID: 3.40.50.3700 Leucine-binding protein ( LBP ) VNG1589c cluster01 -> 1bk6A0 4.2382733 422 / 136 conP: 0.024 CATH-ID: 1.25.30.10 Karyopherin alpha. Chain: a, b. Fragment: armadillo domain. Synonym: i VNG1589c cluster02 -> 1ctf00 5.3418721 68 / 136 conP: 0.172 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG1589c cluster03 -> 1rdr03 3.8218762 81 / 136 conP: 0.112 CATH-ID: 1.20.960.20 Poliovirus 3d polymerase. Chain: null. Engineered: yes VNG1589c cluster04 -> 1aa7A2 4.8266224 78 / 136 conP: 0.146 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG1589c cluster12 -> 1a6s00 7.1656691 87 / 136 conP: 0.242 CATH-ID: 1.10.150.90 Gag polyprotein. Chain: null. Fragment: m-domain. Engineered: yes. Mut --end-- VNG1590h one-of-top-five-correct: 0.215890537362769 CThresh: 6.996315 66 best_is: cluster07 VNG1590h cluster00 -> 1eg9A1 6.7396494 318 / 88 conP: 0.044 CATH-ID: 3.90.380.10 Naphthalene 1,2-dioxygenase alpha subunit. Chain: a. Engineered: yes. VNG1590h cluster01 -> 1bk6A0 6.8474450 422 / 88 conP: 0.020 CATH-ID: 1.25.30.10 Karyopherin alpha. Chain: a, b. Fragment: armadillo domain. Synonym: i VNG1590h cluster02 -> 1inp01 5.7897824 47 / 88 conP: 0.233 CATH-ID: 4.10.460.10 Inositol polyphosphate 1-phosphatase (1-ptase) (inositol-1,4-bisphosph VNG1590h cluster03 -> 1be3C0 5.7096999 378 / 88 conP: 0.021 CATH-ID: 1.20.810.10 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG1590h cluster04 -> 1rypH0 5.6776355 205 / 88 conP: 0.077 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG1590h cluster07 -> 1eq6A0 6.9361750 189 / 88 conP: 0.120 CATH-ID: 3.40.1000.10 Mog1p. Chain: a. Fragment: residues 30-218. Engineered: yes --end-- VNG1591h one-of-top-five-correct: 0.217750969066529 CThresh: 3.857972 75 best_is: cluster10 VNG1591h cluster00 -> 1qqnA4 6.0463047 84 / 56 conP: 0.214 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG1591h cluster01 -> 1dh0A1 4.6948373 270 / 56 conP: 0.018 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes VNG1591h cluster02 -> 4kbpA2 5.4693737 310 / 56 conP: 0.013 CATH-ID: 3.60.21.10 Purple acid phosphatase. Chain: a, b, c, d. Other_details: 111kda dime VNG1591h cluster03 -> 1cfb01 5.3420842 99 / 56 conP: 0.156 CATH-ID: 2.60.40.30 Drosophila neuroglian (chymotryptic fragment containing the two amino VNG1591h cluster04 -> 1kvdB0 5.1453265 77 / 56 conP: 0.186 CATH-ID: 3.30.44.10 Smk toxin. Chain: a, b, c, d. Fragment: chain a and c are residues 19 VNG1591h cluster10 -> 1qniA1 6.2715493 451 / 56 conP: 0.003 CATH-ID: 2.130.10.20 Nitrous-oxide reductase. Chain: a, b, c, d, e, f --end-- VNG15920 one-of-top-five-correct: 0.590201494169208 CThresh: 6.989563 56 best_is: cluster10 VNG15920 cluster00 -> 1hrkA 7.3280486 359 / 107 conP: 0.070 CATH-TRUNC VNG15920 cluster01 -> 1ew6A0 8.4376827 137 / 107 conP: 0.306 CATH-ID: 1.10.490.10 Dehaloperoxidase. Chain: a, b VNG15920 cluster02 -> 1nkl00 7.0786897 78 / 107 conP: 0.305 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG15920 cluster03 -> 1uaaA2 6.8162340 74 / 107 conP: 0.294 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG15920 cluster04 -> 1a0p01 6.3118180 91 / 107 conP: 0.244 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG15920 cluster10 -> 1dn1B0 11.029978 222 / 107 conP: 0.348 CATH-ID: 1.20.1050.30 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. --end-- VNG15921 one-of-top-five-correct: 0.402007947820964 CThresh: 2.550691 100 best_is: cluster10 VNG15921 cluster00 -> 1cuk03 6.4458751 48 / 72 conP: 0.451 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes VNG15921 cluster01 -> 1wer02 5.7493496 148 / 72 conP: 0.202 CATH-ID: 1.10.494.10 P120gap. Chain: null. Fragment: catalytic domain, residues 714 - 1047. VNG15921 cluster02 -> 1fbnA0 6.2661790 225 / 72 conP: 0.122 CATH-ID: 3.40.50.150 Mj fibrillarin homologue. Chain: a. Engineered: yes VNG15921 cluster03 -> 1sly03 7.1015669 173 / 72 conP: 0.227 CATH-ID: 1.10.530.10 70-kda soluble lytic transglycosylase. Chain: null. Synonym: slt70, ex VNG15921 cluster04 -> 1a0b00 6.4750260 117 / 72 conP: 0.297 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG15921 cluster10 -> 1a0b00 7.7281079 117 / 72 conP: 0.378 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment --end-- VNG1598h one-of-top-five-correct: 0.424115261510534 CThresh: 3.201109 75 best_is: cluster01 VNG1598h cluster00 -> 3daaA1 6.7613687 118 / 70 conP: 0.273 CATH-ID: 3.30.470.10 D-amino acid aminotransferase. Chain: a, b. Engineered: yes. Biologica VNG1598h cluster01 -> 1he8A3 8.3182948 111 / 70 conP: 0.386 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony VNG1598h cluster02 -> 1azsA0 6.5507375 190 / 70 conP: 0.147 CATH-ID: 3.50.6.10 Vc1. Chain: a. Fragment: c1a domain of adenylyl cyclase. Engineered: y VNG1598h cluster03 -> 1utg00 7.2429142 70 / 70 conP: 0.410 CATH-ID: 1.10.210.10 Uteroglobin (oxidized) VNG1598h cluster04 -> 1t7pA3 6.3401063 178 / 70 conP: 0.154 CATH-ID: 3.30.70.370 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi --end-- VNG16160 one-of-top-five-correct: 0.428938336620146 CThresh: 0.988180 100 best_is: cluster11 VNG16160 cluster00 -> 1b0nA0 6.5944764 103 / 54 conP: 0.311 CATH-ID: 1.10.260.10 Sinr protein. Chain: a. Engineered: yes. Sini protein. Chain: b. Engin VNG16160 cluster01 -> 1qcnA 7.2775994 400 / 54 conP: 0.012 NO-CATH VNG16160 cluster02 -> 1b0nA0 6.5944764 103 / 54 conP: 0.311 CATH-ID: 1.10.260.10 Sinr protein. Chain: a. Engineered: yes. Sini protein. Chain: b. Engin VNG16160 cluster03 -> 1qqjA 7.0498917 416 / 54 conP: 0.009 NO-CATH VNG16160 cluster04 -> 1b0nA0 7.0498917 103 / 54 conP: 0.340 CATH-ID: 1.10.260.10 Sinr protein. Chain: a. Engineered: yes. Sini protein. Chain: b. Engin VNG16160 cluster11 -> 1qcnA 7.7330147 400 / 54 conP: 0.013 NO-CATH --end-- VNG16161 one-of-top-five-correct: 0.463468045058867 CThresh: 5.705726 75 best_is: cluster12 VNG16161 cluster00 -> 1fokA3 7.4943164 178 / 102 conP: 0.239 CATH-ID: 3.40.91.30 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG16161 cluster01 -> 2hdhA1 6.8385689 193 / 102 conP: 0.190 CATH-ID: 3.40.50.720 L-3-hydroxyacyl coa dehydrogenase. Chain: a, b. Synonym: schad. Engine VNG16161 cluster02 -> 1dv7A0 7.0448309 212 / 102 conP: 0.179 CATH-ID: 3.20.20.90 Orotidine 5'-phosphate decarboxylase. Chain: a. Synonym: ompdecase. En VNG16161 cluster03 -> 1evyA 7.4684223 346 / 102 conP: 0.089 NO-CATH VNG16161 cluster04 -> 1b5400 7.8649550 230 / 102 conP: 0.196 CATH-ID: 3.20.20.10 Yeast hypothetical protein. Chain: null. Engineered: yes. Biological_u VNG16161 cluster12 -> 1ofgA1 9.1621903 170 / 102 conP: 0.349 CATH-ID: 3.40.50.720 Glucose-fructose oxidoreductase. Chain: a, b, c, d, e, f. Ec: 1.1.99.2 --end-- VNG16260 one-of-top-five-correct: 0.528539079185136 CThresh: 3.333353 75 best_is: cluster05 VNG16260 cluster00 -> 1pbe01 7.3026341 231 / 69 conP: 0.117 CATH-ID: 3.50.50.60 P-hydroxybenzoate hydroxylase (phbh) complexed with p-hydroxybenzoic a VNG16260 cluster01 -> 1a6dA1 8.7051248 244 / 69 conP: 0.148 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer VNG16260 cluster02 -> 1mroB2 8.7051248 295 / 69 conP: 0.094 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG16260 cluster03 -> 1jgiA 8.7051248 628 / 69 conP: 0.004 NO-CATH VNG16260 cluster04 -> 1jkw02 6.7810521 101 / 69 conP: 0.298 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG16260 cluster05 -> 1mroB2 9.5513156 295 / 69 conP: 0.116 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: --end-- VNG16261 one-of-top-five-correct: 0.722313018585133 CThresh: 7.028958 25 best_is: cluster08 VNG16261 cluster00 -> 1lre00 6.5682409 81 / 126 conP: 0.312 CATH-ID: 1.20.81.10 Receptor-associated protein. Chain: null. Fragment: n-terminal domain, VNG16261 cluster01 -> 1ad600 8.7955573 185 / 126 conP: 0.326 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG16261 cluster02 -> 1brwA3 7.6100898 67 / 126 conP: 0.398 CATH-ID: 1.20.970.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 VNG16261 cluster03 -> 1qqeA0 6.6819275 281 / 126 conP: 0.134 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG16261 cluster04 -> 2lisA0 8.2213846 131 / 126 conP: 0.356 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG16261 cluster08 -> 1k40A 12.233559 126 / 126 conP: 0.644 NO-CATH --end-- VNG1630h one-of-top-five-correct: 0.334488443620174 CThresh: 5.051901 75 best_is: cluster11 VNG1630h cluster00 -> 1b8bA0 5.5096109 533 / 76 conP: 0.004 CATH-ID: 3.20.70.20 Anaerobic ribonucleotide-triphosphate reductase large chain. Chain: a. VNG1630h cluster01 -> 1apyB0 7.1532947 141 / 76 conP: 0.204 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG1630h cluster02 -> 1e7aA1 6.1259924 103 / 76 conP: 0.212 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1630h cluster03 -> 1alo02 5.6363710 119 / 76 conP: 0.168 CATH-ID: 1.10.150.120 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG1630h cluster04 -> 1apyB0 6.1349028 141 / 76 conP: 0.160 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG1630h cluster11 -> 1vin01 7.9751366 139 / 76 conP: 0.248 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG16370 one-of-top-five-correct: 0.225327956359993 CThresh: 5.802190 75 best_is: cluster02 VNG16370 cluster00 -> 1nawA2 6.0930756 208 / 71 conP: 0.067 CATH-ID: 3.65.10.10 Udp-n-acetylglucosamine 1-carboxyvinyl-transferase. Chain: a, b. Engin VNG16370 cluster01 -> 1l3rE 5.6736134 338 / 71 conP: 0.017 CATH-TRUNC VNG16370 cluster02 -> 1bplA 6.9320001 179 / 71 conP: 0.109 CATH-TRUNC VNG16370 cluster03 -> 1cf9A2 6.3028067 121 / 71 conP: 0.153 CATH-ID: 1.10.422.10 Catalase hpii. Chain: a, b, c, d. Engineered: yes. Mutation: yes VNG16370 cluster04 -> 1e7aA5 6.0930756 112 / 71 conP: 0.157 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG1640h one-of-top-five-correct: 0.354099556998175 CThresh: 8.354635 25 best_is: cluster08 VNG1640h cluster00 -> 1dpuA0 7.8589341 69 / 125 conP: 0.340 CATH-ID: 1.10.10.10 Replication protein a (rpa32) c-terminal domain. Chain: a. Fragment: c VNG1640h cluster01 -> 1gln04 6.2100330 48 / 125 conP: 0.265 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG1640h cluster02 -> 1elkA0 5.9447575 153 / 125 conP: 0.157 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG1640h cluster03 -> 1yrnA0 6.4651275 49 / 125 conP: 0.279 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG1640h cluster04 -> 1ba500 6.6450636 53 / 125 conP: 0.285 CATH-ID: 1.10.10.60 Htrf1. Chain: null. Fragment: DNA-binding domain. Synonym: telomeric r VNG1640h cluster08 -> 1lla01 8.5950683 357 / 125 conP: 0.113 CATH-ID: 1.10.639.10 Hemocyanin (subunit type ii) --end-- VNG1642h one-of-top-five-correct: 0.173737147749885 CThresh: 3.009509 96 best_is: cluster00 VNG1642h cluster00 -> 1afi00 5.5058408 72 / 39 conP: 0.165 CATH-ID: 3.30.70.100 Merp. Chain: null. Synonym: mercuric transport protein. Engineered: me VNG1642h cluster01 -> 1kvdB0 4.0012498 77 / 39 conP: 0.105 CATH-ID: 3.30.44.10 Smk toxin. Chain: a, b, c, d. Fragment: chain a and c are residues 19 VNG1642h cluster02 -> 1ea1A0 4.5027801 447 / 39 conP: 0.000 CATH-ID: 1.10.630.10 Cytochrome p450 51-like rv0764c. Chain: a. Synonym: cyp51, 14alpha-ste VNG1642h cluster03 -> 1bncA2 5.5058408 288 / 39 conP: 0.004 CATH-ID: 3.30.470.20 Biotin carboxylase. Chain: a, b. Ec: 6.3.4.14 VNG1642h cluster04 -> 1bal00 4.2520149 51 / 39 conP: 0.167 CATH-ID: 4.10.320.10 Dihydrolipoamide succinyltransferase (e3-binding domain) core from the --end-- VNG1645h one-of-top-five-correct: 0.415257671844252 CThresh: 3.850974 75 best_is: cluster15 VNG1645h cluster00 -> 1dkxA2 6.9760770 80 / 60 conP: 0.292 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG1645h cluster01 -> 1qsaA2 6.0935382 70 / 60 conP: 0.264 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG1645h cluster02 -> 1ejkA0 6.7856882 81 / 60 conP: 0.278 CATH-ID: 3.30.910.10 Dini protein. Chain: a. Engineered: yes VNG1645h cluster03 -> 1hxiA0 7.1967117 108 / 60 conP: 0.240 CATH-ID: 1.25.40.10 Peroxisome targeting signal 1 receptor pex5. Chain: a. Fragment: first VNG1645h cluster04 -> 1dkxA2 7.1967117 80 / 60 conP: 0.305 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG1645h cluster15 -> 2a3dA0 8.7411548 73 / 60 conP: 0.426 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG1651h one-of-top-five-correct: 0.365103959334922 CThresh: 2.367437 100 best_is: cluster00 VNG1651h cluster00 -> 1vin01 7.3540880 139 / 66 conP: 0.280 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG1651h cluster01 -> 1psrA0 6.4964821 100 / 66 conP: 0.315 CATH-ID: 1.10.238.10 Psoriasin. Chain: a, b. Synonym: s100a7. Engineered: yes. Other_detail VNG1651h cluster02 -> 1efuB2 6.2820806 86 / 66 conP: 0.334 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran VNG1651h cluster03 -> 1bu2A2 6.9252851 102 / 66 conP: 0.337 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG1651h cluster04 -> 1fnnA1 6.7108836 101 / 66 conP: 0.326 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer --end-- VNG16540 one-of-top-five-correct: 0.455462326379889 CThresh: 4.771774 75 best_is: cluster06 VNG16540 cluster00 -> 1t7pA1 7.7369601 226 / 97 conP: 0.210 CATH-ID: 3.30.420.10 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi VNG16540 cluster01 -> 1e4fT4 8.3090825 89 / 97 conP: 0.458 CATH-ID: 3.30.420.70 Cell division protein ftsa. Chain: t. Engineered: yes VNG16540 cluster02 -> 1itg00 8.3826619 142 / 97 conP: 0.371 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant VNG16540 cluster03 -> 1e4fT4 7.3512546 89 / 97 conP: 0.391 CATH-ID: 3.30.420.70 Cell division protein ftsa. Chain: t. Engineered: yes VNG16540 cluster04 -> 1itg00 7.2379312 142 / 97 conP: 0.297 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant VNG16540 cluster06 -> 1oneA2 8.7642388 310 / 97 conP: 0.164 CATH-ID: 3.20.20.120 Enolase. Chain: a, b. Synonym: 2-phospho-d-glycerate hydrolase. Ec: 4. --end-- VNG1655h one-of-top-five-correct: 0.369018624994163 CThresh: 7.997366 25 best_is: cluster07 VNG1655h cluster00 -> 1e7aA3 7.7842378 92 / 117 conP: 0.306 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1655h cluster01 -> 1bg602 5.3891351 146 / 117 conP: 0.138 CATH-ID: 1.10.1040.10 N-(1-d-carboxylethyl)-l-norvaline dehydrogenase. Chain: null. Engineer VNG1655h cluster02 -> 1vib00 7.2775994 54 / 117 conP: 0.323 CATH-ID: 1.20.15.90 Neurotoxin b-iv. Chain: null VNG1655h cluster03 -> 1rpo00 7.1491133 61 / 117 conP: 0.306 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid VNG1655h cluster04 -> 1ryp10 6.9343754 222 / 117 conP: 0.137 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG1655h cluster07 -> 1ihgA 8.7921569 364 / 117 conP: 0.104 NO-CATH --end-- VNG1664h one-of-top-five-correct: 0.433701754497768 CThresh: 4.217968 75 best_is: cluster07 VNG1664h cluster00 -> 1hssA0 7.7579224 111 / 62 conP: 0.259 CATH-ID: 1.10.120.10 0.19 alpha-amylase inhibitor. Chain: a, b, c, d. Biological_unit: dime VNG1664h cluster01 -> 4crxA2 7.6949192 111 / 62 conP: 0.255 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG1664h cluster02 -> 1ddbA0 7.3209771 195 / 62 conP: 0.107 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG1664h cluster03 -> 1hssA0 7.1025045 111 / 62 conP: 0.224 CATH-ID: 1.10.120.10 0.19 alpha-amylase inhibitor. Chain: a, b, c, d. Biological_unit: dime VNG1664h cluster04 -> 1e6bA 6.1590084 194 / 62 conP: 0.079 NO-CATH VNG1664h cluster07 -> 1fchA0 9.0687582 302 / 62 conP: 0.056 CATH-ID: 1.25.40.140 Peroxisomal targeting signal 1 receptor. Chain: a, b. Fragment: c-term --end-- VNG16672 one-of-top-five-correct: 0.51842779044843 CThresh: 4.249671 75 best_is: cluster05 VNG16672 cluster00 -> 1ebmA3 8.0748605 126 / 92 conP: 0.385 CATH-ID: 1.10.340.10 8-oxoguanine DNA glycosylase. Chain: a. Fragment: core fragment (resid VNG16672 cluster01 -> 1ebmA3 8.1688631 126 / 92 conP: 0.391 CATH-ID: 1.10.340.10 8-oxoguanine DNA glycosylase. Chain: a. Fragment: core fragment (resid VNG16672 cluster02 -> 1hy1A3 8.0576389 72 / 92 conP: 0.484 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a VNG16672 cluster03 -> 2cyp02 6.3042675 121 / 92 conP: 0.281 CATH-ID: 1.10.420.10 Cytochrome c peroxidase (ferrocytochrome c (colon) h2 O2 reductase) VNG16672 cluster04 -> 1trlA0 6.7845373 62 / 92 conP: 0.412 CATH-ID: 1.10.390.10 Thermolysin fragment 255 - 316 (nmr, 8 structures) VNG16672 cluster05 -> 1ebmA3 9.3321865 126 / 92 conP: 0.474 CATH-ID: 1.10.340.10 8-oxoguanine DNA glycosylase. Chain: a. Fragment: core fragment (resid --end-- VNG1672h one-of-top-five-correct: 0.231813337823689 CThresh: 8.955397 25 best_is: cluster08 VNG1672h cluster00 -> 1pda03 5.4994746 87 / 126 conP: 0.173 CATH-ID: 3.30.160.40 Porphobilinogen deaminase VNG1672h cluster01 -> 1ptvA0 6.6819275 297 / 126 conP: 0.084 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase 1b. Chain: a. Engineered: yes. Mutation: VNG1672h cluster02 -> 1e8mA2 5.6251126 353 / 126 conP: 0.047 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG1672h cluster03 -> 1es8A0 5.9773843 192 / 126 conP: 0.118 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes VNG1672h cluster04 -> 1ft1B0 4.8708711 416 / 126 conP: 0.027 CATH-ID: 1.50.10.40 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG1672h cluster08 -> 3tgl00 7.2103350 265 / 126 conP: 0.113 CATH-ID: 3.40.50.950 Triacylglycerol acylhydrolase --end-- VNG1674h one-of-top-five-correct: 0.316479417960154 CThresh: 4.062503 75 best_is: cluster06 VNG1674h cluster00 -> 1qmfA4 4.8545778 58 / 52 conP: 0.190 CATH-ID: 3.30.30.20 Penicillin-binding protein 2x. Chain: a. Engineered: yes. Other_detail VNG1674h cluster01 -> 1dn1A3 6.2363054 120 / 52 conP: 0.132 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG1674h cluster02 -> 1a81A1 4.6242899 108 / 52 conP: 0.101 CATH-ID: 3.30.505.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG1674h cluster03 -> 1gyfA0 3.9961806 62 / 52 conP: 0.148 CATH-ID: 2.30.35.50 Cytoplasmic domain binding protein (cd2bp2). Chain: a. Fragment: cd2-b VNG1674h cluster04 -> 1fuyA0 7.1574571 262 / 52 conP: 0.028 CATH-ID: 3.20.20.90 Tryptophan synthase alpha chain. Chain: a. Engineered: yes. Tryptophan VNG1674h cluster06 -> 1dn1A3 7.8483209 120 / 52 conP: 0.195 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. --end-- VNG16750 one-of-top-five-correct: 0.327027312870679 CThresh: 5.114790 75 best_is: cluster10 VNG16750 cluster00 -> 3cla00 6.4871374 213 / 87 conP: 0.129 CATH-ID: 3.30.559.10 Type III chloramphenicol acetyltransferase ( CAT=III= ) complex with c VNG16750 cluster01 -> 1ay200 6.0958809 158 / 87 conP: 0.171 CATH-ID: 3.30.700.10 Type 4 pilin. Chain: null. Synonym: fimbriae. Biological_unit: fiber-f VNG16750 cluster02 -> 1gtxA1 5.5954972 167 / 87 conP: 0.142 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG16750 cluster03 -> 1qqeA0 5.7852042 281 / 87 conP: 0.065 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG16750 cluster04 -> 1mnmA 5.4238722 85 / 87 conP: 0.234 NO-CATH VNG16750 cluster10 -> 1jeyA 7.6609070 493 / 87 conP: 0.021 NO-CATH --end-- VNG16760 one-of-top-five-correct: 0.35983347561553 CThresh: 5.286109 75 best_is: cluster12 VNG16760 cluster00 -> 1euhA1 5.7768953 274 / 110 conP: 0.116 CATH-ID: 3.40.605.10 NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrog VNG16760 cluster01 -> 1i6kA 5.7768953 316 / 110 conP: 0.092 CATH-TRUNC VNG16760 cluster02 -> 1httA1 6.3277160 267 / 110 conP: 0.139 CATH-ID: 3.40.690.10 Histidyl-tRNA synthetase. Chain: a, b, c, d. Synonym: histidine-tRNA l VNG16760 cluster03 -> 1opr00 6.2614242 213 / 110 conP: 0.182 CATH-ID: 3.40.50.90 Orotate phosphoribosyltransferase. Chain: null. Synonym: oprtase. Engi VNG16760 cluster04 -> 1kwmA 6.8087621 306 / 110 conP: 0.126 CATH-TRUNC VNG16760 cluster12 -> 1e7aA2 7.6134008 90 / 110 conP: 0.419 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG1678h one-of-top-five-correct: 0.715186332502203 CThresh: 7.185631 25 best_is: cluster01 VNG1678h cluster00 -> 1a36A5 11.069660 72 / 121 conP: 0.616 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG1678h cluster01 -> 1cii01 12.321948 344 / 121 conP: 0.323 CATH-ID: 1.20.250.10 Colicin ia. Chain: null. Engineered: yes. Biological_unit: monomer VNG1678h cluster02 -> 1a36A5 10.443119 72 / 121 conP: 0.572 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG1678h cluster03 -> 1cxzB0 8.2484640 86 / 121 conP: 0.396 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid VNG1678h cluster04 -> 1ixmA1 9.0193370 59 / 121 conP: 0.489 CATH-ID: 1.20.15.100 Sporulation response regulatory protein. Chain: a, b. Synonym: spo0b. --end-- VNG16971 one-of-top-five-correct: 0.233523286708893 CThresh: 6.797026 75 best_is: cluster04 VNG16971 cluster00 -> 2sas00 5.3375489 185 / 89 conP: 0.087 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein (iso type ii) VNG16971 cluster01 -> 1c82A 5.4936097 719 / 89 conP: 0.001 CATH-TRUNC VNG16971 cluster02 -> 1tf4A1 5.9251045 454 / 89 conP: 0.013 CATH-ID: 1.50.10.30 T. Fusca endo/exo-cellulase e4 catalytic domain and cellulose-binding VNG16971 cluster03 -> 1bgxT6 5.0131351 144 / 89 conP: 0.107 CATH-ID: 1.10.473.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG16971 cluster04 -> 1cem00 7.1002157 363 / 89 conP: 0.038 CATH-ID: 1.50.10.10 Cellulase cela (1,4-beta-d-glucan-glucanohydrolase). Chain: null. Frag --end-- VNG1699c one-of-top-five-correct: 0.199743258966129 CThresh: 8.719004 25 best_is: cluster17 VNG1699c cluster00 -> 1ei5A2 5.6465959 82 / 122 conP: 0.184 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG1699c cluster01 -> 1cauA0 4.1847171 181 / 122 conP: 0.078 CATH-ID: 2.60.120.10 Canavalin (jack bean 7s vicilin) VNG1699c cluster02 -> 1joeA 5.2495932 148 / 122 conP: 0.121 NO-CATH VNG1699c cluster03 -> 1dmlA0 4.6361929 267 / 122 conP: 0.055 CATH-ID: 3.70.10.30 DNA polymerase processivity factor. Chain: a, c, e, g. Fragment: n-ter VNG1699c cluster04 -> 1k56A0 3.3910023 242 / 122 conP: 0.045 CATH-ID: 3.40.710.10 Oxa10 beta-lactamase. Chain: a, b, c. Synonym: beta-lactamase pse-2. E VNG1699c cluster17 -> 1qu0A0 6.6746221 181 / 122 conP: 0.147 CATH-ID: 2.60.120.60 Laminin alpha2 chain. Chain: a, b, c, d. Fragment: lg5 module. Enginee --end-- VNG17030 one-of-top-five-correct: 0.257444695834218 CThresh: 4.605696 75 best_is: cluster07 VNG17030 cluster00 -> 1cjsA1 6.4666721 121 / 75 conP: 0.214 CATH-ID: 3.30.190.20 50s ribosomal protein l1p. Chain: a. Engineered: yes VNG17030 cluster01 -> 1jnrA 4.9224159 642 / 75 conP: 0.001 CATH-TRUNC VNG17030 cluster02 -> 1dh0A1 4.9224159 270 / 75 conP: 0.042 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes VNG17030 cluster03 -> 1eejA2 4.0167388 44 / 75 conP: 0.216 CATH-ID: 1.20.15.260 Thiol:disulfide interchange protein. Chain: a, b. Synonym: protein dis VNG17030 cluster04 -> 2yhx_ 5.9538435 457 / 75 conP: 0.010 CATH-TRUNC VNG17030 cluster07 -> 1elkA0 6.7789856 153 / 75 conP: 0.181 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu --end-- VNG17031 one-of-top-five-correct: 0.0370824468242432 CThresh: 2.923029 100 best_is: --end-- VNG17032 one-of-top-five-correct: 0.303822571012818 CThresh: 3.490385 75 best_is: cluster01 VNG17032 cluster00 -> 1aqcA0 6.2675658 121 / 65 conP: 0.206 CATH-ID: 2.30.29.30 X11. Chain: a, b. Fragment: ptb domain. Peptide. Chain: c, d VNG17032 cluster01 -> 1jic00 7.1308843 62 / 65 conP: 0.387 CATH-ID: 2.40.50.40 Sso7d. Chain: null. Engineered: yes. Biological_unit: monomer VNG17032 cluster02 -> 1rgeA0 5.9731691 96 / 65 conP: 0.238 CATH-ID: 3.10.30.50 Ribonuclease. Chain: a, b. Ec: 3.1.27.3 VNG17032 cluster03 -> 1pbe01 6.9682711 231 / 65 conP: 0.089 CATH-ID: 3.50.50.60 P-hydroxybenzoate hydroxylase (phbh) complexed with p-hydroxybenzoic a VNG17032 cluster04 -> 1f8rA2 5.8794137 148 / 65 conP: 0.148 CATH-ID: 3.50.50.60 L-amino acid oxidase. Chain: a, b, c, d. Ec: 1.4.3.2 --end-- VNG17190 one-of-top-five-correct: 0.265709575745994 CThresh: 5.163619 75 best_is: cluster16 VNG17190 cluster00 -> 1ivyA0 5.3202155 452 / 66 conP: 0.004 CATH-ID: 3.40.50.950 Human protective protein. Chain: a, b. Synonym: protective protein/cat VNG17190 cluster01 -> 1c82A 4.4717116 719 / 66 conP: 0.000 CATH-TRUNC VNG17190 cluster02 -> 1ak000 5.8448846 264 / 66 conP: 0.034 CATH-ID: 1.10.575.10 P1 nuclease. Chain: null. Ec: 3.1.30.1 VNG17190 cluster03 -> 1dioB0 4.7812703 179 / 66 conP: 0.061 CATH-ID: 3.40.990.10 Diol dehydratase. Chain: a, l. Engineered: yes. Diol dehydratase. Chai VNG17190 cluster04 -> 1af800 5.6388762 86 / 66 conP: 0.181 CATH-ID: 1.10.1200.10 Actinorhodin polyketide synthase acyl carrier protein. Chain: null. Sy VNG17190 cluster16 -> 1acf00 7.3540880 125 / 66 conP: 0.194 CATH-ID: 3.30.450.30 Profilin i --end-- VNG1723h one-of-top-five-correct: 0.201463997663325 CThresh: 9.477580 25 best_is: cluster09 VNG1723h cluster00 -> 1dtwB2 6.3861083 197 / 135 conP: 0.129 CATH-ID: 3.40.50.970 Branched-chain alpha-keto acid dehydrogenase alpha subunit. Chain: a. VNG1723h cluster01 -> 1vdeA2 4.7586569 94 / 135 conP: 0.137 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes VNG1723h cluster02 -> 1d6mA4 4.6870156 127 / 135 conP: 0.116 CATH-ID: 1.10.290.10 DNA topoisomerase iii. Chain: a. Engineered: yes VNG1723h cluster03 -> 1c3qA0 6.0563636 272 / 135 conP: 0.084 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG1723h cluster04 -> 1atg01 4.3350499 122 / 135 conP: 0.108 CATH-ID: 3.40.190.10 Periplasmic molybdate-binding protein. Chain: null. Synonym: moda VNG1723h cluster09 -> 1vdeA2 6.7520042 94 / 135 conP: 0.220 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes --end-- VNG17260 one-of-top-five-correct: 0.194501183649138 CThresh: 6.362553 75 best_is: cluster13 VNG17260 cluster00 -> 1a3wA1 5.8177457 155 / 87 conP: 0.128 CATH-ID: 3.40.50.50 Pyruvate kinase. Chain: a, b. Biological_unit: tetramer VNG17260 cluster01 -> 1fokA1 4.2075301 281 / 87 conP: 0.032 CATH-ID: 3.90.241.10 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG17260 cluster02 -> 1do0A3 6.1796227 109 / 87 conP: 0.191 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes VNG17260 cluster03 -> 1ft1A0 4.6019486 315 / 87 conP: 0.028 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG17260 cluster04 -> 1vpu00 5.6565275 45 / 87 conP: 0.253 CATH-ID: 1.10.195.10 Vpu protein. Chain: null. Fragment: cytoplasmic domain residues 39 - 8 VNG17260 cluster13 -> 1gtxA1 6.3122327 167 / 87 conP: 0.133 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. --end-- VNG17321 one-of-top-five-correct: 0.300610132013008 CThresh: 4.277525 75 best_is: cluster03 VNG17321 cluster00 -> 1cjsA2 6.4991039 91 / 63 conP: 0.235 CATH-ID: 3.40.50.790 50s ribosomal protein l1p. Chain: a. Engineered: yes VNG17321 cluster01 -> 1cjsA2 4.7790654 91 / 63 conP: 0.158 CATH-ID: 3.40.50.790 50s ribosomal protein l1p. Chain: a. Engineered: yes VNG17321 cluster02 -> 1thfD0 5.9697284 253 / 63 conP: 0.042 CATH-ID: 3.20.20.90 Hisf protein. Chain: d. Fragment: cyclase subunit. Synonym: imidazoleg VNG17321 cluster03 -> 1cbf02 7.4916987 121 / 63 conP: 0.227 CATH-ID: 3.30.950.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m VNG17321 cluster04 -> 1gca01 6.6713910 148 / 63 conP: 0.146 CATH-ID: 3.40.50.3300 Glucose/galactose-binding protein complex with galactose --end-- VNG17322 one-of-top-five-correct: 0.311427347484401 CThresh: 3.629318 75 best_is: cluster17 VNG17322 cluster00 -> 1ej5A0 4.5146035 107 / 61 conP: 0.138 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG17322 cluster01 -> 1fjgO0 3.7605973 88 / 61 conP: 0.138 CATH-TRUNC VNG17322 cluster02 -> 1ej5A0 4.7341459 107 / 61 conP: 0.145 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG17322 cluster03 -> 119l00 6.1477926 162 / 61 conP: 0.120 CATH-ID: 1.10.530.40 Lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, a VNG17322 cluster04 -> 1a79A 4.2950610 171 / 61 conP: 0.067 NO-CATH VNG17322 cluster17 -> 1aoa01 7.3827206 118 / 61 conP: 0.243 CATH-ID: 1.10.418.10 T-fimbrin. Chain: null. Fragment: abd1 --end-- VNG1734h one-of-top-five-correct: 0.534862775873543 CThresh: 7.037372 25 best_is: cluster09 VNG1734h cluster00 -> 1a6q01 7.3889814 294 / 110 conP: 0.110 CATH-ID: 3.60.40.10 Phosphatase 2c. Chain: null. Engineered: yes VNG1734h cluster01 -> 2cb5A 7.2457504 453 / 110 conP: 0.042 NO-CATH VNG1734h cluster02 -> 1ad600 6.8785366 185 / 110 conP: 0.177 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG1734h cluster03 -> 1uby00 6.6685253 348 / 110 conP: 0.067 CATH-ID: 1.10.600.10 Farnesyl diphosphate synthase. Chain: null. Synonym: fps. Engineered: VNG1734h cluster04 -> 1fjgO0 7.8222863 88 / 110 conP: 0.343 CATH-TRUNC VNG1734h cluster09 -> 1qdbA 10.367067 473 / 110 conP: 0.086 NO-CATH --end-- VNG17350 one-of-top-five-correct: 0.238268531583757 CThresh: 6.982509 53 best_is: cluster04 VNG17350 cluster00 -> 1mugA0 4.1975201 165 / 106 conP: 0.096 CATH-ID: 3.40.470.10 G:t/u specific DNA glycosylase. Chain: a. Engineered: yes VNG17350 cluster01 -> 1btn00 6.2140749 106 / 106 conP: 0.219 CATH-ID: 2.30.29.30 Beta-spectrin. Chain: null. Fragment: ph domain, residues 2199 - 2304. VNG17350 cluster02 -> 1f5mA0 5.4339062 176 / 106 conP: 0.124 CATH-ID: 3.30.450.40 Gaf. Chain: a, b. Engineered: yes VNG17350 cluster03 -> 1np1A0 6.6115615 184 / 106 conP: 0.159 CATH-ID: 2.40.128.20 Nitrophorin 1. Chain: a, b. Synonym: np1. Engineered: yes. Biological_ VNG17350 cluster04 -> 1plq00 6.8693085 258 / 106 conP: 0.111 CATH-ID: 3.70.10.10 Proliferating cell nuclear antigen (pcna) (synchrotron x-ray diffracti --end-- VNG17430 one-of-top-five-correct: 0.171553116799295 CThresh: 7.624631 25 best_is: cluster03 VNG17430 cluster00 -> 1d6mA2 4.6635696 175 / 97 conP: 0.077 CATH-ID: 1.10.460.10 DNA topoisomerase iii. Chain: a. Engineered: yes VNG17430 cluster01 -> 1aab00 4.8641604 83 / 97 conP: 0.146 CATH-ID: 1.10.30.10 High mobility group protein. Chain: null. Fragment: fragment a (residu VNG17430 cluster02 -> 1jvpP 5.4248814 281 / 97 conP: 0.046 NO-CATH VNG17430 cluster03 -> 1qf6A3 6.2363054 52 / 97 conP: 0.242 CATH-ID: 3.30.54.20 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG17430 cluster04 -> 1e01A0 4.3232966 48 / 97 conP: 0.159 CATH-ID: 3.10.350.10 Membrane-bound lytic murein transglycosylase d. Synonym: mltd, murein --end-- VNG17491 one-of-top-five-correct: 0.385173604755606 CThresh: 2.523155 100 best_is: cluster08 VNG17491 cluster00 -> 1aisB2 7.5698775 94 / 57 conP: 0.341 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG17491 cluster01 -> 1aisB1 7.1217693 99 / 57 conP: 0.300 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG17491 cluster02 -> 1ris00 7.1217693 97 / 57 conP: 0.305 CATH-ID: 3.30.70.60 Ribosomal protein s6 VNG17491 cluster03 -> 1fbxA2 6.6736612 136 / 57 conP: 0.193 CATH-ID: 3.50.11.20 Gtp cyclohydrolase i. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG17491 cluster04 -> 1aisB1 6.6736612 99 / 57 conP: 0.273 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG17491 cluster08 -> 1g4aA0 7.8640679 173 / 57 conP: 0.176 CATH-ID: 3.60.20.10 Atp-dependent hsl protease atp-binding subunit hslu. Chain: e, f. Syno --end-- VNG17492 one-of-top-five-correct: 0.319858723051507 CThresh: 3.997099 75 best_is: cluster10 VNG17492 cluster00 -> 1ido00 5.6494692 184 / 65 conP: 0.090 CATH-ID: 3.40.50.410 Integrin. Chain: null. Fragment: i-domain. Synonym: a-domain VNG17492 cluster01 -> 1adjA2 6.7528817 96 / 65 conP: 0.259 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Biological_unit: active a VNG17492 cluster02 -> 1ako00 6.1067133 268 / 65 conP: 0.044 CATH-ID: 3.60.10.10 Exonuclease iii. Chain: null. Engineered: yes. Biological_unit: monome VNG17492 cluster03 -> 1bhe00 5.6759344 376 / 65 conP: 0.012 CATH-ID: 2.160.20.10 Polygalacturonase. Chain: null. Synonym: peha. Engineered: yes. Biolog VNG17492 cluster04 -> 1lba00 6.7528817 146 / 65 conP: 0.169 CATH-ID: 3.40.80.10 Lysozyme mutant with ala 6 replaced by lys and residues 2 - 5 deleted VNG17492 cluster10 -> 2pldA0 7.5652885 105 / 65 conP: 0.286 CATH-ID: 3.30.505.10 PhospholipasE C-gamma-1 (c-terminal sh2 domain comprising residues 663 --end-- VNG1758h one-of-top-five-correct: 0.379728356986569 CThresh: 6.315309 75 best_is: cluster13 VNG1758h cluster00 -> 1a81A2 6.1373296 45 / 94 conP: 0.298 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG1758h cluster01 -> 1lddA 5.9928495 74 / 94 conP: 0.247 NO-CATH VNG1758h cluster02 -> 1mxa01 5.8280671 142 / 94 conP: 0.159 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met VNG1758h cluster03 -> 2lisA0 6.9446266 131 / 94 conP: 0.220 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG1758h cluster04 -> 1cb5A 6.8617976 453 / 94 conP: 0.024 NO-CATH VNG1758h cluster13 -> 1jgjA0 8.6782285 217 / 94 conP: 0.197 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes --end-- VNG17701 one-of-top-five-correct: 0.376242174924826 CThresh: 6.253798 75 best_is: cluster05 VNG17701 cluster00 -> 1fjgB2 7.7579224 62 / 102 conP: 0.399 CATH-TRUNC VNG17701 cluster01 -> 1aisB1 6.2734546 99 / 102 conP: 0.251 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG17701 cluster02 -> 1ha7A 6.7168712 162 / 102 conP: 0.198 NO-CATH VNG17701 cluster03 -> 1e7aA3 7.4076583 92 / 102 conP: 0.328 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG17701 cluster04 -> 1derA1 8.1352722 250 / 102 conP: 0.169 CATH-ID: 1.10.560.10 Groel. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n. Engineered: ye VNG17701 cluster05 -> 1vin01 8.4275774 139 / 102 conP: 0.321 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG1777h one-of-top-five-correct: 0.302906515390356 CThresh: 9.016877 25 best_is: cluster10 VNG1777h cluster00 -> 1cr4A0 7.6571987 243 / 137 conP: 0.162 CATH-ID: 3.40.50.300 DNA primase/helicase. Chain: a. Fragment: helicase domain. Engineered: VNG1777h cluster01 -> 1uxy02 4.9956718 66 / 137 conP: 0.182 CATH-ID: 3.30.43.10 Uridine diphospho-n-acetylenolpyruvylglucosamine reductase. Chain: nul VNG1777h cluster02 -> 1fjhA0 7.3138499 236 / 137 conP: 0.154 CATH-ID: 3.40.50.720 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase. Chain: a, b. S VNG1777h cluster03 -> 1egzA0 5.6411747 291 / 137 conP: 0.078 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: VNG1777h cluster04 -> 1tpm00 5.4064474 50 / 137 conP: 0.213 CATH-ID: 2.10.70.10 Tissue-type plasminogen activator (type 1 fibrin-binding finger domain VNG1777h cluster10 -> 1qo2A0 7.9858711 238 / 137 conP: 0.179 CATH-ID: 3.20.20.90 N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonuc --end-- VNG17810 one-of-top-five-correct: 0.261862606233543 CThresh: 8.897391 25 best_is: cluster14 VNG17810 cluster00 -> 1tfe02 5.1757254 45 / 110 conP: 0.174 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG17810 cluster01 -> 1qqnA4 5.3112533 84 / 110 conP: 0.146 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG17810 cluster02 -> 1qgxA1 5.9266303 219 / 110 conP: 0.079 CATH-ID: 3.30.540.10 3',5'-adenosine bisphosphatase. Chain: a. Synonym: pap phosphatase. En VNG17810 cluster03 -> 1ifa_ 6.0612276 158 / 110 conP: 0.117 NO-CATH VNG17810 cluster04 -> 1jciA 4.8673850 294 / 110 conP: 0.038 NO-CATH VNG17810 cluster14 -> 1abv00 7.9912659 105 / 110 conP: 0.244 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi --end-- VNG17820 one-of-top-five-correct: 0.619911253517184 CThresh: 4.741995 75 best_is: cluster00 VNG17820 cluster00 -> 1ivhA3 11.057044 141 / 76 conP: 0.458 CATH-ID: 1.20.140.10 Isovaleryl-coa dehydrogenase. Chain: a, b, c, d. Engineered: yes. Biol VNG17820 cluster01 -> 1bmtA1 7.8338263 87 / 76 conP: 0.354 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG17820 cluster02 -> 1gai00 9.4319757 472 / 76 conP: 0.024 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc VNG17820 cluster03 -> 1qlaA3 9.4133600 118 / 76 conP: 0.394 CATH-ID: 1.20.1040.60 Fumarate reductase flavoprotein subunit. Chain: a, d. Other_details: 8 VNG17820 cluster04 -> 1glqA2 8.7969785 108 / 76 conP: 0.374 CATH-ID: 1.20.1050.10 Glutathione s-transferase yfyf (class pi) complexed with s-(p-nitroben --end-- VNG1783h one-of-top-five-correct: 0.364826097175284 CThresh: 5.504366 75 best_is: cluster06 VNG1783h cluster00 -> 1aisB1 7.8589341 99 / 69 conP: 0.266 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG1783h cluster01 -> 1dceA1 8.2820295 317 / 69 conP: 0.043 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG1783h cluster02 -> 1c9bA2 7.0127434 106 / 69 conP: 0.209 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG1783h cluster03 -> 1c3qA0 7.0744339 272 / 69 conP: 0.048 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG1783h cluster04 -> 1bwoA0 7.0127434 90 / 69 conP: 0.237 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 VNG1783h cluster06 -> 1i1rB0 8.7051248 167 / 69 conP: 0.188 CATH-ID: 1.20.120.200 Interleukin-6 receptor beta chain. Chain: a. Fragment: domains 1, 2, 3 --end-- VNG17851 one-of-top-five-correct: 0.467924040628067 CThresh: 4.058027 75 best_is: cluster17 VNG17851 cluster00 -> 1cbf02 7.6536012 121 / 66 conP: 0.260 CATH-ID: 3.30.950.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m VNG17851 cluster01 -> 1egzA0 6.9252851 291 / 66 conP: 0.045 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: VNG17851 cluster02 -> 1auq00 8.2230351 208 / 66 conP: 0.141 CATH-ID: 3.40.50.410 A1 domain of von willebrand factor. Chain: null. Fragment: a1. Enginee VNG17851 cluster03 -> 1ao3A0 5.8532777 187 / 66 conP: 0.094 CATH-ID: 3.40.50.410 Von willebrand factor. Chain: a, b. Fragment: a3 domain. Engineered: s VNG17851 cluster04 -> 1u2fA0 5.9400796 90 / 66 conP: 0.229 CATH-ID: 3.30.70.330 Splicing factor u2af 65 kd subunit. Chain: a. Fragment: first RNA-bind VNG17851 cluster17 -> 2if100 9.2837013 126 / 66 conP: 0.347 CATH-ID: 3.30.780.10 Eif1. Chain: null. Synonym: sui1. Engineered: yes. Other_details: n-te --end-- VNG1786h one-of-top-five-correct: 0.406647486258861 CThresh: 5.899394 75 best_is: cluster13 VNG1786h cluster00 -> 1fokA2 6.7712505 87 / 91 conP: 0.282 CATH-ID: 1.10.10.10 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG1786h cluster01 -> 1bob03 5.6836457 54 / 91 conP: 0.270 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG1786h cluster02 -> 1fokA2 5.7046244 87 / 91 conP: 0.224 CATH-ID: 1.10.10.10 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG1786h cluster03 -> 1af701 5.0757511 80 / 91 conP: 0.203 CATH-ID: 1.10.155.10 Chemotaxis receptor methyltransferase cher. Chain: null. Engineered: y VNG1786h cluster04 -> 1octC1 5.5270399 71 / 91 conP: 0.237 CATH-ID: 1.10.260.10 Oct-1 (pou domain) VNG1786h cluster13 -> 1pbv02 8.8668774 113 / 91 conP: 0.370 CATH-ID: 1.10.1000.11 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: --end-- VNG1790h one-of-top-five-correct: 0.308752406023583 CThresh: 7.642873 25 best_is: cluster06 VNG1790h cluster00 -> 1vhrA0 5.7739845 178 / 118 conP: 0.140 CATH-ID: 3.90.190.10 Human vh1-related dual-specificity phosphatase vhr. Chain: a, b. Synon VNG1790h cluster01 -> 1uroA0 6.5041717 357 / 118 conP: 0.065 CATH-ID: 3.20.20.210 Uroporphyrinogen decarboxylase. Chain: a. Synonym: uro-d, urod. Engine VNG1790h cluster02 -> 1cc8A0 6.4750260 72 / 118 conP: 0.271 CATH-ID: 3.30.70.100 Metallochaperone atx1. Chain: a. Engineered: yes VNG1790h cluster03 -> 1reqB1 6.2629187 437 / 118 conP: 0.039 CATH-ID: 3.20.20.240 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de VNG1790h cluster04 -> 1aj300 7.3982966 98 / 118 conP: 0.294 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: null. Fragment: 16th repeat, residues 1772 - 18 VNG1790h cluster06 -> 1ccwB1 7.8707675 417 / 118 conP: 0.067 CATH-ID: 3.20.20.290 Glutamate mutase. Chain: a, c. Fragment: b12-binding subunit. Synonym: --end-- VNG1796h one-of-top-five-correct: 0.50999299666698 CThresh: 7.040271 25 best_is: cluster02 VNG1796h cluster00 -> 1cliA1 6.9411014 166 / 104 conP: 0.182 CATH-ID: 3.30.70.460 Phosphoribosyl-aminoimidazole synthetase. Chain: a, b, c, d. Engineere VNG1796h cluster01 -> 1bmtA1 6.7975716 87 / 104 conP: 0.266 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG1796h cluster02 -> 1bmtA1 10.232068 87 / 104 conP: 0.494 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG1796h cluster03 -> 1qsaA1 7.4106673 363 / 104 conP: 0.063 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG1796h cluster04 -> 1j8mF1 6.2346690 87 / 104 conP: 0.236 CATH-ID: 1.20.120.140 Signal recognition 54 kda protein. Chain: f. Fragment: g-domain, gtpas --end-- VNG1800h one-of-top-five-correct: 0.247682545468078 CThresh: 5.460269 75 best_is: cluster10 VNG1800h cluster00 -> 1cf7B0 6.0101414 82 / 62 conP: 0.181 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG1800h cluster01 -> 1aoa01 6.4470866 118 / 62 conP: 0.143 CATH-ID: 1.10.418.10 T-fimbrin. Chain: null. Fragment: abd1 VNG1800h cluster02 -> 1c9bA2 4.6993056 106 / 62 conP: 0.104 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG1800h cluster03 -> 3ygsP0 6.4470866 97 / 62 conP: 0.175 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: c. Fragment: caspase re VNG1800h cluster04 -> 1fadA0 6.4470866 95 / 62 conP: 0.178 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG1800h cluster10 -> 2dpmA2 7.3209771 103 / 62 conP: 0.203 CATH-ID: 1.10.1020.10 Adenine-specific methyltransferase dpnii 1. Chain: a. Synonym: m.Dpnii --end-- VNG1806h one-of-top-five-correct: 0.191647854710882 CThresh: 5.963187 75 best_is: cluster04 VNG1806h cluster00 -> 1tl2A0 6.1259924 235 / 76 conP: 0.061 CATH-ID: 2.115.10.10 Tachylectin-2. Chain: a. Synonym: l10. Other_details: formerly named l VNG1806h cluster01 -> 1bpoA1 4.4823085 332 / 76 conP: 0.016 CATH-ID: 2.130.30.10 Clathrin. Chain: a, b, c. Fragment: terminal domain and linker. Engine VNG1806h cluster02 -> 1acf00 4.7231848 125 / 76 conP: 0.107 CATH-ID: 3.30.450.30 Profilin i VNG1806h cluster03 -> 1dl5A 5.7150714 317 / 76 conP: 0.026 NO-CATH VNG1806h cluster04 -> 1dl5A 6.3314528 317 / 76 conP: 0.031 NO-CATH --end-- VNG1807h one-of-top-five-correct: 0.201907670002167 CThresh: 9.607114 25 best_is: cluster03 VNG1807h cluster00 -> 1c3qA0 5.9544100 272 / 138 conP: 0.083 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG1807h cluster01 -> 1oneA2 5.2370380 310 / 138 conP: 0.057 CATH-ID: 3.20.20.120 Enolase. Chain: a, b. Synonym: 2-phospho-d-glycerate hydrolase. Ec: 4. VNG1807h cluster02 -> 1e8xA3 5.2651883 185 / 138 conP: 0.104 CATH-ID: 1.25.40.110 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG1807h cluster03 -> 1hwxA1 6.7499816 51 / 138 conP: 0.260 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG1807h cluster04 -> 1il4A 4.6484680 267 / 138 conP: 0.060 NO-CATH --end-- VNG1820h one-of-top-five-correct: 0.354239899001089 CThresh: 5.882852 75 best_is: cluster18 VNG1820h cluster00 -> 1pjr02 7.2784964 72 / 76 conP: 0.293 CATH-ID: 1.10.10.160 Pcra. Chain: null. Engineered: yes VNG1820h cluster01 -> 1t7pA3 6.9478343 178 / 76 conP: 0.124 CATH-ID: 3.30.70.370 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi VNG1820h cluster02 -> 1dqaA3 6.7423738 117 / 76 conP: 0.190 CATH-ID: 3.30.70.420 Hmg-coa reductase. Chain: a, b, c, d. Fragment: catalytic portion. Eng VNG1820h cluster03 -> 2reb02 5.1147848 59 / 76 conP: 0.200 CATH-ID: 3.30.250.10 Reca protein VNG1820h cluster04 -> 1g57A 6.0298434 205 / 76 conP: 0.078 NO-CATH VNG1820h cluster18 -> 1dik05 8.5915181 89 / 76 conP: 0.341 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y --end-- VNG1826h one-of-top-five-correct: 0.207666015277018 CThresh: 6.998675 61 best_is: cluster00 VNG1826h cluster00 -> 1u2fA0 7.1211381 90 / 74 conP: 0.201 CATH-ID: 3.30.70.330 Splicing factor u2af 65 kd subunit. Chain: a. Fragment: first RNA-bind VNG1826h cluster01 -> 2hgsA5 3.9316434 68 / 74 conP: 0.110 CATH-ID: 2.30.35.80 Glutathione synthetase. Chain: a. Engineered: yes. Biological_unit: ho VNG1826h cluster02 -> 1f94A0 5.4240798 63 / 74 conP: 0.166 CATH-ID: 2.10.60.10 Bucandin. Chain: a VNG1826h cluster03 -> 1d0dA0 5.0980557 60 / 74 conP: 0.157 CATH-ID: 4.10.410.10 Anticoagulant protein. Chain: a. Synonym: tap. Pancreatic trypsin inhi VNG1826h cluster04 -> 1aisB2 6.0959098 94 / 74 conP: 0.153 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t --end-- VNG1827h one-of-top-five-correct: 0.224008058305112 CThresh: 6.993987 72 best_is: cluster07 VNG1827h cluster00 -> 2cblA3 6.5326854 86 / 105 conP: 0.257 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 VNG1827h cluster01 -> 1dh0A1 5.8924623 270 / 105 conP: 0.078 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes VNG1827h cluster02 -> 1vcc00 5.9954371 77 / 105 conP: 0.240 CATH-ID: 3.30.66.10 DNA topoisomerase i. Chain: null. Fragment: amino terminal 9kda, resid VNG1827h cluster03 -> 1bf203 5.2615466 114 / 105 conP: 0.166 CATH-ID: 2.60.40.1180 Isoamylase. Chain: null. Synonym: glycogen 6-glucanohydrolase. Ec: 3.2 VNG1827h cluster04 -> 1yua02 5.5119095 58 / 105 conP: 0.237 CATH-ID: 3.10.30.110 Topoisomerase i. Chain: null. Fragment: 122 c-terminal residues. Engin VNG1827h cluster07 -> 1b00A0 6.6775557 122 / 105 conP: 0.221 CATH-ID: 3.40.50.3000 Phosphate regulon transcriptional regulatory protein phob. Chain: a, b --end-- VNG1832h one-of-top-five-correct: 0.18898297210052 CThresh: 4.613138 75 best_is: cluster12 VNG1832h cluster00 -> 1sknP0 6.3777306 74 / 45 conP: 0.175 CATH-ID: 1.10.880.10 Transcription factor skn-1. Chain: p. Fragment: binding domain. Engine VNG1832h cluster01 -> 1mudA1 5.4161265 113 / 45 conP: 0.080 CATH-ID: 1.10.15.10 Adenine glycosylase. Chain: a. Fragment: catalytic domain. Mutation: y VNG1832h cluster02 -> 1cr5A2 5.6565275 101 / 45 conP: 0.102 CATH-ID: 3.10.330.10 Sec18p (residues 22 - 210). Chain: a, b, c. Fragment: n-terminal domai VNG1832h cluster03 -> 1isvA 6.1373296 436 / 45 conP: 0.001 NO-CATH VNG1832h cluster04 -> 1a4mA0 5.8969285 349 / 45 conP: 0.003 CATH-ID: 3.20.20.140 Adenosine deaminase. Chain: a, b, c, d. Synonym: ada. Engineered: yes VNG1832h cluster12 -> 1a0oF0 6.3777306 69 / 45 conP: 0.186 CATH-ID: 3.30.70.400 Chey. Chain: a, c, e, g. Engineered: yes. Chea. Chain: b, d, f, h. Fra --end-- VNG1838h one-of-top-five-correct: 0.172573682820307 CThresh: 5.382953 75 best_is: cluster03 VNG1838h cluster00 -> 1vpu00 4.2141213 45 / 51 conP: 0.145 CATH-ID: 1.10.195.10 Vpu protein. Chain: null. Fragment: cytoplasmic domain residues 39 - 8 VNG1838h cluster01 -> 1a3aA0 5.8234810 145 / 51 conP: 0.064 CATH-ID: 3.40.930.10 Mannitol-specific eii. Chain: a, b, c, d. Fragment: iia domain, residu VNG1838h cluster02 -> 1awcB0 4.4337301 153 / 51 conP: 0.039 CATH-ID: 1.25.40.20 Ga binding protein alpha. Chain: a. Fragment: ets domain plus 30 c-ter VNG1838h cluster03 -> 1mla01 6.2867313 73 / 51 conP: 0.173 CATH-ID: 3.30.70.250 Malonyl-coenzyme a acyl carrier protein transacylase. Chain: null. Syn VNG1838h cluster04 -> 1a9xA3 5.6805598 70 / 51 conP: 0.155 CATH-ID: 2.30.35.30 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee --end-- VNG18431 one-of-top-five-correct: 0.542832545977601 CThresh: 4.792984 75 best_is: cluster03 VNG18431 cluster00 -> 1t7pA4 8.7291807 101 / 109 conP: 0.506 CATH-ID: 1.10.473.10 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi VNG18431 cluster01 -> 1qckA0 8.9092092 89 / 109 conP: 0.538 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes VNG18431 cluster02 -> 1t7pA4 9.0930142 101 / 109 conP: 0.532 CATH-ID: 1.10.473.10 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi VNG18431 cluster03 -> 1a0p01 9.4597869 91 / 109 conP: 0.574 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG18431 cluster04 -> 1qckA0 7.2055697 89 / 109 conP: 0.416 CATH-ID: 1.10.150.40 Barrier-to-autointegration factor. Chain: a, b. Engineered: yes --end-- VNG18440 one-of-top-five-correct: 0.374782624036128 CThresh: 3.616036 75 best_is: cluster10 VNG18440 cluster00 -> 1eal00 6.8600534 127 / 74 conP: 0.261 CATH-ID: 2.40.128.20 Ileal lipid binding protein. Chain: null. Synonym: gastrotropin. Engin VNG18440 cluster01 -> 1ospO1 6.8214811 73 / 74 conP: 0.368 CATH-ID: 2.30.70.11 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG18440 cluster02 -> 1qf6A5 7.2304833 102 / 74 conP: 0.332 CATH-ID: 3.40.50.800 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG18440 cluster03 -> 1a0i02 5.7806107 102 / 74 conP: 0.247 CATH-ID: 2.40.50.10 DNA ligase. Chain: null. Engineered: yes. Mutation: m2v VNG18440 cluster04 -> 1svb01 5.9877353 136 / 74 conP: 0.201 CATH-ID: 2.60.98.10 Tick-borne encephalitis virus glycoprotein. Chain: null VNG18440 cluster10 -> 1epaA0 7.8518573 160 / 74 conP: 0.256 CATH-ID: 2.40.128.20 Epididymal retinoic acid-binding protein (androgen dependent secretory --end-- VNG18470 one-of-top-five-correct: 0.283401820716306 CThresh: 6.874264 75 best_is: cluster09 VNG18470 cluster00 -> 1mml02 5.7228429 146 / 92 conP: 0.131 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes VNG18470 cluster01 -> 1hyp00 6.3688561 75 / 92 conP: 0.238 CATH-ID: 1.10.110.10 Hydrophobic protein from soybean VNG18470 cluster02 -> 1ezfA 7.5872015 323 / 92 conP: 0.063 CATH-TRUNC VNG18470 cluster03 -> 1inp01 5.7897824 47 / 92 conP: 0.246 CATH-ID: 4.10.460.10 Inositol polyphosphate 1-phosphatase (1-ptase) (inositol-1,4-bisphosph VNG18470 cluster04 -> 1pxtA1 6.6177654 186 / 92 conP: 0.126 CATH-ID: 3.40.47.10 Peroxisomal 3-ketoacyl-coa thiolase VNG18470 cluster09 -> 1mdl01 7.7810887 126 / 92 conP: 0.241 CATH-ID: 3.30.390.10 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r --end-- VNG1848h one-of-top-five-correct: 0.228237238835374 CThresh: 7.188291 25 best_is: cluster17 VNG1848h cluster00 -> 1dnpA2 4.9203648 123 / 99 conP: 0.129 CATH-ID: 1.25.40.80 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG1848h cluster01 -> 1nkl00 5.2920089 78 / 99 conP: 0.185 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG1848h cluster02 -> 2nef00 4.9464121 136 / 99 conP: 0.120 CATH-ID: 3.30.62.10 Negative factor (f-protein). Chain: null. Synonym: HIV-1 nef. Engineer VNG1848h cluster03 -> 1cb8A1 5.6618249 312 / 99 conP: 0.046 CATH-ID: 1.50.40.10 Chondroitinase ac. Chain: a. Ec: 4.2.2.5 VNG1848h cluster04 -> 1jwfA 5.2826135 139 / 99 conP: 0.129 NO-CATH VNG1848h cluster17 -> 1lfdA0 6.9684598 87 / 99 conP: 0.257 CATH-ID: 3.10.20.90 Ralgds. Chain: a, c. Fragment: ras-interacting domain, c-terminal doma --end-- VNG18610 one-of-top-five-correct: 0.616229484767062 CThresh: 5.049643 75 best_is: cluster15 VNG18610 cluster00 -> 2scuB3 7.7751397 146 / 109 conP: 0.355 CATH-ID: 3.40.50.261 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG18610 cluster01 -> 1di0A0 9.4818465 145 / 109 conP: 0.475 CATH-ID: 3.40.50.960 Lumazine synthase. Chain: a, b, c, d, e. Engineered: yes VNG18610 cluster02 -> 1di0A0 8.5612476 145 / 109 conP: 0.410 CATH-ID: 3.40.50.960 Lumazine synthase. Chain: a, b, c, d, e. Engineered: yes VNG18610 cluster03 -> 1bmtA2 7.2724092 158 / 109 conP: 0.306 CATH-ID: 3.40.50.280 Methionine synthase (b12-binding domains) VNG18610 cluster04 -> 2scuB3 10.034509 146 / 109 conP: 0.513 CATH-ID: 3.40.50.261 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG18610 cluster15 -> 1moq02 10.402445 148 / 109 conP: 0.536 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d --end-- VNG18612 one-of-top-five-correct: 0.264098284234018 CThresh: 6.955061 75 best_is: cluster19 VNG18612 cluster00 -> 1atiA2 5.9259503 113 / 104 conP: 0.195 CATH-ID: 3.40.50.800 Glycyl-tRNA synthetase. Chain: a, b. Synonym: glycine-tRNA ligase. Oth VNG18612 cluster01 -> 1guxB0 4.9176650 141 / 104 conP: 0.130 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG18612 cluster02 -> 1httA2 5.7731678 98 / 104 conP: 0.204 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Synonym: histidine-tRNA l VNG18612 cluster03 -> 1kkrA 5.3561081 401 / 104 conP: 0.029 NO-CATH VNG18612 cluster04 -> 1i60A 5.8264425 272 / 104 conP: 0.075 NO-CATH VNG18612 cluster19 -> 1eif02 7.2785985 60 / 104 conP: 0.338 CATH-ID: 2.40.50.130 Eukaryotic translation initiation factor 5a. Chain: null. Engineered: --end-- VNG1865h one-of-top-five-correct: 0.469675155175518 CThresh: 4.559058 75 best_is: cluster07 VNG1865h cluster00 -> 1e7aA3 7.3545542 92 / 65 conP: 0.276 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG1865h cluster01 -> 1chkA2 8.6913868 95 / 65 conP: 0.352 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG1865h cluster02 -> 1a1w00 6.0901480 83 / 65 conP: 0.226 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG1865h cluster03 -> 1yge05 5.0297661 349 / 65 conP: 0.012 CATH-ID: 1.20.245.10 Lipoxygenase-1. Chain: null. Synonym: l-1. Ec: 1.13.11.12 VNG1865h cluster04 -> 1vin01 7.1836606 139 / 65 conP: 0.180 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG1865h cluster07 -> 1vin02 9.5529446 113 / 65 conP: 0.365 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG18670 one-of-top-five-correct: 0.394806521644052 CThresh: 8.636951 25 best_is: cluster00 VNG18670 cluster00 -> 1edg00 9.2902859 380 / 121 conP: 0.104 CATH-ID: 3.20.20.80 Endoglucanase a. Chain: null. Fragment: catalytic domain, c terminus t VNG18670 cluster01 -> 1jrxA 5.0278899 568 / 121 conP: 0.011 CATH-TRUNC VNG18670 cluster02 -> 1uroA0 6.1393254 357 / 121 conP: 0.051 CATH-ID: 3.20.20.210 Uroporphyrinogen decarboxylase. Chain: a. Synonym: uro-d, urod. Engine VNG18670 cluster03 -> 1gsiA 5.6708641 208 / 121 conP: 0.100 CATH-TRUNC VNG18670 cluster04 -> 1vom03 5.7082128 70 / 121 conP: 0.199 CATH-ID: 1.10.162.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y --end-- VNG18671 one-of-top-five-correct: 0.482659778421557 CThresh: 2.864020 100 best_is: cluster00 VNG18671 cluster00 -> 1d1dA1 8.6762695 140 / 76 conP: 0.396 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG18671 cluster01 -> 1d1dA1 7.5642157 140 / 76 conP: 0.322 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG18671 cluster02 -> 1d1dA1 6.8441284 140 / 76 conP: 0.279 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG18671 cluster03 -> 1c3qA0 7.7696762 272 / 76 conP: 0.130 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG18671 cluster04 -> 1c3qA0 7.8619845 272 / 76 conP: 0.133 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy --end-- VNG18681 one-of-top-five-correct: 0.609958330243132 CThresh: 3.280830 75 best_is: cluster01 VNG18681 cluster00 -> 1acp00 6.1869200 77 / 77 conP: 0.346 CATH-ID: 1.10.1200.10 Acyl carrier protein (nmr, 2 structures) VNG18681 cluster01 -> 1eo0A0 10.256548 77 / 77 conP: 0.631 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En VNG18681 cluster02 -> 1knyA2 7.2008940 128 / 77 conP: 0.308 CATH-ID: 1.20.30.20 Kanamycin nucleotidyltransferase. Chain: a, b. Synonym: kntase. Engine VNG18681 cluster03 -> 1qrjB1 6.1059571 114 / 77 conP: 0.269 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG18681 cluster04 -> 1mjhA0 5.7951209 143 / 77 conP: 0.206 CATH-ID: 3.40.50.1420 Atp-binding domain of protein mj0577. Chain: a, b. Fragment: atp-bindi --end-- VNG1877c one-of-top-five-correct: 0.901860691163282 CThresh: 4.145200 75 best_is: cluster00 VNG1877c cluster00 -> 1ad4B0 14.881792 248 / 104 conP: 0.709 CATH-ID: 3.20.20.20 Dihydropteroate synthetase. Chain: a, b. Synonym: dhps. Ec: 2.5.1.15 VNG1877c cluster01 -> 1goiA 12.046380 496 / 104 conP: 0.168 NO-CATH VNG1877c cluster02 -> 1kkrA 11.414710 401 / 104 conP: 0.242 NO-CATH VNG1877c cluster03 -> 1qd1B1 10.116013 180 / 104 conP: 0.493 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG1877c cluster04 -> 1reqA1 12.827233 522 / 104 conP: 0.175 CATH-ID: 3.20.20.240 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de --end-- VNG18800 one-of-top-five-correct: 0.291459949917254 CThresh: 6.417898 75 best_is: cluster08 VNG18800 cluster00 -> 1bgxT3 6.5809469 147 / 109 conP: 0.221 CATH-ID: 3.30.420.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG18800 cluster01 -> 1rypF0 5.5529447 233 / 109 conP: 0.108 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG18800 cluster02 -> 1a9xA3 5.7082128 70 / 109 conP: 0.266 CATH-ID: 2.30.35.30 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG18800 cluster03 -> 1asu00 5.2470916 162 / 109 conP: 0.149 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG18800 cluster04 -> 1rypJ0 7.0882894 204 / 109 conP: 0.186 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG18800 cluster08 -> 1avaA2 7.2947360 58 / 109 conP: 0.382 CATH-ID: 2.60.40.1180 Barley alpha-amylase 2(cv menuet). Chain: a, b. Synonym: amy2. Enginee --end-- VNG18830 one-of-top-five-correct: 0.481636930864194 CThresh: 4.451684 75 best_is: cluster16 VNG18830 cluster00 -> 1fecA1 6.7530391 238 / 102 conP: 0.182 CATH-ID: 3.50.50.60 Trypanothione reductase. Chain: a, b. Engineered: yes. Biological_unit VNG18830 cluster01 -> 1b4vA1 7.2288600 332 / 102 conP: 0.118 CATH-ID: 3.50.50.60 Cholesterol oxidase. Chain: null. Biological_unit: monomer. Other_deta VNG18830 cluster02 -> 2yhx_ 5.5725987 457 / 102 conP: 0.034 CATH-TRUNC VNG18830 cluster03 -> 1qlaA1 6.0826111 331 / 102 conP: 0.088 CATH-ID: 3.50.50.60 Fumarate reductase flavoprotein subunit. Chain: a, d. Other_details: 8 VNG18830 cluster04 -> 3ladA1 8.4209130 228 / 102 conP: 0.278 CATH-ID: 3.50.50.60 Dihydrolipoamide dehydrogenase VNG18830 cluster16 -> 1qorA2 8.7930466 146 / 102 conP: 0.430 CATH-ID: 3.40.50.720 Quinone oxidoreductase complexed with NADPH --end-- VNG18832 one-of-top-five-correct: 0.536913845670838 CThresh: 4.999352 75 best_is: cluster04 VNG18832 cluster00 -> 1ih8A0 6.4810239 271 / 95 conP: 0.108 CATH-ID: 3.40.50.610 Nh(3)-dependent NAD(+) synthetase. Chain: a, b. Synonym: NAD(+) synthe VNG18832 cluster01 -> 1hwxA1 6.3658409 51 / 95 conP: 0.371 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG18832 cluster02 -> 1jud02 7.3978421 75 / 95 conP: 0.400 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG18832 cluster03 -> 1df4A0 7.5698775 57 / 95 conP: 0.444 CATH-ID: 1.20.15.180 HIV-1 envelope glycoprotein gp41. Chain: a. Fragment: residues 1 - 34 VNG18832 cluster04 -> 1cpy02 9.8069357 72 / 95 conP: 0.577 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a --end-- VNG1889h one-of-top-five-correct: 0.171740933420441 CThresh: 6.694924 75 best_is: cluster07 VNG1889h cluster00 -> 1itg00 5.4198820 142 / 83 conP: 0.110 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant VNG1889h cluster01 -> 1asyA1 6.1023505 137 / 83 conP: 0.136 CATH-ID: 2.40.50.10 Aspartyl tRNA synthetase (asprs) complexed with transfer ribonucleic a VNG1889h cluster02 -> 1yagA1 4.8641604 132 / 83 conP: 0.103 CATH-ID: 3.30.420.50 Actin. Chain: a. Gelsolin. Chain: g. Fragment: subdomain 1. Synonym: a VNG1889h cluster03 -> 1eif02 5.8462439 60 / 83 conP: 0.219 CATH-ID: 2.40.50.130 Eukaryotic translation initiation factor 5a. Chain: null. Engineered: VNG1889h cluster04 -> 1d2sA0 5.3021601 170 / 83 conP: 0.087 CATH-ID: 2.60.120.60 Sex hormone-binding globulin. Chain: a. Fragment: residues 1 to 205. S VNG1889h cluster07 -> 1rrpB0 6.1370753 134 / 83 conP: 0.140 CATH-ID: 2.30.29.30 Ran. Chain: a, c. Engineered: yes. Nuclear pore complex protein nup358 --end-- VNG1895h one-of-top-five-correct: 0.324479468728189 CThresh: 6.998550 25 best_is: cluster06 VNG1895h cluster00 -> 1hplA1 6.1073882 337 / 114 conP: 0.068 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) VNG1895h cluster01 -> 1ad4B0 7.4344028 248 / 114 conP: 0.156 CATH-ID: 3.20.20.20 Dihydropteroate synthetase. Chain: a, b. Synonym: dhps. Ec: 2.5.1.15 VNG1895h cluster02 -> 1dik06 5.5156315 98 / 114 conP: 0.211 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG1895h cluster03 -> 2scuB1 5.7396928 155 / 114 conP: 0.167 CATH-ID: 3.30.470.20 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG1895h cluster04 -> 1qaxA1 6.7360252 110 / 114 conP: 0.261 CATH-ID: 3.30.70.420 3-hydroxy-3-methylglutaryl-coenzyme a reductase. Chain: a, b. Engineer VNG1895h cluster06 -> 1i9yA 7.8686547 336 / 114 conP: 0.109 NO-CATH --end-- VNG1902h one-of-top-five-correct: 0.368003440057313 CThresh: 3.972613 75 best_is: cluster13 VNG1902h cluster00 -> 1a5t03 5.9188440 116 / 70 conP: 0.201 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG1902h cluster01 -> 1cy5A0 5.9189987 92 / 70 conP: 0.243 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re VNG1902h cluster02 -> 1qj2C2 4.7956370 105 / 70 conP: 0.169 CATH-ID: 3.30.390.50 Carbon monoxide dehydrogenase. Chain: a, g. Carbon monoxide dehydrogen VNG1902h cluster03 -> 1ddf00 5.2869505 127 / 70 conP: 0.158 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG1902h cluster04 -> 1gln05 6.7613687 98 / 70 conP: 0.278 CATH-ID: 1.10.10.350 Glutamyl-tRNA synthetase. Chain: null VNG1902h cluster13 -> 1dn1A3 8.0251557 120 / 70 conP: 0.308 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. --end-- VNG19031 one-of-top-five-correct: 0.333995270054527 CThresh: 4.087986 75 best_is: cluster04 VNG19031 cluster00 -> 1smlA0 6.2873081 266 / 67 conP: 0.050 CATH-ID: 3.60.15.10 Penicillinase. Chain: a. Engineered: yes. Biological_unit: tetramer VNG19031 cluster01 -> 1bob02 5.8159671 124 / 67 conP: 0.169 CATH-ID: 3.40.630.30 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG19031 cluster02 -> 1i9jH 7.0965607 220 / 67 conP: 0.098 NO-CATH VNG19031 cluster03 -> 1jcxA 5.8159671 255 / 67 conP: 0.049 NO-CATH VNG19031 cluster04 -> 1qasA2 7.7368575 291 / 67 conP: 0.058 CATH-ID: 3.20.20.190 PhospholipasE C delta-1. Chain: a, b. Synonym: plc-delta-1. Engineered --end-- VNG19051 one-of-top-five-correct: 0.648029922319835 CThresh: 6.557167 75 best_is: cluster04 VNG19051 cluster00 -> 1fz1F2 7.4548913 73 / 112 conP: 0.370 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: VNG19051 cluster01 -> 1ggqA0 8.2357502 162 / 112 conP: 0.297 CATH-ID: 1.20.120.240 Outer surface protein c. Chain: a, b, c, d. Fragment: residues 38-210. VNG19051 cluster02 -> 1fjgO0 8.1291735 88 / 112 conP: 0.394 CATH-TRUNC VNG19051 cluster03 -> 1cpq00 10.786015 129 / 112 conP: 0.520 CATH-ID: 1.20.120.10 Cytochrome c'. Chain: null VNG19051 cluster04 -> 1aj300 11.392354 98 / 112 conP: 0.610 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: null. Fragment: 16th repeat, residues 1772 - 18 --end-- VNG1910h one-of-top-five-correct: 0.324802555048576 CThresh: 6.258161 75 best_is: cluster10 VNG1910h cluster00 -> 1d1dA1 7.5600876 140 / 87 conP: 0.219 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG1910h cluster01 -> 1regX0 8.1110111 122 / 87 conP: 0.275 CATH-ID: 3.30.70.650 T4 rega. Chain: x, y VNG1910h cluster02 -> 1fm2A0 6.4150685 151 / 87 conP: 0.156 CATH-ID: 1.10.439.10 Glutaryl 7-aminocephalosporanic acid acylase. Chain: a. Fragment: alph VNG1910h cluster03 -> 1b91A0 7.3628783 118 / 87 conP: 0.240 CATH-ID: 1.20.920.10 Histone acetyltransferase. Chain: a. Fragment: bromodomain. Engineered VNG1910h cluster04 -> 1d1dA1 6.1796227 140 / 87 conP: 0.158 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG1910h cluster10 -> 1a6dA1 8.1517154 244 / 87 conP: 0.126 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer --end-- VNG19110 one-of-top-five-correct: 0.680151832782366 CThresh: 3.928267 75 best_is: cluster02 VNG19110 cluster00 -> 1qd1B2 8.1590693 145 / 98 conP: 0.399 CATH-ID: 3.30.70.670 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG19110 cluster01 -> 1cfyA0 9.6703216 133 / 98 conP: 0.528 CATH-ID: 3.40.20.10 Cofilin. Chain: a, b. Engineered: yes VNG19110 cluster02 -> 1fg3A 10.913331 351 / 98 conP: 0.253 CATH-TRUNC VNG19110 cluster03 -> 1b4bA0 7.0283659 71 / 98 conP: 0.449 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c. Fragment: oligomerization domain, VNG19110 cluster04 -> 1hka00 7.3982966 158 / 98 conP: 0.327 CATH-ID: 3.30.70.560 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase. Chain: null. Syno --end-- VNG1916h one-of-top-five-correct: 0.1281067447937 CThresh: 9.047604 25 best_is: cluster15 VNG1916h cluster00 -> 1qqnA2 4.9598341 55 / 112 conP: 0.154 CATH-ID: 3.30.30.30 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG1916h cluster01 -> 1lea00 5.0130970 72 / 112 conP: 0.143 CATH-ID: 1.10.10.10 Lexa repressor DNA binding domain (nmr, minimized average structure) VNG1916h cluster02 -> 1ekcC0 5.1251596 50 / 112 conP: 0.165 CATH-ID: 4.10.640.10 30s ribosomal protein s6. Chain: a, f. 30s ribosomal protein s15. Chai VNG1916h cluster03 -> 1a5t03 5.3687422 116 / 112 conP: 0.123 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG1916h cluster04 -> 1kouA 5.0208818 119 / 112 conP: 0.111 NO-CATH VNG1916h cluster15 -> 2hhmA1 5.6007064 142 / 112 conP: 0.113 CATH-ID: 3.30.540.10 Human inositol monophosphatase dimer complex with gadolinium and sulfa --end-- VNG1917h one-of-top-five-correct: 0.304085027634584 CThresh: 7.789682 25 best_is: cluster13 VNG1917h cluster00 -> 1g6uA0 5.4346007 48 / 116 conP: 0.232 CATH-ID: 1.20.15.270 Domain swapped dimer. Chain: a, b. Engineered: yes VNG1917h cluster01 -> 1pbgA0 5.8777257 454 / 116 conP: 0.029 CATH-ID: 3.20.20.80 6-phospho-beta-d-galactosidase. Chain: a, b. Synonym: pgal. Engineered VNG1917h cluster02 -> 1cb5A 6.1889379 453 / 116 conP: 0.032 NO-CATH VNG1917h cluster03 -> 1qqnA4 6.4703156 84 / 116 conP: 0.247 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG1917h cluster04 -> 1ofgA2 7.0336528 190 / 116 conP: 0.169 CATH-ID: 3.30.360.10 Glucose-fructose oxidoreductase. Chain: a, b, c, d, e, f. Ec: 1.1.99.2 VNG1917h cluster13 -> 1epmE2 7.9227661 149 / 116 conP: 0.252 CATH-ID: 2.40.70.10 Endothia aspartic proteinase (endothiapepsin) complexed with ps2 (thr --end-- VNG1919h one-of-top-five-correct: 0.612694364808067 CThresh: 6.506086 75 best_is: cluster06 VNG1919h cluster00 -> 1cb5A 8.3012550 453 / 118 conP: 0.078 NO-CATH VNG1919h cluster01 -> 1d5aA5 8.1884300 54 / 118 conP: 0.467 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG1919h cluster02 -> 1csh01 6.5041717 306 / 118 conP: 0.108 CATH-ID: 1.10.580.10 Citrate synthase complexed with oxaloacetate and amidocarboxymethyldet VNG1919h cluster03 -> 1d5aA5 7.5053070 54 / 118 conP: 0.419 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG1919h cluster04 -> 256bA0 8.9389610 106 / 118 conP: 0.445 CATH-ID: 1.20.120.10 Cytochrome b562 (oxidized) VNG1919h cluster06 -> 1cb5A 10.817172 453 / 118 conP: 0.149 NO-CATH --end-- VNG1921h one-of-top-five-correct: 0.556729907354777 CThresh: 7.708612 25 best_is: cluster06 VNG1921h cluster00 -> 1fewA0 7.5388339 173 / 127 conP: 0.238 CATH-ID: 1.20.1040.20 Second mitochondria-derived activator of caspases. Chain: a. Fragment: VNG1921h cluster01 -> 1ytfB0 6.7979811 46 / 127 conP: 0.337 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG1921h cluster02 -> 1debA0 7.9607224 54 / 127 conP: 0.405 CATH-ID: 1.20.5.10 Adenomatous polyposis coli protein. Chain: a, b. Fragment: n-terminal VNG1921h cluster03 -> 1ytfD1 6.8740461 53 / 127 conP: 0.334 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG1921h cluster04 -> 1rpo00 6.0514009 61 / 127 conP: 0.274 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid VNG1921h cluster06 -> 1dg3A1 10.525901 300 / 127 conP: 0.269 CATH-ID: 1.20.1000.10 Interferon-induced guanylate-binding protein 1. Chain: a. Fragment: fu --end-- VNG1925h one-of-top-five-correct: 0.310130693910478 CThresh: 3.082601 75 best_is: cluster05 VNG1925h cluster00 -> 1tif00 5.5017794 76 / 54 conP: 0.226 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid VNG1925h cluster01 -> 1gdoA0 5.4559380 238 / 54 conP: 0.034 CATH-ID: 3.60.20.10 Glucosamine 6-phosphate synthase. Chain: a, b, c, d. Fragment: glutami VNG1925h cluster02 -> 1dik06 7.0498917 98 / 54 conP: 0.255 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG1925h cluster03 -> 1qcsA2 6.3667687 102 / 54 conP: 0.211 CATH-ID: 3.10.330.10 N-ethylmaleimide sensitive factor (nsf-n). Chain: a. Fragment: n-termi VNG1925h cluster04 -> 1tif00 6.5262976 76 / 54 conP: 0.282 CATH-ID: 3.10.20.80 Translation initiation factor 3. Chain: null. Domain: n-terminal resid VNG1925h cluster05 -> 1kh0A 7.2775994 65 / 54 conP: 0.360 NO-CATH --end-- VNG1927h one-of-top-five-correct: 0.592996271683564 CThresh: 6.919738 35 best_is: cluster02 VNG1927h cluster00 -> 2lisA0 10.466496 131 / 107 conP: 0.455 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG1927h cluster01 -> 2lisA0 6.9941987 131 / 107 conP: 0.235 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG1927h cluster02 -> 2lisA0 11.029978 131 / 107 conP: 0.496 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG1927h cluster03 -> 1qovL1 7.3266990 163 / 107 conP: 0.215 CATH-ID: 1.20.85.10 Photosynthetic reaction center. Chain: l, m, h. Engineered: yes. Mutat VNG1927h cluster04 -> 1a36A5 7.7281079 72 / 107 conP: 0.358 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain --end-- VNG19331 one-of-top-five-correct: 0.407390344180333 CThresh: 3.074100 75 best_is: cluster10 VNG19331 cluster00 -> 1c3uA3 5.7214313 82 / 60 conP: 0.250 CATH-ID: 1.10.164.30 Adenylosuccinate lyase. Chain: a, b. Engineered: yes VNG19331 cluster01 -> 1ctf00 5.1753591 68 / 60 conP: 0.251 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG19331 cluster02 -> 1ibrB0 4.9903646 458 / 60 conP: 0.003 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG19331 cluster03 -> 1jkw02 6.3599855 101 / 60 conP: 0.243 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG19331 cluster04 -> 1k46A 5.2109993 124 / 60 conP: 0.150 CATH-TRUNC VNG19331 cluster10 -> 1eo0A0 8.2998853 77 / 60 conP: 0.427 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En --end-- VNG19371 one-of-top-five-correct: 0.313996086995997 CThresh: 4.460079 75 best_is: cluster13 VNG19371 cluster00 -> 2rig_ 5.5319096 119 / 69 conP: 0.160 NO-CATH VNG19371 cluster01 -> 1ifa_ 5.9550050 158 / 69 conP: 0.127 NO-CATH VNG19371 cluster02 -> 1put00 5.3174554 106 / 69 conP: 0.170 CATH-ID: 3.10.20.30 Putidaredoxin (nmr, 12 structures) VNG19371 cluster03 -> 1alo02 4.8164576 119 / 69 conP: 0.135 CATH-ID: 1.10.150.120 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG19371 cluster04 -> 1e9hA 6.8011957 295 / 69 conP: 0.044 NO-CATH VNG19371 cluster13 -> 1fchA0 7.6100354 302 / 69 conP: 0.052 CATH-ID: 1.25.40.140 Peroxisomal targeting signal 1 receptor. Chain: a, b. Fragment: c-term --end-- VNG19382 one-of-top-five-correct: 0.313275263313862 CThresh: 6.945326 75 best_is: cluster18 VNG19382 cluster00 -> 1dceA1 7.1776725 317 / 100 conP: 0.073 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG19382 cluster01 -> 1d5aA5 6.3667687 54 / 100 conP: 0.282 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG19382 cluster02 -> 1ec5A0 6.2100330 48 / 100 conP: 0.281 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG19382 cluster03 -> 1bgf00 5.6162294 124 / 100 conP: 0.162 CATH-ID: 1.10.532.10 Stat-4. Chain: null. Fragment: n-terminal domain. Engineered: yes. Bio VNG19382 cluster04 -> 1d2dA0 7.6230167 56 / 100 conP: 0.357 CATH-ID: 1.10.287.10 tRNA synthetase. Chain: a. Fragment: residue 1 - 59. Synonym: tRNA lig VNG19382 cluster18 -> 2hmqA0 8.0220718 113 / 100 conP: 0.295 CATH-ID: 1.20.120.50 Hemerythrin (met) --end-- VNG1940h one-of-top-five-correct: 0.367495384997444 CThresh: 6.256334 75 best_is: cluster15 VNG1940h cluster00 -> 1onrA0 6.8042272 316 / 80 conP: 0.040 CATH-ID: 3.20.20.70 Transaldolase b. Chain: a, b. Engineered: yes VNG1940h cluster01 -> 1bt4A2 6.3061950 104 / 80 conP: 0.188 CATH-ID: 3.30.70.160 Phosphoserine aminotransferase. Chain: a. Fragment: one complete subun VNG1940h cluster02 -> 1faeA1 7.8023611 425 / 80 conP: 0.021 CATH-ID: 1.50.10.10 Endo-1,4-beta-glucanase f. Chain: a. Fragment: catalytic module. Synon VNG1940h cluster03 -> 1d7uA1 7.2998633 141 / 80 conP: 0.182 CATH-ID: 3.30.70.160 2,2-dialkylglycine decarboxylase (pyruvate). Chain: a. Synonym: dgd. E VNG1940h cluster04 -> 1fbaA0 8.4225744 360 / 80 conP: 0.043 CATH-ID: 3.20.20.70 Fructose-1,6-bisphosphate aldolase VNG1940h cluster15 -> 1fbaA0 8.8271612 360 / 80 conP: 0.048 CATH-ID: 3.20.20.70 Fructose-1,6-bisphosphate aldolase --end-- VNG19411 one-of-top-five-correct: 0.413116145749853 CThresh: 3.000549 76 best_is: cluster16 VNG19411 cluster00 -> 1ezfA 7.2453360 323 / 59 conP: 0.029 NO-CATH VNG19411 cluster01 -> 1uroA0 7.0235859 357 / 59 conP: 0.018 CATH-ID: 3.20.20.210 Uroporphyrinogen decarboxylase. Chain: a. Synonym: uro-d, urod. Engine VNG19411 cluster02 -> 1glqA2 6.8018358 108 / 59 conP: 0.250 CATH-ID: 1.20.1050.10 Glutathione s-transferase yfyf (class pi) complexed with s-(p-nitroben VNG19411 cluster03 -> 1uby00 7.2453360 348 / 59 conP: 0.021 CATH-ID: 1.10.600.10 Farnesyl diphosphate synthase. Chain: null. Synonym: fps. Engineered: VNG19411 cluster04 -> 1uroA0 6.8018358 357 / 59 conP: 0.017 CATH-ID: 3.20.20.210 Uroporphyrinogen decarboxylase. Chain: a. Synonym: uro-d, urod. Engine VNG19411 cluster16 -> 1dn1A3 8.3540866 120 / 59 conP: 0.311 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. --end-- VNG1942h one-of-top-five-correct: 0.218306818457918 CThresh: 8.131528 25 best_is: cluster01 VNG1942h cluster00 -> 2u1a00 6.2123225 88 / 111 conP: 0.206 CATH-ID: 3.30.70.330 U1 small nuclear ribonucleoprotein a. Chain: null. Fragment: RNA bindi VNG1942h cluster01 -> 1g6wA2 6.9662048 137 / 111 conP: 0.191 CATH-ID: 1.20.1050.10 Ure2 protein. Chain: a, b, c, d. Fragment: globular domain (residues 9 VNG1942h cluster02 -> 2a3dA0 4.7743555 73 / 111 conP: 0.158 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG1942h cluster03 -> 1kdxA0 4.7544435 81 / 111 conP: 0.151 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG1942h cluster04 -> 1afi00 4.9220769 72 / 111 conP: 0.165 CATH-ID: 3.30.70.100 Merp. Chain: null. Synonym: mercuric transport protein. Engineered: me --end-- VNG1943h one-of-top-five-correct: 0.406277268287297 CThresh: 2.554926 100 best_is: cluster14 VNG1943h cluster00 -> 1aab00 6.3667687 83 / 54 conP: 0.278 CATH-ID: 1.10.30.10 High mobility group protein. Chain: null. Fragment: fragment a (residu VNG1943h cluster01 -> 1ft1B0 5.6836457 416 / 54 conP: 0.004 CATH-ID: 1.50.10.40 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG1943h cluster02 -> 1a5t03 6.8221840 116 / 54 conP: 0.223 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG1943h cluster03 -> 1bo4A0 6.5944764 137 / 54 conP: 0.170 CATH-ID: 3.40.630.30 Serratia marcescens aminoglycoside-3-n- acetyltransferase. Chain: a, b VNG1943h cluster04 -> 1ykfA1 6.8221840 221 / 54 conP: 0.068 CATH-ID: 3.90.180.10 NADP-dependent alcohol dehydrogenase. Chain: a, b, c, d. Engineered: y VNG1943h cluster14 -> 1a0b00 8.1884300 117 / 54 conP: 0.295 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment --end-- VNG1944c one-of-top-five-correct: 0.793981561278623 CThresh: 2.651817 100 best_is: cluster05 VNG1944c cluster00 -> 1cpzA0 9.8165110 68 / 83 conP: 0.672 CATH-ID: 3.30.70.100 Copz. Chain: a. Engineered: yes. Mutation: yes. Other_details: n-termi VNG1944c cluster01 -> 5rubA1 8.1028263 121 / 83 conP: 0.445 CATH-ID: 3.30.70.150 Rubisco (ribulose-1,5-bisphosphate carboxylase(slash)oxygenase) VNG1944c cluster02 -> 1hrkA 6.8084402 359 / 83 conP: 0.069 NO-CATH VNG1944c cluster03 -> 1cg2A2 8.1969984 110 / 83 conP: 0.474 CATH-ID: 3.30.70.360 Carboxypeptidase g2. Chain: a, b, c, d. Engineered: yes. Biological_un VNG1944c cluster04 -> 1aps00 11.903731 98 / 83 conP: 0.744 CATH-ID: 3.30.70.100 Acylphosphatase (nmr, 5 structures) --end-- VNG19460 one-of-top-five-correct: 0.443046132172503 CThresh: 4.682273 75 best_is: cluster06 VNG19460 cluster00 -> 1fiy02 6.8143236 374 / 98 conP: 0.069 CATH-ID: 3.20.20.60 Phosphoenolpyruvate carboxylase. Chain: null. Synonym: pepc. Engineere VNG19460 cluster01 -> 1lre00 7.8563439 81 / 98 conP: 0.448 CATH-ID: 1.20.81.10 Receptor-associated protein. Chain: null. Fragment: n-terminal domain, VNG19460 cluster02 -> 1fiy02 7.0179102 374 / 98 conP: 0.073 CATH-ID: 3.20.20.60 Phosphoenolpyruvate carboxylase. Chain: null. Synonym: pepc. Engineere VNG19460 cluster03 -> 1a6dA1 6.2571375 244 / 98 conP: 0.138 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer VNG19460 cluster04 -> 1g5cA0 6.6375239 169 / 98 conP: 0.234 CATH-ID: 3.40.1050.10 Beta-carbonic anhydrase. Chain: a, b, c, d, e, f. Engineered: yes VNG19460 cluster06 -> 1aw000 8.5634959 72 / 98 conP: 0.515 CATH-ID: 3.30.70.100 Menkes copper-transporting atpase. Chain: null. Fragment: fourth metal --end-- VNG19512 one-of-top-five-correct: 0.176540315138868 CThresh: 8.089323 25 best_is: cluster14 VNG19512 cluster00 -> 1hz6A0 5.1756703 67 / 103 conP: 0.169 CATH-ID: 3.10.20.210 Protein l. Chain: a, b, c. Fragment: b1 domain. Synonym: ig kappa ligh VNG19512 cluster01 -> 1vhbA0 5.3787379 135 / 103 conP: 0.119 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a, b. Synonym: soluble cytochrome o. Engineered: ye VNG19512 cluster02 -> 4rhn00 4.5100516 115 / 103 conP: 0.108 CATH-ID: 3.30.428.10 Histidine triad nucleotide-binding protein. Chain: null. Synonym: hint VNG19512 cluster03 -> 1dlwA0 5.9745428 116 / 103 conP: 0.155 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a. Engineered: yes VNG19512 cluster04 -> 1repC2 5.4803837 91 / 103 conP: 0.159 CATH-ID: 1.10.10.10 DNA (5'- d( Cp Cp Tp Gp Tp Gp Ap Cp Ap Ap Ap Tp Tp Gp Cp Cp Cp Tp Cp A VNG19512 cluster14 -> 1dik06 6.4054039 98 / 103 conP: 0.190 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y --end-- VNG1954h one-of-top-five-correct: 0.211438914258561 CThresh: 6.974527 42 best_is: cluster01 VNG1954h cluster00 -> 1uaaA4 4.8242973 162 / 92 conP: 0.091 CATH-ID: 1.10.486.10 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG1954h cluster01 -> 1mml02 6.7626762 146 / 92 conP: 0.166 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes VNG1954h cluster02 -> 1ibrB0 6.2619914 458 / 92 conP: 0.016 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG1954h cluster03 -> 1tplA1 4.4543047 181 / 92 conP: 0.073 CATH-ID: 3.30.70.160 Tyrosine phenol-lyase VNG1954h cluster04 -> 1h75A0 5.9364206 76 / 92 conP: 0.211 CATH-ID: 3.40.30.10 Protein nrdh. Chain: a. Engineered: yes --end-- VNG19572 one-of-top-five-correct: 0.240932463724043 CThresh: 6.989470 40 best_is: cluster05 VNG19572 cluster00 -> 1fehA5 5.3115122 211 / 90 conP: 0.070 CATH-ID: 3.40.950.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG19572 cluster01 -> 1hfeL3 5.8970753 143 / 90 conP: 0.132 CATH-ID: 3.40.950.10 Fe-only hydrogenase (smaller subunit). Chain: s, t. Other_details: the VNG19572 cluster02 -> 1qp8A2 4.9211369 179 / 90 conP: 0.080 CATH-ID: 3.40.50.720 Formate dehydrogenase. Chain: a, b. Engineered: yes. Biological_unit: VNG19572 cluster03 -> 1fehA5 5.2374469 211 / 90 conP: 0.069 CATH-ID: 3.40.950.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG19572 cluster04 -> 1iawA 4.7259492 304 / 90 conP: 0.030 CATH-TRUNC VNG19572 cluster05 -> 1gtxA1 7.2768195 167 / 90 conP: 0.158 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. --end-- VNG1960h one-of-top-five-correct: 0.365810958126858 CThresh: 3.008949 98 best_is: cluster17 VNG1960h cluster00 -> 1bpoA1 5.6392203 332 / 55 conP: 0.012 CATH-ID: 2.130.30.10 Clathrin. Chain: a, b, c. Fragment: terminal domain and linker. Engine VNG1960h cluster01 -> 1im3D 5.6392203 95 / 55 conP: 0.199 NO-CATH VNG1960h cluster02 -> 1erjA0 6.5450685 350 / 55 conP: 0.012 CATH-ID: 2.130.10.20 Transcriptional repressor tup1. Chain: a, b, c. Fragment: c-terminal w VNG1960h cluster03 -> 2ncm00 6.3186065 99 / 55 conP: 0.223 CATH-ID: 2.60.40.10 Neural cell adhesion molecule. Chain: null. Fragment: domain 1. Synony VNG1960h cluster04 -> 1gof02 5.6392203 388 / 55 conP: 0.006 CATH-ID: 2.130.20.10 Galactose oxidase (ph 4.5) VNG1960h cluster17 -> 1erjA0 7.9038409 350 / 55 conP: 0.018 CATH-ID: 2.130.10.20 Transcriptional repressor tup1. Chain: a, b, c. Fragment: c-terminal w --end-- VNG19691 one-of-top-five-correct: 0.541082422322664 CThresh: 3.702854 75 best_is: cluster06 VNG19691 cluster00 -> 1fts01 9.5578573 84 / 73 conP: 0.527 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG19691 cluster01 -> 1fc3A0 5.8142472 119 / 73 conP: 0.213 CATH-ID: 1.10.10.60 Spo0a. Chain: a, b, c. Fragment: c-terminal domain. Synonym: sporulati VNG19691 cluster02 -> 1h97A0 6.2216130 147 / 73 conP: 0.189 CATH-ID: 1.10.490.10 Globin-3. Chain: a, b. Engineered: yes. Synonym: myoglobin, hemoglobin VNG19691 cluster03 -> 1qrjB1 7.0621172 114 / 73 conP: 0.289 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG19691 cluster04 -> 1fts01 8.7259440 84 / 73 conP: 0.467 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG19691 cluster06 -> 1fts01 9.7658357 84 / 73 conP: 0.542 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: --end-- VNG19710 one-of-top-five-correct: 0.354247617780582 CThresh: 6.982465 35 best_is: cluster01 VNG19710 cluster00 -> 1qmgA1 5.5287063 219 / 113 conP: 0.112 CATH-ID: 3.40.50.720 Acetohydroxy-acid isomeroreductase. Chain: a, b, c, d. Synonym: keto-a VNG19710 cluster01 -> 1bmtA1 8.2477917 87 / 113 conP: 0.384 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG19710 cluster02 -> 1b6rA1 5.9188440 70 / 113 conP: 0.261 CATH-ID: 3.40.50.20 N5-carboxyaminoimidazole ribonucleotide synthetase. Chain: a. Synonym: VNG19710 cluster03 -> 1dih01 6.4392235 164 / 113 conP: 0.187 CATH-ID: 3.40.50.720 Dihydrodipicolinate reductase. Chain: null. Engineered: yes VNG19710 cluster04 -> 1aa7A1 7.8545729 79 / 113 conP: 0.369 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer --end-- VNG19724 one-of-top-five-correct: 0.444771381126903 CThresh: 5.392929 75 best_is: cluster00 VNG19724 cluster00 -> 1jflA 9.1781633 228 / 86 conP: 0.206 CATH-TRUNC VNG19724 cluster01 -> 1cbf01 6.4434328 118 / 86 conP: 0.224 CATH-ID: 3.40.1010.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m VNG19724 cluster02 -> 1l6sA 6.8033273 322 / 86 conP: 0.057 CATH-TRUNC VNG19724 cluster03 -> 1b73A1 8.0586480 143 / 86 conP: 0.273 CATH-ID: 3.40.50.1860 Glutamate racemase. Chain: a. Ec: 5.1.1.3 VNG19724 cluster04 -> 1hyhA1 6.3503040 141 / 86 conP: 0.189 CATH-ID: 3.40.50.720 L-2-hydroxyisocaproate dehydrogenase. Chain: a, b, c, d. Synonym: l-hi --end-- VNG1976h one-of-top-five-correct: 0.294642427384357 CThresh: 5.262474 75 best_is: cluster02 VNG1976h cluster00 -> 1e39A3 5.0370649 320 / 76 conP: 0.025 CATH-ID: 3.50.50.60 Flavocytochrome c3. Chain: a. Engineered: yes. Mutation: yes VNG1976h cluster01 -> 1bjaA0 5.9205319 95 / 76 conP: 0.207 CATH-ID: 1.10.10.10 Transcription regulatory protein mota. Chain: a, b. Fragment: n-termin VNG1976h cluster02 -> 1aorA2 7.5642157 186 / 76 conP: 0.153 CATH-ID: 1.10.569.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri VNG1976h cluster03 -> 1b7eA2 4.4012736 126 / 76 conP: 0.112 CATH-ID: 1.10.740.10 Transposase inhibitor protein from tn5. Chain: a. Engineered: yes VNG1976h cluster04 -> 2yhx_ 5.0986900 457 / 76 conP: 0.007 NO-CATH --end-- VNG1978h one-of-top-five-correct: 0.329183843356695 CThresh: 7.937260 25 best_is: cluster17 VNG1978h cluster00 -> 1brrA0 5.7852641 230 / 138 conP: 0.135 CATH-ID: 1.20.85.10 Bacteriorhodopsin. Chain: a, b, c. Synonym: br. Other_details: schiff VNG1978h cluster01 -> 1bucA3 6.6100605 141 / 138 conP: 0.237 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG1978h cluster02 -> 1grj01 6.1920952 74 / 138 conP: 0.279 CATH-ID: 1.20.15.150 Grea transcript cleavage factor from escherichia coli VNG1978h cluster03 -> 1hryA0 5.2110557 73 / 138 conP: 0.227 CATH-ID: 1.10.30.10 Human sry. Chain: a. DNA. Chain: b. Engineered: yes VNG1978h cluster04 -> 1lfb00 5.6084551 77 / 138 conP: 0.244 CATH-ID: 1.10.10.60 Transcription factor lfb1 (homeodomain) VNG1978h cluster17 -> 2occC2 7.8064160 191 / 138 conP: 0.254 CATH-ID: 1.20.120.80 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG19850 one-of-top-five-correct: 0.382570199974425 CThresh: 6.969157 61 best_is: cluster09 VNG19850 cluster00 -> 1jkw02 7.0706370 101 / 117 conP: 0.300 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG19850 cluster01 -> 14psA0 6.8874298 226 / 117 conP: 0.161 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG19850 cluster02 -> 1jgiA 6.7072530 628 / 117 conP: 0.016 NO-CATH VNG19850 cluster03 -> 1qo0D2 5.9178330 46 / 117 conP: 0.299 CATH-ID: 1.10.15.10 Amic. Chain: a, b. Fragment: amide receptor. Engineered: yes. Other_de VNG19850 cluster04 -> 1mroB2 8.3288441 295 / 117 conP: 0.162 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG19850 cluster09 -> 1aab00 8.4840188 83 / 117 conP: 0.418 CATH-ID: 1.10.30.10 High mobility group protein. Chain: null. Fragment: fragment a (residu --end-- VNG19871 one-of-top-five-correct: 0.173430118748298 CThresh: 6.529512 75 best_is: cluster05 VNG19871 cluster00 -> 1mai00 5.6730280 119 / 84 conP: 0.146 CATH-ID: 2.30.29.30 PhospholipasE C delta-1. Chain: null. Fragment: pleckstrin homology do VNG19871 cluster01 -> 1aua01 4.9192454 213 / 84 conP: 0.059 CATH-ID: 3.40.525.10 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG19871 cluster02 -> 1sbp01 5.7879900 151 / 84 conP: 0.119 CATH-ID: 3.40.190.10 Sulfate-binding protein VNG19871 cluster03 -> 1mdyA0 5.3544058 68 / 84 conP: 0.193 CATH-ID: 4.10.280.10 Myod basic-helix-loop-helix (bhlh) domain (residues 102 - 166) mutant VNG19871 cluster04 -> 1qqnA3 4.9192454 89 / 84 conP: 0.150 CATH-ID: 3.30.420.50 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG19871 cluster05 -> 1jouB 6.0716718 231 / 84 conP: 0.070 CATH-TRUNC --end-- VNG19931 one-of-top-five-correct: 0.643309107665581 CThresh: 6.166036 75 best_is: cluster17 VNG19931 cluster00 -> 1e7aA1 9.5665753 103 / 101 conP: 0.459 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG19931 cluster01 -> 1jwfA 7.8747635 139 / 101 conP: 0.288 NO-CATH VNG19931 cluster02 -> 1qdbA 6.9324978 473 / 101 conP: 0.030 NO-CATH VNG19931 cluster03 -> 1jgjA0 8.6373198 217 / 101 conP: 0.227 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG19931 cluster04 -> 1sqc01 7.0429446 347 / 101 conP: 0.070 CATH-ID: 1.50.10.20 Squalene-hopene cyclase. Chain: null. Engineered: yes. Biological_unit VNG19931 cluster17 -> 2ng101 11.408957 89 / 101 conP: 0.614 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp --end-- VNG1994c one-of-top-five-correct: 0.289212880058722 CThresh: 6.036652 75 best_is: cluster02 VNG1994c cluster00 -> 1fehA2 5.4960471 50 / 108 conP: 0.295 CATH-ID: 4.10.620.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG1994c cluster01 -> 1f1sA 6.1915577 814 / 108 conP: 0.004 NO-CATH VNG1994c cluster02 -> 1gjwA 7.1147516 636 / 108 conP: 0.015 NO-CATH VNG1994c cluster03 -> 1c82A 6.3761965 719 / 108 conP: 0.007 NO-CATH VNG1994c cluster04 -> 1jwfA 5.8264425 139 / 108 conP: 0.205 NO-CATH --end-- VNG1995c one-of-top-five-correct: 0.274981604667241 CThresh: 5.433922 75 best_is: cluster09 VNG1995c cluster00 -> 1dxrH2 6.9616354 139 / 78 conP: 0.191 CATH-ID: 3.90.50.10 Photosynthetic reaction center cytochromE C subun chain: c. Photosynth VNG1995c cluster01 -> 1mb100 5.6878335 98 / 78 conP: 0.191 CATH-ID: 3.10.260.10 Mlu1-box binding protein. Chain: null. Fragment: DNA-binding domain. S VNG1995c cluster02 -> 1d5aA3 5.2440298 163 / 78 conP: 0.104 CATH-ID: 3.30.70.510 DNA polymerase. Chain: a. Engineered: yes VNG1995c cluster03 -> 1obpA0 7.2825408 158 / 78 conP: 0.180 CATH-ID: 2.40.128.20 Odorant-binding protein. Chain: a, b. Synonym: obp VNG1995c cluster04 -> 1fecA3 5.7644699 126 / 78 conP: 0.158 CATH-ID: 3.30.390.30 Trypanothione reductase. Chain: a, b. Engineered: yes. Biological_unit VNG1995c cluster09 -> 1dxrH2 7.3321155 139 / 78 conP: 0.208 CATH-ID: 3.90.50.10 Photosynthetic reaction center cytochromE C subun chain: c. Photosynth --end-- VNG1998h one-of-top-five-correct: 0.341405963969929 CThresh: 7.651266 25 best_is: cluster07 VNG1998h cluster00 -> 1amp00 6.7369108 291 / 120 conP: 0.102 CATH-ID: 3.40.630.10 Aminopeptidase (aeromonas proteolytica) VNG1998h cluster01 -> 1gal03 6.2803302 267 / 120 conP: 0.103 CATH-ID: 3.30.560.10 Glucose oxidase VNG1998h cluster02 -> 1fjgC1 6.4530482 91 / 120 conP: 0.252 CATH-TRUNC VNG1998h cluster03 -> 1atlA0 6.9775182 200 / 120 conP: 0.172 CATH-ID: 3.40.390.10 Atrolysin c. Chain: a, b, c, d. Synonym: hemorrhagic toxin c, form d. VNG1998h cluster04 -> 1sesA2 6.4591167 318 / 120 conP: 0.082 CATH-ID: 3.40.690.10 Seryl-tRNA synthetase (serine-tRNA ligase) complexed with seryl-hydrox VNG1998h cluster07 -> 1pda03 8.2367199 87 / 120 conP: 0.366 CATH-ID: 3.30.160.40 Porphobilinogen deaminase --end-- VNG20000 one-of-top-five-correct: 0.395996177649112 CThresh: 6.159397 75 best_is: cluster13 VNG20000 cluster00 -> 1ibrB0 6.2932594 458 / 95 conP: 0.022 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG20000 cluster01 -> 256bA0 7.9825017 106 / 95 conP: 0.325 CATH-ID: 1.20.120.10 Cytochrome b562 (oxidized) VNG20000 cluster02 -> 1bkdS2 5.3787763 242 / 95 conP: 0.077 CATH-ID: 1.10.840.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y VNG20000 cluster03 -> 1ej3A0 5.0484677 187 / 95 conP: 0.102 CATH-ID: 1.10.238.10 Aequorin. Chain: a, b. Engineered: yes VNG20000 cluster04 -> 1amoA3 5.9484405 126 / 95 conP: 0.188 CATH-ID: 1.20.990.10 NADPH-cytochrome p450 reductase. Chain: a, b. Fragment: hydrophilic do VNG20000 cluster13 -> 1cpy02 8.7723429 72 / 95 conP: 0.438 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a --end-- VNG2008h one-of-top-five-correct: 0.582491840226725 CThresh: 4.128815 75 best_is: cluster15 VNG2008h cluster00 -> 1cm5A0 7.8147917 759 / 116 conP: 0.018 CATH-ID: 3.20.70.30 Pyruvate formate-lyase. Chain: a, b. Synonym: pfl. Mutation: yes. Othe VNG2008h cluster01 -> 1jinA0 6.3695883 403 / 116 conP: 0.096 CATH-ID: 1.10.630.10 Cytochrome p450 107a1. Chain: a. Synonym: 6-deoxyerythronolide b hydro VNG2008h cluster02 -> 1cuk03 6.9175592 48 / 116 conP: 0.514 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes VNG2008h cluster03 -> 1fnnA1 6.3278538 101 / 116 conP: 0.394 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG2008h cluster04 -> 1aqt02 5.7897824 47 / 116 conP: 0.435 CATH-ID: 1.20.15.20 Atp synthase. Chain: null. Fragment: epsilon chain. Engineered: yes. M VNG2008h cluster15 -> 1auwA2 9.4406456 228 / 116 conP: 0.425 CATH-ID: 1.20.200.10 Delta 2 crystallin. Chain: a, b, c, d. Engineered: yes. Mutation: h89n --end-- VNG20120 one-of-top-five-correct: 0.416398238366003 CThresh: 3.770788 75 best_is: cluster05 VNG20120 cluster00 -> 1bix00 7.3587552 275 / 76 conP: 0.095 CATH-ID: 3.60.10.10 Ap endonuclease 1. Chain: null. Engineered: yes. Biological_unit: mono VNG20120 cluster01 -> 1mml02 7.9149710 146 / 76 conP: 0.289 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes VNG20120 cluster02 -> 1d0nA6 6.9478343 127 / 76 conP: 0.268 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG20120 cluster03 -> 1d0nA3 7.9751366 121 / 76 conP: 0.342 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG20120 cluster04 -> 1d0nA3 7.3587552 121 / 76 conP: 0.303 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG20120 cluster05 -> 1mml02 8.3533170 146 / 76 conP: 0.315 CATH-ID: 3.30.70.270 Mmlv reverse transcriptase. Chain: null. Engineered: yes --end-- VNG2014h one-of-top-five-correct: 0.428285046337838 CThresh: 4.583406 75 best_is: cluster14 VNG2014h cluster00 -> 1fts01 6.6464834 84 / 82 conP: 0.314 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG2014h cluster01 -> 1brwA2 7.1374366 272 / 82 conP: 0.096 CATH-ID: 3.40.1030.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 VNG2014h cluster02 -> 6mhtA1 8.2345751 229 / 82 conP: 0.173 CATH-ID: 3.40.50.150 Cytosine-specific methyltransferase hhai. Chain: a. Engineered: yes. B VNG2014h cluster03 -> 1akhB0 6.1685208 78 / 82 conP: 0.295 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG2014h cluster04 -> 1a99A2 5.5311602 174 / 82 conP: 0.133 CATH-ID: 3.40.190.10 Putrescine-binding protein. Chain: a, b, c, d. Synonym: potf. Engineer VNG2014h cluster14 -> 1bm9A0 8.7186135 120 / 82 conP: 0.379 CATH-ID: 1.10.10.10 Replication terminator protein. Chain: a, b. Synonym: rtp, ter. Engine --end-- VNG20200 one-of-top-five-correct: 0.506667089218157 CThresh: 2.694511 100 best_is: cluster01 VNG20200 cluster00 -> 1dq3A4 6.3241633 114 / 83 conP: 0.335 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG20200 cluster01 -> 1ocrE0 8.7029691 109 / 83 conP: 0.511 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG20200 cluster02 -> 1ocrE0 8.1028263 109 / 83 conP: 0.467 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG20200 cluster03 -> 2blmA 7.7027312 260 / 83 conP: 0.179 NO-CATH VNG20200 cluster04 -> 1b24A2 6.4983668 74 / 83 conP: 0.426 CATH-ID: 3.10.28.10 I-dmoi. Chain: a. Engineered: yes. Biological_unit: monomer. Other_det --end-- VNG20201 one-of-top-five-correct: 0.278732988251836 CThresh: 2.614670 100 best_is: cluster09 VNG20201 cluster00 -> 1i60A 6.0060175 272 / 52 conP: 0.025 NO-CATH VNG20201 cluster01 -> 1dnpA3 6.0060175 181 / 52 conP: 0.080 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG20201 cluster02 -> 1tsg00 5.7757296 98 / 52 conP: 0.199 CATH-ID: 3.90.6.10 Tsg-6. Chain: null. Fragment: link module residues 36 - 133. Synonym: VNG20201 cluster03 -> 1akhB0 6.2363054 78 / 52 conP: 0.270 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG20201 cluster04 -> 1cz1A0 5.7757296 394 / 52 conP: 0.005 CATH-ID: 3.20.20.80 Exo-b-(1,3)-glucanase. Chain: a. Engineered: yes VNG20201 cluster09 -> 1iqrA 6.6968813 415 / 52 conP: 0.005 NO-CATH --end-- VNG2024h one-of-top-five-correct: 0.415634262831967 CThresh: 6.506639 75 best_is: cluster08 VNG2024h cluster00 -> 1fuiA2 5.2699685 165 / 87 conP: 0.101 CATH-ID: 3.40.275.10 L-fucose isomerase. Chain: a, b, c, d, e, f. Engineered: yes. Biologic VNG2024h cluster01 -> 1bfmA0 7.3160076 69 / 87 conP: 0.304 CATH-ID: 1.10.20.10 Histone b. Chain: a, b. Synonym: hmfb, rhmfb, archaeal histone. Engine VNG2024h cluster02 -> 1aipC3 6.6450636 53 / 87 conP: 0.291 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG2024h cluster03 -> 1e79A3 5.9578502 131 / 87 conP: 0.152 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG2024h cluster04 -> 1sbp01 5.7852042 151 / 87 conP: 0.127 CATH-ID: 3.40.190.10 Sulfate-binding protein VNG2024h cluster08 -> 1f2eA2 9.3349710 106 / 87 conP: 0.367 CATH-ID: 1.20.1050.10 Glutathione s-transferase. Chain: a, b, c, d. Engineered: yes --end-- VNG2027h one-of-top-five-correct: 0.204157456232458 CThresh: 6.284602 75 best_is: cluster11 VNG2027h cluster00 -> 1irf00 5.4516757 112 / 80 conP: 0.143 CATH-ID: 1.10.10.10 Interferon regulatory factor-2. Chain: null. Fragment: residues 2-113. VNG2027h cluster01 -> 1la1A 5.5904668 192 / 80 conP: 0.080 NO-CATH VNG2027h cluster02 -> 1ax800 5.5904668 130 / 80 conP: 0.130 CATH-ID: 1.20.120.200 Obesity protein. Chain: null. Synonym: leptin. Engineered: yes. Mutati VNG2027h cluster03 -> 1ash00 4.9835866 147 / 80 conP: 0.097 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG2027h cluster04 -> 1qlaB2 5.8280747 122 / 80 conP: 0.146 CATH-ID: 1.10.1060.10 Fumarate reductase flavoprotein subunit. Chain: a, d. Other_details: 8 VNG2027h cluster11 -> 1ezfA 6.6019338 323 / 80 conP: 0.035 NO-CATH --end-- VNG2028h one-of-top-five-correct: 0.15782180478993 CThresh: 9.139025 25 best_is: cluster17 VNG2028h cluster00 -> 1eu8A2 4.0871063 217 / 120 conP: 0.055 CATH-ID: 3.40.190.10 Trehalose/maltose binding protein. Chain: a. Engineered: yes VNG2028h cluster01 -> 1f16A0 4.3136779 192 / 120 conP: 0.067 CATH-ID: 1.10.437.10 Apoptosis regulator bax, membrane isoform alpha. Chain: a. Engineered: VNG2028h cluster02 -> 1tplA2 4.7085772 244 / 120 conP: 0.056 CATH-ID: 3.40.640.10 Tyrosine phenol-lyase VNG2028h cluster03 -> 2gsaA2 5.9227570 249 / 120 conP: 0.076 CATH-ID: 3.40.640.10 Glutamate semialdehyde aminotransferase. Chain: a, b. Synonym: glutama VNG2028h cluster04 -> 1gg4A 5.5091163 430 / 120 conP: 0.025 NO-CATH VNG2028h cluster17 -> 1cuk02 6.1259924 76 / 120 conP: 0.193 CATH-ID: 1.10.150.30 Ruva protein. Chain: null. Engineered: yes --end-- VNG2029h one-of-top-five-correct: 0.250874639211443 CThresh: 8.435945 25 best_is: cluster08 VNG2029h cluster00 -> 1pdnC1 5.7793682 68 / 129 conP: 0.225 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b VNG2029h cluster01 -> 1hstA0 5.1592367 74 / 129 conP: 0.191 CATH-ID: 1.10.10.10 Histone h5 (globular domain) VNG2029h cluster02 -> 1hssA0 5.3265947 111 / 129 conP: 0.168 CATH-ID: 1.10.120.10 0.19 alpha-amylase inhibitor. Chain: a, b, c, d. Biological_unit: dime VNG2029h cluster03 -> 1k56A0 5.3425482 242 / 129 conP: 0.091 CATH-ID: 3.40.710.10 Oxa10 beta-lactamase. Chain: a, b, c. Synonym: beta-lactamase pse-2. E VNG2029h cluster04 -> 1ku3A 5.8992259 61 / 129 conP: 0.238 NO-CATH VNG2029h cluster08 -> 1jud02 7.1915566 75 / 129 conP: 0.296 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG2035h one-of-top-five-correct: 0.414069955203232 CThresh: 3.406139 75 best_is: cluster18 VNG2035h cluster00 -> 1hq0A 6.7063807 295 / 77 conP: 0.076 NO-CATH VNG2035h cluster01 -> 1jkmA0 6.9110299 358 / 77 conP: 0.047 CATH-ID: 3.40.50.950 Brefeldin a esterase. Chain: a, b. Engineered: yes VNG2035h cluster02 -> 1kj3I 7.9586533 278 / 77 conP: 0.121 NO-CATH VNG2035h cluster03 -> 1qj2C2 7.1156790 105 / 77 conP: 0.342 CATH-ID: 3.30.390.50 Carbon monoxide dehydrogenase. Chain: a, g. Carbon monoxide dehydrogen VNG2035h cluster04 -> 1jl0A 6.0057983 309 / 77 conP: 0.056 NO-CATH VNG2035h cluster18 -> 1tys00 8.1389247 264 / 77 conP: 0.141 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) --end-- VNG20371 one-of-top-five-correct: 0.227353306192022 CThresh: 6.948922 52 best_is: cluster09 VNG20371 cluster00 -> 1d5rA1 5.4227019 174 / 92 conP: 0.099 CATH-ID: 3.90.190.10 Phosphoinositide phosphotase pten. Chain: a. Fragment: residues 7-353. VNG20371 cluster01 -> 1fg9C2 4.7344356 113 / 92 conP: 0.125 CATH-ID: 2.60.40.30 Interferon gamma. Chain: a, b. Fragment: 10 c-terminal residues delete VNG20371 cluster02 -> 1br6A1 5.2605548 179 / 92 conP: 0.092 CATH-ID: 3.40.420.10 Ricin. Chain: a. Synonym: rta. Engineered: yes VNG20371 cluster03 -> 1k5hA 4.6788932 398 / 92 conP: 0.016 NO-CATH VNG20371 cluster04 -> 1iow03 5.0989246 73 / 92 conP: 0.178 CATH-ID: 2.30.35.30 D-ala\:d-ala ligase. Chain: null. Synonym: dd-ligase, ddlb. Engineered VNG20371 cluster09 -> 1d0nA3 7.0055398 121 / 92 conP: 0.206 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b --end-- VNG2041h one-of-top-five-correct: 0.235153789032287 CThresh: 8.790201 25 best_is: cluster15 VNG2041h cluster00 -> 1df4A0 5.5533908 57 / 132 conP: 0.215 CATH-ID: 1.20.15.180 HIV-1 envelope glycoprotein gp41. Chain: a. Fragment: residues 1 - 34 VNG2041h cluster01 -> 1ctf00 5.3614155 68 / 132 conP: 0.197 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG2041h cluster02 -> 2pgd02 5.5134753 255 / 132 conP: 0.087 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase (6-pgdh) VNG2041h cluster03 -> 1psrA0 6.5691941 100 / 132 conP: 0.227 CATH-ID: 1.10.238.10 Psoriasin. Chain: a, b. Synonym: s100a7. Engineered: yes. Other_detail VNG2041h cluster04 -> 1qsaA2 5.0763193 70 / 132 conP: 0.183 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG2041h cluster15 -> 1d5aA5 7.0498917 54 / 132 conP: 0.300 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes --end-- VNG2042h one-of-top-five-correct: 0.37501905570308 CThresh: 4.596324 75 best_is: cluster16 VNG2042h cluster00 -> 1fbxA2 7.6613066 136 / 64 conP: 0.200 CATH-ID: 3.50.11.20 Gtp cyclohydrolase i. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG2042h cluster01 -> 1udg00 5.6028249 228 / 64 conP: 0.048 CATH-ID: 3.40.470.10 Uracil-DNA glycosylase. Chain: null. Other_details: encoded by the ul2 VNG2042h cluster02 -> 1uaaA2 5.7137350 74 / 64 conP: 0.219 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG2042h cluster03 -> 1aa7A1 6.7957192 79 / 64 conP: 0.267 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG2042h cluster04 -> 1aihA0 5.4973382 170 / 64 conP: 0.085 CATH-ID: 1.10.443.10 Hp1 integrase. Chain: a, b, c, d. Fragment: catalytic domain, residues VNG2042h cluster16 -> 1bmtA2 8.5268940 158 / 64 conP: 0.202 CATH-ID: 3.40.50.280 Methionine synthase (b12-binding domains) --end-- VNG2044h one-of-top-five-correct: 0.352057297213024 CThresh: 6.453207 75 best_is: cluster15 VNG2044h cluster00 -> 1mugA0 6.7689706 165 / 92 conP: 0.162 CATH-ID: 3.40.470.10 G:t/u specific DNA glycosylase. Chain: a. Engineered: yes VNG2044h cluster01 -> 1l0pA 6.6177654 448 / 92 conP: 0.021 NO-CATH VNG2044h cluster02 -> 1ad4B0 5.4544421 248 / 92 conP: 0.066 CATH-ID: 3.20.20.20 Dihydropteroate synthetase. Chain: a, b. Synonym: dhps. Ec: 2.5.1.15 VNG2044h cluster03 -> 1rpjA1 5.3810028 139 / 92 conP: 0.137 CATH-ID: 3.40.50.8600 Precursor of periplasmic sugar receptor. Chain: a. Synonym: albp. Biol VNG2044h cluster04 -> 2pgd03 4.8089997 38 / 92 conP: 0.225 CATH-ID: 4.10.390.10 6-phosphogluconate dehydrogenase (6-pgdh) VNG2044h cluster15 -> 1toaA2 8.4596973 131 / 92 conP: 0.290 CATH-ID: 3.40.50.1980 Periplasmic binding protein troa. Chain: a, b. Fragment: soluble fract --end-- VNG2054h one-of-top-five-correct: 0.473346469553283 CThresh: 6.931550 48 best_is: cluster13 VNG2054h cluster00 -> 1dusA0 6.0970251 192 / 126 conP: 0.179 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG2054h cluster01 -> 1cpzA0 5.9918494 68 / 126 conP: 0.297 CATH-ID: 3.30.70.100 Copz. Chain: a. Engineered: yes. Mutation: yes. Other_details: n-termi VNG2054h cluster02 -> 1eulA4 6.1567628 156 / 126 conP: 0.213 CATH-ID: 3.40.50.1000 Calcium-transporting atpase sarcoplasmic reticulum type, fast twitch s VNG2054h cluster03 -> 1dusA0 8.0910141 192 / 126 conP: 0.280 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG2054h cluster04 -> 1aipC3 8.0189588 53 / 126 conP: 0.451 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG2054h cluster13 -> 1dc7A0 9.2802331 124 / 126 conP: 0.444 CATH-ID: 3.40.50.3000 Nitrogen regulation protein. Chain: a. Fragment: n-terminal receiver d --end-- VNG20601 one-of-top-five-correct: 0.190881536068764 CThresh: 6.963247 28 best_is: cluster01 VNG20601 cluster00 -> 1ngr00 5.1679007 85 / 95 conP: 0.173 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d VNG20601 cluster01 -> 1ezfA 6.3387906 323 / 95 conP: 0.048 CATH-TRUNC VNG20601 cluster02 -> 1kmeA 4.9947705 227 / 95 conP: 0.065 CATH-TRUNC VNG20601 cluster03 -> 1aipC3 4.1262558 53 / 95 conP: 0.164 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG20601 cluster04 -> 1aru02 3.8427533 163 / 95 conP: 0.074 CATH-ID: 1.10.420.10 Peroxidase. Chain: null. Heterogen: cn. Other_details: ph 7.5 --end-- VNG20651 one-of-top-five-correct: 0.346959572928671 CThresh: 6.130195 75 best_is: cluster09 VNG20651 cluster00 -> 1lbkA 6.5027149 208 / 103 conP: 0.151 CATH-TRUNC VNG20651 cluster01 -> 1mxa01 6.6522829 142 / 103 conP: 0.225 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met VNG20651 cluster02 -> 1a06_ 6.6900444 279 / 103 conP: 0.104 CATH-TRUNC VNG20651 cluster03 -> 1mxa01 7.5468609 142 / 103 conP: 0.273 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met VNG20651 cluster04 -> 1psdA3 6.0415326 82 / 103 conP: 0.268 CATH-ID: 3.30.70.260 D-3-phosphoglycerate dehydrogenase (phosphoglycerate dehydrogenase) VNG20651 cluster09 -> 1dn1B0 8.0013508 222 / 103 conP: 0.199 CATH-ID: 1.20.1050.30 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. --end-- VNG20711 one-of-top-five-correct: 0.270243261677403 CThresh: 3.312884 75 best_is: cluster19 VNG20711 cluster00 -> 1b0zA2 5.0421859 184 / 53 conP: 0.054 CATH-ID: 3.40.50.1890 Phosphoglucose isomerase. Chain: a. Synonym: glucose-6-phosphate isome VNG20711 cluster01 -> 1elkA0 4.8132034 153 / 53 conP: 0.074 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG20711 cluster02 -> 1b0pA3 4.5842208 212 / 53 conP: 0.033 CATH-ID: 3.40.920.10 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG20711 cluster03 -> 1ft1B0 5.2711684 416 / 53 conP: 0.003 CATH-ID: 1.50.10.40 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG20711 cluster04 -> 1pbv01 5.5001509 82 / 53 conP: 0.200 CATH-ID: 1.10.220.20 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: VNG20711 cluster19 -> 1preA1 6.8740461 89 / 53 conP: 0.252 CATH-ID: 3.10.40.10 Proaerolysin. Chain: a, b. Engineered: yes --end-- VNG2074h one-of-top-five-correct: 0.259202271667071 CThresh: 6.903293 29 best_is: cluster10 VNG2074h cluster00 -> 1fseF0 6.0307931 50 / 108 conP: 0.286 CATH-ID: 1.10.10.60 Gere. Chain: a, b, c, d, e, f. Engineered: yes VNG2074h cluster01 -> 1bq7A0 6.0343911 186 / 108 conP: 0.143 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG2074h cluster02 -> 1fchA0 5.9413983 302 / 108 conP: 0.071 CATH-ID: 1.25.40.140 Peroxisomal targeting signal 1 receptor. Chain: a, b. Fragment: c-term VNG2074h cluster03 -> 1nkl00 4.7543427 78 / 108 conP: 0.188 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG2074h cluster04 -> 1fseF0 5.0366217 50 / 108 conP: 0.231 CATH-ID: 1.10.10.60 Gere. Chain: a, b, c, d, e, f. Engineered: yes VNG2074h cluster10 -> 1yrnA0 7.0946598 49 / 108 conP: 0.354 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a --end-- VNG20750 one-of-top-five-correct: 0.461005046455219 CThresh: 3.000461 88 best_is: cluster16 VNG20750 cluster00 -> 1diiA1 7.8634976 231 / 63 conP: 0.114 CATH-ID: 3.40.462.10 P-cresol methylhydroxylase. Chain: a, b. Fragment: flavoprotein subuni VNG20750 cluster01 -> 1ipbA 7.2742744 191 / 63 conP: 0.145 NO-CATH VNG20750 cluster02 -> 1bhmA0 8.3613961 198 / 63 conP: 0.176 CATH-ID: 3.40.91.20 Endonuclease bamhi. Chain: a, b. Synonym: r. Bamhi. Engineered: yes. D VNG20750 cluster03 -> 1e8gA3 8.5012163 231 / 63 conP: 0.134 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, VNG20750 cluster04 -> 1lgr01 8.3613961 336 / 63 conP: 0.044 CATH-ID: 3.90.269.10 Glutamine synthetase complexed with amp VNG20750 cluster16 -> 1b6400 8.7962447 91 / 63 conP: 0.443 CATH-ID: 3.30.70.60 Elongation factor 1-beta. Chain: null. Fragment: guanine exchange fact --end-- VNG20751 one-of-top-five-correct: 0.351976624670963 CThresh: 6.990277 45 best_is: cluster11 VNG20751 cluster00 -> 1vpu00 4.5491506 45 / 121 conP: 0.230 CATH-ID: 1.10.195.10 Vpu protein. Chain: null. Fragment: cytoplasmic domain residues 39 - 8 VNG20751 cluster01 -> 1nkl00 6.5725717 78 / 121 conP: 0.307 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG20751 cluster02 -> 1nkl00 5.5624445 78 / 121 conP: 0.248 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG20751 cluster03 -> 1pii02 4.4259736 191 / 121 conP: 0.110 CATH-ID: 3.20.20.90 N-(5'phosphoribosyl)anthranilate isomerase complex with indole-3-glyce VNG20751 cluster04 -> 1ijwC 4.9329935 47 / 121 conP: 0.248 NO-CATH VNG20751 cluster11 -> 1prcC2 8.0419544 156 / 121 conP: 0.301 CATH-ID: 1.10.468.10 Photosynthetic reaction center --end-- VNG2081h one-of-top-five-correct: 0.288698287570265 CThresh: 4.795461 75 best_is: cluster07 VNG2081h cluster00 -> 1hr6A 6.7554423 457 / 60 conP: 0.004 NO-CATH VNG2081h cluster01 -> 1amuA1 5.5958156 165 / 60 conP: 0.076 CATH-ID: 3.40.50.980 Gramicidin synthetase 1. Chain: a, b. Fragment: adenylate forming doma VNG2081h cluster02 -> 1exnA1 5.4316340 79 / 60 conP: 0.177 CATH-ID: 1.10.150.20 5'-exonuclease. Chain: a, b. Synonym: 5'-nuclease. 5'-3' exonuclease. VNG2081h cluster03 -> 1apq00 5.7291335 53 / 60 conP: 0.241 CATH-ID: 2.10.25.10 Complement protease c1r. Chain: null. Fragment: egf-like module. Engin VNG2081h cluster04 -> 1a8vA1 5.3130975 49 / 60 conP: 0.228 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG2081h cluster07 -> 1bqg01 7.6379812 138 / 60 conP: 0.170 CATH-ID: 3.30.390.10 D-glucarate dehydratase. Chain: null. Engineered: yes. Biological_unit --end-- VNG20841 one-of-top-five-correct: 0.428854303418915 CThresh: 1.973329 100 best_is: cluster02 VNG20841 cluster00 -> 1ihgA 7.1826310 364 / 70 conP: 0.046 CATH-TRUNC VNG20841 cluster01 -> 1f37A0 5.7082128 109 / 70 conP: 0.285 CATH-ID: 3.40.30.10 Ferredoxin [2fe-2s]. Chain: a, b. Engineered: yes VNG20841 cluster02 -> 1ihgA 7.8145245 364 / 70 conP: 0.054 CATH-TRUNC VNG20841 cluster03 -> 1a5t02 5.6954638 40 / 70 conP: 0.442 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG20841 cluster04 -> 1ihgA 5.9188440 364 / 70 conP: 0.032 CATH-TRUNC --end-- VNG20870 one-of-top-five-correct: 0.387179027708959 CThresh: 3.944454 75 best_is: cluster17 VNG20870 cluster00 -> 1b4vA1 6.7613687 332 / 70 conP: 0.036 CATH-ID: 3.50.50.60 Cholesterol oxidase. Chain: null. Biological_unit: monomer. Other_deta VNG20870 cluster01 -> 2cblA3 7.3932622 86 / 70 conP: 0.344 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 VNG20870 cluster02 -> 2cblA3 6.7613687 86 / 70 conP: 0.304 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 VNG20870 cluster03 -> 1erzA 6.3127094 303 / 70 conP: 0.042 CATH-TRUNC VNG20870 cluster04 -> 1qmhA2 7.6927181 91 / 70 conP: 0.352 CATH-ID: 3.30.360.20 RNA 3'-terminal phosphate cyclase. Chain: a, b. Engineered: yes VNG20870 cluster17 -> 2cblA3 8.2357868 86 / 70 conP: 0.400 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 --end-- VNG20881 one-of-top-five-correct: 0.375065774728661 CThresh: 7.607799 25 best_is: cluster17 VNG20881 cluster00 -> 1ofgA1 5.6443991 170 / 125 conP: 0.155 CATH-ID: 3.40.50.720 Glucose-fructose oxidoreductase. Chain: a, b, c, d, e, f. Ec: 1.1.99.2 VNG20881 cluster01 -> 1gweA 5.0635026 498 / 125 conP: 0.024 CATH-TRUNC VNG20881 cluster02 -> 1bob03 4.9739864 54 / 125 conP: 0.224 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG20881 cluster03 -> 1c5a00 4.8143766 65 / 125 conP: 0.206 CATH-ID: 1.20.91.20 Des-arg==74==-complement c5a VNG20881 cluster04 -> 1pea01 4.8879176 192 / 125 conP: 0.115 CATH-ID: 3.40.50.3900 Amidase operon. Chain: null. Fragment: amide receptor/negative regulat VNG20881 cluster17 -> 1jxbA 8.5041807 152 / 125 conP: 0.316 CATH-TRUNC --end-- VNG20911 one-of-top-five-correct: 0.210524964963063 CThresh: 4.226734 75 best_is: cluster16 VNG20911 cluster00 -> 1gln04 4.8899389 48 / 54 conP: 0.214 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG20911 cluster01 -> 1e79A3 4.5451074 131 / 54 conP: 0.077 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG20911 cluster02 -> 1a8vA1 5.1649976 49 / 54 conP: 0.225 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG20911 cluster03 -> 1di1A0 4.7728150 290 / 54 conP: 0.011 CATH-ID: 1.10.615.10 Aristolochene synthase. Chain: a, b. Synonym: sesquiterpene cyclase, a VNG20911 cluster04 -> 1tc3C0 4.8825750 51 / 54 conP: 0.207 CATH-ID: 1.10.10.60 DNA. Chain: a, b. Engineered: yes. Tc3 transposase. Chain: c. Fragment VNG20911 cluster16 -> 1cokA0 6.3667687 68 / 54 conP: 0.243 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi --end-- VNG20960 one-of-top-five-correct: 0.332093057094174 CThresh: 6.191105 75 best_is: cluster01 VNG20960 cluster00 -> 1hfeL3 5.3371897 143 / 83 conP: 0.119 CATH-ID: 3.40.950.10 Fe-only hydrogenase (smaller subunit). Chain: s, t. Other_details: the VNG20960 cluster01 -> 1g1bA 8.3028739 164 / 83 conP: 0.210 CATH-TRUNC VNG20960 cluster02 -> 1e96B0 6.2133439 185 / 83 conP: 0.108 CATH-ID: 1.25.40.10 Ras-related c3 botulinum toxin substrate 1. Chain: a. Synonym: rac1. E VNG20960 cluster03 -> 1ctt02 4.9438360 115 / 83 conP: 0.132 CATH-ID: 3.40.140.10 Cytidine deaminase (cda) complexed with 3,4-dihydrozebularine (dhz) VNG20960 cluster04 -> 2sli02 6.1023505 383 / 83 conP: 0.022 CATH-ID: 2.120.10.10 Intramolecular trans-sialidase. Chain: null. Fragment: devoid of n-ter --end-- VNG2098h one-of-top-five-correct: 0.447581876441482 CThresh: 2.847897 100 best_is: cluster00 VNG2098h cluster00 -> 1bu7A0 8.5788204 455 / 63 conP: 0.013 CATH-ID: 1.10.630.10 Cytochrome p450. Chain: a, b. Fragment: heme domain. Synonym: fatty ac VNG2098h cluster01 -> 1lre00 7.1441183 81 / 63 conP: 0.364 CATH-ID: 1.20.81.10 Receptor-associated protein. Chain: null. Fragment: n-terminal domain, VNG2098h cluster02 -> 1ekvA 8.0041376 365 / 63 conP: 0.030 NO-CATH VNG2098h cluster03 -> 1rypD0 6.4991039 241 / 63 conP: 0.074 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG2098h cluster04 -> 1rypB0 7.2742744 250 / 63 conP: 0.083 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, --end-- VNG2105h one-of-top-five-correct: 0.385875791717616 CThresh: 6.349156 75 best_is: cluster00 VNG2105h cluster00 -> 1ctn02 8.9014314 355 / 88 conP: 0.069 CATH-ID: 3.20.20.80 Chitinase a (ph 5.5, 4 degrees c) VNG2105h cluster01 -> 1i5nA0 6.1216620 124 / 88 conP: 0.173 CATH-ID: 1.20.120.160 Chemotaxis protein chea. Chain: a, b, c, d. Fragment: residues 1-138. VNG2105h cluster02 -> 1a4mA0 8.3118545 349 / 88 conP: 0.062 CATH-ID: 3.20.20.140 Adenosine deaminase. Chain: a, b, c, d. Synonym: ada. Engineered: yes VNG2105h cluster03 -> 1eny00 8.5083801 268 / 88 conP: 0.117 CATH-ID: 3.40.50.720 Enoyl-acyl carrier protein (acp) reductase. Chain: null. Synonym: inha VNG2105h cluster04 -> 1gkxA 8.1621840 308 / 88 conP: 0.080 NO-CATH --end-- VNG21060 one-of-top-five-correct: 0.391376473711216 CThresh: 6.980788 32 best_is: cluster09 VNG21060 cluster00 -> 1oya00 7.1229519 399 / 112 conP: 0.060 CATH-ID: 3.20.20.90 Old yellow enzyme (oxidized) (oye) VNG21060 cluster01 -> 1fgxA0 8.2889636 272 / 112 conP: 0.164 CATH-ID: 3.90.550.20 Beta 1,4 galactosyltransferase. Chain: a, b. Fragment: catalytic domai VNG21060 cluster02 -> 1dubA1 6.7600216 202 / 112 conP: 0.163 CATH-ID: 3.90.226.10 2-enoyl-coa hydratase. Chain: a, b, c, d, e, f. Synonym: crotonase, en VNG21060 cluster03 -> 1gdoA0 5.5371805 238 / 112 conP: 0.099 CATH-ID: 3.60.20.10 Glucosamine 6-phosphate synthase. Chain: a, b, c, d. Fragment: glutami VNG21060 cluster04 -> 1k9sA 7.4129638 237 / 112 conP: 0.159 CATH-TRUNC VNG21060 cluster09 -> 1qd1B2 8.7047728 145 / 112 conP: 0.328 CATH-ID: 3.30.70.670 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot --end-- VNG2109h one-of-top-five-correct: 0.224148929206778 CThresh: 6.267146 75 best_is: cluster02 VNG2109h cluster00 -> 1antI1 5.3468054 146 / 72 conP: 0.090 CATH-ID: 2.30.39.10 Antithrombin VNG2109h cluster01 -> 1atiA1 5.5495386 306 / 72 conP: 0.022 CATH-ID: 3.40.690.10 Glycyl-tRNA synthetase. Chain: a, b. Synonym: glycine-tRNA ligase. Oth VNG2109h cluster02 -> 1b5dA0 7.1015669 246 / 72 conP: 0.059 CATH-ID: 3.30.572.10 Deoxycytidylate hydroxymethylase. Chain: a, b. Synonym: deoxycytidylat VNG2109h cluster03 -> 1aa8A1 5.6396380 198 / 72 conP: 0.061 CATH-ID: 3.40.50.1140 D-amino acid oxidase. Chain: a, b. Engineered: yes VNG2109h cluster04 -> 1fil00 4.9413390 139 / 72 conP: 0.087 CATH-ID: 3.30.450.30 Profilin. Chain: null. Engineered: yes. Other_details: crystallized fr --end-- VNG21101 one-of-top-five-correct: 0.402193141114357 CThresh: 2.893812 100 best_is: cluster12 VNG21101 cluster00 -> 1ad3A1 6.5374922 247 / 65 conP: 0.077 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase (class 3). Chain: a, b. Synonym: aldh. Engineer VNG21101 cluster01 -> 1lehA1 7.6144395 151 / 65 conP: 0.241 CATH-ID: 3.40.192.10 Leucine dehydrogenase. Chain: a, b. Biological_unit: octamer VNG21101 cluster02 -> 1fhvA2 7.8298290 124 / 65 conP: 0.311 CATH-ID: 3.30.390.10 O-succinylbenzoate synthase. Chain: a. Engineered: yes VNG21101 cluster03 -> 1igd00 6.4746386 61 / 65 conP: 0.376 CATH-ID: 3.10.20.10 Protein g VNG21101 cluster04 -> 1lfaA0 5.7803187 183 / 65 conP: 0.117 CATH-ID: 3.40.50.410 Cd11a. Chain: a, b. Domain: i-domain residues 125 - 311. Synonym: lfa- VNG21101 cluster12 -> 1fhvA2 8.0452184 124 / 65 conP: 0.325 CATH-ID: 3.30.390.10 O-succinylbenzoate synthase. Chain: a. Engineered: yes --end-- VNG21102 one-of-top-five-correct: 0.35073109966569 CThresh: 6.774337 75 best_is: cluster01 VNG21102 cluster00 -> 1otcA2 6.7993667 116 / 98 conP: 0.225 CATH-ID: 2.40.50.10 Telomere-binding protein alpha subunit. Chain: a. Synonym: alpha subun VNG21102 cluster01 -> 1l0wA 8.4527814 580 / 98 conP: 0.017 NO-CATH VNG21102 cluster02 -> 1eyzA3 5.2385462 195 / 98 conP: 0.095 CATH-ID: 3.30.470.20 Phosphoribosylglycinamide formyltransferase 2. Chain: a, b. Engineered VNG21102 cluster03 -> 1an802 5.6660866 75 / 98 conP: 0.219 CATH-ID: 2.40.50.110 Streptococcal pyrogenic exotoxin c. Chain: null. Synonym: spE-C. Engin VNG21102 cluster04 -> 1bovA0 5.7434573 69 / 98 conP: 0.231 CATH-ID: 2.40.50.70 Verotoxin-1 (b-oligomer, also called shiga-like toxin-1) --end-- VNG21103 one-of-top-five-correct: 0.207100353750602 CThresh: 5.235659 75 best_is: cluster19 VNG21103 cluster00 -> 1a9xA4 5.5958156 150 / 56 conP: 0.071 CATH-ID: 1.10.1030.10 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG21103 cluster01 -> 1myo00 5.3705710 118 / 56 conP: 0.097 CATH-ID: 1.25.40.20 Myotrophin. Chain: null VNG21103 cluster02 -> 1d8bA0 5.1453265 81 / 56 conP: 0.138 CATH-ID: 1.10.150.80 Sgs1 recq helicase. Chain: a. Fragment: hrdc domain. Engineered: yes VNG21103 cluster03 -> 119l00 6.1366280 162 / 56 conP: 0.072 CATH-ID: 1.10.530.40 Lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, a VNG21103 cluster04 -> 1lbu01 5.5958156 84 / 56 conP: 0.149 CATH-ID: 1.10.101.10 Muramoyl-pentapeptide carboxypeptidase. Chain: null. Ec: 3.4.17.8 VNG21103 cluster19 -> 2dpmA2 6.7220384 103 / 56 conP: 0.160 CATH-ID: 1.10.1020.10 Adenine-specific methyltransferase dpnii 1. Chain: a. Synonym: m.Dpnii --end-- VNG21230 one-of-top-five-correct: 0.540335184818266 CThresh: 6.558498 75 best_is: cluster16 VNG21230 cluster00 -> 1g6wB 8.0659633 242 / 127 conP: 0.244 CATH-TRUNC VNG21230 cluster01 -> 1bucA3 7.7655257 141 / 127 conP: 0.341 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG21230 cluster02 -> 1g6wB 7.4752322 242 / 127 conP: 0.214 CATH-TRUNC VNG21230 cluster03 -> 1qovL1 7.6277025 163 / 127 conP: 0.306 CATH-ID: 1.20.85.10 Photosynthetic reaction center. Chain: l, m, h. Engineered: yes. Mutat VNG21230 cluster04 -> 1hfaA 6.1331553 263 / 127 conP: 0.141 CATH-TRUNC VNG21230 cluster16 -> 1ezfA 9.8230615 323 / 127 conP: 0.255 CATH-TRUNC --end-- VNG21242 one-of-top-five-correct: 0.33076100204001 CThresh: 3.592371 75 best_is: cluster05 VNG21242 cluster00 -> 1ft1B0 6.7715306 416 / 55 conP: 0.005 CATH-ID: 1.50.10.40 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG21242 cluster01 -> 1qqeA0 6.3186065 281 / 55 conP: 0.024 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG21242 cluster02 -> 1aa7A2 6.5450685 78 / 55 conP: 0.260 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG21242 cluster03 -> 1dn1A3 7.2244547 120 / 55 conP: 0.200 CATH-ID: 1.25.40.60 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG21242 cluster04 -> 1kptA0 6.0921444 105 / 55 conP: 0.179 CATH-ID: 3.30.430.10 Kp4 toxin. Chain: a, b. Synonym: p4 toxin, kp4 killer toxin VNG21242 cluster05 -> 1qsaA2 7.7454351 70 / 55 conP: 0.355 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein --end-- VNG21260 one-of-top-five-correct: 0.517749855977416 CThresh: 6.614622 75 best_is: cluster05 VNG21260 cluster00 -> 1lea00 9.8857132 72 / 105 conP: 0.522 CATH-ID: 1.10.10.10 Lexa repressor DNA binding domain (nmr, minimized average structure) VNG21260 cluster01 -> 1qgpA0 9.8242809 76 / 105 conP: 0.510 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d VNG21260 cluster02 -> 1b7yB1 8.5363590 70 / 105 conP: 0.428 CATH-ID: 3.30.56.10 Phenylalanyl-tRNA synthetase. Chain: a. Synonym: phers. Phenylalanyl-t VNG21260 cluster03 -> 1lea00 6.7834405 72 / 105 conP: 0.308 CATH-ID: 1.10.10.10 Lexa repressor DNA binding domain (nmr, minimized average structure) VNG21260 cluster04 -> 1fil00 5.8924623 139 / 105 conP: 0.181 CATH-ID: 3.30.450.30 Profilin. Chain: null. Engineered: yes. Other_details: crystallized fr VNG21260 cluster05 -> 1qgpA0 10.101268 76 / 105 conP: 0.530 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d --end-- VNG21261 one-of-top-five-correct: 0.128838850544062 CThresh: 9.528240 25 best_is: cluster06 VNG21261 cluster00 -> 1kbiA 4.5486625 504 / 126 conP: 0.014 NO-CATH VNG21261 cluster01 -> 1b6u01 4.7944467 98 / 126 conP: 0.123 CATH-ID: 2.60.40.30 P58 killer cell inhibitory receptor. Chain: null. Fragment: extracellu VNG21261 cluster02 -> 1ebaA1 4.4405354 97 / 126 conP: 0.113 CATH-ID: 2.60.40.30 Erythropoietin receptor. Chain: a, b. Fragment: extracellular domain. VNG21261 cluster03 -> 1sbp01 4.1568412 151 / 126 conP: 0.080 CATH-ID: 3.40.190.10 Sulfate-binding protein VNG21261 cluster04 -> 1eqkA0 5.0258812 102 / 126 conP: 0.128 CATH-ID: 3.10.30.10 Oryzacystatin-i. Chain: a. Engineered: yes VNG21261 cluster06 -> 1i6wA0 5.5177940 179 / 126 conP: 0.099 CATH-ID: 3.40.50.950 Lipase a. Chain: a, b. Engineered: yes --end-- VNG21281 one-of-top-five-correct: 0.278909188858622 CThresh: 4.562498 75 best_is: cluster14 VNG21281 cluster00 -> 1ddgA2 6.8011957 105 / 69 conP: 0.237 CATH-ID: 1.20.990.10 Sulfite reductase (NADPH) flavoprotein alpha- component. Chain: a, b. VNG21281 cluster01 -> 1dgnA0 5.3203619 89 / 69 conP: 0.192 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG21281 cluster02 -> 1geo01 5.1189376 166 / 69 conP: 0.093 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG21281 cluster03 -> 1jvr00 5.4313918 137 / 69 conP: 0.131 CATH-ID: 1.10.185.10 Human t-cell leukemia virus type ii matrix protein. Chain: null. Synon VNG21281 cluster04 -> 1eyvA0 5.5319096 131 / 69 conP: 0.142 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr VNG21281 cluster14 -> 2ng101 7.1955437 89 / 69 conP: 0.290 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp --end-- VNG2129h one-of-top-five-correct: 0.152772423005157 CThresh: 1.530680 100 best_is: cluster08 VNG2129h cluster00 -> 1aisB2 3.7453166 94 / 34 conP: 0.078 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG2129h cluster01 -> 1a0p02 4.0063446 180 / 34 conP: 0.015 CATH-ID: 1.10.443.10 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG2129h cluster02 -> 1a3aA0 4.2673726 145 / 34 conP: 0.033 CATH-ID: 3.40.930.10 Mannitol-specific eii. Chain: a, b, c, d. Fragment: iia domain, residu VNG2129h cluster03 -> 1c3rA0 4.0063446 372 / 34 conP: 0.000 CATH-ID: 3.40.800.20 Hdlp (histone deacetylase-like protein). Chain: a, b. Engineered: yes. VNG2129h cluster04 -> 1ae9A0 4.0063446 171 / 34 conP: 0.018 CATH-ID: 1.10.443.10 Lambda integrase. Chain: a, b. Fragment: catalytic domain. Engineered: VNG2129h cluster08 -> 1b22A0 4.5284006 70 / 34 conP: 0.148 CATH-ID: 1.10.150.70 DNA repair protein rad51. Chain: a. Fragment: n-terminal domain. Engin --end-- VNG2133h one-of-top-five-correct: 0.355679285814854 CThresh: 7.757337 25 best_is: cluster01 VNG2133h cluster00 -> 1dl2A0 6.7925342 510 / 129 conP: 0.040 CATH-ID: 1.50.10.50 Class i alpha-1,2-mannosidase. Chain: a. Fragment: catalytic domain. E VNG2133h cluster01 -> 1vin02 8.2519953 113 / 129 conP: 0.351 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG2133h cluster02 -> 1b6a02 6.0269793 79 / 129 conP: 0.255 CATH-ID: 1.10.10.10 Methionine aminopeptidase. Chain: null. Engineered: yes. Other_details VNG2133h cluster03 -> 1bu2A2 6.3824004 102 / 129 conP: 0.251 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG2133h cluster04 -> 1babA0 6.1994526 142 / 129 conP: 0.204 CATH-ID: 1.10.490.10 Hemoglobin thionville alpha chain mutant with val 1 replaced by glu an --end-- VNG21442 one-of-top-five-correct: 0.394433423294399 CThresh: 3.886267 75 best_is: cluster11 VNG21442 cluster00 -> 1a7aA1 6.0935382 234 / 60 conP: 0.050 CATH-ID: 3.40.50.1480 S-adenosylhomocysteine hydrolase. Chain: a, b. Engineered: yes. Biolog VNG21442 cluster01 -> 1hd2A0 8.2998853 161 / 60 conP: 0.189 CATH-ID: 3.40.30.10 Peroxiredoxin 5 residues 54-214. Chain: a. Synonym: prdx5, prxv, aoeb1 VNG21442 cluster02 -> 1mkp00 6.6244357 144 / 60 conP: 0.149 CATH-ID: 3.90.190.10 Pyst1. Chain: null. Fragment: catalytic domain. Synonym: dual specific VNG21442 cluster03 -> 1lbeA1 4.5490952 108 / 60 conP: 0.128 CATH-ID: 1.20.82.10 Adp ribosyl cyclase. Chain: a, b. Synonym: cyclase, nadase. Ec: 3.2.2. VNG21442 cluster04 -> 1bpxA1 6.0935382 83 / 60 conP: 0.234 CATH-ID: 1.10.150.110 DNA polymerase beta. Chain: a. Synonym: pol-beta, beta-pol. Engineered VNG21442 cluster11 -> 1c3uA3 8.5205200 82 / 60 conP: 0.384 CATH-ID: 1.10.164.30 Adenylosuccinate lyase. Chain: a, b. Engineered: yes --end-- VNG2146h one-of-top-five-correct: 0.548428207688472 CThresh: 6.988521 31 best_is: cluster04 VNG2146h cluster00 -> 1d5tA1 5.9528284 105 / 109 conP: 0.214 CATH-ID: 1.10.405.10 Guanine nucleotide dissociation inhibitor. Chain: a. Engineered: yes VNG2146h cluster01 -> 1necA0 5.2848295 216 / 109 conP: 0.099 CATH-ID: 3.40.109.10 Nitroreductase. Chain: a, b, c, d. Engineered: yes VNG2146h cluster02 -> 1pbwA0 5.4794845 184 / 109 conP: 0.125 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG2146h cluster03 -> 1pbwA0 9.0288966 184 / 109 conP: 0.285 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG2146h cluster04 -> 1dkxA2 10.517275 80 / 109 conP: 0.544 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su --end-- VNG21491 one-of-top-five-correct: 0.338127539873992 CThresh: 6.624549 75 best_is: cluster08 VNG21491 cluster00 -> 1aipC3 5.9581160 53 / 101 conP: 0.276 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG21491 cluster01 -> 1eijA0 6.5793224 72 / 101 conP: 0.286 CATH-ID: 1.10.1190.10 Hypothetical protein mth1615. Chain: a. Other_details: homologous to h VNG21491 cluster02 -> 1aipC3 5.5001509 53 / 101 conP: 0.251 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG21491 cluster03 -> 1soxB1 5.0750624 84 / 101 conP: 0.193 CATH-ID: 3.10.120.10 Sulfite oxidase. Chain: a, b. Biological_unit: dimer VNG21491 cluster04 -> 1dv0A0 6.3777306 45 / 101 conP: 0.313 CATH-ID: 1.10.8.10 DNA repair protein hhr23a. Chain: a. Fragment: uba domain (c-terminal VNG21491 cluster08 -> 1d2nA2 8.1637220 67 / 101 conP: 0.396 CATH-ID: 1.10.8.60 N-ethylmaleimide-sensitive fusion protein. Chain: a. Fragment: d2. Eng --end-- VNG21600 one-of-top-five-correct: 0.261908760287775 CThresh: 6.537554 75 best_is: cluster12 VNG21600 cluster00 -> 1d5aA5 6.5944764 54 / 89 conP: 0.289 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG21600 cluster01 -> 1ljwA 6.0673060 141 / 89 conP: 0.150 NO-CATH VNG21600 cluster02 -> 1mroA2 5.3375489 173 / 89 conP: 0.100 CATH-ID: 3.30.70.470 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG21600 cluster03 -> 1mba00 6.7085119 146 / 89 conP: 0.169 CATH-ID: 1.10.490.10 Myoglobin (met) ( p H 7.0) VNG21600 cluster04 -> 1tafA0 6.4168118 68 / 89 conP: 0.257 CATH-ID: 1.10.20.10 Tfiid tbp associated factor 42. Chain: a. Fragment: residues 19 - 86. VNG21600 cluster12 -> 2lisA0 7.3998872 131 / 89 conP: 0.219 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a --end-- VNG2163h one-of-top-five-correct: 0.321605634231771 CThresh: 8.275104 25 best_is: cluster18 VNG2163h cluster00 -> 1ytfD1 6.4160811 53 / 133 conP: 0.290 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG2163h cluster01 -> 1fts01 7.6519329 84 / 133 conP: 0.331 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG2163h cluster02 -> 1ytfD1 6.1870985 53 / 133 conP: 0.276 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG2163h cluster03 -> 1ytfD1 6.6450636 53 / 133 conP: 0.303 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG2163h cluster04 -> 2ng101 6.8169348 89 / 133 conP: 0.275 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG2163h cluster18 -> 1ejkA0 7.9789722 81 / 133 conP: 0.356 CATH-ID: 3.30.910.10 Dini protein. Chain: a. Engineered: yes --end-- VNG2164c one-of-top-five-correct: 0.0372459890132404 CThresh: 3.046068 75 best_is: --end-- VNG2166c one-of-top-five-correct: 0.217827383540546 CThresh: 8.344737 25 best_is: cluster04 VNG2166c cluster00 -> 1kypA 6.3480316 225 / 122 conP: 0.117 NO-CATH VNG2166c cluster01 -> 1bhdA0 4.8651335 108 / 122 conP: 0.145 CATH-ID: 1.10.418.10 Utrophin. Chain: a, b. Fragment: 2nd calponin homology domain from act VNG2166c cluster02 -> 1apyA0 5.4223857 161 / 122 conP: 0.128 CATH-ID: 3.30.426.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG2166c cluster03 -> 1av401 4.6557318 87 / 122 conP: 0.152 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG2166c cluster04 -> 1fftC0 6.8047257 185 / 122 conP: 0.160 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch --end-- VNG21721 one-of-top-five-correct: 0.390941994284964 CThresh: 2.941120 100 best_is: cluster10 VNG21721 cluster00 -> 1qjtA0 6.3045389 99 / 54 conP: 0.220 CATH-ID: 1.10.238.10 Epidermal growth factor receptor substrate substrate 15, eps15. Chain: VNG21721 cluster01 -> 1ddf00 6.5944764 127 / 54 conP: 0.176 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG21721 cluster02 -> 1ig6A0 7.2775994 107 / 54 conP: 0.252 CATH-ID: 1.10.150.60 Modulator recognition factor 2. Chain: a. Fragment: DNA-binding domain VNG21721 cluster03 -> 1juoA 6.0005202 172 / 54 conP: 0.091 NO-CATH VNG21721 cluster04 -> 1b4fA0 7.2775994 74 / 54 conP: 0.340 CATH-ID: 1.10.150.50 Ephb2. Chain: a, b, c, d, e, f, g, h. Fragment: sam domain. Engineered VNG21721 cluster10 -> 1c07A0 8.1884300 95 / 54 conP: 0.338 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm --end-- VNG21730 one-of-top-five-correct: 0.466080839892154 CThresh: 4.508595 75 best_is: cluster11 VNG21730 cluster00 -> 1dekA2 5.7879900 121 / 84 conP: 0.216 CATH-ID: 1.10.238.70 Deoxynucleoside monophosphate kinase. Chain: a, b. Engineered: yes VNG21730 cluster01 -> 1ytfB0 6.0814600 46 / 84 conP: 0.359 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG21730 cluster02 -> 1brwA2 6.2709937 272 / 84 conP: 0.082 CATH-ID: 3.40.1030.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 VNG21730 cluster03 -> 1cipA2 6.2709937 119 / 84 conP: 0.243 CATH-ID: 1.10.400.10 Guanine nucleotide-binding protein alpha-1 subunit. Chain: a. Synonym: VNG21730 cluster04 -> 1bvsA3 5.3779843 44 / 84 conP: 0.317 CATH-ID: 1.10.8.10 Ruva. Chain: a, b, c, d, e, f, g, h. Engineered: yes. Biological_unit: VNG21730 cluster11 -> 1fafA0 9.0578996 79 / 84 conP: 0.501 CATH-ID: 1.20.15.80 Large t antigen. Chain: a. Fragment: n-terminal domain. Engineered: ye --end-- VNG2174h one-of-top-five-correct: 0.211346775423637 CThresh: 3.619795 75 best_is: cluster03 VNG2174h cluster00 -> 1b7eA2 5.3151396 126 / 47 conP: 0.087 CATH-ID: 1.10.740.10 Transposase inhibitor protein from tn5. Chain: a. Engineered: yes VNG2174h cluster01 -> 1b7eA2 5.0778183 126 / 47 conP: 0.082 CATH-ID: 1.10.740.10 Transposase inhibitor protein from tn5. Chain: a. Engineered: yes VNG2174h cluster02 -> 1bpb01 4.8663321 58 / 47 conP: 0.188 CATH-ID: 1.10.150.20 DNA polymerase beta (beta polymerase) (apo, 31kd domain) VNG2174h cluster03 -> 1qgpA0 6.2644251 76 / 47 conP: 0.210 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d VNG2174h cluster04 -> 1pda03 3.8912115 87 / 47 conP: 0.102 CATH-ID: 3.30.160.40 Porphobilinogen deaminase --end-- VNG21752 one-of-top-five-correct: 0.492906746947431 CThresh: 2.161718 100 best_is: cluster02 VNG21752 cluster00 -> 2pgd02 7.7430956 255 / 64 conP: 0.108 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase (6-pgdh) VNG21752 cluster01 -> 1ddbA0 7.2285129 195 / 64 conP: 0.167 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG21752 cluster02 -> 1gxpA 8.7432908 103 / 64 conP: 0.459 NO-CATH VNG21752 cluster03 -> 1qqiA0 7.9571227 104 / 64 conP: 0.401 CATH-ID: 1.10.10.10 Phosphate regulon transcriptional regulatory protein phob. Chain: a. F VNG21752 cluster04 -> 2pgd02 7.9571227 255 / 64 conP: 0.114 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase (6-pgdh) --end-- VNG2177h one-of-top-five-correct: 0.303782677070734 CThresh: 8.380251 25 best_is: cluster09 VNG2177h cluster00 -> 1qc7A0 6.1071737 101 / 124 conP: 0.204 CATH-ID: 1.10.220.30 Flig. Chain: a, b. Fragment: flig-c. Engineered: yes VNG2177h cluster01 -> 1r2fA0 6.1882328 283 / 124 conP: 0.086 CATH-ID: 1.10.620.20 Ribonucleotide reductase r2. Chain: a, b. Engineered: yes VNG2177h cluster02 -> 1d1dA1 4.9395167 140 / 124 conP: 0.128 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG2177h cluster03 -> 1j7rA0 6.0924333 77 / 124 conP: 0.226 CATH-ID: 1.10.238.10 Calcium vector protein. Chain: a. Fragment: n-terminal domain (residue VNG2177h cluster04 -> 1ala01 6.4381822 73 / 124 conP: 0.248 CATH-ID: 1.10.220.10 Annexin v VNG2177h cluster09 -> 1tmkA0 8.0045197 204 / 124 conP: 0.198 CATH-ID: 3.40.50.300 Thymidylate kinase. Chain: a, b. Engineered: yes. Biological_unit: dim --end-- VNG2178h one-of-top-five-correct: 0.376805355481494 CThresh: 6.525624 75 best_is: cluster17 VNG2178h cluster00 -> 1fc3A0 6.6719242 119 / 91 conP: 0.206 CATH-ID: 1.10.10.60 Spo0a. Chain: a, b, c. Fragment: c-terminal domain. Synonym: sporulati VNG2178h cluster01 -> 1qqnA4 6.3021013 84 / 91 conP: 0.234 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG2178h cluster02 -> 1lddA 5.6849633 74 / 91 conP: 0.216 NO-CATH VNG2178h cluster03 -> 1bob03 7.5053070 54 / 91 conP: 0.352 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG2178h cluster04 -> 1bob03 7.7330147 54 / 91 conP: 0.367 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG2178h cluster17 -> 1qqnA4 8.8078952 84 / 91 conP: 0.386 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra --end-- VNG21814 one-of-top-five-correct: 0.550283722064937 CThresh: 2.607704 100 best_is: cluster00 VNG21814 cluster00 -> 1ecl02 9.5529446 166 / 65 conP: 0.335 CATH-ID: 1.10.460.10 Escherichia coli topoisomerase i. Domain: amino-terminal 67kda. Synony VNG21814 cluster01 -> 1mpgA3 7.3877451 52 / 65 conP: 0.480 CATH-ID: 1.10.15.10 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine VNG21814 cluster02 -> 1mpgA3 6.6968813 52 / 65 conP: 0.430 CATH-ID: 1.10.15.10 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine VNG21814 cluster03 -> 1ecl02 8.6913868 166 / 65 conP: 0.282 CATH-ID: 1.10.460.10 Escherichia coli topoisomerase i. Domain: amino-terminal 67kda. Synony VNG21814 cluster04 -> 1mpgA3 6.2363054 52 / 65 conP: 0.398 CATH-ID: 1.10.15.10 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine --end-- VNG2182h one-of-top-five-correct: 0.317255186176414 CThresh: 7.346412 25 best_is: cluster10 VNG2182h cluster00 -> 1dubA2 6.8652390 58 / 111 conP: 0.311 CATH-ID: 1.10.12.10 2-enoyl-coa hydratase. Chain: a, b, c, d, e, f. Synonym: crotonase, en VNG2182h cluster01 -> 1hplA1 5.5677781 337 / 111 conP: 0.051 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) VNG2182h cluster02 -> 3pmgA1 6.6701065 197 / 111 conP: 0.151 CATH-ID: 3.40.460.10 Alpha-d-glucose-1,6-bisphosphate. Chain: a, b. Synonym: phosphoglucomu VNG2182h cluster03 -> 1bq7A0 6.3039066 186 / 111 conP: 0.146 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG2182h cluster04 -> 1dubA2 6.8652390 58 / 111 conP: 0.311 CATH-ID: 1.10.12.10 2-enoyl-coa hydratase. Chain: a, b, c, d, e, f. Synonym: crotonase, en VNG2182h cluster10 -> 1ad600 8.0039654 185 / 111 conP: 0.220 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi --end-- VNG2187h one-of-top-five-correct: 0.326270549517223 CThresh: 5.037264 75 best_is: cluster06 VNG2187h cluster00 -> 1qqeA0 7.4436950 281 / 71 conP: 0.058 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG2187h cluster01 -> 1dosA0 6.7222690 358 / 71 conP: 0.023 CATH-ID: 3.20.20.170 Aldolase class ii. Chain: a, b. Engineered: yes VNG2187h cluster02 -> 1guxB0 7.3514623 141 / 71 conP: 0.193 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG2187h cluster03 -> 5reqB 7.3514623 619 / 71 conP: 0.002 NO-CATH VNG2187h cluster04 -> 1elkA0 5.4638823 153 / 71 conP: 0.110 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG2187h cluster06 -> 1colA0 7.9806556 197 / 71 conP: 0.142 CATH-ID: 1.10.490.30 Colicin A (c-terminal domain) (pore-forming domain) --end-- VNG2189h one-of-top-five-correct: 0.515091443465976 CThresh: 4.377840 75 best_is: cluster00 VNG2189h cluster00 -> 1jud02 9.7408342 75 / 75 conP: 0.531 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG2189h cluster01 -> 1bu2A2 9.1411678 102 / 75 conP: 0.426 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG2189h cluster02 -> 1ahjB1 6.5600769 110 / 75 conP: 0.246 CATH-ID: 1.10.472.20 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het VNG2189h cluster03 -> 2hmqA0 6.7789856 113 / 75 conP: 0.253 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG2189h cluster04 -> 1e5rA 9.2735757 260 / 75 conP: 0.150 NO-CATH --end-- VNG21931 one-of-top-five-correct: 0.203283647777225 CThresh: 4.029166 75 best_is: cluster00 VNG21931 cluster00 -> 1cuk03 5.9741910 48 / 62 conP: 0.307 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes VNG21931 cluster01 -> 1uaaA4 4.9177782 162 / 62 conP: 0.083 CATH-ID: 1.10.486.10 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG21931 cluster02 -> 1uxy03 5.1327096 150 / 62 conP: 0.099 CATH-ID: 3.30.465.10 Uridine diphospho-n-acetylenolpyruvylglucosamine reductase. Chain: nul VNG21931 cluster03 -> 1uaaA4 5.7916687 162 / 62 conP: 0.104 CATH-ID: 1.10.486.10 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG21931 cluster04 -> 1jkw01 5.7916687 176 / 62 conP: 0.090 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y --end-- VNG21961 one-of-top-five-correct: 0.269535096853731 CThresh: 6.605725 75 best_is: cluster00 VNG21961 cluster00 -> 1ft1A0 7.8338263 315 / 76 conP: 0.042 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG21961 cluster01 -> 1hbnC0 4.6877690 247 / 76 conP: 0.032 CATH-ID: 3.90.320.20 Methyl-coenzyme m reductase i alpha subunit. Chain: a, d. Methyl-coenz VNG21961 cluster02 -> 2tpt01 4.7492903 107 / 76 conP: 0.110 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG21961 cluster03 -> 1c9bA2 5.8262722 106 / 76 conP: 0.145 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG21961 cluster04 -> 1mpgA3 4.5999242 52 / 76 conP: 0.164 CATH-ID: 1.10.15.10 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine --end-- VNG2197h one-of-top-five-correct: 0.367929576381027 CThresh: 3.632204 75 best_is: cluster12 VNG2197h cluster00 -> 1fadA0 6.8840319 95 / 62 conP: 0.271 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG2197h cluster01 -> 1ec5A0 6.2100330 48 / 62 conP: 0.342 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG2197h cluster02 -> 1a0p01 5.7916687 91 / 62 conP: 0.221 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG2197h cluster03 -> 1trkA1 6.3240585 329 / 62 conP: 0.022 CATH-ID: 3.40.50.970 Transketolase VNG2197h cluster04 -> 1c07A0 6.8840319 95 / 62 conP: 0.271 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm VNG2197h cluster12 -> 1ihgA 8.0520704 364 / 62 conP: 0.024 NO-CATH --end-- VNG22011 one-of-top-five-correct: 0.470824138560204 CThresh: 5.675304 75 best_is: cluster07 VNG22011 cluster00 -> 1a1w00 8.3745916 83 / 85 conP: 0.383 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG22011 cluster01 -> 1dgnA0 8.5473862 89 / 85 conP: 0.383 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG22011 cluster02 -> 1qlaC0 7.0344997 254 / 85 conP: 0.094 CATH-ID: 1.20.950.10 Fumarate reductase flavoprotein subunit. Chain: a, d. Other_details: 8 VNG22011 cluster03 -> 1lxl00 8.5174686 221 / 85 conP: 0.172 CATH-ID: 1.10.437.10 Bcl-xl. Chain: null. Synonym: apoptosis regulator bcl-x. Engineered: y VNG22011 cluster04 -> 1qdbA 8.4247495 473 / 85 conP: 0.025 CATH-TRUNC VNG22011 cluster07 -> 1fewA0 9.6163922 173 / 85 conP: 0.297 CATH-ID: 1.20.1040.20 Second mitochondria-derived activator of caspases. Chain: a. Fragment: --end-- VNG22013 one-of-top-five-correct: 0.287089353793472 CThresh: 6.684941 75 best_is: cluster07 VNG22013 cluster00 -> 1dkuA1 4.8210388 128 / 80 conP: 0.100 CATH-ID: 3.40.50.90 Phosphoribosyl pyrophosphate synthetase. Chain: a, b. Synonym: ribose- VNG22013 cluster01 -> 1ddvA0 5.6396380 104 / 80 conP: 0.148 CATH-ID: 2.30.29.30 Glgf-domain protein homer. Chain: a. Fragment: homer evh1 residues 1-1 VNG22013 cluster02 -> 1yrgA0 4.5789998 343 / 80 conP: 0.015 CATH-ID: 3.80.10.10 Gtpase-activating protein rna1_schpo. Chain: a, b. Synonym: rna1p. Ran VNG22013 cluster03 -> 1e5kA0 3.8998633 188 / 80 conP: 0.048 CATH-ID: 3.90.550.30 Molybdopterin-guanine dinucleotide biosynthesis protein a. Chain: a. S VNG22013 cluster04 -> 1g4mA 5.0197936 356 / 80 conP: 0.016 CATH-TRUNC VNG22013 cluster07 -> 1fsz02 8.0179876 107 / 80 conP: 0.251 CATH-ID: 3.30.70.450 Ftsz. Chain: null. Synonym: sulb. Engineered: yes --end-- VNG2202h one-of-top-five-correct: 0.550349889774173 CThresh: 6.940249 31 best_is: cluster09 VNG2202h cluster00 -> 1fftC0 7.7547971 185 / 105 conP: 0.205 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG2202h cluster01 -> 2cblA1 9.4056514 129 / 105 conP: 0.376 CATH-ID: 1.20.930.20 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 VNG2202h cluster02 -> 1afrA0 8.3134976 345 / 105 conP: 0.094 CATH-ID: 1.10.620.20 Delta9 stearoyl-acyl carrier protein desaturase. Chain: a, b, c, d, e, VNG2202h cluster03 -> 1d5aA5 7.2775994 54 / 105 conP: 0.350 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG2202h cluster04 -> 1ku3A 4.9536884 61 / 105 conP: 0.208 NO-CATH VNG2202h cluster09 -> 1aj300 10.607715 98 / 105 conP: 0.512 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: null. Fragment: 16th repeat, residues 1772 - 18 --end-- VNG22082 one-of-top-five-correct: 0.370983683038209 CThresh: 6.114396 75 best_is: cluster03 VNG22082 cluster00 -> 1ithA0 5.8514337 141 / 114 conP: 0.216 CATH-ID: 1.10.490.10 Hemoglobin (cyanomet) VNG22082 cluster01 -> 1fz1F2 7.3384403 73 / 114 conP: 0.391 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: VNG22082 cluster02 -> 1rlr03 6.3761965 299 / 114 conP: 0.108 CATH-ID: 3.90.244.10 Ribonucleotide reductase protein r1. Chain: null. Synonym: ribonucleos VNG22082 cluster03 -> 1fz1F2 8.0295995 73 / 114 conP: 0.440 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: VNG22082 cluster04 -> 1g6uA0 6.4458751 48 / 114 conP: 0.367 CATH-ID: 1.20.15.270 Domain swapped dimer. Chain: a, b. Engineered: yes --end-- VNG22133 one-of-top-five-correct: 0.429406448159492 CThresh: 4.590398 75 best_is: cluster00 VNG22133 cluster00 -> 1apa01 8.7570883 177 / 81 conP: 0.270 CATH-ID: 3.40.420.10 Pokeweed antiviral protein (alpha) VNG22133 cluster01 -> 1i72A 6.8741558 251 / 81 conP: 0.102 CATH-TRUNC VNG22133 cluster02 -> 1apa01 8.2727274 177 / 81 conP: 0.243 CATH-ID: 3.40.420.10 Pokeweed antiviral protein (alpha) VNG22133 cluster03 -> 1apa01 6.3667079 177 / 81 conP: 0.157 CATH-ID: 3.40.420.10 Pokeweed antiviral protein (alpha) VNG22133 cluster04 -> 1mpgA1 5.3902045 112 / 81 conP: 0.197 CATH-ID: 3.30.310.20 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine --end-- VNG22140 one-of-top-five-correct: 0.644649170992961 CThresh: 9.034065 25 best_is: cluster13 VNG22140 cluster00 -> 1joyA0 8.8040188 67 / 161 conP: 0.450 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG22140 cluster01 -> 1fioA0 9.1393334 190 / 161 conP: 0.345 CATH-ID: 1.20.1050.30 Sso1 protein. Chain: a. Fragment: cytoplasmic domain. Engineered: yes. VNG22140 cluster02 -> 1fioA0 11.320784 190 / 161 conP: 0.497 CATH-ID: 1.20.1050.30 Sso1 protein. Chain: a. Fragment: cytoplasmic domain. Engineered: yes. VNG22140 cluster03 -> 1grj01 7.8518573 74 / 161 conP: 0.376 CATH-ID: 1.20.15.150 Grea transcript cleavage factor from escherichia coli VNG22140 cluster04 -> 1mroA3 6.8731002 227 / 161 conP: 0.189 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG22140 cluster13 -> 1cxzB0 11.359415 86 / 161 conP: 0.611 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid --end-- VNG22141 one-of-top-five-correct: 0.740599299579813 CThresh: 7.849826 25 best_is: cluster12 VNG22141 cluster00 -> 1joyA0 8.8040188 67 / 165 conP: 0.525 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG22141 cluster01 -> 1b3qA1 8.4133403 62 / 165 conP: 0.502 CATH-ID: 1.20.15.220 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG22141 cluster02 -> 14psA0 8.9444133 226 / 165 conP: 0.369 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG22141 cluster03 -> 1a36A5 10.443119 72 / 165 conP: 0.634 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG22141 cluster04 -> 1grj01 8.5106518 74 / 165 conP: 0.496 CATH-ID: 1.20.15.150 Grea transcript cleavage factor from escherichia coli VNG22141 cluster12 -> 1jqcA0 11.972712 340 / 165 conP: 0.464 CATH-ID: 1.10.620.20 Protein r2 of ribonucleotide reductase. Chain: a, b. Synonym: ribonucl --end-- VNG22161 one-of-top-five-correct: 0.275360840377951 CThresh: 4.474678 75 best_is: cluster12 VNG22161 cluster00 -> 1phk01 5.7315548 91 / 76 conP: 0.234 CATH-ID: 3.30.200.20 Phosphorylase kinase. Chain: null. Fragment: gamma subunit, truncated VNG22161 cluster01 -> 1b7eA2 5.5407105 126 / 76 conP: 0.174 CATH-ID: 1.10.740.10 Transposase inhibitor protein from tn5. Chain: a. Engineered: yes VNG22161 cluster02 -> 1qgxA1 6.7423738 219 / 76 conP: 0.112 CATH-ID: 3.30.540.10 3',5'-adenosine bisphosphatase. Chain: a. Synonym: pap phosphatase. En VNG22161 cluster03 -> 1b25A2 5.5096109 178 / 76 conP: 0.114 CATH-ID: 1.10.569.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG22161 cluster04 -> 1hlrA 5.6227010 907 / 76 conP: 0.000 CATH-TRUNC VNG22161 cluster12 -> 1bgeA0 6.9478343 159 / 76 conP: 0.189 CATH-ID: 1.20.120.200 Granulocyte colony-stimulating factor (form ii rcg-csfii) --end-- VNG22192 one-of-top-five-correct: 0.211412697397694 CThresh: 5.674317 75 best_is: cluster19 VNG22192 cluster00 -> 1ebdC0 5.8833077 41 / 76 conP: 0.279 CATH-ID: 4.10.320.10 Dihydrolipoamide dehydrogenase. Chain: a, b. Synonym: e3bd. Engineered VNG22192 cluster01 -> 1bq7A0 5.2155585 186 / 76 conP: 0.077 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG22192 cluster02 -> 1ebdC0 5.1419977 41 / 76 conP: 0.238 CATH-ID: 4.10.320.10 Dihydrolipoamide dehydrogenase. Chain: a, b. Synonym: e3bd. Engineered VNG22192 cluster03 -> 1ebdC0 5.6362044 41 / 76 conP: 0.265 CATH-ID: 4.10.320.10 Dihydrolipoamide dehydrogenase. Chain: a, b. Synonym: e3bd. Engineered VNG22192 cluster04 -> 1in4A 6.3314528 298 / 76 conP: 0.040 CATH-TRUNC VNG22192 cluster19 -> 1hlrA 6.5369133 907 / 76 conP: 0.000 --end-- VNG22231 one-of-top-five-correct: 0.281115621035491 CThresh: 4.578292 75 best_is: cluster07 VNG22231 cluster00 -> 1gln04 6.4458751 48 / 82 conP: 0.370 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG22231 cluster01 -> 1gln04 6.6817172 48 / 82 conP: 0.386 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG22231 cluster02 -> 1bu2A1 6.7358675 112 / 82 conP: 0.270 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG22231 cluster03 -> 1bolA0 5.1295911 222 / 82 conP: 0.083 CATH-ID: 3.90.730.10 Ribonuclease rh. Chain: a. Ec: 3.1.27.1 VNG22231 cluster04 -> 1h97A0 5.4475206 147 / 82 conP: 0.159 CATH-ID: 1.10.490.10 Globin-3. Chain: a, b. Engineered: yes. Synonym: myoglobin, hemoglobin VNG22231 cluster07 -> 1ash00 6.9366521 147 / 82 conP: 0.225 CATH-ID: 1.10.490.10 Hemoglobin (domain one) --end-- VNG22240 one-of-top-five-correct: 0.22594255702171 CThresh: 5.273508 75 best_is: cluster01 VNG22240 cluster00 -> 1b0pA3 5.1659743 212 / 61 conP: 0.038 CATH-ID: 3.40.920.10 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG22240 cluster01 -> 1fbxA2 6.9295708 136 / 61 conP: 0.137 CATH-ID: 3.50.11.20 Gtp cyclohydrolase i. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG22240 cluster02 -> 1de4C1 4.5146035 307 / 61 conP: 0.011 CATH-ID: 3.40.630.10 Hemochromatosis protein. Chain: a, d, g. Fragment: ectodomain. Synonym VNG22240 cluster03 -> 1kmjA 5.0647088 404 / 61 conP: 0.004 CATH-TRUNC VNG22240 cluster04 -> 1f3cA0 6.2709434 89 / 61 conP: 0.183 CATH-ID: 3.30.740.10 Dynein. Chain: a, b. Fragment: 8kda light chain. Synonym: protein inhi --end-- VNG22331 one-of-top-five-correct: 0.397591624176384 CThresh: 4.783148 75 best_is: cluster06 VNG22331 cluster00 -> 1ngr00 6.8557543 85 / 67 conP: 0.261 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d VNG22331 cluster01 -> 1dlwA0 6.6696961 116 / 67 conP: 0.195 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a. Engineered: yes VNG22331 cluster02 -> 1aua02 6.2417257 83 / 67 conP: 0.232 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG22331 cluster03 -> 1fnnA3 5.7092767 104 / 67 conP: 0.172 CATH-ID: 1.10.10.10 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG22331 cluster04 -> 1a7j00 6.6696961 279 / 67 conP: 0.042 CATH-ID: 3.40.50.300 Phosphoribulokinase. Chain: null. Engineered: yes. Biological_unit: oc VNG22331 cluster06 -> 1eyvA0 8.8040188 131 / 67 conP: 0.277 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr --end-- VNG2236h one-of-top-five-correct: 0.232203425740432 CThresh: 2.665886 100 best_is: cluster12 VNG2236h cluster00 -> 1qb2A0 4.7167501 106 / 43 conP: 0.102 CATH-ID: 1.10.260.30 Human signal recognition particle 54 kd protein. Chain: a, b. Fragment VNG2236h cluster01 -> 1apyB0 5.5229456 141 / 43 conP: 0.075 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa VNG2236h cluster02 -> 1e8cA 6.0102569 482 / 43 conP: 0.000 NO-CATH VNG2236h cluster03 -> 1cb8A1 6.0102569 312 / 43 conP: 0.006 CATH-ID: 1.50.40.10 Chondroitinase ac. Chain: a. Ec: 4.2.2.5 VNG2236h cluster04 -> 1dj0A1 5.2792900 138 / 43 conP: 0.073 CATH-ID: 3.30.70.660 Pseudouridine synthase i. Chain: a, b. Engineered: yes VNG2236h cluster12 -> 1apyB0 6.2539125 141 / 43 conP: 0.091 CATH-ID: 3.50.11.10 Aspartylglucosaminidase. Chain: a, b, c, d. Synonym: aga, glycosylaspa --end-- VNG22391 one-of-top-five-correct: 0.619207272996165 CThresh: 5.126070 75 best_is: cluster12 VNG22391 cluster00 -> 2bnh00 8.2059287 456 / 103 conP: 0.063 CATH-ID: 3.80.10.10 Ribonuclease inhibitor. Chain: null. Synonym: rnase inhibitor, ribonuc VNG22391 cluster01 -> 1pfkA2 8.2911154 126 / 103 conP: 0.395 CATH-ID: 3.40.50.460 Phosphofructokinase (r-state) complex with fructose-1,6-bisphosphate a VNG22391 cluster02 -> 1b5400 6.1280559 230 / 103 conP: 0.147 CATH-ID: 3.20.20.10 Yeast hypothetical protein. Chain: null. Engineered: yes. Biological_u VNG22391 cluster03 -> 1k92A 6.5427840 444 / 103 conP: 0.043 NO-CATH VNG22391 cluster04 -> 1a4iA2 6.2846663 89 / 103 conP: 0.320 CATH-ID: 3.40.50.2050 Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyc VNG22391 cluster12 -> 1rkd02 10.608249 256 / 103 conP: 0.345 CATH-ID: 3.90.77.20 Ribokinase. Chain: null. Engineered: yes. Biological_unit: homodimer --end-- VNG2241h one-of-top-five-correct: 0.404788662215847 CThresh: 7.332219 25 best_is: cluster12 VNG2241h cluster00 -> 1hwxA1 7.4448570 51 / 115 conP: 0.368 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG2241h cluster01 -> 1k94A 6.3944388 165 / 115 conP: 0.177 NO-CATH VNG2241h cluster02 -> 1f6fA0 7.1170528 183 / 115 conP: 0.192 CATH-ID: 1.20.120.200 Placental lactogen. Chain: a. Engineered: yes. Prolactin receptor. Cha VNG2241h cluster03 -> 1yrnA0 5.3749323 49 / 115 conP: 0.245 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG2241h cluster04 -> 1hbg00 7.1170528 147 / 115 conP: 0.228 CATH-ID: 1.10.490.10 Hemoglobin (carbon monoxy) VNG2241h cluster12 -> 1eu8A1 8.9490839 190 / 115 conP: 0.278 CATH-ID: 3.40.190.10 Trehalose/maltose binding protein. Chain: a. Engineered: yes --end-- VNG2244h one-of-top-five-correct: 0.349032181915319 CThresh: 8.800530 25 best_is: cluster17 VNG2244h cluster00 -> 1hqkA 6.3876534 154 / 120 conP: 0.150 NO-CATH VNG2244h cluster01 -> 1pjr02 7.6107133 72 / 120 conP: 0.289 CATH-ID: 1.10.10.160 Pcra. Chain: null. Engineered: yes VNG2244h cluster02 -> 1aa7A1 6.1392846 79 / 120 conP: 0.203 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG2244h cluster03 -> 1aisB1 6.4095643 99 / 120 conP: 0.197 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG2244h cluster04 -> 1ytfD1 6.7936845 53 / 120 conP: 0.264 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG2244h cluster17 -> 1b3qA1 8.8502856 62 / 120 conP: 0.381 CATH-ID: 1.20.15.220 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k --end-- VNG2246h one-of-top-five-correct: 0.354029743807186 CThresh: 8.058776 25 best_is: cluster01 VNG2246h cluster00 -> 1ez3A0 8.2835669 124 / 128 conP: 0.322 CATH-ID: 1.20.1040.20 Syntaxin-1a. Chain: a, b, c. Fragment: n-terminal domain. Synonym: syn VNG2246h cluster01 -> 1jgjA0 8.3917463 217 / 128 conP: 0.228 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG2246h cluster02 -> 1ytfB0 6.7979811 46 / 128 conP: 0.322 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG2246h cluster03 -> 1cbzA1 7.8658819 315 / 128 conP: 0.129 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG2246h cluster04 -> 1vin02 7.9534894 113 / 128 conP: 0.315 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG22471 one-of-top-five-correct: 0.371294997292201 CThresh: 1.653795 100 best_is: cluster12 VNG22471 cluster00 -> 1ap800 6.2867313 213 / 51 conP: 0.066 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes VNG22471 cluster01 -> 1fehA5 7.2132319 211 / 51 conP: 0.087 CATH-ID: 3.40.950.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG22471 cluster02 -> 1fehA5 7.2132319 211 / 51 conP: 0.087 CATH-ID: 3.40.950.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG22471 cluster03 -> 1vdeA3 6.5942679 109 / 51 conP: 0.245 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes VNG22471 cluster04 -> 1ap800 7.2132319 213 / 51 conP: 0.085 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes VNG22471 cluster12 -> 1ap800 7.4448570 213 / 51 conP: 0.090 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes --end-- VNG2253h one-of-top-five-correct: 0.538138375332034 CThresh: 3.778087 75 best_is: cluster16 VNG2253h cluster00 -> 1mroA3 7.5684895 227 / 66 conP: 0.106 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG2253h cluster01 -> 1gai00 9.0692998 472 / 66 conP: 0.013 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc VNG2253h cluster02 -> 1mroA3 7.7828909 227 / 66 conP: 0.112 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG2253h cluster03 -> 1gai00 9.2837013 472 / 66 conP: 0.014 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc VNG2253h cluster04 -> 1fjgT0 7.5684895 99 / 66 conP: 0.315 CATH-TRUNC VNG2253h cluster16 -> 1qgkA 9.9269057 876 / 66 conP: 0.000 NO-CATH --end-- VNG2262h one-of-top-five-correct: 0.210302812447038 CThresh: 10.663022 25 best_is: cluster16 VNG2262h cluster00 -> 1kdxA0 5.1316651 81 / 138 conP: 0.129 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG2262h cluster01 -> 1hbg00 4.7137176 147 / 138 conP: 0.086 CATH-ID: 1.10.490.10 Hemoglobin (carbon monoxy) VNG2262h cluster02 -> 1kzuB0 4.8948944 41 / 138 conP: 0.145 CATH-ID: 1.20.5.250 Light harvesting protein b-800/850. Chain: a, b, d, e, g, h. Synonym: VNG2262h cluster03 -> 1rgp00 4.8815517 189 / 138 conP: 0.074 CATH-ID: 1.10.555.10 Rhogap. Chain: null. Fragment: gtpase activation domain. Synonym: cdc4 VNG2262h cluster04 -> 1d8bA0 4.5529105 81 / 138 conP: 0.112 CATH-ID: 1.10.150.80 Sgs1 recq helicase. Chain: a. Fragment: hrdc domain. Engineered: yes VNG2262h cluster16 -> 1iow01 7.3693185 84 / 138 conP: 0.218 CATH-ID: 3.40.50.20 D-ala\:d-ala ligase. Chain: null. Synonym: dd-ligase, ddlb. Engineered --end-- VNG22631 one-of-top-five-correct: 0.477887618769313 CThresh: 2.247548 100 best_is: cluster05 VNG22631 cluster00 -> 1qmuA2 6.2709434 79 / 61 conP: 0.333 CATH-ID: 2.60.40.1120 Carboxypeptidase gp180 residues 503-882. Chain: a. Fragment: yes. Engi VNG22631 cluster01 -> 1sro00 5.8318584 76 / 61 conP: 0.313 CATH-ID: 2.40.50.10 Pnpase. Chain: null. Fragment: s1 RNA binding domain. Synonym: polyrib VNG22631 cluster02 -> 1d7qA0 6.5818281 143 / 61 conP: 0.207 CATH-ID: 2.40.50.10 N-terminal histidine tag. Chain: b. Engineered: yes. Translation initi VNG22631 cluster03 -> 1tiiD0 6.4904859 98 / 61 conP: 0.299 CATH-ID: 2.40.50.50 Heat labile enterotoxin type iib. Chain: d, e, f, g, h, a, c. Synonym: VNG22631 cluster04 -> 1bovA0 6.2383724 69 / 61 conP: 0.357 CATH-ID: 2.40.50.70 Verotoxin-1 (b-oligomer, also called shiga-like toxin-1) VNG22631 cluster05 -> 1quqA0 8.6859108 121 / 61 conP: 0.382 CATH-ID: 2.40.50.10 Replication protein a 32 kd subunit. Chain: a, c. Fragment: central do --end-- VNG22671 one-of-top-five-correct: 0.391872625374964 CThresh: 7.168760 25 best_is: cluster05 VNG22671 cluster00 -> 1aep00 7.1874142 153 / 127 conP: 0.263 CATH-ID: 1.20.120.20 Apolipophorin iii VNG22671 cluster01 -> 1grj01 6.1948600 74 / 127 conP: 0.293 CATH-ID: 1.20.15.150 Grea transcript cleavage factor from escherichia coli VNG22671 cluster02 -> 1om2A0 6.0707291 95 / 127 conP: 0.263 CATH-ID: 1.20.960.10 Mitochondrial import receptor subunit tom20. Chain: a. Fragment: resid VNG22671 cluster03 -> 1e52A0 5.1453265 56 / 127 conP: 0.253 CATH-ID: 4.10.860.10 Excinuclease abc subunit . Chain: a, b. Fragment: c-terminal domain re VNG22671 cluster04 -> 1qsdA0 6.8065700 102 / 127 conP: 0.298 CATH-ID: 1.20.1040.50 Beta-tubulin binding post-chaperonin cofactor. Chain: a, b. Fragment: VNG22671 cluster05 -> 1drgA 8.4541649 313 / 127 conP: 0.175 CATH-TRUNC --end-- VNG2268h one-of-top-five-correct: 0.420087486171736 CThresh: 3.590422 75 best_is: cluster17 VNG2268h cluster00 -> 1ap700 6.6655592 168 / 62 conP: 0.134 CATH-ID: 1.25.40.20 P19-ink4d. Chain: null. Synonym: cyclin dependent kinase 4 inhibitor d VNG2268h cluster01 -> 1a1w00 8.4840733 83 / 62 conP: 0.405 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG2268h cluster02 -> 1ocrE0 7.3209771 109 / 62 conP: 0.266 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG2268h cluster03 -> 2tpt01 7.7579224 107 / 62 conP: 0.296 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG2268h cluster04 -> 1ap700 7.5394498 168 / 62 conP: 0.166 CATH-ID: 1.25.40.20 P19-ink4d. Chain: null. Synonym: cyclin dependent kinase 4 inhibitor d VNG2268h cluster17 -> 1bzyA0 8.6318129 214 / 62 conP: 0.139 CATH-ID: 3.40.50.90 Hypoxanthine-guanine phosphoribosyltransferase. Chain: a, b, c, d. Eng --end-- VNG22690 one-of-top-five-correct: 0.124898637574802 CThresh: 8.240350 25 best_is: cluster00 VNG22690 cluster00 -> 1c82A 5.5194521 719 / 96 conP: 0.002 CATH-TRUNC VNG22690 cluster01 -> 1jweA0 4.3347607 114 / 96 conP: 0.092 CATH-ID: 1.10.860.10 Dnab helicase. Chain: a. Fragment: n-terminal domain. Engineered: yes. VNG22690 cluster02 -> 1bkdS1 3.7061620 189 / 96 conP: 0.046 CATH-ID: 1.20.870.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y VNG22690 cluster03 -> 1lkyA 3.9370401 77 / 96 conP: 0.105 CATH-TRUNC VNG22690 cluster04 -> 1eceA0 3.6317209 358 / 96 conP: 0.014 CATH-ID: 3.20.20.80 Endocellulase e1. Chain: a, b. Fragment: catalytic domain. Synonym: en --end-- VNG22700 one-of-top-five-correct: 0.404598958419486 CThresh: 6.963943 61 best_is: cluster15 VNG22700 cluster00 -> 1tafA0 6.0953122 68 / 137 conP: 0.324 CATH-ID: 1.10.20.10 Tfiid tbp associated factor 42. Chain: a. Fragment: residues 19 - 86. VNG22700 cluster01 -> 1jp6A 7.0955927 152 / 137 conP: 0.294 CATH-TRUNC VNG22700 cluster02 -> 2ezh00 5.8913239 65 / 137 conP: 0.315 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: igamma subdomain, residues 174 - 2 VNG22700 cluster03 -> 5eas01 4.7737458 160 / 137 conP: 0.170 CATH-ID: 1.50.30.10 5-epi-aristolochene synthase. Chain: null. Synonym: 5-epi-aristolochen VNG22700 cluster04 -> 1serA1 6.6450636 53 / 137 conP: 0.378 CATH-ID: 1.20.15.10 Seryl-tRNA synthetase complexed with tRNA-ser 2 (gga anticodon) VNG22700 cluster15 -> 1eyvA0 8.2789625 131 / 137 conP: 0.395 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr --end-- VNG2273h one-of-top-five-correct: 0.340482395440955 CThresh: 1.243188 100 best_is: cluster15 VNG2273h cluster00 -> 1lbd00 6.1390610 238 / 54 conP: 0.061 CATH-ID: 1.10.565.10 Retinoid x receptor. Chain: null. Fragment: histidine tag plus domain VNG2273h cluster01 -> 1hrkA 6.1390610 359 / 54 conP: 0.013 NO-CATH VNG2273h cluster02 -> 1lbd00 6.1390610 238 / 54 conP: 0.061 CATH-ID: 1.10.565.10 Retinoid x receptor. Chain: null. Fragment: histidine tag plus domain VNG2273h cluster03 -> 1e79A3 5.8610214 131 / 54 conP: 0.194 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG2273h cluster04 -> 1lbd00 5.9113534 238 / 54 conP: 0.057 CATH-ID: 1.10.565.10 Retinoid x receptor. Chain: null. Fragment: histidine tag plus domain VNG2273h cluster15 -> 1bpxA1 6.8221840 83 / 54 conP: 0.371 CATH-ID: 1.10.150.110 DNA polymerase beta. Chain: a. Synonym: pol-beta, beta-pol. Engineered --end-- VNG2274c one-of-top-five-correct: 0.483166686407837 CThresh: 3.117932 75 best_is: cluster02 VNG2274c cluster00 -> 1fiy02 8.2691270 374 / 76 conP: 0.060 CATH-ID: 3.20.20.60 Phosphoenolpyruvate carboxylase. Chain: null. Synonym: pepc. Engineere VNG2274c cluster01 -> 1fgxA0 7.3587552 272 / 76 conP: 0.112 CATH-ID: 3.90.550.20 Beta 1,4 galactosyltransferase. Chain: a, b. Fragment: catalytic domai VNG2274c cluster02 -> 1ghsA0 8.7969785 306 / 76 conP: 0.122 CATH-ID: 3.20.20.80 1,3-beta-glucanase (1,3-beta-d-glucan endohydrolase, isozyme ii) VNG2274c cluster03 -> 1reqA1 7.1235508 522 / 76 conP: 0.012 CATH-ID: 3.20.20.240 Methylmalonyl-coa mutase. Chain: a, b, c, d. Engineered: yes. Other_de VNG2274c cluster04 -> 1oya00 5.9205319 399 / 76 conP: 0.025 CATH-ID: 3.20.20.90 Old yellow enzyme (oxidized) (oye) --end-- VNG2277h one-of-top-five-correct: 0.233717098120957 CThresh: 6.956402 33 best_is: cluster14 VNG2277h cluster00 -> 1bu2A1 4.5241392 112 / 109 conP: 0.148 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG2277h cluster01 -> 1bt4A2 5.7566277 104 / 109 conP: 0.207 CATH-ID: 3.30.70.160 Phosphoserine aminotransferase. Chain: a. Fragment: one complete subun VNG2277h cluster02 -> 1csn01 5.5948019 82 / 109 conP: 0.223 CATH-ID: 3.30.200.20 Casein kinase-1. Heterogen: mg-atp VNG2277h cluster03 -> 1bjt04 5.6846386 102 / 109 conP: 0.206 CATH-ID: 3.30.70.230 Topoisomerase ii. Chain: null. Fragment: DNA-binding and cleavage core VNG2277h cluster04 -> 1b7yB5 4.8788521 191 / 109 conP: 0.104 CATH-ID: 3.40.690.10 Phenylalanyl-tRNA synthetase. Chain: a. Synonym: phers. Phenylalanyl-t VNG2277h cluster14 -> 1f1sA 6.7200498 814 / 109 conP: 0.004 NO-CATH --end-- VNG22820 one-of-top-five-correct: 0.22982855903346 CThresh: 5.498993 75 best_is: cluster05 VNG22820 cluster00 -> 1fiy02 5.7774449 374 / 57 conP: 0.005 CATH-ID: 3.20.20.60 Phosphoenolpyruvate carboxylase. Chain: null. Synonym: pepc. Engineere VNG22820 cluster01 -> 1b4rA0 6.6736612 80 / 57 conP: 0.195 CATH-ID: 2.60.40.670 Pkd1_human. Chain: a. Fragment: pkd domain. Engineered: yes VNG22820 cluster02 -> 2vik00 6.6736612 126 / 57 conP: 0.121 CATH-ID: 3.40.20.10 Villin 14t. Chain: null. Fragment: residues 1 - 126. Synonym: villin d VNG22820 cluster03 -> 1bak00 5.5533908 119 / 57 conP: 0.098 CATH-ID: 2.30.29.30 G-protein coupled receptor kinase 2. Chain: null. Fragment: c-terminal VNG22820 cluster04 -> 1qh5A0 5.5533908 260 / 57 conP: 0.019 CATH-ID: 3.60.15.10 Hydroxyacylglutathione hydrolase. Chain: a, b. Synonym: glyoxalase ii. VNG22820 cluster05 -> 1dfmA0 7.1833734 218 / 57 conP: 0.049 CATH-ID: 3.40.91.20 Endonuclease bglii. Chain: a, b. Fragment: bglii. Engineered: yes. Mut --end-- VNG22832 one-of-top-five-correct: 0.486979992488256 CThresh: 3.887499 75 best_is: cluster09 VNG22832 cluster00 -> 2kfnA1 7.6796357 217 / 102 conP: 0.276 CATH-ID: 3.30.420.10 Klenow fragment. Chain: a. Synonym: large fragment. Engineered: yes. B VNG22832 cluster01 -> 1vib00 6.5944764 54 / 102 conP: 0.461 CATH-ID: 1.20.15.90 Neurotoxin b-iv. Chain: null VNG22832 cluster02 -> 1augA0 7.2805345 210 / 102 conP: 0.263 CATH-ID: 3.40.630.20 Pyroglutamyl peptidase-1. Chain: a, b, c, d. Synonym: pgp-1, pyrrolido VNG22832 cluster03 -> 1kv5A 7.6206921 249 / 102 conP: 0.231 CATH-TRUNC VNG22832 cluster04 -> 1fiqB3 7.3311696 116 / 102 conP: 0.408 CATH-ID: 3.30.390.50 Xanthine oxidase. Chain: a. Fragment: residues 1-219. Synonym: xo. Xan VNG22832 cluster09 -> 1bia02 8.5957489 181 / 102 conP: 0.389 CATH-ID: 3.30.930.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG22850 one-of-top-five-correct: 0.333776305083837 CThresh: 7.545301 25 best_is: cluster00 VNG22850 cluster00 -> 1qd1B1 8.2318820 180 / 114 conP: 0.238 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG22850 cluster01 -> 1lki00 6.4157455 172 / 114 conP: 0.163 CATH-ID: 1.20.120.200 Leukemia inhibitory factor (lif) VNG22850 cluster02 -> 1dja00 5.3260636 258 / 114 conP: 0.077 CATH-ID: 3.40.710.10 Beta-lactamase. Chain: null. Synonym: penicillinase. Engineered: yes. VNG22850 cluster03 -> 1qqeA0 6.7568380 281 / 114 conP: 0.099 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG22850 cluster04 -> 1goiA 6.3082973 496 / 114 conP: 0.025 NO-CATH --end-- VNG22851 one-of-top-five-correct: 0.228414870976944 CThresh: 7.714900 25 best_is: cluster12 VNG22851 cluster00 -> 1d1dA2 4.6222840 80 / 102 conP: 0.146 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG22851 cluster01 -> 1kpsB 4.6501057 156 / 102 conP: 0.093 NO-CATH VNG22851 cluster02 -> 2tpt01 6.8065700 107 / 102 conP: 0.210 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG22851 cluster03 -> 1agrE2 5.1544871 80 / 102 conP: 0.166 CATH-ID: 1.10.167.10 Guanine nucleotide-binding protein g(i). Chain: a, d. Fragment: alpha- VNG22851 cluster04 -> 1l8wA 6.1532079 269 / 102 conP: 0.068 NO-CATH VNG22851 cluster12 -> 1octC1 7.1417312 71 / 102 conP: 0.273 CATH-ID: 1.10.260.10 Oct-1 (pou domain) --end-- VNG22960 one-of-top-five-correct: 0.444107328310352 CThresh: 3.120663 75 best_is: cluster17 VNG22960 cluster00 -> 1dpuA0 6.8972041 69 / 86 conP: 0.451 CATH-ID: 1.10.10.10 Replication protein a (rpa32) c-terminal domain. Chain: a. Fragment: c VNG22960 cluster01 -> 1c7sA2 4.3767064 127 / 86 conP: 0.198 CATH-ID: 3.30.379.10 Beta-n-acetylhexosaminidase. Chain: a. Fragment: mature protein, perip VNG22960 cluster02 -> 1ft9A2 7.9257221 79 / 86 conP: 0.505 CATH-ID: 1.10.10.10 Carbon monoxide oxidation system transcription regulator. Chain: a, b. VNG22960 cluster03 -> 1ah700 6.6054243 245 / 86 conP: 0.153 CATH-ID: 1.10.575.10 PhospholipasE C. Chain: null. Synonym: phosphatidylcholine-hydrolyzing VNG22960 cluster04 -> 1ft9A2 7.7280639 79 / 86 conP: 0.490 CATH-ID: 1.10.10.10 Carbon monoxide oxidation system transcription regulator. Chain: a, b. VNG22960 cluster17 -> 1gln05 8.1403045 98 / 86 conP: 0.481 CATH-ID: 1.10.10.350 Glutamyl-tRNA synthetase. Chain: null --end-- VNG22961 one-of-top-five-correct: 0.439120306887242 CThresh: 3.013143 82 best_is: cluster01 VNG22961 cluster00 -> 1e8gA3 7.7366416 231 / 74 conP: 0.163 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, VNG22961 cluster01 -> 1psdA3 8.3094233 82 / 74 conP: 0.485 CATH-ID: 3.30.70.260 D-3-phosphoglycerate dehydrogenase (phosphoglycerate dehydrogenase) VNG22961 cluster02 -> 1ixh01 5.9877353 155 / 74 conP: 0.194 CATH-ID: 3.40.190.10 Phosphate-binding protein. Chain: null. Engineered: yes. Biological_un VNG22961 cluster03 -> 1iibA0 6.1948600 103 / 74 conP: 0.295 CATH-ID: 3.40.50.270 Enzyme iib of the cellobiose-specific phosphotransferase system. Chain VNG22961 cluster04 -> 1f08A0 8.0272671 148 / 74 conP: 0.317 CATH-ID: 3.30.70.750 Replication protein e1. Chain: a, b. Fragment: DNA-binding domain. Eng --end-- VNG2299h one-of-top-five-correct: 0.203258122241983 CThresh: 5.133249 75 best_is: cluster18 VNG2299h cluster00 -> 1fua00 4.5290333 206 / 68 conP: 0.047 CATH-ID: 3.40.225.10 L-fuculose-1-phosphate aldolase. Chain: null. Engineered: yes. Other_d VNG2299h cluster01 -> 1lkyA 5.9918494 77 / 68 conP: 0.220 NO-CATH VNG2299h cluster02 -> 1dn1A2 5.5668870 107 / 68 conP: 0.155 CATH-ID: 3.90.830.10 Syntaxin binding protein 1. Chain: a. Synonym: nsec1. Engineered: yes. VNG2299h cluster03 -> 1ev0A0 5.6113358 58 / 68 conP: 0.235 CATH-ID: 3.30.1070.10 Mine. Chain: a, b. Fragment: mine topological specificity domain. Syno VNG2299h cluster04 -> 1a4802 5.1419246 139 / 68 conP: 0.104 CATH-ID: 3.30.470.20 Phosphoribosylaminoimidazole-succinocarboxamide synthase. Chain: null. VNG2299h cluster18 -> 1ab402 6.3378503 86 / 68 conP: 0.221 CATH-ID: 3.30.70.220 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol --end-- VNG23011 one-of-top-five-correct: 0.305037510369364 CThresh: 3.222493 75 best_is: cluster16 VNG23011 cluster00 -> 2ng101 5.4150408 89 / 73 conP: 0.264 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG23011 cluster01 -> 1fbxA2 5.5206645 136 / 73 conP: 0.190 CATH-ID: 3.50.11.20 Gtp cyclohydrolase i. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG23011 cluster02 -> 1qhiA0 5.9246147 300 / 73 conP: 0.052 CATH-ID: 3.40.50.300 Thymidine kinase. Chain: a, b. Synonym: tk. Engineered: yes. Biologica VNG23011 cluster03 -> 1aroP3 6.8429362 150 / 73 conP: 0.231 CATH-ID: 3.30.70.370 T7 RNA polymerase. Chain: p. Engineered: yes. Mutation: c347s, c723s, VNG23011 cluster04 -> 1ftkA1 6.4381822 104 / 73 conP: 0.294 CATH-ID: 3.40.190.10 Glutamate receptor subunit 2. Chain: a. Fragment: ligand binding core, VNG23011 cluster16 -> 1a9xA4 6.8429362 150 / 73 conP: 0.231 CATH-ID: 1.10.1030.10 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee --end-- VNG23021 one-of-top-five-correct: 0.323229653150834 CThresh: 6.012556 75 best_is: cluster11 VNG23021 cluster00 -> 1ospO3 5.3322407 102 / 96 conP: 0.195 CATH-ID: 3.66.10.1 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG23021 cluster01 -> 1a9xA1 7.1186407 116 / 96 conP: 0.268 CATH-ID: 3.40.50.20 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG23021 cluster02 -> 1rkd02 6.4247919 256 / 96 conP: 0.098 CATH-ID: 3.90.77.20 Ribokinase. Chain: null. Engineered: yes. Biological_unit: homodimer VNG23021 cluster03 -> 1dpgA1 5.7808661 175 / 96 conP: 0.140 CATH-ID: 3.40.50.720 Glucose 6-phosphate dehydrogenase. Chain: a, b. Synonym: g6pd. Enginee VNG23021 cluster04 -> 1ei5A2 5.8456712 82 / 96 conP: 0.246 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG23021 cluster11 -> 1whsB 7.8157383 147 / 96 conP: 0.264 CATH-TRUNC --end-- VNG2304h one-of-top-five-correct: 0.277603925448492 CThresh: 6.352769 75 best_is: cluster13 VNG2304h cluster00 -> 1wjbA0 6.3186065 55 / 78 conP: 0.253 CATH-ID: 1.10.10.200 HIV-1 integrase. Chain: a, b VNG2304h cluster01 -> 1qgkA 5.4478809 876 / 78 conP: 0.000 NO-CATH VNG2304h cluster02 -> 2eiaA1 5.0723489 132 / 78 conP: 0.106 CATH-ID: 1.10.375.10 Eiav capsid protein p26. Chain: a, b. Engineered: yes VNG2304h cluster03 -> 1ao3A0 5.4478809 187 / 78 conP: 0.075 CATH-ID: 3.40.50.410 Von willebrand factor. Chain: a, b. Fragment: a3 domain. Engineered: s VNG2304h cluster04 -> 1ad3A2 6.4671364 195 / 78 conP: 0.092 CATH-ID: 3.40.309.10 Aldehyde dehydrogenase (class 3). Chain: a, b. Synonym: aldh. Engineer VNG2304h cluster13 -> 1i6kA 7.7847243 316 / 78 conP: 0.047 NO-CATH --end-- VNG23080 one-of-top-five-correct: 0.576749129143948 CThresh: 6.991381 35 best_is: cluster09 VNG23080 cluster00 -> 1zymA2 7.1325044 126 / 139 conP: 0.328 CATH-ID: 1.10.274.10 Enzyme i. Chain: a, b. Fragment: amino-terminal domain residues 1 - 25 VNG23080 cluster01 -> 1vib00 7.0498917 54 / 139 conP: 0.407 CATH-ID: 1.20.15.90 Neurotoxin b-iv. Chain: null VNG23080 cluster02 -> 1b8fA2 5.9041293 313 / 139 conP: 0.118 CATH-ID: 1.20.200.10 Histidine ammonia-lyase. Chain: a. Synonym: hal, histidase. Engineered VNG23080 cluster03 -> 1cxzB0 9.9697753 86 / 139 conP: 0.575 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid VNG23080 cluster04 -> 1joyA0 8.1637220 67 / 139 conP: 0.470 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG23080 cluster09 -> 1quuA2 10.150609 122 / 139 conP: 0.544 CATH-ID: 1.20.1040.10 Human skeletal muscle alpha-actinin 2. Chain: a. Fragment: spectrin-li --end-- VNG23200 one-of-top-five-correct: 0.380446525288748 CThresh: 5.500856 75 best_is: cluster16 VNG23200 cluster00 -> 1lbd00 5.4544421 238 / 92 conP: 0.086 CATH-ID: 1.10.565.10 Retinoid x receptor. Chain: null. Fragment: histidine tag plus domain VNG23200 cluster01 -> 1c3d00 7.5882514 294 / 92 conP: 0.102 CATH-ID: 1.50.10.40 C3d. Chain: null. Engineered: yes. Mutation: c17a. Biological_unit: mo VNG23200 cluster02 -> 1dvkA0 6.5355132 149 / 92 conP: 0.203 CATH-ID: 1.20.940.10 Prp18. Chain: a, b. Engineered: yes VNG23200 cluster03 -> 1hfaA 6.8116526 263 / 92 conP: 0.104 CATH-TRUNC VNG23200 cluster04 -> 1ia8A 6.6177654 272 / 92 conP: 0.093 CATH-TRUNC VNG23200 cluster16 -> 2cb5A 8.3627504 453 / 92 conP: 0.041 CATH-TRUNC --end-- VNG23201 one-of-top-five-correct: 0.50934169777969 CThresh: 6.983608 35 best_is: cluster18 VNG23201 cluster00 -> 1ad600 6.8483454 185 / 113 conP: 0.185 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG23201 cluster01 -> 2a3dA0 6.6461605 73 / 113 conP: 0.300 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG23201 cluster02 -> 1ljwA 8.2602579 141 / 113 conP: 0.309 CATH-TRUNC VNG23201 cluster03 -> 1ddbA0 5.7585553 195 / 113 conP: 0.135 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG23201 cluster04 -> 1lhs00 8.8065682 153 / 113 conP: 0.327 CATH-ID: 1.10.490.10 Myoglobin (aquo-met) VNG23201 cluster18 -> 1lre00 9.9943026 81 / 113 conP: 0.517 CATH-ID: 1.20.81.10 Receptor-associated protein. Chain: null. Fragment: n-terminal domain, --end-- VNG23230 one-of-top-five-correct: 0.318348440942799 CThresh: 7.216545 25 best_is: cluster08 VNG23230 cluster00 -> 1jvr00 7.7139476 137 / 113 conP: 0.271 CATH-ID: 1.10.185.10 Human t-cell leukemia virus type ii matrix protein. Chain: null. Synon VNG23230 cluster01 -> 1d5rA1 5.5282949 174 / 113 conP: 0.136 CATH-ID: 3.90.190.10 Phosphoinositide phosphotase pten. Chain: a. Fragment: residues 7-353. VNG23230 cluster02 -> 2a3dA0 6.2302039 73 / 113 conP: 0.265 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG23230 cluster03 -> 1cem00 7.0980315 363 / 113 conP: 0.071 CATH-ID: 1.50.10.10 Cellulase cela (1,4-beta-d-glucan-glucanohydrolase). Chain: null. Frag VNG23230 cluster04 -> 1dtoA1 7.6796357 102 / 113 conP: 0.314 CATH-ID: 1.10.287.30 Regulatory protein e2. Chain: a. Fragment: transactivation domain. Eng VNG23230 cluster08 -> 1cf9A2 7.9133330 121 / 113 conP: 0.303 CATH-ID: 1.10.422.10 Catalase hpii. Chain: a, b, c, d. Engineered: yes. Mutation: yes --end-- VNG23231 one-of-top-five-correct: 0.375844487031986 CThresh: 6.984406 67 best_is: cluster04 VNG23231 cluster00 -> 1hy1A3 7.5410861 72 / 105 conP: 0.338 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a VNG23231 cluster01 -> 1jud02 7.2884782 75 / 105 conP: 0.317 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG23231 cluster02 -> 1bu2A1 5.9425105 112 / 105 conP: 0.198 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG23231 cluster03 -> 1f16A0 5.8257216 192 / 105 conP: 0.123 CATH-ID: 1.10.437.10 Apoptosis regulator bax, membrane isoform alpha. Chain: a. Engineered: VNG23231 cluster04 -> 1d2tA 8.6859646 222 / 105 conP: 0.207 NO-CATH --end-- VNG2324h one-of-top-five-correct: 0.619811143404482 CThresh: 7.016669 25 best_is: cluster13 VNG2324h cluster00 -> 1k92A 10.684262 444 / 122 conP: 0.151 NO-CATH VNG2324h cluster01 -> 1pvdA1 7.8930657 179 / 122 conP: 0.267 CATH-ID: 3.40.50.970 Pyruvate decarboxylase (pdc) VNG2324h cluster02 -> 1dioA 8.4775548 551 / 122 conP: 0.048 NO-CATH VNG2324h cluster03 -> 2ifeA0 8.2043036 91 / 122 conP: 0.398 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin VNG2324h cluster04 -> 2ifeA0 10.149173 91 / 122 conP: 0.536 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin VNG2324h cluster13 -> 1cz1A0 11.040031 394 / 122 conP: 0.208 CATH-ID: 3.20.20.80 Exo-b-(1,3)-glucanase. Chain: a. Engineered: yes --end-- VNG23300 one-of-top-five-correct: 0.647556909964207 CThresh: 6.962659 47 best_is: cluster04 VNG23300 cluster00 -> 1thm00 7.3259162 279 / 128 conP: 0.165 CATH-ID: 3.40.50.200 Thermitase VNG23300 cluster01 -> 1mioB4 8.3238867 98 / 128 conP: 0.415 CATH-ID: 3.40.50.10 Nitrogenase molybdenum-iron protein VNG23300 cluster02 -> 1f0kA1 8.8470484 175 / 128 conP: 0.352 CATH-ID: 3.40.50.1960 Udp-n-acetylglucosamine-n-acetylmuramyl- (pentapeptide) pyrophosphoryl VNG23300 cluster03 -> 1rpjA1 7.8447126 139 / 128 conP: 0.331 CATH-ID: 3.40.50.8600 Precursor of periplasmic sugar receptor. Chain: a. Synonym: albp. Biol VNG23300 cluster04 -> 1pda01 11.206247 109 / 128 conP: 0.606 CATH-ID: 3.40.190.30 Porphobilinogen deaminase --end-- VNG23331 one-of-top-five-correct: 0.35571636317809 CThresh: 4.775576 75 best_is: cluster03 VNG23331 cluster00 -> 1qsaA2 5.6074624 70 / 87 conP: 0.281 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG23331 cluster01 -> 1uaaA2 7.7366416 74 / 87 conP: 0.412 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG23331 cluster02 -> 1rgp00 5.7046244 189 / 87 conP: 0.134 CATH-ID: 1.10.555.10 Rhogap. Chain: null. Fragment: gtpase activation domain. Synonym: cdc4 VNG23331 cluster03 -> 1cliA1 7.8565352 166 / 87 conP: 0.257 CATH-ID: 3.30.70.460 Phosphoribosyl-aminoimidazole synthetase. Chain: a, b, c, d. Engineere VNG23331 cluster04 -> 1qrjB1 6.3768320 114 / 87 conP: 0.255 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E --end-- VNG23332 one-of-top-five-correct: 0.29615088624156 CThresh: 3.718011 75 best_is: cluster13 VNG23332 cluster00 -> 1fjgM1 6.4053723 71 / 81 conP: 0.364 CATH-TRUNC VNG23332 cluster01 -> 2azoA 5.9636418 218 / 81 conP: 0.124 NO-CATH VNG23332 cluster02 -> 1fl2A1 5.9636418 182 / 81 conP: 0.162 CATH-ID: 3.50.50.60 Alkyl hydroperoxide reductase subunit f. Chain: a. Fragment: c-termina VNG23332 cluster03 -> 1ryp10 5.3590426 222 / 81 conP: 0.103 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG23332 cluster04 -> 1bob02 5.1575096 124 / 81 conP: 0.201 CATH-ID: 3.40.630.30 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG23332 cluster13 -> 1t7pA3 6.7697739 178 / 81 conP: 0.201 CATH-ID: 3.30.70.370 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi --end-- VNG2337c one-of-top-five-correct: 0.544202629539174 CThresh: 6.744084 75 best_is: cluster08 VNG2337c cluster00 -> 1d0nA3 6.4901909 121 / 115 conP: 0.248 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG2337c cluster01 -> 1fjgC1 7.4404439 91 / 115 conP: 0.342 CATH-TRUNC VNG2337c cluster02 -> 1tbd00 7.9572248 134 / 115 conP: 0.317 CATH-ID: 3.30.70.290 Sv40 t-antigen. Chain: null. Fragment: DNA binding domain VNG2337c cluster03 -> 1tbd00 7.9572248 134 / 115 conP: 0.317 CATH-ID: 3.30.70.290 Sv40 t-antigen. Chain: null. Fragment: DNA binding domain VNG2337c cluster04 -> 1qd1B2 7.0490244 145 / 115 conP: 0.251 CATH-ID: 3.30.70.670 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG2337c cluster08 -> 1fjgC1 10.223126 91 / 115 conP: 0.537 CATH-TRUNC --end-- VNG23382 one-of-top-five-correct: 0.263729226680182 CThresh: 6.456083 75 best_is: cluster15 VNG23382 cluster00 -> 1ifc00 4.8364825 131 / 102 conP: 0.145 CATH-ID: 2.40.128.20 Intestinal fatty acid binding protein (apo form 2) VNG23382 cluster01 -> 1d5xB 5.2137690 183 / 102 conP: 0.117 CATH-TRUNC VNG23382 cluster02 -> 1qd1B1 5.2137690 180 / 102 conP: 0.119 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot VNG23382 cluster03 -> 1gal03 6.4463034 267 / 102 conP: 0.096 CATH-ID: 3.30.560.10 Glucose oxidase VNG23382 cluster04 -> 2ng101 5.8453474 89 / 102 conP: 0.233 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG23382 cluster15 -> 1mkaA0 7.0926468 171 / 102 conP: 0.198 CATH-ID: 3.10.129.10 Beta-hydroxydecanoyl thiol ester dehydrase. Chain: a, b. Synonym: beta --end-- VNG2339c one-of-top-five-correct: 0.381022842824411 CThresh: 8.487488 25 best_is: cluster11 VNG2339c cluster00 -> 1bx4A1 6.9522042 279 / 138 conP: 0.131 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes. Biological_unit: monomer VNG2339c cluster01 -> 1cjxA2 6.1086962 202 / 138 conP: 0.149 CATH-ID: 3.10.180.10 4-hydroxyphenylpyruvate dioxygenase. Chain: a, b, c, d. Engineered: ye VNG2339c cluster02 -> 2cblA3 6.4075213 86 / 138 conP: 0.255 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 VNG2339c cluster03 -> 1ospO2 8.0655558 76 / 138 conP: 0.368 CATH-ID: 2.20.50.10 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG2339c cluster04 -> 1ospO3 8.3218778 102 / 138 conP: 0.354 CATH-ID: 3.66.10.1 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG2339c cluster11 -> 2cblA3 8.6764724 86 / 138 conP: 0.397 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 --end-- VNG2341h one-of-top-five-correct: 0.428000979416511 CThresh: 4.667304 75 best_is: cluster03 VNG2341h cluster00 -> 1jwfA 8.1458019 139 / 72 conP: 0.255 NO-CATH VNG2341h cluster01 -> 1gdj00 7.5192609 153 / 72 conP: 0.200 CATH-ID: 1.10.490.10 Leghemoglobin (deoxy) VNG2341h cluster02 -> 1qhwA0 7.5192609 300 / 72 conP: 0.056 CATH-ID: 3.60.21.10 Purple acid phosphatase. Chain: a. Synonym: tartrate-resistant acid ph VNG2341h cluster03 -> 1qkrA0 8.9811899 172 / 72 conP: 0.240 CATH-ID: 1.20.120.230 Vinculin. Chain: a, b. Fragment: c-terminal domain. Synonym: tail doma VNG2341h cluster04 -> 1ft1B0 7.2879466 416 / 72 conP: 0.018 CATH-ID: 1.50.10.40 Protein farnesyltransferase. Chain: a, b. Engineered: yes --end-- VNG2342h one-of-top-five-correct: 0.304643587683061 CThresh: 8.783080 25 best_is: cluster03 VNG2342h cluster00 -> 1rpo00 6.0514009 61 / 133 conP: 0.239 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid VNG2342h cluster01 -> 1bvsA3 5.7107765 44 / 133 conP: 0.237 CATH-ID: 1.10.8.10 Ruva. Chain: a, b, c, d, e, f, g, h. Engineered: yes. Biological_unit: VNG2342h cluster02 -> 1jfgA 7.6859692 354 / 133 conP: 0.097 NO-CATH VNG2342h cluster03 -> 1k40A 7.9934077 126 / 133 conP: 0.281 NO-CATH VNG2342h cluster04 -> 1cpq00 5.9311797 129 / 133 conP: 0.175 CATH-ID: 1.20.120.10 Cytochrome c'. Chain: null --end-- VNG23431 one-of-top-five-correct: 0.261583618628201 CThresh: 7.651143 25 best_is: cluster12 VNG23431 cluster00 -> 2ilk01 5.8523634 106 / 121 conP: 0.208 CATH-ID: 1.20.120.200 Interleukin-10. Chain: null. Engineered: yes VNG23431 cluster01 -> 1pklA1 5.4867664 155 / 121 conP: 0.151 CATH-ID: 3.40.50.50 Pyruvate kinase. Chain: a, b, c, d, e, f, h, g. Engineered: yes VNG23431 cluster02 -> 1msk02 4.7743931 88 / 121 conP: 0.176 CATH-ID: 1.10.288.10 Cobalamin-dependent methionine synthase. Chain: null. Fragment: activa VNG23431 cluster03 -> 1e7aA3 6.3700288 92 / 121 conP: 0.249 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG23431 cluster04 -> 1fadA0 5.4268317 95 / 121 conP: 0.199 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG23431 cluster12 -> 1fts01 7.1716524 84 / 121 conP: 0.304 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: --end-- VNG23441 one-of-top-five-correct: 0.153964095625599 CThresh: 7.161331 25 best_is: cluster10 VNG23441 cluster00 -> 1dcoA0 5.2356214 99 / 87 conP: 0.140 CATH-ID: 3.30.70.200 Dcoh. Chain: a, b, c, d, e, f, g, h. Synonym: dimerization cofactor of VNG23441 cluster01 -> 1e7kA0 4.2433697 125 / 87 conP: 0.090 CATH-ID: 3.30.70.480 15.5 kd RNA binding protein. Synonym: nhp2/rs6 family protein yel026w VNG23441 cluster02 -> 1hp7A1 4.9650917 95 / 87 conP: 0.134 CATH-ID: 2.30.39.10 Alpha-1-antitrypsin. Chain: a. Engineered: yes. Mutation: yes VNG23441 cluster03 -> 1hdoA0 5.1935764 205 / 87 conP: 0.064 CATH-ID: 3.40.50.720 Biliverdin ix beta reductase. Chain: a. Synonym: flavin reductase (ec VNG23441 cluster04 -> 1jfqH 5.1935764 220 / 87 conP: 0.057 CATH-TRUNC VNG23441 cluster10 -> 1amf01 5.9002527 119 / 87 conP: 0.144 CATH-ID: 3.40.190.10 Molybdate transport protein moda. Chain: null. Fragment: n-domain, c-d --end-- VNG23460 one-of-top-five-correct: 0.600868664896589 CThresh: 7.188439 25 best_is: cluster09 VNG23460 cluster00 -> 1hbmA 6.5270762 543 / 117 conP: 0.024 CATH-TRUNC VNG23460 cluster01 -> 1eijA0 6.8783860 72 / 117 conP: 0.314 CATH-ID: 1.10.1190.10 Hypothetical protein mth1615. Chain: a. Other_details: homologous to h VNG23460 cluster02 -> 1ytfD1 5.5001509 53 / 117 conP: 0.257 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG23460 cluster03 -> 1dkxA2 8.4421626 80 / 117 conP: 0.407 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG23460 cluster04 -> 1a1w00 5.8166130 83 / 117 conP: 0.240 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG23460 cluster09 -> 2a3dA0 11.013706 73 / 117 conP: 0.600 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG23462 one-of-top-five-correct: 0.532897224514344 CThresh: 3.621366 75 best_is: cluster03 VNG23462 cluster00 -> 1rkd02 7.0786897 256 / 78 conP: 0.114 CATH-ID: 3.90.77.20 Ribokinase. Chain: null. Engineered: yes. Biological_unit: homodimer VNG23462 cluster01 -> 1ash00 6.8748386 147 / 78 conP: 0.244 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG23462 cluster02 -> 1ayx00 7.8940941 492 / 78 conP: 0.019 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes VNG23462 cluster03 -> 1bu2A2 9.5249028 102 / 78 conP: 0.510 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG23462 cluster04 -> 1h6pA 8.7948515 188 / 78 conP: 0.280 CATH-TRUNC --end-- VNG23470 one-of-top-five-correct: 0.331257911294232 CThresh: 5.380666 75 best_is: cluster01 VNG23470 cluster00 -> 1div01 6.3583355 59 / 89 conP: 0.322 CATH-ID: 3.40.5.10 Ribosomal protein l9. Chain: null. Biological_unit: forms a tight one- VNG23470 cluster01 -> 1a6dA2 7.7883950 106 / 89 conP: 0.331 CATH-ID: 3.30.260.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer VNG23470 cluster02 -> 1smtB0 5.2549579 101 / 89 conP: 0.199 CATH-ID: 1.10.10.10 Transcriptional repressor smtb. Chain: a, b. Engineered: yes. Biologic VNG23470 cluster03 -> 1fseA0 6.7652840 67 / 89 conP: 0.334 CATH-ID: 1.10.10.10 Gere. Chain: a, b, c, d, e, f. Engineered: yes VNG23470 cluster04 -> 1dpuA0 5.8266377 69 / 89 conP: 0.274 CATH-ID: 1.10.10.10 Replication protein a (rpa32) c-terminal domain. Chain: a. Fragment: c --end-- VNG23471 one-of-top-five-correct: 0.307811706830221 CThresh: 6.994613 39 best_is: cluster18 VNG23471 cluster00 -> 1efvB0 5.7587491 252 / 105 conP: 0.084 CATH-ID: 3.40.50.1120 Electron transfer flavoprotein. Chain: a, b. Synonym: etf, hetf, elect VNG23471 cluster01 -> 1k56A0 6.0107209 242 / 105 conP: 0.095 CATH-ID: 3.40.710.10 Oxa10 beta-lactamase. Chain: a, b, c. Synonym: beta-lactamase pse-2. E VNG23471 cluster02 -> 1fnnA3 6.6365364 104 / 105 conP: 0.241 CATH-ID: 1.10.10.10 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG23471 cluster03 -> 1glqA2 5.7364302 108 / 105 conP: 0.192 CATH-ID: 1.20.1050.10 Glutathione s-transferase yfyf (class pi) complexed with s-(p-nitroben VNG23471 cluster04 -> 2lefA0 5.4012240 86 / 105 conP: 0.200 CATH-ID: 1.10.30.10 Lymphoid enhancer-binding factor. Chain: a. Fragment: hmg. Synonym: le VNG23471 cluster18 -> 1xsm00 7.8607136 288 / 105 conP: 0.117 CATH-ID: 1.10.620.20 Ribonucleotide reductase r2. Chain: null. Synonym: r2. Engineered: yes --end-- VNG23472 one-of-top-five-correct: 0.466729609586752 CThresh: 2.389717 100 best_is: cluster16 VNG23472 cluster00 -> 1om2A0 6.3928703 95 / 71 conP: 0.342 CATH-ID: 1.20.960.10 Mitochondrial import receptor subunit tom20. Chain: a. Fragment: resid VNG23472 cluster01 -> 1cf9A2 5.8864755 121 / 71 conP: 0.258 CATH-ID: 1.10.422.10 Catalase hpii. Chain: a, b, c, d. Engineered: yes. Mutation: yes VNG23472 cluster02 -> 1qhiA0 6.0930756 300 / 71 conP: 0.059 CATH-ID: 3.40.50.300 Thymidine kinase. Chain: a, b. Synonym: tk. Engineered: yes. Biologica VNG23472 cluster03 -> 1gpmA3 6.7222690 108 / 71 conP: 0.335 CATH-ID: 3.30.300.10 Gmp synthetase. Chain: a, b, c, d. Synonym: xmp aminase. Engineered: y VNG23472 cluster04 -> 1jfiB0 5.4638823 135 / 71 conP: 0.211 CATH-TRUNC VNG23472 cluster16 -> 1dceA1 8.4001179 317 / 71 conP: 0.094 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg --end-- VNG2353h one-of-top-five-correct: 0.375097747581221 CThresh: 7.559844 25 best_is: cluster06 VNG2353h cluster00 -> 1ku3A 6.5413560 61 / 108 conP: 0.272 NO-CATH VNG2353h cluster01 -> 1br6A2 7.1327007 88 / 108 conP: 0.271 CATH-ID: 4.10.470.10 Ricin. Chain: a. Synonym: rta. Engineered: yes VNG2353h cluster02 -> 1ehiA2 6.2401706 144 / 108 conP: 0.166 CATH-ID: 3.30.470.20 D-alanine:d-lactate ligase. Chain: a, b. Synonym: lmddl2. Engineered: VNG2353h cluster03 -> 1ekjA0 5.8858888 210 / 108 conP: 0.105 CATH-ID: 3.40.1050.10 Beta-carbonic anhydrase. Chain: a, b, c, d, e, f, g, h. Ec: 4.2.1.1 VNG2353h cluster04 -> 1dlc01 6.6751962 229 / 108 conP: 0.115 CATH-ID: 1.20.190.10 Delta-endotoxin cryiiia (bt13) VNG2353h cluster06 -> 4proC1 8.8699028 79 / 108 conP: 0.394 CATH-ID: 3.30.300.50 Alpha-lytic protease. Chain: a, b, c, d. Fragment: chain a, b, mature --end-- VNG23561 one-of-top-five-correct: 0.322061953790089 CThresh: 2.472613 100 best_is: cluster28 VNG23561 cluster00 -> 1dgnA0 6.4970087 89 / 53 conP: 0.268 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG23561 cluster01 -> 1a8vA1 6.0755366 49 / 53 conP: 0.355 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG23561 cluster02 -> 1bhdA0 5.0421859 108 / 53 conP: 0.158 CATH-ID: 1.10.418.10 Utrophin. Chain: a, b. Fragment: 2nd calponin homology domain from act VNG23561 cluster03 -> 1a0b00 6.6450636 117 / 53 conP: 0.209 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG23561 cluster04 -> 1rthA3 6.4160811 94 / 53 conP: 0.251 CATH-ID: 3.90.840.10 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere VNG23561 cluster28 -> 1dgnA0 7.1748374 89 / 53 conP: 0.308 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin --end-- VNG23562 one-of-top-five-correct: 0.560123639625474 CThresh: 3.004794 94 best_is: cluster00 VNG23562 cluster00 -> 1cokA0 9.5233264 68 / 79 conP: 0.622 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi VNG23562 cluster01 -> 1cokA0 8.3461301 68 / 79 conP: 0.540 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi VNG23562 cluster02 -> 1cokA0 8.0049957 68 / 79 conP: 0.515 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi VNG23562 cluster03 -> 1cokA0 8.7579041 68 / 79 conP: 0.569 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi VNG23562 cluster04 -> 1cokA0 9.1071353 68 / 79 conP: 0.593 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi --end-- VNG23580 one-of-top-five-correct: 0.245756043887267 CThresh: 5.579484 75 best_is: cluster09 VNG23580 cluster00 -> 1whtA0 5.6736134 250 / 71 conP: 0.043 CATH-ID: 3.40.50.1570 Serine carboxypeptidase ii complexed with l-benzylsuccinate VNG23580 cluster01 -> 1bu2A1 5.5724420 112 / 71 conP: 0.144 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG23580 cluster02 -> 1e79A3 6.5963734 131 / 71 conP: 0.158 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG23580 cluster03 -> 1mhdA0 5.5747142 123 / 71 conP: 0.132 CATH-ID: 3.90.520.10 Smad3. Chain: a, b. Fragment: mh1 domain, residues 1 - 144. Synonym: s VNG23580 cluster04 -> 1lki00 5.0444201 172 / 71 conP: 0.074 CATH-ID: 1.20.120.200 Leukemia inhibitory factor (lif) VNG23580 cluster09 -> 1il4A 7.1417312 267 / 71 conP: 0.054 CATH-TRUNC --end-- VNG23591 one-of-top-five-correct: 0.455510586360976 CThresh: 2.151703 100 best_is: cluster07 VNG23591 cluster00 -> 1uaaA4 5.4307910 162 / 72 conP: 0.181 CATH-ID: 1.10.486.10 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG23591 cluster01 -> 1e7aA5 7.3104139 112 / 72 conP: 0.382 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG23591 cluster02 -> 1e7aA3 5.9561678 92 / 72 conP: 0.337 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG23591 cluster03 -> 1dar01 5.4307910 258 / 72 conP: 0.080 CATH-ID: 3.40.50.300 Elongation factor g. Chain: null. Synonym: ef-g VNG23591 cluster04 -> 1e7aA3 5.9561678 92 / 72 conP: 0.337 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG23591 cluster07 -> 1e7aA5 8.1458019 112 / 72 conP: 0.440 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG23610 one-of-top-five-correct: 0.276550169584829 CThresh: 2.680369 100 best_is: cluster14 VNG23610 cluster00 -> 1bvp13 4.7277159 96 / 52 conP: 0.156 CATH-ID: 1.10.170.10 Bluetongue virus 10 (usa) vp7 (btv-10 (usa) vp7) VNG23610 cluster01 -> 1f3mA0 5.0848658 70 / 52 conP: 0.226 CATH-ID: 3.90.810.10 Serine/threonine-protein kinase pak-alpha. Chain: a, b. Fragment: pak1 VNG23610 cluster02 -> 1vpu00 4.9353244 45 / 52 conP: 0.281 CATH-ID: 1.10.195.10 Vpu protein. Chain: null. Fragment: cytoplasmic domain residues 39 - 8 VNG23610 cluster03 -> 1qhaA2 5.3151537 261 / 52 conP: 0.023 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG23610 cluster04 -> 2bct00 6.2363054 502 / 52 conP: 0.001 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG23610 cluster14 -> 1bvp13 6.6968813 96 / 52 conP: 0.247 CATH-ID: 1.10.170.10 Bluetongue virus 10 (usa) vp7 (btv-10 (usa) vp7) --end-- VNG23612 one-of-top-five-correct: 0.519959923765953 CThresh: 3.232948 75 best_is: cluster00 VNG23612 cluster00 -> 1ddbA0 9.1839092 195 / 79 conP: 0.315 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG23612 cluster01 -> 1qqiA0 5.9348413 104 / 79 conP: 0.288 CATH-ID: 1.10.10.10 Phosphate regulon transcriptional regulatory protein phob. Chain: a. F VNG23612 cluster02 -> 1ptvA0 7.1431995 297 / 79 conP: 0.094 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase 1b. Chain: a. Engineered: yes. Mutation: VNG23612 cluster03 -> 1ddbA0 7.8130244 195 / 79 conP: 0.236 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG23612 cluster04 -> 1ezfA 6.8392431 323 / 79 conP: 0.070 CATH-TRUNC --end-- VNG23631 one-of-top-five-correct: 0.231043110684392 CThresh: 4.969643 75 best_is: cluster11 VNG23631 cluster00 -> 1g6wA1 5.6025348 97 / 67 conP: 0.172 CATH-ID: 3.40.30.10 Ure2 protein. Chain: a, b, c, d. Fragment: globular domain (residues 9 VNG23631 cluster01 -> 1gr7A 5.3930349 126 / 67 conP: 0.126 CATH-TRUNC VNG23631 cluster02 -> 1dkiA 5.1756703 236 / 67 conP: 0.041 CATH-TRUNC VNG23631 cluster03 -> 1adjA2 6.2288745 96 / 67 conP: 0.201 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Biological_unit: active a VNG23631 cluster04 -> 2blmA 5.3891025 260 / 67 conP: 0.034 CATH-TRUNC VNG23631 cluster11 -> 1skf00 6.7343530 262 / 67 conP: 0.049 CATH-ID: 3.40.710.10 D-alanyl-d-alanine transpeptidase. Chain: null. Ec: 3.4.16.4 --end-- VNG23682 one-of-top-five-correct: 0.5775684212056 CThresh: 5.070941 75 best_is: cluster03 VNG23682 cluster00 -> 1jgjA0 7.3061758 217 / 121 conP: 0.274 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG23682 cluster01 -> 1rpo00 7.2328814 61 / 121 conP: 0.477 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid VNG23682 cluster02 -> 1rpo00 8.3831686 61 / 121 conP: 0.559 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid VNG23682 cluster03 -> 1fipA0 9.6987269 73 / 121 conP: 0.634 CATH-ID: 1.10.1230.10 Fis protein (factor for inversion stimulation) mutant with pro 61 repl VNG23682 cluster04 -> 1lbkA 6.4369568 208 / 121 conP: 0.236 CATH-TRUNC --end-- VNG2369c one-of-top-five-correct: 0.360927821544355 CThresh: 4.232755 75 best_is: cluster05 VNG2369c cluster00 -> 1f1zA2 7.1431995 99 / 79 conP: 0.323 CATH-ID: 1.10.10.10 Tnsa endonuclease. Chain: a, b. Synonym: transposase VNG2369c cluster01 -> 1ryp20 5.8239133 233 / 79 conP: 0.090 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG2369c cluster02 -> 1tca00 7.6389591 317 / 79 conP: 0.074 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) VNG2369c cluster03 -> 1fit00 6.4329169 124 / 79 conP: 0.237 CATH-ID: 3.30.428.10 Fragile histidine protein. Chain: null. Synonym: fhit, fragile histidi VNG2369c cluster04 -> 1pdnC1 7.6916990 68 / 79 conP: 0.424 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b VNG2369c cluster05 -> 1bhgA3 7.8545729 303 / 79 conP: 0.088 CATH-ID: 3.20.20.80 Beta-glucuronidase. Chain: a, b. Synonym: gus gene product. Engineered --end-- VNG2370c one-of-top-five-correct: 0.362891704395892 CThresh: 5.444911 75 best_is: cluster08 VNG2370c cluster00 -> 1ev0A0 6.7122912 58 / 81 conP: 0.321 CATH-ID: 3.30.1070.10 Mine. Chain: a, b. Fragment: mine topological specificity domain. Syno VNG2370c cluster01 -> 1ej4A0 7.8731355 179 / 81 conP: 0.188 CATH-ID: 3.30.760.10 Eukaryotic initiation factor 4e. Chain: a. Fragment: residues 28-217. VNG2370c cluster02 -> 1a9xA2 6.8741558 217 / 81 conP: 0.111 CATH-ID: 3.30.470.20 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG2370c cluster03 -> 1qj2C2 5.9636418 105 / 81 conP: 0.202 CATH-ID: 3.30.390.50 Carbon monoxide dehydrogenase. Chain: a, g. Carbon monoxide dehydrogen VNG2370c cluster04 -> 1vin02 7.2522201 113 / 81 conP: 0.256 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG2370c cluster08 -> 1di0A0 8.3820383 145 / 81 conP: 0.265 CATH-ID: 3.40.50.960 Lumazine synthase. Chain: a, b, c, d, e. Engineered: yes --end-- VNG23741 one-of-top-five-correct: 0.522943662307976 CThresh: 2.728095 100 best_is: cluster10 VNG23741 cluster00 -> 2u1a00 9.1384830 88 / 66 conP: 0.508 CATH-ID: 3.30.70.330 U1 small nuclear ribonucleoprotein a. Chain: null. Fragment: RNA bindi VNG23741 cluster01 -> 1dcoA0 8.4260954 99 / 66 conP: 0.428 CATH-ID: 3.30.70.200 Dcoh. Chain: a, b, c, d, e, f, g, h. Synonym: dimerization cofactor of VNG23741 cluster02 -> 1hbnC0 8.2899791 247 / 66 conP: 0.130 CATH-ID: 3.90.320.20 Methyl-coenzyme m reductase i alpha subunit. Chain: a, d. Methyl-coenz VNG23741 cluster03 -> 2if100 8.8548983 126 / 66 conP: 0.388 CATH-ID: 3.30.780.10 Eif1. Chain: null. Synonym: sui1. Engineered: yes. Other_details: n-te VNG23741 cluster04 -> 1dgnA0 8.2116939 89 / 66 conP: 0.438 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG23741 cluster10 -> 1ap800 9.2837013 213 / 66 conP: 0.222 CATH-ID: 3.30.760.10 Translation initiation factor eif4e. Chain: null. Engineered: yes --end-- VNG2376h one-of-top-five-correct: 0.273420306243886 CThresh: 8.544280 25 best_is: cluster00 VNG2376h cluster00 -> 1geo01 7.5371580 166 / 130 conP: 0.219 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG2376h cluster01 -> 1e8mA2 5.1867555 353 / 130 conP: 0.049 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG2376h cluster02 -> 1tys00 7.1200488 264 / 130 conP: 0.128 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG2376h cluster03 -> 1hz6A0 5.4980752 67 / 130 conP: 0.210 CATH-ID: 3.10.20.210 Protein l. Chain: a, b, c. Fragment: b1 domain. Synonym: ig kappa ligh VNG2376h cluster04 -> 2cblA3 6.0117153 86 / 130 conP: 0.218 CATH-ID: 3.30.505.10 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 --end-- VNG2379h one-of-top-five-correct: 0.234979513402619 CThresh: 6.893107 75 best_is: cluster16 VNG2379h cluster00 -> 1f3vA0 5.7305433 158 / 83 conP: 0.102 CATH-ID: 3.30.70.680 Tumor necrosis factor receptor type 1 associated death domain protein. VNG2379h cluster01 -> 1af500 5.1021125 126 / 83 conP: 0.110 CATH-ID: 3.10.28.10 I-crei. Chain: null. Synonym: DNA endonuclease i-crei. Engineered: yes VNG2379h cluster02 -> 1tys00 4.7020173 264 / 83 conP: 0.033 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG2379h cluster03 -> 4rhn00 6.2133439 115 / 83 conP: 0.158 CATH-ID: 3.30.428.10 Histidine triad nucleotide-binding protein. Chain: null. Synonym: hint VNG2379h cluster04 -> 1i9tA0 6.3023980 189 / 83 conP: 0.093 CATH-ID: 3.90.190.10 mRNA capping enzyme. Chain: a. Fragment: tpase domain (residues 1-210) VNG2379h cluster16 -> 1lehA1 7.3026360 151 / 83 conP: 0.159 CATH-ID: 3.40.192.10 Leucine dehydrogenase. Chain: a, b. Biological_unit: octamer --end-- VNG23810 one-of-top-five-correct: 0.366731833972336 CThresh: 5.795323 75 best_is: cluster06 VNG23810 cluster00 -> 1b4bA0 5.6736134 71 / 111 conP: 0.295 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c. Fragment: oligomerization domain, VNG23810 cluster01 -> 1bj700 6.3534690 150 / 111 conP: 0.236 CATH-ID: 2.40.128.20 D 2. Chain: null. Synonym: dander major allergen bda20, dermal allerge VNG23810 cluster02 -> 1jr8A 6.6041385 105 / 111 conP: 0.307 CATH-TRUNC VNG23810 cluster03 -> 1fbaA0 6.3039066 360 / 111 conP: 0.075 CATH-ID: 3.20.20.70 Fructose-1,6-bisphosphate aldolase VNG23810 cluster04 -> 2minB1 5.9741743 146 / 111 conP: 0.222 CATH-ID: 3.40.50.10 Nitrogenase molybdenum iron protein. Chain: a, b, c, d. Biological_uni VNG23810 cluster06 -> 1d6mA1 7.9032090 156 / 111 conP: 0.318 CATH-ID: 3.40.50.140 DNA topoisomerase iii. Chain: a. Engineered: yes --end-- VNG23811 one-of-top-five-correct: 0.283065520760396 CThresh: 2.992985 100 best_is: cluster10 VNG23811 cluster00 -> 1qgvA0 4.9548867 130 / 52 conP: 0.105 CATH-ID: 3.40.30.10 Spliceosomal protein u5-15kd. Chain: a. Fragment: full-length. Enginee VNG23811 cluster01 -> 1d0nA6 6.2363054 127 / 52 conP: 0.150 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG23811 cluster02 -> 1qgvA0 5.4092284 130 / 52 conP: 0.117 CATH-ID: 3.40.30.10 Spliceosomal protein u5-15kd. Chain: a. Fragment: full-length. Enginee VNG23811 cluster03 -> 1qgvA0 5.0848658 130 / 52 conP: 0.108 CATH-ID: 3.40.30.10 Spliceosomal protein u5-15kd. Chain: a. Fragment: full-length. Enginee VNG23811 cluster04 -> 1a6q01 5.5454416 294 / 52 conP: 0.015 CATH-ID: 3.60.40.10 Phosphatase 2c. Chain: null. Engineered: yes VNG23811 cluster10 -> 1j7kA 6.9271692 299 / 52 conP: 0.021 CATH-TRUNC --end-- VNG2385h one-of-top-five-correct: 0.327079482492874 CThresh: 4.394449 75 best_is: cluster01 VNG2385h cluster00 -> 1af702 7.3458234 194 / 57 conP: 0.085 CATH-ID: 3.40.50.150 Chemotaxis receptor methyltransferase cher. Chain: null. Engineered: y VNG2385h cluster01 -> 1ala01 8.0179857 73 / 57 conP: 0.333 CATH-ID: 1.10.220.10 Annexin v VNG2385h cluster02 -> 1ebmA3 5.5533908 126 / 57 conP: 0.114 CATH-ID: 1.10.340.10 8-oxoguanine DNA glycosylase. Chain: a. Fragment: core fragment (resid VNG2385h cluster03 -> 1qsaA2 7.3458234 70 / 57 conP: 0.299 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG2385h cluster04 -> 1aa7A1 6.8977153 79 / 57 conP: 0.252 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer --end-- VNG2386c one-of-top-five-correct: 0.734888647228259 CThresh: 3.686318 75 best_is: cluster03 VNG2386c cluster00 -> 1ga6A0 9.6634636 369 / 112 conP: 0.251 CATH-ID: 3.40.50.200 Serine-carboxyl proteinase. Chain: a. Synonym: pscp, pseudomonapepsin, VNG2386c cluster01 -> 1pxtA1 9.0193590 186 / 112 conP: 0.466 CATH-ID: 3.40.47.10 Peroxisomal 3-ketoacyl-coa thiolase VNG2386c cluster02 -> 1bd3A0 6.8281730 224 / 112 conP: 0.268 CATH-ID: 3.40.50.90 Uracil phosphoribosyltransferase. Chain: d, c, b, a. Synonym: uprtase. VNG2386c cluster03 -> 1dozA1 11.210545 166 / 112 conP: 0.650 CATH-ID: 3.40.50.1400 Ferrochelatase. Chain: a. Engineered: yes VNG2386c cluster04 -> 1hqkA 11.019528 154 / 112 conP: 0.655 NO-CATH --end-- VNG23960 one-of-top-five-correct: 0.421458976869656 CThresh: 7.588279 25 best_is: cluster18 VNG23960 cluster00 -> 2plc00 6.2863722 274 / 111 conP: 0.085 CATH-ID: 3.20.20.190 Phosphatidylinositol-specific phospholipasE C. Chain: null. Synonym: p VNG23960 cluster01 -> 1gai00 7.7687061 472 / 111 conP: 0.039 CATH-ID: 1.50.10.30 Glucoamylase-471. Chain: null. Fragment: residues 1-471. Synonym: gluc VNG23960 cluster02 -> 1nfn00 7.7687061 132 / 111 conP: 0.258 CATH-ID: 1.20.120.20 Apolipoprotein e3. Chain: null. Fragment: 22kd receptor binding domain VNG23960 cluster03 -> 1d1dA1 7.6190852 140 / 111 conP: 0.241 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG23960 cluster04 -> 1sesA1 7.6120262 102 / 111 conP: 0.287 CATH-ID: 1.20.15.10 Seryl-tRNA synthetase (serine-tRNA ligase) complexed with seryl-hydrox VNG23960 cluster18 -> 1rpo00 9.3445382 61 / 111 conP: 0.462 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid --end-- VNG23961 one-of-top-five-correct: 0.541575705203404 CThresh: 3.816237 75 best_is: cluster18 VNG23961 cluster00 -> 1eyvA0 6.0930756 131 / 71 conP: 0.195 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr VNG23961 cluster01 -> 3ygsP0 8.8973467 97 / 71 conP: 0.432 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: c. Fragment: caspase re VNG23961 cluster02 -> 1dnpA3 6.0930756 181 / 71 conP: 0.129 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG23961 cluster03 -> 1mroB1 6.5125378 147 / 71 conP: 0.189 CATH-ID: 3.30.70.470 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG23961 cluster04 -> 1bu2A1 6.9320001 112 / 71 conP: 0.271 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG23961 cluster18 -> 1volA1 9.8682356 97 / 71 conP: 0.501 CATH-ID: 1.10.472.10 Transcription factor iib. Chain: a. Fragment: residues 113 - 316. Engi --end-- VNG23962 one-of-top-five-correct: 0.37864853409962 CThresh: 6.250549 75 best_is: cluster08 VNG23962 cluster00 -> 1bia02 5.2858508 181 / 91 conP: 0.103 CATH-ID: 3.30.930.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG23962 cluster01 -> 1dik04 6.8839074 343 / 91 conP: 0.050 CATH-ID: 3.20.20.60 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG23962 cluster02 -> 1jfiA0 4.8826068 63 / 91 conP: 0.202 CATH-TRUNC VNG23962 cluster03 -> 1ytfD1 6.0451230 53 / 91 conP: 0.277 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG23962 cluster04 -> 1hlm00 5.8694495 158 / 91 conP: 0.139 CATH-ID: 1.10.490.10 Hemoglobin (cyano-met) (sea cucumber) VNG23962 cluster08 -> 1e7aA6 8.7046129 78 / 91 conP: 0.404 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG23963 one-of-top-five-correct: 0.475515512184193 CThresh: 2.995733 100 best_is: cluster00 VNG23963 cluster00 -> 1nal10 8.7259440 291 / 73 conP: 0.124 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 VNG23963 cluster01 -> 1juqA 6.2302039 148 / 73 conP: 0.213 CATH-TRUNC VNG23963 cluster02 -> 1ubsA0 7.5707574 257 / 73 conP: 0.123 CATH-ID: 3.20.20.90 Tryptophan synthase. Chain: a, b. Engineered: yes. Mutation: chain b, VNG23963 cluster03 -> 1b5tA0 7.8940306 275 / 73 conP: 0.115 CATH-ID: 3.20.20.220 Methylenetetrahydrofolate reductase. Chain: a, b, c. Engineered: yes VNG23963 cluster04 -> 1a4mA0 6.8541389 349 / 73 conP: 0.045 CATH-ID: 3.20.20.140 Adenosine deaminase. Chain: a, b, c, d. Synonym: ada. Engineered: yes --end-- VNG24040 one-of-top-five-correct: 0.689623398723893 CThresh: 8.370941 25 best_is: cluster12 VNG24040 cluster00 -> 1k40A 7.3231792 126 / 162 conP: 0.326 CATH-TRUNC VNG24040 cluster01 -> 1a9100 11.103628 79 / 162 conP: 0.638 CATH-ID: 1.20.20.10 F1fo atpase subunit c. Chain: null. Synonym: proteolipid, dccd-binding VNG24040 cluster02 -> 1joyA0 9.4443156 67 / 162 conP: 0.535 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG24040 cluster03 -> 1cxzB0 10.246854 86 / 162 conP: 0.572 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid VNG24040 cluster04 -> 1kmeA 9.0390670 227 / 162 conP: 0.339 CATH-TRUNC VNG24040 cluster12 -> 1nfn00 11.590975 132 / 162 conP: 0.617 CATH-ID: 1.20.120.20 Apolipoprotein e3. Chain: null. Fragment: 22kd receptor binding domain --end-- VNG24041 one-of-top-five-correct: 0.810914484578836 CThresh: 6.729278 75 best_is: cluster09 VNG24041 cluster00 -> 1a36A5 7.9369549 72 / 160 conP: 0.509 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG24041 cluster01 -> 1cxzB0 10.201000 86 / 160 conP: 0.652 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid VNG24041 cluster02 -> 1a36A5 10.443119 72 / 160 conP: 0.681 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG24041 cluster03 -> 1a36A5 8.7723429 72 / 160 conP: 0.569 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG24041 cluster04 -> 1a36A5 9.1900369 72 / 160 conP: 0.599 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG24041 cluster09 -> 1qsdA0 12.692236 102 / 160 conP: 0.782 CATH-ID: 1.20.1040.50 Beta-tubulin binding post-chaperonin cofactor. Chain: a, b. Fragment: --end-- VNG24042 one-of-top-five-correct: 0.298639352431726 CThresh: 6.721402 75 best_is: cluster19 VNG24042 cluster00 -> 1nkl00 6.1759971 78 / 88 conP: 0.220 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG24042 cluster01 -> 1e7aA2 7.2443913 90 / 88 conP: 0.259 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG24042 cluster02 -> 1f3mC2 6.1500725 189 / 88 conP: 0.104 CATH-ID: 1.10.510.10 Serine/threonine-protein kinase pak-alpha. Chain: a, b. Fragment: pak1 VNG24042 cluster03 -> 1ytfD1 5.5001509 53 / 88 conP: 0.221 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG24042 cluster04 -> 1jkw02 6.7692984 101 / 88 conP: 0.218 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG24042 cluster19 -> 1befA2 8.0050529 85 / 88 conP: 0.312 CATH-ID: 2.40.10.10 Dengue virus ns3 serine protease. Chain: a. Fragment: protease domain, --end-- VNG2408c one-of-top-five-correct: 0.636706001687366 CThresh: 5.429365 75 best_is: cluster00 VNG2408c cluster00 -> 2dri02 10.882558 146 / 106 conP: 0.541 CATH-ID: 3.40.50.2400 D-ribose-binding protein complexed with beta-d-ribose VNG2408c cluster01 -> 1brwA2 7.1686480 272 / 106 conP: 0.149 CATH-ID: 3.40.1030.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 VNG2408c cluster02 -> 1brwA2 7.9114300 272 / 106 conP: 0.179 CATH-ID: 3.40.1030.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 VNG2408c cluster03 -> 1dqsA1 10.221029 179 / 106 conP: 0.439 CATH-ID: 3.40.50.1970 3-dehydroquinate synthase. Chain: a, b. Fragment: n-terminal domain of VNG2408c cluster04 -> 1oaa00 7.2027445 259 / 106 conP: 0.162 CATH-ID: 3.40.50.720 Sepiapterin reductase. Chain: null. Engineered: yes. Biological_unit: --end-- VNG24110 one-of-top-five-correct: 0.26640916909803 CThresh: 6.303802 75 best_is: cluster13 VNG24110 cluster00 -> 1fjgB2 4.6993056 62 / 92 conP: 0.195 CATH-TRUNC VNG24110 cluster01 -> 1c5a00 6.4195216 65 / 92 conP: 0.280 CATH-ID: 1.20.91.20 Des-arg==74==-complement c5a VNG24110 cluster02 -> 1amp00 4.4850060 291 / 92 conP: 0.038 CATH-ID: 3.40.630.10 Aminopeptidase (aeromonas proteolytica) VNG24110 cluster03 -> 1e7aA4 5.6141254 86 / 92 conP: 0.208 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG24110 cluster04 -> 1ryp20 5.4544421 233 / 92 conP: 0.076 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG24110 cluster13 -> 1octC1 7.2889503 71 / 92 conP: 0.323 CATH-ID: 1.10.260.10 Oct-1 (pou domain) --end-- VNG2412h one-of-top-five-correct: 0.282346383035658 CThresh: 6.999797 30 best_is: cluster12 VNG2412h cluster00 -> 1a5902 5.9347365 108 / 91 conP: 0.170 CATH-ID: 1.10.230.10 Citrate synthase. Chain: null. Engineered: yes. Biological_unit: dimer VNG2412h cluster01 -> 1uaaA2 6.4533796 74 / 91 conP: 0.236 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG2412h cluster02 -> 1df4A0 5.3293367 57 / 91 conP: 0.203 CATH-ID: 1.20.15.180 HIV-1 envelope glycoprotein gp41. Chain: a. Fragment: residues 1 - 34 VNG2412h cluster03 -> 1bob03 7.7330147 54 / 91 conP: 0.343 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG2412h cluster04 -> 1f1zA2 6.3357028 99 / 91 conP: 0.198 CATH-ID: 1.10.10.10 Tnsa endonuclease. Chain: a, b. Synonym: transposase VNG2412h cluster12 -> 1aa7A2 7.8465464 78 / 91 conP: 0.309 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer --end-- VNG2415h one-of-top-five-correct: 0.512674646073174 CThresh: 6.999915 73 best_is: cluster00 VNG2415h cluster00 -> 1bucA3 10.584702 141 / 89 conP: 0.369 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG2415h cluster01 -> 2eiaA1 7.1002157 132 / 89 conP: 0.187 CATH-ID: 1.10.375.10 Eiav capsid protein p26. Chain: a, b. Engineered: yes VNG2415h cluster02 -> 1aj300 8.2753268 98 / 89 conP: 0.296 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: null. Fragment: 16th repeat, residues 1772 - 18 VNG2415h cluster03 -> 1do0A3 9.1270198 109 / 89 conP: 0.331 CATH-ID: 1.10.8.60 Heat shock locus u. Chain: a, b, c, d, e, f. Engineered: yes VNG2415h cluster04 -> 1volA1 6.8398449 97 / 89 conP: 0.219 CATH-ID: 1.10.472.10 Transcription factor iib. Chain: a. Fragment: residues 113 - 316. Engi --end-- VNG24170 one-of-top-five-correct: 0.632915543632859 CThresh: 3.312490 75 best_is: cluster14 VNG24170 cluster00 -> 1ecpA0 6.8927200 237 / 72 conP: 0.111 CATH-ID: 3.40.50.1580 Purine nucleoside phosphorylase. Chain: a, b, c, d, e, f. Engineered: VNG24170 cluster01 -> 1howA1 10.154871 91 / 72 conP: 0.570 CATH-ID: 3.30.200.20 Serine/threonine-protein kinase ymr216c. Chain: a. Fragment: sky1pdelt VNG24170 cluster02 -> 1asu00 7.3104139 162 / 72 conP: 0.226 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG24170 cluster03 -> 1bebA0 6.1577382 156 / 72 conP: 0.182 CATH-ID: 2.40.128.20 Beta-lactoglobulin. Chain: a, b. Biological_unit: predominantly dimeri VNG24170 cluster04 -> 1bcpB2 7.7281079 110 / 72 conP: 0.353 CATH-ID: 2.40.50.110 Pertussis toxin. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Ec: 2.4.2. VNG24170 cluster14 -> 1djrD0 10.651966 103 / 72 conP: 0.576 CATH-ID: 2.40.50.110 Heat-labile enterotoxin. Chain: d, e, f, g, h. Fragment: b pentamer. S --end-- VNG24190 one-of-top-five-correct: 0.392455242841867 CThresh: 7.315191 25 best_is: cluster11 VNG24190 cluster00 -> 1gtmA2 7.0523074 238 / 112 conP: 0.136 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a, b, c. Biological_unit: homohexamer VNG24190 cluster01 -> 1b71A1 5.7900101 145 / 112 conP: 0.164 CATH-ID: 1.20.120.190 Rubrerythrin. Chain: a VNG24190 cluster02 -> 1c17M0 6.6455742 142 / 112 conP: 0.203 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG24190 cluster03 -> 1ash00 6.2156263 147 / 112 conP: 0.179 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG24190 cluster04 -> 1jud02 7.4691377 75 / 112 conP: 0.330 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG24190 cluster11 -> 1k40A 8.8688199 126 / 112 conP: 0.349 NO-CATH --end-- VNG24225 one-of-top-five-correct: 0.31742453262214 CThresh: 6.987189 60 best_is: cluster06 VNG24225 cluster00 -> 1b3uA0 5.5963105 588 / 107 conP: 0.010 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG24225 cluster01 -> 1qnrA0 5.4750595 344 / 107 conP: 0.046 CATH-ID: 3.20.20.80 Endo-1,4-b-d-mannanase. Chain: a. Fragment: catalytic domain. Engineer VNG24225 cluster02 -> 1gdz00 5.0444304 151 / 107 conP: 0.131 CATH-ID: 1.10.375.10 Human immunodeficiency virus type 1 capsid protein. Chain: null. Fragm VNG24225 cluster03 -> 1a5902 5.1498176 108 / 107 conP: 0.171 CATH-ID: 1.10.230.10 Citrate synthase. Chain: null. Engineered: yes. Biological_unit: dimer VNG24225 cluster04 -> 1jhoA 6.7712072 346 / 107 conP: 0.065 CATH-TRUNC VNG24225 cluster06 -> 1h6kX0 7.9342756 77 / 107 conP: 0.361 CATH-ID: 3.30.70.330 Cbp80. Chain: a, b, c. Fragment: 80 kda nuclear cap binding protein . --end-- VNG2431c one-of-top-five-correct: 0.310097597884122 CThresh: 6.233032 75 best_is: cluster02 VNG2431c cluster00 -> 1bucA1 6.8879348 123 / 87 conP: 0.210 CATH-ID: 1.10.540.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG2431c cluster01 -> 1a0b00 6.9819943 117 / 87 conP: 0.223 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG2431c cluster02 -> 1tf4A1 7.9545061 454 / 87 conP: 0.025 CATH-ID: 1.50.10.30 T. Fusca endo/exo-cellulase e4 catalytic domain and cellulose-binding VNG2431c cluster03 -> 1ec5A0 6.6817172 48 / 87 conP: 0.314 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG2431c cluster04 -> 1agsA 7.0740222 221 / 87 conP: 0.113 NO-CATH --end-- VNG2432c one-of-top-five-correct: 0.0325176245543105 CThresh: 4.347036 75 best_is: --end-- VNG2440h one-of-top-five-correct: 0.187063886919776 CThresh: 5.942403 75 best_is: cluster01 VNG2440h cluster00 -> 1h9xA 6.4904859 526 / 61 conP: 0.001 NO-CATH VNG2440h cluster01 -> 1l1dA 6.5818281 142 / 61 conP: 0.103 NO-CATH VNG2440h cluster02 -> 1ifc00 6.2709434 131 / 61 conP: 0.107 CATH-ID: 2.40.128.20 Intestinal fatty acid binding protein (apo form 2) VNG2440h cluster03 -> 1d0qA0 5.5949335 102 / 61 conP: 0.120 CATH-ID: 3.90.580.10 DNA primase. Chain: a, b. Fragment: zinc-binding domain. Engineered: y VNG2440h cluster04 -> 1avdA0 5.8318584 123 / 61 conP: 0.103 CATH-ID: 2.40.128.30 Avidin complex with biotin --end-- VNG2442h one-of-top-five-correct: 0.262791952085892 CThresh: 3.023794 75 best_is: cluster08 VNG2442h cluster00 -> 1dfuP0 5.6037793 94 / 46 conP: 0.156 CATH-ID: 2.40.240.10 Ribosomal protein l25. Chain: p. Engineered: yes. Other_details: prote VNG2442h cluster01 -> 1rkd02 5.6037793 256 / 46 conP: 0.015 CATH-ID: 3.90.77.20 Ribokinase. Chain: null. Engineered: yes. Biological_unit: homodimer VNG2442h cluster02 -> 1b77A0 6.7979811 228 / 46 conP: 0.033 CATH-ID: 3.70.10.20 Sliding clamp. Chain: a, b, c. Synonym: gp45. Engineered: yes VNG2442h cluster03 -> 1mxa01 5.6037793 142 / 46 conP: 0.082 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met VNG2442h cluster04 -> 1auvA3 5.6037793 101 / 46 conP: 0.142 CATH-ID: 3.30.470.20 Synapsin ia. Chain: a, b. Fragment: residues 110 - 420. Engineered: ye VNG2442h cluster08 -> 1b24A2 6.7979811 74 / 46 conP: 0.261 CATH-ID: 3.10.28.10 I-dmoi. Chain: a. Engineered: yes. Biological_unit: monomer. Other_det --end-- VNG24441 one-of-top-five-correct: 0.326130038986335 CThresh: 4.397461 75 best_is: cluster08 VNG24441 cluster00 -> 1e42A2 5.2484452 116 / 82 conP: 0.195 CATH-ID: 3.30.310.10 Beta2-adaptin. Synonym: plasma membrane adaptor ha2/ap2 adaptin beta s VNG24441 cluster01 -> 3chy00 6.7358675 128 / 82 conP: 0.252 CATH-ID: 3.40.50.3000 Che Y VNG24441 cluster02 -> 1qqnA4 6.5469358 84 / 82 conP: 0.317 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG24441 cluster03 -> 1cgt03 5.5821243 86 / 82 conP: 0.256 CATH-ID: 2.60.40.450 Cyclodextrin glycosyltransferase VNG24441 cluster04 -> 1lte00 5.9327293 239 / 82 conP: 0.094 CATH-ID: 2.60.120.60 Lectin complex with lactose VNG24441 cluster08 -> 1gpmA1 7.4382738 198 / 82 conP: 0.185 CATH-ID: 3.40.50.880 Gmp synthetase. Chain: a, b, c, d. Synonym: xmp aminase. Engineered: y --end-- VNG2446h one-of-top-five-correct: 0.281524792818819 CThresh: 3.108716 75 best_is: cluster05 VNG2446h cluster00 -> 1aua02 6.7499816 83 / 51 conP: 0.259 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG2446h cluster01 -> 1aua02 6.7499816 83 / 51 conP: 0.259 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG2446h cluster02 -> 1dv0A0 4.7857781 45 / 51 conP: 0.250 CATH-ID: 1.10.8.10 DNA repair protein hhr23a. Chain: a. Fragment: uba domain (c-terminal VNG2446h cluster03 -> 1cr4A0 5.9089868 243 / 51 conP: 0.030 CATH-ID: 3.40.50.300 DNA primase/helicase. Chain: a. Fragment: helicase domain. Engineered: VNG2446h cluster04 -> 1c3uA3 5.1286056 82 / 51 conP: 0.181 CATH-ID: 1.10.164.30 Adenylosuccinate lyase. Chain: a, b. Engineered: yes VNG2446h cluster05 -> 1f3cA0 6.9816067 89 / 51 conP: 0.256 CATH-ID: 3.30.740.10 Dynein. Chain: a, b. Fragment: 8kda light chain. Synonym: protein inhi --end-- VNG2451h one-of-top-five-correct: 0.135547033654675 CThresh: 2.374314 100 best_is: cluster01 VNG2451h cluster00 -> 1pbwA0 3.7453166 184 / 34 conP: 0.011 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG2451h cluster01 -> 1a5t02 4.5284006 40 / 34 conP: 0.210 CATH-ID: 1.10.8.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG2451h cluster02 -> 1ngr00 4.2673726 85 / 34 conP: 0.089 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d VNG2451h cluster03 -> 1wdcC1 3.7453166 78 / 34 conP: 0.088 CATH-ID: 1.10.238.10 Scallop myosin. Chain: a, b, c. Fragment: proteolytic fragment, regula VNG2451h cluster04 -> 1aua02 4.2673726 83 / 34 conP: 0.092 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: --end-- VNG2454c one-of-top-five-correct: 0.327623126353442 CThresh: 7.600739 25 best_is: cluster16 VNG2454c cluster00 -> 1ffvB3 6.5916227 166 / 137 conP: 0.225 CATH-ID: 3.30.176.10 Cuts, iron-sulfur protein of carbon monoxide dehydrogenase. Chain: a, VNG2454c cluster01 -> 1jdpA 6.4554777 396 / 137 conP: 0.079 NO-CATH VNG2454c cluster02 -> 1sesA2 5.3512396 318 / 137 conP: 0.085 CATH-ID: 3.40.690.10 Seryl-tRNA synthetase (serine-tRNA ligase) complexed with seryl-hydrox VNG2454c cluster03 -> 1jsrA 5.7687799 324 / 137 conP: 0.093 NO-CATH VNG2454c cluster04 -> 1g93A 6.7988265 277 / 137 conP: 0.149 NO-CATH VNG2454c cluster16 -> 1hplA1 7.6571987 337 / 137 conP: 0.141 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) --end-- VNG2456c one-of-top-five-correct: 0.36995900870167 CThresh: 6.657166 75 best_is: cluster10 VNG2456c cluster00 -> 1ala01 6.8541389 73 / 91 conP: 0.274 CATH-ID: 1.10.220.10 Annexin v VNG2456c cluster01 -> 1aorA2 7.4257126 186 / 91 conP: 0.157 CATH-ID: 1.10.569.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri VNG2456c cluster02 -> 1bob03 5.7757781 54 / 91 conP: 0.243 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG2456c cluster03 -> 1qazA0 5.2142982 351 / 91 conP: 0.027 CATH-ID: 1.50.40.20 Alginate lyase a1-iii. Chain: a. Engineered: yes. Biological_unit: mon VNG2456c cluster04 -> 1bvsA3 6.4367926 44 / 91 conP: 0.295 CATH-ID: 1.10.8.10 Ruva. Chain: a, b, c, d, e, f, g, h. Engineered: yes. Biological_unit: VNG2456c cluster10 -> 1vin02 8.7874429 113 / 91 conP: 0.326 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O --end-- VNG24620 one-of-top-five-correct: 0.247185352145698 CThresh: 5.916493 75 best_is: cluster04 VNG24620 cluster00 -> 2lisA0 5.7168828 131 / 73 conP: 0.124 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG24620 cluster01 -> 2dpmA2 6.4215690 103 / 73 conP: 0.185 CATH-ID: 1.10.1020.10 Adenine-specific methyltransferase dpnii 1. Chain: a. Synonym: m.Dpnii VNG24620 cluster02 -> 2hmqA0 6.5408271 113 / 73 conP: 0.176 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG24620 cluster03 -> 1chmA1 6.0222255 155 / 73 conP: 0.110 CATH-ID: 3.40.350.10 Creatine amidinohydrolase VNG24620 cluster04 -> 1gtxA1 7.2700956 167 / 73 conP: 0.136 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. --end-- VNG2470c one-of-top-five-correct: 0.29469951954186 CThresh: 5.779311 75 best_is: cluster03 VNG2470c cluster00 -> 1fj2A0 6.1786852 229 / 101 conP: 0.127 CATH-ID: 3.40.50.950 Acyl protein thioesterase 1. Chain: a, b. Engineered: yes VNG2470c cluster01 -> 1gdhA2 5.7788299 184 / 101 conP: 0.150 CATH-ID: 3.40.50.720 D-glycerate dehydrogenase (apo form) VNG2470c cluster02 -> 1sbp01 5.6725557 151 / 101 conP: 0.177 CATH-ID: 3.40.190.10 Sulfate-binding protein VNG2470c cluster03 -> 1ede00 7.2300987 310 / 101 conP: 0.101 CATH-ID: 3.40.50.950 Haloalkane dehalogenase at ph 8.2 VNG2470c cluster04 -> 1amf01 5.2455760 119 / 101 conP: 0.192 CATH-ID: 3.40.190.10 Molybdate transport protein moda. Chain: null. Fragment: n-domain, c-d --end-- VNG24741 one-of-top-five-correct: 0.268382663193804 CThresh: 7.036419 25 best_is: cluster09 VNG24741 cluster00 -> 1b3mA2 5.5499812 195 / 112 conP: 0.125 CATH-ID: 3.30.9.10 Monomeric sarcosine oxidase. Chain: a, b. Engineered: yes VNG24741 cluster01 -> 1befA2 5.3163651 85 / 112 conP: 0.209 CATH-ID: 2.40.10.10 Dengue virus ns3 serine protease. Chain: a. Fragment: protease domain, VNG24741 cluster02 -> 1mdc00 5.8004969 131 / 112 conP: 0.186 CATH-ID: 2.40.128.20 Fatty acid binding protein (manduca sexta) (mfb2) VNG24741 cluster03 -> 191400 5.5499812 171 / 112 conP: 0.142 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG24741 cluster04 -> 1e1aA0 6.0977777 312 / 112 conP: 0.074 CATH-ID: 2.130.10.50 Diisopropylfluorophosphatase. Chain: a. Synonym: dfpase. Engineered: y VNG24741 cluster09 -> 1qniA1 7.1933707 451 / 112 conP: 0.044 CATH-ID: 2.130.10.20 Nitrous-oxide reductase. Chain: a, b, c, d, e, f --end-- VNG24750 one-of-top-five-correct: 0.293240958100161 CThresh: 5.672307 75 best_is: cluster07 VNG24750 cluster00 -> 1jse00 5.1583936 129 / 78 conP: 0.127 CATH-ID: 1.10.530.10 Lysozyme. Chain: null. Ec: 3.2.1.17 VNG24750 cluster01 -> 1quvA2 5.7644699 119 / 78 conP: 0.160 CATH-ID: 3.30.70.620 RNA-directed RNA polymerase. Chain: a. Fragment: residues 2420-2989. S VNG24750 cluster02 -> 1dqeA0 5.3993496 137 / 78 conP: 0.127 CATH-ID: 1.10.238.20 Pheromone-binding protein. Chain: a, b. Synonym: pbp. Engineered: yes VNG24750 cluster03 -> 1ahjB1 5.5624445 110 / 78 conP: 0.163 CATH-ID: 1.10.472.20 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het VNG24750 cluster04 -> 1elkA0 6.2632853 153 / 78 conP: 0.139 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG24750 cluster07 -> 1fz1F2 7.6860523 73 / 78 conP: 0.333 CATH-ID: 1.20.88.10 Methane monooxygenase component a, alpha chain. Chain: a, b. Synonym: --end-- VNG2477h one-of-top-five-correct: 0.134237635478888 CThresh: 2.442046 100 best_is: cluster02 VNG2477h cluster00 -> 1b25A2 4.5284006 178 / 34 conP: 0.015 CATH-ID: 1.10.569.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG2477h cluster01 -> 1aua02 4.2673726 83 / 34 conP: 0.091 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG2477h cluster02 -> 1aorA2 4.5284006 186 / 34 conP: 0.013 CATH-ID: 1.10.569.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri VNG2477h cluster03 -> 2yhx_ 3.7453166 457 / 34 conP: 0.000 NO-CATH VNG2477h cluster04 -> 1ezkA0 4.0063446 149 / 34 conP: 0.023 CATH-ID: 3.40.30.10 Tryparedoxin i. Chain: a. Engineered: yes. Other_details: c-terminal h --end-- VNG24832 one-of-top-five-correct: 0.42924927563172 CThresh: 4.500226 75 best_is: cluster17 VNG24832 cluster00 -> 1mhlC0 5.3658378 466 / 85 conP: 0.014 CATH-ID: 1.10.640.10 Myeloperoxidase. Chain: a, c, b, d. Other_details: isoform c VNG24832 cluster01 -> 1cx2A2 6.4386783 510 / 85 conP: 0.014 CATH-ID: 1.10.640.10 Cyclooxygenase-2. Chain: a, b, c, d. Synonym: prostaglandin synthase-2 VNG24832 cluster02 -> 1cx2A2 5.6442498 510 / 85 conP: 0.011 CATH-ID: 1.10.640.10 Cyclooxygenase-2. Chain: a, b, c, d. Synonym: prostaglandin synthase-2 VNG24832 cluster03 -> 1inp02 7.5325840 187 / 85 conP: 0.212 CATH-ID: 3.30.540.10 Inositol polyphosphate 1-phosphatase (1-ptase) (inositol-1,4-bisphosph VNG24832 cluster04 -> 1h7bA 7.5325840 534 / 85 conP: 0.015 CATH-TRUNC VNG24832 cluster17 -> 1cx2A2 8.6233566 510 / 85 conP: 0.025 CATH-ID: 1.10.640.10 Cyclooxygenase-2. Chain: a, b, c, d. Synonym: prostaglandin synthase-2 --end-- VNG24833 one-of-top-five-correct: 0.442189682553641 CThresh: 5.582743 75 best_is: cluster13 VNG24833 cluster00 -> 1l2qA 6.4019846 457 / 74 conP: 0.009 CATH-TRUNC VNG24833 cluster01 -> 1fjgT0 9.4496845 99 / 74 conP: 0.384 CATH-TRUNC VNG24833 cluster02 -> 1c3qA0 8.2661066 272 / 74 conP: 0.079 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG24833 cluster03 -> 1e7aA5 8.0589819 112 / 74 conP: 0.269 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG24833 cluster04 -> 1guxB0 8.6803559 141 / 74 conP: 0.251 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG24833 cluster13 -> 1ayx00 9.5088545 492 / 74 conP: 0.015 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes --end-- VNG24840 one-of-top-five-correct: 0.438934967919689 CThresh: 2.090386 100 best_is: cluster02 VNG24840 cluster00 -> 1alo02 7.3977721 119 / 56 conP: 0.279 CATH-ID: 1.10.150.120 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG24840 cluster01 -> 1jfiB0 5.8210601 135 / 56 conP: 0.167 CATH-TRUNC VNG24840 cluster02 -> 1alo02 8.2987504 119 / 56 conP: 0.334 CATH-ID: 1.10.150.120 Aldehyde oxidoreductase. Chain: null. Synonym: molybdenum iron sulfur VNG24840 cluster03 -> 1aoiD0 6.4967938 99 / 56 conP: 0.277 CATH-ID: 1.10.20.10 Histone h3. Chain: a, e. Engineered: yes. Histone h4. Chain: b, f. Eng VNG24840 cluster04 -> 1jud02 8.2987504 75 / 56 conP: 0.465 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG24841 one-of-top-five-correct: 0.322167888397817 CThresh: 9.424824 25 best_is: cluster15 VNG24841 cluster00 -> 1e2aA0 7.8441978 102 / 147 conP: 0.298 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia VNG24841 cluster01 -> 1dik04 5.5974316 343 / 147 conP: 0.066 CATH-ID: 3.20.20.60 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG24841 cluster02 -> 1f0xA1 5.5119637 100 / 147 conP: 0.179 CATH-ID: 3.30.70.610 D-lactate dehydrogenase. Chain: a, b. Synonym: dldh. Engineered: yes VNG24841 cluster03 -> 1mnmA 6.2400712 85 / 147 conP: 0.225 CATH-TRUNC VNG24841 cluster04 -> 1rlr03 4.9640059 299 / 147 conP: 0.067 CATH-ID: 3.90.244.10 Ribonucleotide reductase protein r1. Chain: null. Synonym: ribonucleos VNG24841 cluster15 -> 1aca00 8.1886483 86 / 147 conP: 0.336 CATH-ID: 1.20.80.10 Acyl-coenzyme a binding protein (acbp) complex with palmitoyl-coenzyme --end-- VNG24842 one-of-top-five-correct: 0.451807627378333 CThresh: 3.162912 75 best_is: cluster03 VNG24842 cluster00 -> 1qhwA0 5.6396380 300 / 72 conP: 0.047 CATH-ID: 3.60.21.10 Purple acid phosphatase. Chain: a. Synonym: tartrate-resistant acid ph VNG24842 cluster01 -> 1ddf00 7.5192609 127 / 72 conP: 0.311 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG24842 cluster02 -> 1c5200 6.6838730 131 / 72 conP: 0.254 CATH-ID: 1.10.1250.10 Cytochrome-c552. Chain: null. Other_details: oxidized state (fe+++) VNG24842 cluster03 -> 1ddf00 8.5634959 127 / 72 conP: 0.379 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG24842 cluster04 -> 1g88A0 6.0573320 221 / 72 conP: 0.106 CATH-ID: 2.60.200.10 Smad4. Chain: a, b, c. Fragment: smad4 active fragment. Synonym: dpc4. --end-- VNG24860 one-of-top-five-correct: 0.155562718527124 CThresh: 7.598314 25 best_is: cluster02 VNG24860 cluster00 -> 1mroB1 4.3468992 147 / 97 conP: 0.086 CATH-ID: 3.30.70.470 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG24860 cluster01 -> 1agrE2 5.4173033 80 / 97 conP: 0.171 CATH-ID: 1.10.167.10 Guanine nucleotide-binding protein g(i). Chain: a, d. Fragment: alpha- VNG24860 cluster02 -> 1ipiA 5.9041805 114 / 97 conP: 0.157 CATH-TRUNC VNG24860 cluster03 -> 1dik05 4.5374491 89 / 97 conP: 0.131 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG24860 cluster04 -> 1bg8A0 5.3041505 76 / 97 conP: 0.171 CATH-ID: 1.10.890.10 Hdea. Chain: a, b, c. Synonym: 10k-s protein, hypothetical protein a --end-- VNG24930 one-of-top-five-correct: 0.539025793416278 CThresh: 2.799897 100 best_is: cluster07 VNG24930 cluster00 -> 1kfiA 8.8370033 570 / 77 conP: 0.014 NO-CATH VNG24930 cluster01 -> 1kfiA 8.7528722 570 / 77 conP: 0.014 NO-CATH VNG24930 cluster02 -> 1i6wA0 7.1156790 179 / 77 conP: 0.234 CATH-ID: 3.40.50.950 Lipase a. Chain: a, b. Engineered: yes VNG24930 cluster03 -> 1d6jA0 6.5017316 177 / 77 conP: 0.206 CATH-ID: 3.40.50.300 Adenosine-5'phosphosulfate kinase. Chain: a, b. Synonym: aps kinase. E VNG24930 cluster04 -> 1kfiA 7.6833512 570 / 77 conP: 0.010 NO-CATH VNG24930 cluster07 -> 1kfiA 9.2425876 570 / 77 conP: 0.016 NO-CATH --end-- VNG24931 one-of-top-five-correct: 0.329697533961056 CThresh: 6.970930 27 best_is: cluster17 VNG24931 cluster00 -> 1jfgA 5.7679515 354 / 116 conP: 0.059 NO-CATH VNG24931 cluster01 -> 1gab00 5.9581160 53 / 116 conP: 0.291 CATH-ID: 1.10.8.40 Protein pab. Chain: null. Fragment: albumin-binding domain, residues 2 VNG24931 cluster02 -> 1eo0A0 5.1867445 77 / 116 conP: 0.221 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En VNG24931 cluster03 -> 1g6wA2 4.8825510 137 / 116 conP: 0.153 CATH-ID: 1.20.1050.10 Ure2 protein. Chain: a, b, c, d. Fragment: globular domain (residues 9 VNG24931 cluster04 -> 1b0pA6 5.7080785 385 / 116 conP: 0.049 CATH-ID: 3.40.50.970 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG24931 cluster17 -> 1c9bA2 7.8754898 106 / 116 conP: 0.341 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te --end-- VNG2495h one-of-top-five-correct: 0.229694673098648 CThresh: 6.028255 75 best_is: cluster04 VNG2495h cluster00 -> 1a81A1 5.5882565 108 / 81 conP: 0.163 CATH-ID: 3.30.505.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG2495h cluster01 -> 1fokA1 5.3590426 281 / 81 conP: 0.039 CATH-ID: 3.90.241.10 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG2495h cluster02 -> 1e7kA0 4.9559766 125 / 81 conP: 0.123 CATH-ID: 3.30.70.480 15.5 kd RNA binding protein. Synonym: nhp2/rs6 family protein yel026w VNG2495h cluster03 -> 1brwA3 5.8109547 67 / 81 conP: 0.228 CATH-ID: 1.20.970.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 VNG2495h cluster04 -> 1i9tA0 6.8748386 189 / 81 conP: 0.123 CATH-ID: 3.90.190.10 mRNA capping enzyme. Chain: a. Fragment: tpase domain (residues 1-210) --end-- VNG2498h one-of-top-five-correct: 0.249856534139082 CThresh: 8.374236 25 best_is: cluster01 VNG2498h cluster00 -> 1ybvA0 6.5272301 270 / 125 conP: 0.102 CATH-ID: 3.40.50.720 Trihydroxynaphthalene reductase. Chain: a, b. Synonym: naphthol reduct VNG2498h cluster01 -> 1glqA2 7.2398023 108 / 125 conP: 0.257 CATH-ID: 1.20.1050.10 Glutathione s-transferase yfyf (class pi) complexed with s-(p-nitroben VNG2498h cluster02 -> 1pmt02 5.5175502 107 / 125 conP: 0.175 CATH-ID: 1.20.1050.10 Glutathione transferase. Chain: null. Synonym: pmgst, gst b1-1. Engine VNG2498h cluster03 -> 1jgiA 5.1147006 628 / 125 conP: 0.010 NO-CATH VNG2498h cluster04 -> 1qgpA0 7.0476996 76 / 125 conP: 0.281 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d --end-- VNG25020 one-of-top-five-correct: 0.467177066476883 CThresh: 5.518637 75 best_is: cluster09 VNG25020 cluster00 -> 1gejA0 7.8960510 399 / 113 conP: 0.102 CATH-ID: 1.10.630.10 Cytochrome p450 55a1. Chain: a. Engineered: yes VNG25020 cluster01 -> 1e7aA3 7.4142452 92 / 113 conP: 0.398 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG25020 cluster02 -> 1gdtA1 7.0881186 98 / 113 conP: 0.367 CATH-ID: 3.40.50.1390 Gamma-delta resolvase. Chain: a, b. Synonym: gd resolvase. Engineered: VNG25020 cluster03 -> 1gejA0 6.0121340 399 / 113 conP: 0.062 CATH-ID: 1.10.630.10 Cytochrome p450 55a1. Chain: a. Engineered: yes VNG25020 cluster04 -> 1aa7A1 6.2300452 79 / 113 conP: 0.337 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG25020 cluster09 -> 1qsaA2 8.8676803 70 / 113 conP: 0.535 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein --end-- VNG25040 one-of-top-five-correct: 0.247894054222106 CThresh: 6.452650 75 best_is: cluster15 VNG25040 cluster00 -> 1fbl02 4.8595133 191 / 101 conP: 0.100 CATH-ID: 2.110.10.10 Fibroblast (interstitial) collagenase (mmp-1). Chain: null. Engineered VNG25040 cluster01 -> 1oacA1 5.0197936 80 / 101 conP: 0.201 CATH-ID: 3.30.457.10 Copper amine oxidase. Chain: a, b. Ec: 1.4.3.6 VNG25040 cluster02 -> 1utg00 5.9188440 70 / 101 conP: 0.259 CATH-ID: 1.10.210.10 Uteroglobin (oxidized) VNG25040 cluster03 -> 1yrnA0 5.4672991 49 / 101 conP: 0.262 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG25040 cluster04 -> 1i7uA 4.7344467 275 / 101 conP: 0.056 CATH-TRUNC VNG25040 cluster15 -> 1awcB0 6.8860932 153 / 101 conP: 0.206 CATH-ID: 1.25.40.20 Ga binding protein alpha. Chain: a. Fragment: ets domain plus 30 c-ter --end-- VNG2508c one-of-top-five-correct: 0.0812908504618156 CThresh: 13.624783 25 best_is: cluster00 VNG2508c cluster00 -> 1lfdA0 6.5159010 87 / 102 conP: 0.069 CATH-ID: 3.10.20.90 Ralgds. Chain: a, c. Fragment: ras-interacting domain, c-terminal doma VNG2508c cluster01 -> 1ngr00 3.6581787 85 / 102 conP: 0.032 CATH-ID: 1.10.533.10 P75 low affinity neurotrophin receptor. Chain: null. Fragment: death d VNG2508c cluster02 -> 1klyA 6.0117618 212 / 102 conP: 0.026 NO-CATH VNG2508c cluster03 -> 1e8lA0 3.9244375 129 / 102 conP: 0.026 CATH-ID: 1.10.530.10 Lysozyme. Chain: a. Engineered: yes --end-- VNG2510h one-of-top-five-correct: 0.458021843505467 CThresh: 4.437891 75 best_is: cluster19 VNG2510h cluster00 -> 1c9bA2 6.5793224 106 / 64 conP: 0.209 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG2510h cluster01 -> 1qqnA4 5.8168519 84 / 64 conP: 0.212 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG2510h cluster02 -> 1ddf00 6.5793224 127 / 64 conP: 0.173 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG2510h cluster03 -> 1aisB2 5.9301319 94 / 64 conP: 0.199 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG2510h cluster04 -> 1ahjA0 5.2809413 198 / 64 conP: 0.062 CATH-ID: 3.90.330.10 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het VNG2510h cluster19 -> 1guxB0 9.3924813 141 / 64 conP: 0.288 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer --end-- VNG2511h one-of-top-five-correct: 0.186819783552985 CThresh: 3.868289 75 best_is: cluster15 VNG2511h cluster00 -> 3crd00 4.8426663 100 / 42 conP: 0.086 CATH-ID: 1.10.533.10 Raidd. Chain: null. Fragment: card domain. Engineered: yes VNG2511h cluster01 -> 1enh00 6.0694368 54 / 42 conP: 0.224 CATH-ID: 1.10.10.60 Engrailed homeodomain VNG2511h cluster02 -> 1e25A0 4.8426663 270 / 42 conP: 0.006 CATH-ID: 3.40.710.10 Extended-spectrum beta-lactamase per-1. Chain: a. Engineered: yes. Mut VNG2511h cluster03 -> 1c5a00 4.9243115 65 / 42 conP: 0.147 CATH-ID: 1.20.91.20 Des-arg==74==-complement c5a VNG2511h cluster04 -> 1vdeA3 5.5787286 109 / 42 conP: 0.091 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes VNG2511h cluster15 -> 1a1700 6.0694368 159 / 42 conP: 0.048 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein --end-- VNG2515h one-of-top-five-correct: 0.243662060693619 CThresh: 6.990220 33 best_is: cluster00 VNG2515h cluster00 -> 1b3jA1 7.4317139 170 / 85 conP: 0.146 CATH-ID: 3.30.500.10 Mhc class i homolog mic-a. Chain: a. Fragment: extracellular domain, r VNG2515h cluster01 -> 1hpwA0 5.6763668 129 / 85 conP: 0.127 CATH-ID: 3.30.700.10 Fimbrial protein. Chain: a. Fragment: pilin (residues 29-150). Synonym VNG2515h cluster02 -> 1aj8A2 5.2856856 98 / 85 conP: 0.143 CATH-ID: 1.10.230.10 Citrate synthase. Chain: a, b. Engineered: yes. Biological_unit: dimer VNG2515h cluster03 -> 1uox00 5.0484285 295 / 85 conP: 0.030 CATH-ID: 3.10.270.10 Urate oxidase. Chain: null. Synonym: uricase. Biological_unit: tetrame VNG2515h cluster04 -> 2sli02 6.4386783 383 / 85 conP: 0.022 CATH-ID: 2.120.10.10 Intramolecular trans-sialidase. Chain: null. Fragment: devoid of n-ter --end-- VNG2523h one-of-top-five-correct: 0.385649813042646 CThresh: 7.917092 25 best_is: cluster03 VNG2523h cluster00 -> 1qhwA0 7.9209001 300 / 133 conP: 0.157 CATH-ID: 3.60.21.10 Purple acid phosphatase. Chain: a. Synonym: tartrate-resistant acid ph VNG2523h cluster01 -> 1byuA0 7.6154206 202 / 133 conP: 0.222 CATH-ID: 3.40.50.300 Gtp-binding protein ran. Chain: a, b. Fragment: all. Synonym: tc4. Eng VNG2523h cluster02 -> 1a4iA2 7.4919194 89 / 133 conP: 0.333 CATH-ID: 3.40.50.2050 Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyc VNG2523h cluster03 -> 1cbzA1 8.5852280 315 / 133 conP: 0.172 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Synonym: aldh. Engineered: VNG2523h cluster04 -> 1hqkA 7.0394481 154 / 133 conP: 0.237 NO-CATH --end-- VNG25290 one-of-top-five-correct: 0.60266446493819 CThresh: 4.157590 75 best_is: cluster09 VNG25290 cluster00 -> 1pdnC1 6.8417742 68 / 86 conP: 0.392 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b VNG25290 cluster01 -> 1fseA0 5.6025348 67 / 86 conP: 0.313 CATH-ID: 1.10.10.10 Gere. Chain: a, b, c, d, e, f. Engineered: yes VNG25290 cluster02 -> 1bw6A0 6.7220384 56 / 86 conP: 0.407 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer VNG25290 cluster03 -> 1enh00 7.5053070 54 / 86 conP: 0.467 CATH-ID: 1.10.10.60 Engrailed homeodomain VNG25290 cluster04 -> 1bob03 7.2775994 54 / 86 conP: 0.450 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG25290 cluster09 -> 1qhaA2 10.365581 261 / 86 conP: 0.270 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit --end-- VNG25291 one-of-top-five-correct: 0.308153649605943 CThresh: 6.833134 75 best_is: cluster13 VNG25291 cluster00 -> 1qqnA4 7.0752890 84 / 100 conP: 0.286 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG25291 cluster01 -> 1b25A3 7.0705950 213 / 100 conP: 0.139 CATH-ID: 1.10.599.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG25291 cluster02 -> 1b3qA2 6.9116830 174 / 100 conP: 0.169 CATH-ID: 3.30.565.20 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG25291 cluster03 -> 1hw7A 6.7700242 229 / 100 conP: 0.117 CATH-TRUNC VNG25291 cluster04 -> 1atlA0 5.3812085 200 / 100 conP: 0.098 CATH-ID: 3.40.390.10 Atrolysin c. Chain: a, b, c, d. Synonym: hemorrhagic toxin c, form d. VNG25291 cluster13 -> 1jjcA0 7.9057253 266 / 100 conP: 0.125 CATH-ID: 3.40.690.10 Phenylalanyl-tRNA synthetase alpha chain. Chain: a. Fragment: alpha ch --end-- VNG25292 one-of-top-five-correct: 0.620722986767142 CThresh: 5.940866 75 best_is: cluster04 VNG25292 cluster00 -> 1knpA 7.5866272 529 / 125 conP: 0.059 CATH-TRUNC VNG25292 cluster01 -> 1a9100 9.0729687 79 / 125 conP: 0.544 CATH-ID: 1.20.20.10 F1fo atpase subunit c. Chain: null. Synonym: proteolipid, dccd-binding VNG25292 cluster02 -> 1be3H0 6.3629255 64 / 125 conP: 0.373 CATH-ID: 1.10.287.20 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG25292 cluster03 -> 1by1A0 8.6460243 209 / 125 conP: 0.338 CATH-ID: 1.20.900.10 Pix. Chain: a. Fragment: dbl homology domain. Engineered: yes. Biologi VNG25292 cluster04 -> 1a9100 10.494430 79 / 125 conP: 0.643 CATH-ID: 1.20.20.10 F1fo atpase subunit c. Chain: null. Synonym: proteolipid, dccd-binding --end-- VNG25311 one-of-top-five-correct: 0.539608120448524 CThresh: 2.553461 100 best_is: cluster04 VNG25311 cluster00 -> 1knyA2 8.3860576 128 / 76 conP: 0.420 CATH-ID: 1.20.30.20 Kanamycin nucleotidyltransferase. Chain: a, b. Synonym: kntase. Engine VNG25311 cluster01 -> 1dlc01 7.8619845 229 / 76 conP: 0.197 CATH-ID: 1.20.190.10 Delta-endotoxin cryiiia (bt13) VNG25311 cluster02 -> 1knyA2 7.0476996 128 / 76 conP: 0.329 CATH-ID: 1.20.30.20 Kanamycin nucleotidyltransferase. Chain: a, b. Synonym: kntase. Engine VNG25311 cluster03 -> 1chuA3 7.7171160 102 / 76 conP: 0.431 CATH-ID: 1.20.1040.60 L-aspartate oxidase. Chain: a. Engineered: yes. Biological_unit: homod VNG25311 cluster04 -> 1gejA0 9.1600130 399 / 76 conP: 0.069 CATH-ID: 1.10.630.10 Cytochrome p450 55a1. Chain: a. Engineered: yes --end-- VNG2532h one-of-top-five-correct: 0.425511299030829 CThresh: 8.002860 25 best_is: cluster03 VNG2532h cluster00 -> 1ctf00 7.0542554 68 / 118 conP: 0.293 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG2532h cluster01 -> 1ptvA0 6.3787739 297 / 118 conP: 0.081 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase 1b. Chain: a. Engineered: yes. Mutation: VNG2532h cluster02 -> 1ytfB0 5.8426196 46 / 118 conP: 0.250 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG2532h cluster03 -> 1guxB0 9.4186005 141 / 118 conP: 0.348 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG2532h cluster04 -> 1dluA1 6.0842688 203 / 118 conP: 0.124 CATH-ID: 3.40.47.10 Biosynthetic thiolase. Chain: a, b, c, d. Engineered: yes --end-- VNG25411 one-of-top-five-correct: 0.391688630079915 CThresh: 4.785210 75 best_is: cluster09 VNG25411 cluster00 -> 1kuvA 7.4780739 166 / 73 conP: 0.179 NO-CATH VNG25411 cluster01 -> 1mdl02 7.0621172 230 / 73 conP: 0.095 CATH-ID: 3.20.20.120 Mandelate racemase. Chain: null. Engineered: yes. Mutation: k166r VNG25411 cluster02 -> 1iw2A 6.8541389 163 / 73 conP: 0.158 NO-CATH VNG25411 cluster03 -> 1a1700 6.4381822 159 / 73 conP: 0.147 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein VNG25411 cluster04 -> 1e4fT4 7.6860523 89 / 73 conP: 0.326 CATH-ID: 3.30.420.70 Cell division protein ftsa. Chain: t. Engineered: yes VNG25411 cluster09 -> 1ff9A1 8.6006878 169 / 73 conP: 0.226 CATH-ID: 3.40.50.720 Saccharopine reductase. Chain: a. Engineered: yes --end-- VNG2556h one-of-top-five-correct: 0.321033994439498 CThresh: 9.815559 25 best_is: cluster10 VNG2556h cluster00 -> 1bzkA0 5.0880204 42 / 135 conP: 0.175 CATH-ID: 1.20.58.30 Band 3 anion transport protein. Chain: a. Fragment: c-terminal cytopla VNG2556h cluster01 -> 1bgvA3 5.7150714 76 / 135 conP: 0.175 CATH-ID: 1.10.285.10 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer VNG2556h cluster02 -> 1d3yA1 4.8346889 71 / 135 conP: 0.145 CATH-ID: 1.10.10.10 DNA topoisomerase vi a subunit. Chain: a, b. Fragment: DNA binding cor VNG2556h cluster03 -> 1e7aA5 8.5127309 112 / 135 conP: 0.283 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG2556h cluster04 -> 1ec5A0 5.5025069 48 / 135 conP: 0.188 CATH-ID: 1.20.15.30 Four-helix bundle model. Chain: a, b, c. Engineered: yes. Other_detail VNG2556h cluster10 -> 1dkxA2 8.6248678 80 / 135 conP: 0.325 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su --end-- VNG25732 one-of-top-five-correct: 0.250469684777451 CThresh: 7.087734 25 best_is: cluster01 VNG25732 cluster00 -> 1jf7A 6.6373962 281 / 105 conP: 0.087 CATH-TRUNC VNG25732 cluster01 -> 1iw2A 7.1207165 163 / 105 conP: 0.194 CATH-TRUNC VNG25732 cluster02 -> 1g4wR0 5.7062288 341 / 105 conP: 0.047 CATH-ID: 3.90.190.10 Protein tyrosine phosphatase sptp. Chain: r. Fragment: sptp residues 1 VNG25732 cluster03 -> 1kkeA 6.4511627 206 / 105 conP: 0.130 CATH-TRUNC VNG25732 cluster04 -> 1qtsA2 5.6331303 113 / 105 conP: 0.179 CATH-ID: 3.30.310.30 Ap-2 clathrin adaptor alpha subunit (alpha- adaptin c). Chain: a. Frag --end-- VNG2576h one-of-top-five-correct: 0.258558568929341 CThresh: 7.955191 25 best_is: cluster07 VNG2576h cluster00 -> 1qsaA2 5.2869505 70 / 118 conP: 0.200 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG2576h cluster01 -> 1qhaA2 4.6550698 261 / 118 conP: 0.063 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG2576h cluster02 -> 1ba500 4.8132034 53 / 118 conP: 0.194 CATH-ID: 1.10.10.60 Htrf1. Chain: null. Fragment: DNA-binding domain. Synonym: telomeric r VNG2576h cluster03 -> 1cby00 6.3761965 227 / 118 conP: 0.118 CATH-ID: 3.40.198.10 Delta-endotoxin cytb. Chain: null. Engineered: yes VNG2576h cluster04 -> 1qsaA2 5.9188440 70 / 118 conP: 0.230 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG2576h cluster07 -> 1dowA 7.3348179 200 / 118 conP: 0.172 NO-CATH --end-- VNG2577c one-of-top-five-correct: 0.552877614474012 CThresh: 6.931205 60 best_is: cluster19 VNG2577c cluster00 -> 1d5aA5 7.9607224 54 / 139 conP: 0.475 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG2577c cluster01 -> 1grj01 7.8518573 74 / 139 conP: 0.442 CATH-ID: 1.20.15.150 Grea transcript cleavage factor from escherichia coli VNG2577c cluster02 -> 1cb5A 8.4678220 453 / 139 conP: 0.123 NO-CATH VNG2577c cluster03 -> 1kmeA 7.1582313 227 / 139 conP: 0.231 NO-CATH VNG2577c cluster04 -> 1uaaA2 6.6091093 74 / 139 conP: 0.356 CATH-ID: 1.10.10.160 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG2577c cluster19 -> 1c17M0 9.8573973 142 / 139 conP: 0.501 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng --end-- VNG2581h one-of-top-five-correct: 0.588754968316935 CThresh: 1.808713 100 best_is: cluster06 VNG2581h cluster00 -> 1fvqA0 7.2742744 72 / 63 conP: 0.453 CATH-ID: 3.30.70.100 Copper-transporting atpase. Chain: a. Fragment: ccc2a domain. Engineer VNG2581h cluster01 -> 1fvqA0 8.5788204 72 / 63 conP: 0.547 CATH-ID: 3.30.70.100 Copper-transporting atpase. Chain: a. Fragment: ccc2a domain. Engineer VNG2581h cluster02 -> 1fj7A0 7.7891328 101 / 63 conP: 0.411 CATH-ID: 3.30.70.330 Nucleolin rbd1. Chain: a. Synonym: protein c23. Engineered: yes VNG2581h cluster03 -> 1fj7A0 8.7962447 101 / 63 conP: 0.483 CATH-ID: 3.30.70.330 Nucleolin rbd1. Chain: a. Synonym: protein c23. Engineered: yes VNG2581h cluster04 -> 1fvqA0 8.3613961 72 / 63 conP: 0.532 CATH-ID: 3.30.70.100 Copper-transporting atpase. Chain: a. Fragment: ccc2a domain. Engineer VNG2581h cluster06 -> 1afi00 9.6659421 72 / 63 conP: 0.623 CATH-ID: 3.30.70.100 Merp. Chain: null. Synonym: mercuric transport protein. Engineered: me --end-- VNG2582h one-of-top-five-correct: 0.439247587669533 CThresh: 7.389236 25 best_is: cluster11 VNG2582h cluster00 -> 1dp4A2 7.9154800 210 / 119 conP: 0.211 CATH-ID: 3.40.50.9700 Atrial natriuretic peptide receptor a. Chain: a, c. Fragment: hormone VNG2582h cluster01 -> 1yrgA0 5.9437854 343 / 119 conP: 0.065 CATH-ID: 3.80.10.10 Gtpase-activating protein rna1_schpo. Chain: a, b. Synonym: rna1p. Ran VNG2582h cluster02 -> 1egzA0 6.8400102 291 / 119 conP: 0.109 CATH-ID: 3.20.20.80 Endoglucanase z. Chain: a, b, c. Fragment: catalytic domain. Synonym: VNG2582h cluster03 -> 1pvdA1 9.1127423 179 / 119 conP: 0.312 CATH-ID: 3.40.50.970 Pyruvate decarboxylase (pdc) VNG2582h cluster04 -> 1qrrA0 6.4196030 390 / 119 conP: 0.057 CATH-ID: 3.40.50.720 Sulfolipid biosynthesis (sqd1) protein. Chain: a. Engineered: yes VNG2582h cluster11 -> 1c2500 9.2707739 161 / 119 conP: 0.346 CATH-ID: 3.40.250.10 Cdc25a. Chain: null. Fragment: catalytic domain. Synonym: m-phase indu --end-- VNG2584c one-of-top-five-correct: 0.374432013361159 CThresh: 4.515685 75 best_is: cluster17 VNG2584c cluster00 -> 1f08A0 5.0947720 148 / 96 conP: 0.185 CATH-ID: 3.30.70.750 Replication protein e1. Chain: a, b. Fragment: DNA-binding domain. Eng VNG2584c cluster01 -> 1dxxA1 5.7066635 113 / 96 conP: 0.259 CATH-ID: 1.10.418.10 Dystrophin. Chain: a, b, c, d. Fragment: actin-binding. Engineered: ye VNG2584c cluster02 -> 1d1rA0 6.6969684 83 / 96 conP: 0.367 CATH-ID: 3.30.780.10 Hypothetical 11.4 kd protein ycih in pyrf-osmb intergenic region. Chai VNG2584c cluster03 -> 1b4bA0 4.8720553 71 / 96 conP: 0.272 CATH-ID: 3.30.70.220 Arginine repressor. Chain: a, b, c. Fragment: oligomerization domain, VNG2584c cluster04 -> 1dg3A2 5.3542454 240 / 96 conP: 0.111 CATH-ID: 3.40.50.300 Interferon-induced guanylate-binding protein 1. Chain: a. Fragment: fu VNG2584c cluster17 -> 1bpb02 7.7548118 114 / 96 conP: 0.385 CATH-ID: 3.30.460.10 DNA polymerase beta (beta polymerase) (apo, 31kd domain) --end-- VNG2585h one-of-top-five-correct: 0.467448538082577 CThresh: 3.341595 75 best_is: cluster06 VNG2585h cluster00 -> 1cpo00 7.8298290 298 / 65 conP: 0.059 CATH-ID: 1.10.489.10 Chloroperoxidase. Chain: null. Synonym: cpo, clp. Ec: 1.11.1.10 VNG2585h cluster01 -> 1cpo00 7.8298290 298 / 65 conP: 0.059 CATH-ID: 1.10.489.10 Chloroperoxidase. Chain: null. Synonym: cpo, clp. Ec: 1.11.1.10 VNG2585h cluster02 -> 1fjgT0 7.6144395 99 / 65 conP: 0.335 CATH-TRUNC VNG2585h cluster03 -> 4crxA2 7.6144395 111 / 65 conP: 0.306 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG2585h cluster04 -> 1hy1A3 7.3545542 72 / 65 conP: 0.384 CATH-ID: 1.10.40.30 Delta crystallin ii. Chain: a, b, c, d. Synonym: delta-2-crystallin, a VNG2585h cluster06 -> 1dkxA2 8.9763336 80 / 65 conP: 0.477 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su --end-- VNG25891 one-of-top-five-correct: 0.22845954116206 CThresh: 4.096620 75 best_is: cluster11 VNG25891 cluster00 -> 1ryp20 6.3768078 233 / 54 conP: 0.038 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG25891 cluster01 -> 1ryp20 6.2252623 233 / 54 conP: 0.036 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG25891 cluster02 -> 1cbf02 5.0005227 121 / 54 conP: 0.101 CATH-ID: 3.30.950.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m VNG25891 cluster03 -> 1ryp20 5.9113534 233 / 54 conP: 0.033 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG25891 cluster04 -> 2pldA0 6.1390610 105 / 54 conP: 0.161 CATH-ID: 3.30.505.10 PhospholipasE C-gamma-1 (c-terminal sh2 domain comprising residues 663 VNG25891 cluster11 -> 4proC1 6.5944764 79 / 54 conP: 0.234 CATH-ID: 3.30.300.50 Alpha-lytic protease. Chain: a, b, c, d. Fragment: chain a, b, mature --end-- VNG25911 one-of-top-five-correct: 0.525737146060481 CThresh: 3.973517 75 best_is: cluster01 VNG25911 cluster00 -> 1dljA1 7.8748136 204 / 95 conP: 0.271 CATH-ID: 3.40.50.720 Udp-glucose dehydrogenase. Chain: a. Engineered: yes. Mutation: yes VNG25911 cluster01 -> 1dljA1 9.2188337 204 / 95 conP: 0.354 CATH-ID: 3.40.50.720 Udp-glucose dehydrogenase. Chain: a. Engineered: yes. Mutation: yes VNG25911 cluster02 -> 3rubL1 7.2320817 122 / 95 conP: 0.361 CATH-ID: 3.30.70.150 Ribulose 1,5-bisphosphate carboxylase(slash)oxygenase (form III ) VNG25911 cluster03 -> 1ars02 8.9219619 271 / 95 conP: 0.235 CATH-ID: 3.40.640.10 Aspartate aminotransferase complexed with pyridoxal-5'-phosphate VNG25911 cluster04 -> 1dljA1 6.9147992 204 / 95 conP: 0.220 CATH-ID: 3.40.50.720 Udp-glucose dehydrogenase. Chain: a. Engineered: yes. Mutation: yes --end-- VNG2593h one-of-top-five-correct: 0.243930896494851 CThresh: 7.248456 25 best_is: cluster03 VNG2593h cluster00 -> 1bxgB1 5.3912265 131 / 105 conP: 0.149 CATH-ID: 3.40.192.10 Phenylalanine dehydrogenase. Chain: a, b. Engineered: yes. Biological_ VNG2593h cluster01 -> 1hlrA 5.8924623 907 / 105 conP: 0.001 NO-CATH VNG2593h cluster02 -> 1bob03 6.1390610 54 / 105 conP: 0.266 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes VNG2593h cluster03 -> 1dqaA3 7.0974106 117 / 105 conP: 0.239 CATH-ID: 3.30.70.420 Hmg-coa reductase. Chain: a, b, c, d. Fragment: catalytic portion. Eng VNG2593h cluster04 -> 1octC1 7.0033796 71 / 105 conP: 0.293 CATH-ID: 1.10.260.10 Oct-1 (pou domain) --end-- VNG2594c one-of-top-five-correct: 0.449823471872902 CThresh: 6.941260 38 best_is: cluster12 VNG2594c cluster00 -> 1bucA3 7.5368475 141 / 116 conP: 0.277 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG2594c cluster01 -> 1gkxA 6.9115396 308 / 116 conP: 0.104 NO-CATH VNG2594c cluster02 -> 1qgkA 6.5502387 876 / 116 conP: 0.003 NO-CATH VNG2594c cluster03 -> 1tgoA5 8.6929885 178 / 116 conP: 0.299 CATH-ID: 3.90.710.10 Thermostable b DNA polymerase. Chain: a. Engineered: yes VNG2594c cluster04 -> 1cii03 6.7308892 157 / 116 conP: 0.216 CATH-ID: 1.10.490.30 Colicin ia. Chain: null. Engineered: yes. Biological_unit: monomer VNG2594c cluster12 -> 1e2aA0 9.2531793 102 / 116 conP: 0.443 CATH-ID: 1.20.1040.30 Enzyme iia. Chain: a, b, c. Synonym: enzyme iii, lactose-specific iia --end-- VNG25950 one-of-top-five-correct: 0.571026133849967 CThresh: 5.023200 75 best_is: cluster05 VNG25950 cluster00 -> 1e7aA2 8.6895590 90 / 130 conP: 0.566 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG25950 cluster01 -> 1e7aA2 8.0454531 90 / 130 conP: 0.520 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG25950 cluster02 -> 153l00 8.5869041 185 / 130 conP: 0.432 CATH-ID: 1.10.530.10 Lysozyme VNG25950 cluster03 -> 1dowA 8.1667928 200 / 130 conP: 0.383 CATH-TRUNC VNG25950 cluster04 -> 1itf00 8.7954758 165 / 130 conP: 0.473 CATH-ID: 1.20.120.210 Interferon alpha-2a. Chain: null. Engineered: yes. Biological_unit: mo VNG25950 cluster05 -> 1cpy02 9.3988839 72 / 130 conP: 0.638 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a --end-- VNG2599h one-of-top-five-correct: 0.290186699440804 CThresh: 3.290536 75 best_is: cluster03 VNG2599h cluster00 -> 1smlA0 5.8653408 266 / 52 conP: 0.022 CATH-ID: 3.60.15.10 Penicillinase. Chain: a. Engineered: yes. Biological_unit: tetramer VNG2599h cluster01 -> 1ck2A0 5.3151537 104 / 52 conP: 0.147 CATH-ID: 3.30.70.480 60s ribosomal protein l30. Chain: a. Synonym: rl30_yeast. Engineered: VNG2599h cluster02 -> 1dz1A0 6.5450824 70 / 52 conP: 0.279 CATH-ID: 2.40.50.40 Modifier 1 protein. Chain: a, b. Fragment: shadow chromo domain, resid VNG2599h cluster03 -> 1dcoA0 7.1574571 99 / 52 conP: 0.238 CATH-ID: 3.30.70.200 Dcoh. Chain: a, b, c, d, e, f, g, h. Synonym: dimerization cofactor of VNG2599h cluster04 -> 1gtxA1 6.4665934 167 / 52 conP: 0.093 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. --end-- VNG2603h one-of-top-five-correct: 0.276860218051247 CThresh: 6.771806 75 best_is: cluster14 VNG2603h cluster00 -> 1d2sA0 4.9823960 170 / 113 conP: 0.132 CATH-ID: 2.60.120.60 Sex hormone-binding globulin. Chain: a. Fragment: residues 1 to 205. S VNG2603h cluster01 -> 1bqhG0 5.1686377 122 / 113 conP: 0.178 CATH-ID: 2.60.40.10 H-2 class i histocompatibility antigen. Chain: a, d. Fragment: alpha c VNG2603h cluster02 -> 2baa01 5.1644994 185 / 113 conP: 0.128 CATH-ID: 1.10.530.10 Endochitinase (26 kd). Chain: null. Other_details: 26 kd VNG2603h cluster03 -> 2bbkH0 6.9855338 355 / 113 conP: 0.079 CATH-ID: 2.130.10.10 Methylamine dehydrogenase (madh) VNG2603h cluster04 -> 1lgr01 5.6734656 336 / 113 conP: 0.062 CATH-ID: 3.90.269.10 Glutamine synthetase complexed with amp VNG2603h cluster14 -> 1dpe01 7.1676373 169 / 113 conP: 0.223 CATH-ID: 3.90.76.10 Dipeptide-binding protein. Chain: null. Synonym: dipeptide permease --end-- VNG26110 one-of-top-five-correct: 0.708457841216744 CThresh: 4.691220 75 best_is: cluster03 VNG26110 cluster00 -> 1dxfA0 7.4783512 251 / 96 conP: 0.170 CATH-ID: 3.20.20.60 2-dehydro-3-deoxy-galactarate aldolase. Chain: a, b. Ec: 4.1.2.20 VNG26110 cluster01 -> 1d6jA0 7.7548118 177 / 96 conP: 0.276 CATH-ID: 3.40.50.300 Adenosine-5'phosphosulfate kinase. Chain: a, b. Synonym: aps kinase. E VNG26110 cluster02 -> 1bmtA2 6.6939867 158 / 96 conP: 0.244 CATH-ID: 3.40.50.280 Methionine synthase (b12-binding domains) VNG26110 cluster03 -> 1bmtA2 11.670169 158 / 96 conP: 0.575 CATH-ID: 3.40.50.280 Methionine synthase (b12-binding domains) VNG26110 cluster04 -> 3pmgA1 5.3542454 197 / 96 conP: 0.141 CATH-ID: 3.40.460.10 Alpha-d-glucose-1,6-bisphosphate. Chain: a, b. Synonym: phosphoglucomu --end-- VNG2613h one-of-top-five-correct: 0.592736138147877 CThresh: 6.434646 75 best_is: cluster08 VNG2613h cluster00 -> 1dkxA2 8.1109437 80 / 98 conP: 0.372 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG2613h cluster01 -> 1qgkA 8.5394557 876 / 98 conP: 0.002 NO-CATH VNG2613h cluster02 -> 1a0b00 8.7296489 117 / 98 conP: 0.352 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG2613h cluster03 -> 1phb00 6.8277170 405 / 98 conP: 0.039 CATH-ID: 1.10.630.10 Cytochrome p450-cam (camphor 5-monoxygenase) complex with camphor (min VNG2613h cluster04 -> 1bu2A2 5.7304974 102 / 98 conP: 0.203 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG2613h cluster08 -> 2cblA1 11.011967 129 / 98 conP: 0.491 CATH-ID: 1.20.930.20 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 --end-- VNG2614h one-of-top-five-correct: 0.383512518155931 CThresh: 4.679451 75 best_is: cluster04 VNG2614h cluster00 -> 1bjaA0 6.6410024 95 / 89 conP: 0.313 CATH-ID: 1.10.10.10 Transcription regulatory protein mota. Chain: a, b. Fragment: n-termin VNG2614h cluster01 -> 1aa7A2 7.6156518 78 / 89 conP: 0.408 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG2614h cluster02 -> 1dqeA0 6.9043638 137 / 89 conP: 0.261 CATH-ID: 1.10.238.20 Pheromone-binding protein. Chain: a, b. Synonym: pbp. Engineered: yes VNG2614h cluster03 -> 1idy00 7.1242307 54 / 89 conP: 0.419 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG2614h cluster04 -> 1bia01 8.0941003 64 / 89 conP: 0.469 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG26150 one-of-top-five-correct: 0.322804212255279 CThresh: 6.672453 75 best_is: cluster09 VNG26150 cluster00 -> 1elrA0 4.9365372 128 / 103 conP: 0.147 CATH-ID: 1.25.40.10 Tpr2a-domain of hop. Chain: a. Fragment: middle domain. Engineered: ye VNG26150 cluster01 -> 1amf01 5.1187795 119 / 103 conP: 0.162 CATH-ID: 3.40.190.10 Molybdate transport protein moda. Chain: null. Fragment: n-domain, c-d VNG26150 cluster02 -> 1ad600 5.9407264 185 / 103 conP: 0.135 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG26150 cluster03 -> 1blwC0 6.7051357 137 / 103 conP: 0.213 CATH-ID: 1.20.120.200 Erythropoietin receptor. Chain: a, b. Fragment: extracellular domains. VNG26150 cluster04 -> 1bdb00 6.2122336 267 / 103 conP: 0.088 CATH-ID: 3.40.50.720 Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase. Chain: null. Biologica VNG26150 cluster09 -> 1brwA3 7.9502897 67 / 103 conP: 0.384 CATH-ID: 1.20.970.10 Pyrimidine nucleoside phosphorylase. Chain: a, b. Synonym: pynp. Ec: 2 --end-- VNG26152 one-of-top-five-correct: 0.436789379305934 CThresh: 3.056254 75 best_is: cluster09 VNG26152 cluster00 -> 1jlaA 8.2420398 546 / 57 conP: 0.002 NO-CATH VNG26152 cluster01 -> 1gytC 7.9276790 503 / 57 conP: 0.003 NO-CATH VNG26152 cluster02 -> 1i4pA2 8.0179857 149 / 57 conP: 0.210 CATH-ID: 3.10.20.120 Enterotoxin typE C-2. Chain: a VNG26152 cluster03 -> 1tys00 8.4660938 264 / 57 conP: 0.069 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG26152 cluster04 -> 1dciA1 7.7939316 212 / 57 conP: 0.103 CATH-ID: 3.90.226.10 Dienoyl-coa isomerase. Chain: a, b, c. Synonym: delta3,5,delta2,4-dien VNG26152 cluster09 -> 1tys00 8.6901479 264 / 57 conP: 0.073 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) --end-- VNG26153 one-of-top-five-correct: 0.306423338884549 CThresh: 2.314424 100 best_is: cluster13 VNG26153 cluster00 -> 1cjsA2 5.4092284 91 / 52 conP: 0.208 CATH-ID: 3.40.50.790 50s ribosomal protein l1p. Chain: a. Engineered: yes VNG26153 cluster01 -> 1khmA0 6.0060175 89 / 52 conP: 0.242 CATH-ID: 3.30.70.210 Hnrnp k. Chain: a. Fragment: c-terminal kh domain, residues 379-463 of VNG26153 cluster02 -> 1eiwA0 6.5450824 111 / 52 conP: 0.218 CATH-ID: 3.40.50.9200 Hypothetical protein mth538. Chain: a. Engineered: yes VNG26153 cluster03 -> 1bx4A1 6.3179116 279 / 52 conP: 0.026 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes. Biological_unit: monomer VNG26153 cluster04 -> 1qc7A0 5.7757296 101 / 52 conP: 0.203 CATH-ID: 1.10.220.30 Flig. Chain: a, b. Fragment: flig-c. Engineered: yes VNG26153 cluster13 -> 1evyA 6.9271692 346 / 52 conP: 0.013 NO-CATH --end-- VNG26154 one-of-top-five-correct: 0.339040903172083 CThresh: 4.260893 75 best_is: cluster14 VNG26154 cluster00 -> 1f8dA0 5.9355753 385 / 79 conP: 0.026 CATH-ID: 2.120.10.10 Neuraminidase. Chain: a. Fragment: integral membrane protein, membrane VNG26154 cluster01 -> 1qunA2 5.3956241 78 / 79 conP: 0.256 CATH-ID: 2.60.40.1070 Papd-like chaperone fimc. Chain: a, c, e, g, i, k, m, o. Engineered: y VNG26154 cluster02 -> 1i36A 6.0269793 258 / 79 conP: 0.077 NO-CATH VNG26154 cluster03 -> 1knyA1 6.2300452 125 / 79 conP: 0.224 CATH-ID: 3.30.460.10 Kanamycin nucleotidyltransferase. Chain: a, b. Synonym: kntase. Engine VNG26154 cluster04 -> 1hocA1 5.7596360 181 / 79 conP: 0.133 CATH-ID: 3.30.500.10 Murine class i major histocompatibility complex consisting of h-2d==b= VNG26154 cluster14 -> 1e79A1 7.6038933 70 / 79 conP: 0.412 CATH-ID: 2.40.10.80 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin --end-- VNG2619h one-of-top-five-correct: 0.202973315659548 CThresh: 4.737158 75 best_is: cluster16 VNG2619h cluster00 -> 1tsg00 5.2495850 98 / 59 conP: 0.139 CATH-ID: 3.90.6.10 Tsg-6. Chain: null. Fragment: link module residues 36 - 133. Synonym: VNG2619h cluster01 -> 1oneA2 4.5843346 310 / 59 conP: 0.011 CATH-ID: 3.20.20.120 Enolase. Chain: a, b. Synonym: 2-phospho-d-glycerate hydrolase. Ec: 4. VNG2619h cluster02 -> 1cmvA0 4.9150187 197 / 59 conP: 0.043 CATH-ID: 3.20.16.10 Human cytomegalovirus protease. Chain: a, b. Synonym: hcmv protease. E VNG2619h cluster03 -> 1qqeA0 5.4713351 281 / 59 conP: 0.019 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG2619h cluster04 -> 1b7vA0 4.8311587 71 / 59 conP: 0.165 CATH-ID: 1.10.1250.10 CytochromE C-553. Chain: a VNG2619h cluster16 -> 1bqv00 6.3583355 110 / 59 conP: 0.162 CATH-ID: 1.20.800.10 Ets-1. Chain: null. Fragment: pointed domain and map kinase phosphoryl --end-- VNG26250 one-of-top-five-correct: 0.355703960846847 CThresh: 3.783782 75 best_is: cluster18 VNG26250 cluster00 -> 1vin02 6.1893672 113 / 71 conP: 0.231 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG26250 cluster01 -> 1vin02 6.7998765 113 / 71 conP: 0.263 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG26250 cluster02 -> 1c07A0 5.7823787 95 / 71 conP: 0.241 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm VNG26250 cluster03 -> 1onrA0 5.8864755 316 / 71 conP: 0.036 CATH-ID: 3.20.20.70 Transaldolase b. Chain: a, b. Engineered: yes VNG26250 cluster04 -> 1ytfD1 5.3196174 53 / 71 conP: 0.296 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG26250 cluster18 -> 1bmtA1 7.7709245 87 / 71 conP: 0.379 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) --end-- VNG26270 one-of-top-five-correct: 0.361568743459682 CThresh: 8.771059 25 best_is: cluster13 VNG26270 cluster00 -> 1fxjA1 6.4591167 234 / 120 conP: 0.102 CATH-ID: 3.90.550.30 Udp-n-acetylglucosamine pyrophosphorylase. Chain: a, b. Fragment: trun VNG26270 cluster01 -> 1lfdA0 4.3877455 87 / 120 conP: 0.129 CATH-ID: 3.10.20.90 Ralgds. Chain: a, c. Fragment: ras-interacting domain, c-terminal doma VNG26270 cluster02 -> 1bg601 8.4570022 192 / 120 conP: 0.206 CATH-ID: 3.40.50.8300 N-(1-d-carboxylethyl)-l-norvaline dehydrogenase. Chain: null. Engineer VNG26270 cluster03 -> 1inp01 6.0271037 47 / 120 conP: 0.230 CATH-ID: 4.10.460.10 Inositol polyphosphate 1-phosphatase (1-ptase) (inositol-1,4-bisphosph VNG26270 cluster04 -> 1hd2A0 5.5145096 161 / 120 conP: 0.117 CATH-ID: 3.40.30.10 Peroxiredoxin 5 residues 54-214. Chain: a. Synonym: prdx5, prxv, aoeb1 VNG26270 cluster13 -> 1fgs03 8.9867586 111 / 120 conP: 0.326 CATH-ID: 3.90.190.20 Folylpolyglutamate synthetase. Chain: null. Synonym: fpgs. Engineered: --end-- VNG26272 one-of-top-five-correct: 0.224602880748398 CThresh: 6.995779 25 best_is: cluster00 VNG26272 cluster00 -> 1svb01 6.7788088 136 / 101 conP: 0.200 CATH-ID: 2.60.98.10 Tick-borne encephalitis virus glycoprotein. Chain: null VNG26272 cluster01 -> 1hx8A 4.2419859 270 / 101 conP: 0.045 NO-CATH VNG26272 cluster02 -> 1ospO1 5.3049106 73 / 101 conP: 0.202 CATH-ID: 2.30.70.11 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG26272 cluster03 -> 1kit02 4.9842487 381 / 101 conP: 0.027 CATH-ID: 2.120.10.10 Sialidase. Chain: null. Synonym: neuraminidase. Engineered: yes VNG26272 cluster04 -> 1hcz02 4.6959069 59 / 101 conP: 0.190 CATH-ID: 2.40.50.100 Cytochrome f. Chain: null --end-- VNG2628h one-of-top-five-correct: 0.445071365938302 CThresh: 7.612051 25 best_is: cluster06 VNG2628h cluster00 -> 1fim00 8.4518096 102 / 122 conP: 0.368 CATH-ID: 3.30.429.10 Macrophage migration inhibitory factor. Chain: null. Engineered: yes. VNG2628h cluster01 -> 1b24A1 7.5546211 93 / 122 conP: 0.321 CATH-ID: 3.10.28.10 I-dmoi. Chain: a. Engineered: yes. Biological_unit: monomer. Other_det VNG2628h cluster02 -> 1onrA0 7.4823430 316 / 122 conP: 0.114 CATH-ID: 3.20.20.70 Transaldolase b. Chain: a, b. Engineered: yes VNG2628h cluster03 -> 1lci04 7.5935973 99 / 122 conP: 0.316 CATH-ID: 3.30.300.30 Luciferase. Chain: null. Engineered: yes VNG2628h cluster04 -> 1fim00 7.8532947 102 / 122 conP: 0.329 CATH-ID: 3.30.429.10 Macrophage migration inhibitory factor. Chain: null. Engineered: yes. VNG2628h cluster06 -> 1fjgC1 9.3681492 91 / 122 conP: 0.447 CATH-TRUNC --end-- VNG2633h one-of-top-five-correct: 0.361275909675931 CThresh: 4.168568 75 best_is: cluster07 VNG2633h cluster00 -> 1e7aA1 7.1010144 103 / 64 conP: 0.252 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG2633h cluster01 -> 1ddf00 6.5793224 127 / 64 conP: 0.182 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG2633h cluster02 -> 1a0p01 7.8777034 91 / 64 conP: 0.324 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG2633h cluster03 -> 14psA0 6.5793224 226 / 64 conP: 0.070 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un VNG2633h cluster04 -> 1e7aA1 6.5793224 103 / 64 conP: 0.224 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG2633h cluster07 -> 1c07A0 8.1711498 95 / 64 conP: 0.333 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm --end-- VNG26360 one-of-top-five-correct: 0.340376745643354 CThresh: 3.850056 75 best_is: cluster17 VNG26360 cluster00 -> 1bco01 6.8042272 222 / 80 conP: 0.141 CATH-ID: 3.30.420.10 Bacteriophage mu transposase. Chain: null. Domain: core (residues 248 VNG26360 cluster01 -> 1c5kA0 7.2088140 397 / 80 conP: 0.038 CATH-ID: 2.130.10.20 Tolb protein. Chain: a. Fragment: entire protein. Engineered: yes. Oth VNG26360 cluster02 -> 1ema00 6.3996404 221 / 80 conP: 0.128 CATH-ID: 2.40.155.10 Green fluorescent protein. Chain: null. Engineered: yes. Mutation: 65 VNG26360 cluster03 -> 1eswA0 4.9835866 500 / 80 conP: 0.008 CATH-ID: 3.20.20.80 Amylomaltase. Chain: a. Engineered: yes VNG26360 cluster04 -> 1krs00 5.7046121 110 / 80 conP: 0.241 CATH-ID: 2.40.50.10 Lysyl-tRNA synthetase (product of lyss gene). Chain: null. Domain: ant VNG26360 cluster17 -> 1c5kA0 7.4111074 397 / 80 conP: 0.040 CATH-ID: 2.130.10.20 Tolb protein. Chain: a. Fragment: entire protein. Engineered: yes. Oth --end-- VNG2641h one-of-top-five-correct: 0.381771093324458 CThresh: 6.996611 69 best_is: cluster08 VNG2641h cluster00 -> 1lea00 7.5768705 72 / 98 conP: 0.321 CATH-ID: 1.10.10.10 Lexa repressor DNA binding domain (nmr, minimized average structure) VNG2641h cluster01 -> 1bcrB 6.6375239 146 / 98 conP: 0.176 NO-CATH VNG2641h cluster02 -> 1hstA0 6.2601369 74 / 98 conP: 0.242 CATH-ID: 1.10.10.10 Histone h5 (globular domain) VNG2641h cluster03 -> 1fokA1 5.1706657 281 / 98 conP: 0.050 CATH-ID: 3.90.241.10 Foki restriction endonuclease. Chain: a. Synonym: r.Foki. Engineered: VNG2641h cluster04 -> 1isvA 8.1704363 436 / 98 conP: 0.040 NO-CATH VNG2641h cluster08 -> 1tpfA0 8.9198421 250 / 98 conP: 0.164 CATH-ID: 3.20.20.90 Triosephosphate isomerase --end-- VNG2643h one-of-top-five-correct: 0.215106671521991 CThresh: 8.889012 25 best_is: cluster02 VNG2643h cluster00 -> 1mioB4 5.8824130 98 / 129 conP: 0.187 CATH-ID: 3.40.50.10 Nitrogenase molybdenum-iron protein VNG2643h cluster01 -> 1dar05 4.3352267 87 / 129 conP: 0.135 CATH-ID: 3.30.70.240 Elongation factor g. Chain: null. Synonym: ef-g VNG2643h cluster02 -> 1oneA2 6.8482534 310 / 129 conP: 0.088 CATH-ID: 3.20.20.120 Enolase. Chain: a, b. Synonym: 2-phospho-d-glycerate hydrolase. Ec: 4. VNG2643h cluster03 -> 1b22A0 6.1105595 70 / 129 conP: 0.222 CATH-ID: 1.10.150.70 DNA repair protein rad51. Chain: a. Fragment: n-terminal domain. Engin VNG2643h cluster04 -> 1kqbA 5.1686189 216 / 129 conP: 0.090 NO-CATH --end-- VNG2644c one-of-top-five-correct: 0.546990042148429 CThresh: 6.985549 65 best_is: cluster05 VNG2644c cluster00 -> 1i9tA0 7.8966248 189 / 117 conP: 0.242 CATH-ID: 3.90.190.10 mRNA capping enzyme. Chain: a. Fragment: tpase domain (residues 1-210) VNG2644c cluster01 -> 1ewqA5 8.1486673 211 / 117 conP: 0.232 CATH-ID: 3.40.50.300 DNA mismatch repair protein muts. Chain: a, b. Synonym: taq muts subun VNG2644c cluster02 -> 1e79A2 8.6891977 286 / 117 conP: 0.184 CATH-ID: 3.40.50.300 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG2644c cluster03 -> 1amoA4 6.4485621 160 / 117 conP: 0.200 CATH-ID: 3.40.50.80 NADPH-cytochrome p450 reductase. Chain: a, b. Fragment: hydrophilic do VNG2644c cluster04 -> 1kqpA 7.6797059 271 / 117 conP: 0.155 NO-CATH VNG2644c cluster05 -> 1f89A 10.317871 271 / 117 conP: 0.282 NO-CATH --end-- VNG2645h one-of-top-five-correct: 0.332428533381884 CThresh: 6.393321 75 best_is: cluster11 VNG2645h cluster00 -> 1bu2A1 5.9317107 112 / 90 conP: 0.183 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG2645h cluster01 -> 1ag8A1 5.6247983 263 / 90 conP: 0.060 CATH-ID: 3.40.605.10 Aldehyde dehydrogenase. Chain: a, b, c, d. Biological_unit: homotetram VNG2645h cluster02 -> 1bu2A1 7.7572969 112 / 90 conP: 0.275 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG2645h cluster03 -> 1a8vA1 5.2430816 49 / 90 conP: 0.230 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG2645h cluster04 -> 1fc3A0 5.8184740 119 / 90 conP: 0.170 CATH-ID: 1.10.10.60 Spo0a. Chain: a, b, c. Fragment: c-terminal domain. Synonym: sporulati VNG2645h cluster11 -> 1di1A0 8.2393276 290 / 90 conP: 0.098 CATH-ID: 1.10.615.10 Aristolochene synthase. Chain: a, b. Synonym: sesquiterpene cyclase, a --end-- VNG26471 one-of-top-five-correct: 0.457258057423395 CThresh: 5.638447 75 best_is: cluster00 VNG26471 cluster00 -> 2tpt01 9.3820323 107 / 88 conP: 0.419 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG26471 cluster01 -> 1e8xA3 8.7790826 185 / 88 conP: 0.246 CATH-ID: 1.25.40.110 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG26471 cluster02 -> 1fiqB2 7.7222776 126 / 88 conP: 0.278 CATH-ID: 3.30.465.10 Xanthine oxidase. Chain: a. Fragment: residues 1-219. Synonym: xo. Xan VNG26471 cluster03 -> 1bu2A2 6.3001248 102 / 88 conP: 0.236 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG26471 cluster04 -> 2tpt01 7.6273180 107 / 88 conP: 0.303 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de --end-- VNG26520 one-of-top-five-correct: 0.416558557294403 CThresh: 7.445608 25 best_is: cluster05 VNG26520 cluster00 -> 1qsaA2 6.5507375 70 / 112 conP: 0.274 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG26520 cluster01 -> 1i7uA 5.5499812 275 / 112 conP: 0.073 NO-CATH VNG26520 cluster02 -> 1admA1 4.7080410 237 / 112 conP: 0.073 CATH-ID: 3.40.50.150 Adenine-n6-DNA-methyltransferase taqi. Chain: a, b. Ec: 2.1.1.72 VNG26520 cluster03 -> 3ncmA0 4.0964442 92 / 112 conP: 0.140 CATH-ID: 2.60.40.10 Neural cell adhesion molecule, large isoform. Chain: a. Fragment: modu VNG26520 cluster04 -> 1ggqA0 6.6455742 162 / 112 conP: 0.179 CATH-ID: 1.20.120.240 Outer surface protein c. Chain: a, b, c, d. Fragment: residues 38-210. VNG26520 cluster05 -> 1l5vA 9.2019578 796 / 112 conP: 0.009 NO-CATH --end-- VNG26522 one-of-top-five-correct: 0.30009447451949 CThresh: 7.479821 25 best_is: cluster12 VNG26522 cluster00 -> 1al302 7.5667325 136 / 100 conP: 0.217 CATH-ID: 3.40.190.60 Cys regulon transcriptional activator cysb. Chain: null. Fragment: cof VNG26522 cluster01 -> 1fapB0 5.0389396 95 / 100 conP: 0.151 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG26522 cluster02 -> 1k44A 5.2460998 135 / 100 conP: 0.125 NO-CATH VNG26522 cluster03 -> 1d6jA0 4.6269573 177 / 100 conP: 0.082 CATH-ID: 3.40.50.300 Adenosine-5'phosphosulfate kinase. Chain: a, b. Synonym: aps kinase. E VNG26522 cluster04 -> 1ijqA0 6.9605967 308 / 100 conP: 0.065 CATH-ID: 2.130.10.20 Low-density lipoprotein receptor. Chain: a, b. Fragment: ywtd-e3 domai VNG26522 cluster12 -> 1ixh01 8.0947510 155 / 100 conP: 0.220 CATH-ID: 3.40.190.10 Phosphate-binding protein. Chain: null. Engineered: yes. Biological_un --end-- VNG2653c one-of-top-five-correct: 0.454097467403156 CThresh: 6.600437 75 best_is: cluster14 VNG2653c cluster00 -> 1olgA0 4.8426663 42 / 131 conP: 0.283 CATH-ID: 4.10.170.10 P53 (oligomerization domain) (nmr, minimized average structure) VNG2653c cluster01 -> 1olgA0 5.5787286 42 / 131 conP: 0.327 CATH-ID: 4.10.170.10 P53 (oligomerization domain) (nmr, minimized average structure) VNG2653c cluster02 -> 1il4A 6.1184145 267 / 131 conP: 0.146 NO-CATH VNG2653c cluster03 -> 1sesA2 6.6308347 318 / 131 conP: 0.131 CATH-ID: 3.40.690.10 Seryl-tRNA synthetase (serine-tRNA ligase) complexed with seryl-hydrox VNG2653c cluster04 -> 1ijkA 6.2347657 199 / 131 conP: 0.203 NO-CATH VNG2653c cluster14 -> 1joeA 8.8042942 148 / 131 conP: 0.412 NO-CATH --end-- VNG26650 one-of-top-five-correct: 0.251766513323338 CThresh: 7.694389 25 best_is: cluster08 VNG26650 cluster00 -> 1gtxA1 4.9758626 167 / 125 conP: 0.131 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG26650 cluster01 -> 1fjgB2 6.4138144 62 / 125 conP: 0.291 CATH-TRUNC VNG26650 cluster02 -> 1fapB0 5.6544395 95 / 125 conP: 0.215 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG26650 cluster03 -> 1serA1 5.2711684 53 / 125 conP: 0.237 CATH-ID: 1.20.15.10 Seryl-tRNA synthetase complexed with tRNA-ser 2 (gga anticodon) VNG26650 cluster04 -> 1bj4A2 5.1484743 160 / 125 conP: 0.141 CATH-ID: 3.30.70.500 Serine hydroxymethyltransferase. Chain: a. Engineered: yes VNG26650 cluster08 -> 2vik00 6.9593109 126 / 125 conP: 0.251 CATH-ID: 3.40.20.10 Villin 14t. Chain: null. Fragment: residues 1 - 126. Synonym: villin d --end-- VNG2673h one-of-top-five-correct: 0.158364317090774 CThresh: 1.764203 100 best_is: cluster04 VNG2673h cluster00 -> 1dcqA0 4.7280758 276 / 35 conP: 0.003 CATH-ID: 1.25.40.50 Pyk2-associated protein beta. Chain: a. Fragment: arf-gap domain. Engi VNG2673h cluster01 -> 1dciA1 4.4692423 212 / 35 conP: 0.010 CATH-ID: 3.90.226.10 Dienoyl-coa isomerase. Chain: a, b, c. Synonym: delta3,5,delta2,4-dien VNG2673h cluster02 -> 1aa7A2 4.7280758 78 / 35 conP: 0.135 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG2673h cluster03 -> 1ahjB1 4.7280758 110 / 35 conP: 0.076 CATH-ID: 1.10.472.20 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het VNG2673h cluster04 -> 1a9xA8 4.7280758 106 / 35 conP: 0.082 CATH-ID: 3.40.50.1380 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee --end-- VNG2674h one-of-top-five-correct: 0.3590149998897 CThresh: 9.465158 25 best_is: cluster18 VNG2674h cluster00 -> 1cpy02 6.3698042 72 / 135 conP: 0.221 CATH-ID: 1.20.1030.10 Serine carboxypeptidase. Chain: null. Mutation: e65a, e145a VNG2674h cluster01 -> 2hhmA2 6.5302583 124 / 135 conP: 0.185 CATH-ID: 3.40.191.10 Human inositol monophosphatase dimer complex with gadolinium and sulfa VNG2674h cluster02 -> 1cf7B0 7.3382212 82 / 135 conP: 0.262 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG2674h cluster03 -> 2a3dA0 6.7325151 73 / 135 conP: 0.238 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG2674h cluster04 -> 1wdnA2 5.5607215 124 / 135 conP: 0.146 CATH-ID: 3.40.190.30 Glutamine binding protein. Chain: a. Synonym: glnbp. Other_details: li VNG2674h cluster18 -> 1fapB0 8.9296514 95 / 135 conP: 0.345 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra --end-- VNG5003h one-of-top-five-correct: 0.139463103243204 CThresh: 9.268059 25 best_is: cluster07 VNG5003h cluster00 -> 1t7pA4 4.4870227 101 / 111 conP: 0.101 CATH-ID: 1.10.473.10 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi VNG5003h cluster01 -> 2ilk01 4.7864655 106 / 111 conP: 0.106 CATH-ID: 1.20.120.200 Interleukin-10. Chain: null. Engineered: yes VNG5003h cluster02 -> 1au1A0 4.4729072 166 / 111 conP: 0.069 CATH-ID: 1.20.120.210 Interferon-beta. Chain: a, b. Engineered: yes VNG5003h cluster03 -> 1iso00 4.0549605 414 / 111 conP: 0.014 CATH-ID: 3.40.718.10 Isocitrate dehydrogenase. Chain: null. Synonym: oxalosuccinate decarbo VNG5003h cluster04 -> 1a92A0 4.7074607 50 / 111 conP: 0.142 CATH-ID: 4.10.220.40 Delta antigen. Chain: a, b, c, d. Fragment: oligomerization domain. Sy VNG5003h cluster07 -> 1eu8A1 5.9918644 190 / 111 conP: 0.090 CATH-ID: 3.40.190.10 Trehalose/maltose binding protein. Chain: a. Engineered: yes --end-- VNG5008h one-of-top-five-correct: 0.566564306257181 CThresh: 8.571139 25 best_is: cluster06 VNG5008h cluster00 -> 1fjgB2 5.8647627 62 / 130 conP: 0.232 CATH-TRUNC VNG5008h cluster01 -> 1cf9A2 5.7602038 121 / 130 conP: 0.176 CATH-ID: 1.10.422.10 Catalase hpii. Chain: a, b, c, d. Engineered: yes. Mutation: yes VNG5008h cluster02 -> 1flp00 7.7050439 142 / 130 conP: 0.250 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG5008h cluster03 -> 1c17M0 6.1968766 142 / 130 conP: 0.177 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG5008h cluster04 -> 1ns1A0 5.5203158 73 / 130 conP: 0.205 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re VNG5008h cluster06 -> 1dofA 10.958110 385 / 130 conP: 0.187 NO-CATH --end-- VNG5009h one-of-top-five-correct: 0.613158622779528 CThresh: 1.595823 100 best_is: cluster01 VNG5009h cluster00 -> 1lmb30 7.2285129 87 / 64 conP: 0.426 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG5009h cluster01 -> 1dw9A 9.8252750 152 / 64 conP: 0.436 NO-CATH VNG5009h cluster02 -> 1dw9A 6.3629255 152 / 64 conP: 0.221 NO-CATH VNG5009h cluster03 -> 1lmb30 7.0121161 87 / 64 conP: 0.411 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG5009h cluster04 -> 1lmb30 6.5793224 87 / 64 conP: 0.381 CATH-ID: 1.10.260.10 Lambda repressor/operator complex --end-- VNG50162 one-of-top-five-correct: 0.440923275158949 CThresh: 2.711200 100 best_is: cluster17 VNG50162 cluster00 -> 1sctA0 6.8417742 149 / 68 conP: 0.229 CATH-ID: 1.10.490.10 Hemoglobin. Heterogen: carbon monoxide VNG50162 cluster01 -> 1jzkA 6.9049213 145 / 68 conP: 0.239 NO-CATH VNG50162 cluster02 -> 1k62A 6.6292930 450 / 68 conP: 0.012 NO-CATH VNG50162 cluster03 -> 1qo0D2 5.6037793 46 / 68 conP: 0.375 CATH-ID: 1.10.15.10 Amic. Chain: a, b. Fragment: amide receptor. Engineered: yes. Other_de VNG50162 cluster04 -> 1qqnA4 6.4828936 84 / 68 conP: 0.343 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG50162 cluster17 -> 1flp00 8.3291426 142 / 68 conP: 0.329 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) --end-- VNG50270 one-of-top-five-correct: 0.432826051750089 CThresh: 4.647803 75 best_is: cluster06 VNG50270 cluster00 -> 1ecsA0 6.8792850 120 / 84 conP: 0.269 CATH-ID: 3.10.180.10 Bleomycin resistance protein. Chain: a, b. Engineered: yes VNG50270 cluster01 -> 1jflA 6.4703156 228 / 84 conP: 0.117 CATH-TRUNC VNG50270 cluster02 -> 1b4fA0 5.8901312 74 / 84 conP: 0.289 CATH-ID: 1.10.150.50 Ephb2. Chain: a, b, c, d, e, f, g, h. Fragment: sam domain. Engineered VNG50270 cluster03 -> 1baq00 6.2709937 139 / 84 conP: 0.209 CATH-ID: 1.10.940.10 Antitermination factor nusb. Chain: null. Engineered: yes VNG50270 cluster04 -> 1npc02 6.3809882 161 / 84 conP: 0.185 CATH-ID: 1.10.390.10 Neutral protease VNG50270 cluster06 -> 1jflA 8.7529810 228 / 84 conP: 0.204 CATH-TRUNC --end-- VNG50271 one-of-top-five-correct: 0.607300154035183 CThresh: 5.196216 75 best_is: cluster14 VNG50271 cluster00 -> 1ccwB1 9.6208136 417 / 89 conP: 0.071 CATH-ID: 3.20.20.290 Glutamate mutase. Chain: a, c. Fragment: b12-binding subunit. Synonym: VNG50271 cluster01 -> 1f3tD2 9.2080202 226 / 89 conP: 0.232 CATH-ID: 3.20.20.10 Ornithine decarboxylase. Chain: a, b, c, d. Synonym: odc. Engineered: VNG50271 cluster02 -> 1jscA 5.8992248 541 / 89 conP: 0.010 CATH-TRUNC VNG50271 cluster03 -> 1qf6A4 8.8628824 296 / 89 conP: 0.136 CATH-ID: 3.40.690.10 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG50271 cluster04 -> 1hplA1 8.4641480 337 / 89 conP: 0.093 CATH-ID: 3.40.50.950 Lipase (triacylglycerol hydrolase) VNG50271 cluster14 -> 1db3A0 10.821401 335 / 89 conP: 0.170 CATH-ID: 3.40.50.720 Gdp-mannose 4,6-dehydratase. Chain: a. Engineered: yes --end-- VNG50370 one-of-top-five-correct: 0.384832566422337 CThresh: 5.107245 75 best_is: cluster19 VNG50370 cluster00 -> 2bct00 8.0442712 502 / 87 conP: 0.022 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG50370 cluster01 -> 1ai4B 7.3628783 557 / 87 conP: 0.012 CATH-TRUNC VNG50370 cluster02 -> 1e7aA3 7.7581601 92 / 87 conP: 0.361 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG50370 cluster03 -> 1korA 7.0740222 380 / 87 conP: 0.044 CATH-TRUNC VNG50370 cluster04 -> 1bk6A0 7.2696504 422 / 87 conP: 0.033 CATH-ID: 1.25.30.10 Karyopherin alpha. Chain: a, b. Fragment: armadillo domain. Synonym: i VNG50370 cluster19 -> 1ft1B0 8.3489247 416 / 87 conP: 0.047 CATH-ID: 1.50.10.40 Protein farnesyltransferase. Chain: a, b. Engineered: yes --end-- VNG50372 one-of-top-five-correct: 0.46498356943223 CThresh: 3.819458 75 best_is: cluster04 VNG50372 cluster00 -> 1b5dA0 5.6736134 246 / 71 conP: 0.065 CATH-ID: 3.30.572.10 Deoxycytidylate hydroxymethylase. Chain: a, b. Synonym: deoxycytidylat VNG50372 cluster01 -> 1d0nA3 6.0920640 121 / 71 conP: 0.211 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG50372 cluster02 -> 1i4fA 5.6736134 275 / 71 conP: 0.049 CATH-TRUNC VNG50372 cluster03 -> 1dlwA0 5.4638823 116 / 71 conP: 0.190 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a. Engineered: yes VNG50372 cluster04 -> 1tys00 9.0293112 264 / 71 conP: 0.132 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) --end-- VNG50376 one-of-top-five-correct: 0.71368662544793 CThresh: 1.476663 100 best_is: cluster00 VNG50376 cluster00 -> 1jgjA0 10.805727 217 / 73 conP: 0.424 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG50376 cluster01 -> 1auwA2 9.1419007 228 / 73 conP: 0.291 CATH-ID: 1.20.200.10 Delta 2 crystallin. Chain: a, b, c, d. Engineered: yes. Mutation: h89n VNG50376 cluster02 -> 1qdbA 8.1020089 473 / 73 conP: 0.028 CATH-TRUNC VNG50376 cluster03 -> 1by1A0 9.1419007 209 / 73 conP: 0.330 CATH-ID: 1.20.900.10 Pix. Chain: a. Fragment: dbl homology domain. Engineered: yes. Biologi VNG50376 cluster04 -> 1kmeA 9.9738140 227 / 73 conP: 0.345 CATH-TRUNC --end-- VNG5038h one-of-top-five-correct: 0.305208366002822 CThresh: 3.084522 75 best_is: cluster11 VNG5038h cluster00 -> 191400 5.9226563 171 / 49 conP: 0.069 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG5038h cluster01 -> 1mxa02 6.3914577 129 / 49 conP: 0.134 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met VNG5038h cluster02 -> 1dkxA1 6.1570570 135 / 49 conP: 0.117 CATH-ID: 2.60.34.10 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG5038h cluster03 -> 191400 7.0946598 171 / 49 conP: 0.094 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG5038h cluster04 -> 1flgA0 5.2194542 582 / 49 conP: 0.000 CATH-ID: 2.140.10.10 Quinoprotein ethanol dehydrogenase. Chain: a, b VNG5038h cluster11 -> 191400 7.3290605 171 / 49 conP: 0.100 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment --end-- VNG50420 one-of-top-five-correct: 0.653754768502263 CThresh: 4.603111 75 best_is: cluster09 VNG50420 cluster00 -> 1c17M0 8.1718861 142 / 105 conP: 0.397 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG50420 cluster01 -> 1be3C0 8.6989302 378 / 105 conP: 0.137 CATH-ID: 1.20.810.10 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG50420 cluster02 -> 1bbhA0 6.9691776 131 / 105 conP: 0.333 CATH-ID: 1.20.120.10 Cytochrome c' VNG50420 cluster03 -> 1eumA0 8.2307122 161 / 105 conP: 0.371 CATH-ID: 1.20.120.190 Ferritin 1. Chain: a, b, c, d, e, f. Engineered: yes VNG50420 cluster04 -> 3ladA1 8.4293341 228 / 105 conP: 0.285 CATH-ID: 3.50.50.60 Dihydrolipoamide dehydrogenase VNG50420 cluster09 -> 1ez3A0 10.734533 124 / 105 conP: 0.608 CATH-ID: 1.20.1040.20 Syntaxin-1a. Chain: a, b, c. Fragment: n-terminal domain. Synonym: syn --end-- VNG50450 one-of-top-five-correct: 0.487954571844083 CThresh: 6.921242 75 best_is: cluster19 VNG50450 cluster00 -> 1eyvA0 6.1895978 131 / 96 conP: 0.170 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr VNG50450 cluster01 -> 1vin02 6.6637922 113 / 96 conP: 0.211 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG50450 cluster02 -> 1dkxA2 7.2998633 80 / 96 conP: 0.290 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG50450 cluster03 -> 1ash00 5.9284203 147 / 96 conP: 0.145 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG50450 cluster04 -> 1az902 6.4247919 266 / 96 conP: 0.076 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet VNG50450 cluster19 -> 1jgiA 10.118884 628 / 96 conP: 0.017 NO-CATH --end-- VNG5047h one-of-top-five-correct: 0.494462870678601 CThresh: 4.655850 75 best_is: cluster03 VNG5047h cluster00 -> 1a9xA2 5.7570212 217 / 88 conP: 0.117 CATH-ID: 3.30.470.20 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG5047h cluster01 -> 1euvB0 6.0269793 79 / 88 conP: 0.300 CATH-ID: 3.10.20.40 Ulp1 protease. Chain: a. Fragment: c-terminal protease domain. Enginee VNG5047h cluster02 -> 1d1dA2 7.7482949 80 / 88 conP: 0.411 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG5047h cluster03 -> 1am300 9.3449588 70 / 88 conP: 0.545 CATH-ID: 1.10.1200.30 HIV capsid. Chain: null. Fragment: c-terminal domain, residues 151 - 2 VNG5047h cluster04 -> 1qqeA0 6.7396494 281 / 88 conP: 0.095 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation --end-- VNG5048h one-of-top-five-correct: 0.339864021610022 CThresh: 2.992936 100 best_is: cluster02 VNG5048h cluster00 -> 1a1w00 5.8234810 83 / 51 conP: 0.215 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG5048h cluster01 -> 1e7aA1 7.2132319 103 / 51 conP: 0.237 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5048h cluster02 -> 1aisB1 7.6764822 99 / 51 conP: 0.273 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG5048h cluster03 -> 8rucA2 6.5183565 313 / 51 conP: 0.014 CATH-ID: 3.20.20.110 Ribulose-1,5-bisphosphate carboxylase/oxygenase. Chain: a, c, e, g, i, VNG5048h cluster04 -> 1aorA2 6.0551062 186 / 51 conP: 0.067 CATH-ID: 1.10.569.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri --end-- VNG5049h one-of-top-five-correct: 0.571266107530903 CThresh: 3.697042 75 best_is: cluster15 VNG5049h cluster00 -> 1cf7B0 8.4726983 82 / 76 conP: 0.466 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG5049h cluster01 -> 1e7aA6 7.7171160 78 / 76 conP: 0.422 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5049h cluster02 -> 1e7aA6 7.4342890 78 / 76 conP: 0.402 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5049h cluster03 -> 2ezh00 9.1221657 65 / 76 conP: 0.552 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: igamma subdomain, residues 174 - 2 VNG5049h cluster04 -> 1otfA0 7.0235859 59 / 76 conP: 0.416 CATH-ID: 3.30.69.10 4-oxalocrotonate tautomerase. Chain: a, b, c, d, e, f. Synonym: 4-oxal VNG5049h cluster15 -> 1pbgA0 10.029741 454 / 76 conP: 0.043 CATH-ID: 3.20.20.80 6-phospho-beta-d-galactosidase. Chain: a, b. Synonym: pgal. Engineered --end-- VNG5050h one-of-top-five-correct: 0.342743967403165 CThresh: 6.486606 75 best_is: cluster03 VNG5050h cluster00 -> 1qazA0 7.3933143 351 / 92 conP: 0.053 CATH-ID: 1.50.40.20 Alginate lyase a1-iii. Chain: a. Engineered: yes. Biological_unit: mon VNG5050h cluster01 -> 1dkqA0 5.8801025 410 / 92 conP: 0.023 CATH-ID: 3.40.50.1240 Phytase. Chain: a. Synonym: ph 2.5 acid phosphatase. Engineered: yes. VNG5050h cluster02 -> 1f5xA0 5.5734212 208 / 92 conP: 0.090 CATH-ID: 1.20.900.10 Rho-gef vav. Chain: a. Fragment: dbl homology domain. Engineered: yes VNG5050h cluster03 -> 1sctA0 8.3623807 149 / 92 conP: 0.256 CATH-ID: 1.10.490.10 Hemoglobin. Heterogen: carbon monoxide VNG5050h cluster04 -> 1eca00 7.1994270 136 / 92 conP: 0.214 CATH-ID: 1.10.490.10 Hemoglobin (erythrocruorin, aquo met) --end-- VNG5053h one-of-top-five-correct: 0.34794597776169 CThresh: 3.478880 75 best_is: cluster03 VNG5053h cluster00 -> 1e79A3 7.9038409 131 / 55 conP: 0.213 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG5053h cluster01 -> 1chkA2 6.7715306 95 / 55 conP: 0.236 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG5053h cluster02 -> 1chkA2 6.5450685 95 / 55 conP: 0.225 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG5053h cluster03 -> 1dik05 7.9038409 89 / 55 conP: 0.317 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG5053h cluster04 -> 1c07A0 7.6773788 95 / 55 conP: 0.287 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm --end-- VNG5054h one-of-top-five-correct: 0.377849712440032 CThresh: 2.773018 100 best_is: cluster19 VNG5054h cluster00 -> 1cd1A2 6.3667687 95 / 54 conP: 0.239 CATH-ID: 2.60.40.10 Cd1. Chain: a, b, c, d. Fragment: alpha1, alpha2, alpha3, beta2-microg VNG5054h cluster01 -> 1kmjA 5.9113534 404 / 54 conP: 0.005 NO-CATH VNG5054h cluster02 -> 1admA1 7.0498917 237 / 54 conP: 0.057 CATH-ID: 3.40.50.150 Adenine-n6-DNA-methyltransferase taqi. Chain: a, b. Ec: 2.1.1.72 VNG5054h cluster03 -> 1hnf02 6.1580507 79 / 54 conP: 0.267 CATH-ID: 2.60.40.10 Cd2 (human) VNG5054h cluster04 -> 1gh8A0 7.5053070 89 / 54 conP: 0.320 CATH-ID: 3.30.70.60 Translation elongation factor 1beta. Chain: a. Engineered: yes VNG5054h cluster19 -> 1ha101 7.9607224 85 / 54 conP: 0.361 CATH-ID: 3.30.70.330 Hnrnp a1. Chain: null. Fragment: hnrnp a1 (rbd1, rbd2). Synonym: heter --end-- VNG5061c one-of-top-five-correct: 0.661161548644941 CThresh: 2.959498 100 best_is: cluster08 VNG5061c cluster00 -> 1dusA0 10.386174 192 / 80 conP: 0.422 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5061c cluster01 -> 1dusA0 9.2810174 192 / 80 conP: 0.347 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5061c cluster02 -> 1dusA0 10.386174 192 / 80 conP: 0.422 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5061c cluster03 -> 2scuB3 9.2317480 146 / 80 conP: 0.439 CATH-ID: 3.40.50.261 Succinyl-coa ligase. Chain: a, d. Synonym: scs. Engineered: yes. Biolo VNG5061c cluster04 -> 1dusA0 9.7899092 192 / 80 conP: 0.381 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5061c cluster08 -> 1dusA0 10.648435 192 / 80 conP: 0.441 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes --end-- VNG50630 one-of-top-five-correct: 0.394790966123118 CThresh: 3.024760 80 best_is: cluster02 VNG50630 cluster00 -> 1de6A0 6.2820806 416 / 66 conP: 0.013 CATH-ID: 3.20.20.310 L-rhamnose isomerase. Chain: a, b, c, d. Engineered: yes VNG50630 cluster01 -> 1d2mA3 7.7828909 177 / 66 conP: 0.202 CATH-ID: 3.40.50.300 Excinuclease abc subunit b. Chain: a. Synonym: uvrb. Engineered: yes VNG50630 cluster02 -> 1h72C 7.9972924 296 / 66 conP: 0.071 NO-CATH VNG50630 cluster03 -> 1qrqA0 6.0676792 325 / 66 conP: 0.031 CATH-ID: 3.20.20.100 Kv beta2 protein. Chain: a, b, c, d. Fragment: beta subunit core. Engi VNG50630 cluster04 -> 1dv1B1 6.2820806 85 / 66 conP: 0.304 CATH-ID: 3.40.50.20 Biotin carboxylase. Chain: a, b. Engineered: yes --end-- VNG50631 one-of-top-five-correct: 0.214941117718551 CThresh: 6.381631 75 best_is: cluster11 VNG50631 cluster00 -> 1bxgB1 5.9547849 131 / 95 conP: 0.175 CATH-ID: 3.40.192.10 Phenylalanine dehydrogenase. Chain: a, b. Engineered: yes. Biological_ VNG50631 cluster01 -> 1cnt10 5.5707791 150 / 95 conP: 0.142 CATH-ID: 1.20.120.200 Ciliary neurotrophic factor. Chain: 1, 2, 3, 4. Synonym: cntf. Enginee VNG50631 cluster02 -> 1gewA 4.6033792 333 / 95 conP: 0.031 NO-CATH VNG50631 cluster03 -> 1gtmA2 5.3787763 238 / 95 conP: 0.076 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a, b, c. Biological_unit: homohexamer VNG50631 cluster04 -> 1aje00 5.5707791 194 / 95 conP: 0.107 CATH-ID: 3.40.50.300 Cdc42hs. Chain: null. Engineered: yes. Biological_unit: monomer. Other VNG50631 cluster11 -> 1e7aA2 6.4826384 90 / 95 conP: 0.251 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG50640 one-of-top-five-correct: 0.287291517397138 CThresh: 4.793589 75 best_is: cluster07 VNG50640 cluster00 -> 1g28A0 5.8142472 104 / 73 conP: 0.196 CATH-ID: 3.30.450.20 Phy3 protein. Chain: a, b, c, d. Fragment: fmn-binding domain of chime VNG50640 cluster01 -> 1cbf02 5.8142472 121 / 73 conP: 0.172 CATH-ID: 3.30.950.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m VNG50640 cluster02 -> 1jli00 6.2302039 112 / 73 conP: 0.203 CATH-ID: 1.20.120.200 Interleukin 3. Chain: null. Synonym: multi-csf. Engineered: yes. Mutat VNG50640 cluster03 -> 1bwzA2 4.5663771 137 / 73 conP: 0.110 CATH-ID: 3.10.310.10 Diaminopimelate epimerase. Chain: a. Synonym: dap epimerase. Engineere VNG50640 cluster04 -> 1qstA0 5.5203158 160 / 73 conP: 0.116 CATH-ID: 3.40.630.30 Tgcn5 histone acetyl transferase. Chain: a. Engineered: yes. Biologica VNG50640 cluster07 -> 1dbhA1 7.3223360 208 / 73 conP: 0.122 CATH-ID: 1.20.900.10 Human sos 1. Chain: a. Fragment: dbl and pleckstrin homology domains. --end-- VNG50641 one-of-top-five-correct: 0.3848854163133 CThresh: 5.583735 75 best_is: cluster02 VNG50641 cluster00 -> 1bw6A0 6.2715493 56 / 77 conP: 0.280 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer VNG50641 cluster01 -> 2abk02 6.2970824 99 / 77 conP: 0.210 CATH-ID: 1.10.15.10 Endonuclease iii. Chain: null. Ec: 4.2.99.18 VNG50641 cluster02 -> 1dgnA0 8.7933330 89 / 77 conP: 0.374 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG50641 cluster03 -> 1chkA2 6.1059571 95 / 77 conP: 0.207 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG50641 cluster04 -> 1ig6A0 7.3203282 107 / 77 conP: 0.249 CATH-ID: 1.10.150.60 Modulator recognition factor 2. Chain: a. Fragment: DNA-binding domain --end-- VNG50680 one-of-top-five-correct: 0.511935411786906 CThresh: 3.423404 75 best_is: cluster10 VNG50680 cluster00 -> 1bjt04 7.8172812 102 / 69 conP: 0.357 CATH-ID: 3.30.70.230 Topoisomerase ii. Chain: null. Fragment: DNA-binding and cleavage core VNG50680 cluster01 -> 1dq3A3 7.9671787 87 / 69 conP: 0.403 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG50680 cluster02 -> 1i7uA 7.6473864 275 / 69 conP: 0.084 CATH-TRUNC VNG50680 cluster03 -> 2hfh00 5.4313918 93 / 69 conP: 0.234 CATH-ID: 1.10.10.10 Genesis. Chain: null. Fragment: DNA-binding domain. Synonym: hfh-2. En VNG50680 cluster04 -> 1af500 9.1282202 126 / 69 conP: 0.388 CATH-ID: 3.10.28.10 I-crei. Chain: null. Synonym: DNA endonuclease i-crei. Engineered: yes VNG50680 cluster10 -> 1xer00 9.4100252 102 / 69 conP: 0.468 CATH-ID: 3.30.70.20 Ferredoxin. Chain: null --end-- VNG5073h one-of-top-five-correct: 0.227116433865659 CThresh: 2.473714 100 best_is: cluster11 VNG5073h cluster00 -> 1jud01 5.0308228 145 / 48 conP: 0.083 CATH-ID: 3.40.50.1000 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG5073h cluster01 -> 1fafA0 5.7383489 79 / 48 conP: 0.225 CATH-ID: 1.20.15.80 Large t antigen. Chain: a. Fragment: n-terminal domain. Engineered: ye VNG5073h cluster02 -> 1fioA0 5.5025069 190 / 48 conP: 0.051 CATH-ID: 1.20.1050.30 Sso1 protein. Chain: a. Fragment: cytoplasmic domain. Engineered: yes. VNG5073h cluster03 -> 1qc7A0 5.5025069 101 / 48 conP: 0.165 CATH-ID: 1.10.220.30 Flig. Chain: a, b. Fragment: flig-c. Engineered: yes VNG5073h cluster04 -> 1qsaA1 4.8301490 363 / 48 conP: 0.004 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG5073h cluster11 -> 1cf7B0 5.9741910 82 / 48 conP: 0.230 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En --end-- VNG50740 one-of-top-five-correct: 0.284629886347018 CThresh: 5.194363 75 best_is: cluster14 VNG50740 cluster00 -> 1a8vA1 5.6882556 49 / 78 conP: 0.280 CATH-ID: 1.10.720.10 Transcription termination factor rho. Chain: a, b. Fragment: RNA-bindi VNG50740 cluster01 -> 1cei00 5.3031529 85 / 78 conP: 0.201 CATH-ID: 1.10.1200.20 Colicin e7 immunity protein. Chain: null. Synonym: imme7 VNG50740 cluster02 -> 1k94A 7.0786897 165 / 78 conP: 0.170 NO-CATH VNG50740 cluster03 -> 2tct01 6.0205931 65 / 78 conP: 0.270 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG50740 cluster04 -> 1akhB0 5.5807283 78 / 78 conP: 0.225 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei VNG50740 cluster14 -> 2ezh00 7.3545542 65 / 78 conP: 0.352 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: igamma subdomain, residues 174 - 2 --end-- VNG5075c one-of-top-five-correct: 0.490985884439475 CThresh: 5.195386 75 best_is: cluster05 VNG5075c cluster00 -> 1ku3A 7.0962909 61 / 133 conP: 0.488 NO-CATH VNG5075c cluster01 -> 1bia01 7.0121161 64 / 133 conP: 0.478 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG5075c cluster02 -> 1bia01 7.4449098 64 / 133 conP: 0.509 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG5075c cluster03 -> 1smtB0 7.7234028 101 / 133 conP: 0.481 CATH-ID: 1.10.10.10 Transcriptional repressor smtb. Chain: a, b. Engineered: yes. Biologic VNG5075c cluster04 -> 1qgpA0 6.9415989 76 / 133 conP: 0.457 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d VNG5075c cluster05 -> 1bia01 8.5268940 64 / 133 conP: 0.586 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG5080h one-of-top-five-correct: 0.260043889755958 CThresh: 6.993950 26 best_is: cluster19 VNG5080h cluster00 -> 1cjwA0 6.1335139 166 / 82 conP: 0.102 CATH-ID: 3.40.630.30 Serotonin n-acetyltransferase. Chain: a. Engineered: yes. Biological_u VNG5080h cluster01 -> 2hhmA2 5.6703756 124 / 82 conP: 0.125 CATH-ID: 3.40.191.10 Human inositol monophosphatase dimer complex with gadolinium and sulfa VNG5080h cluster02 -> 1jv4A 7.3086429 157 / 82 conP: 0.147 NO-CATH VNG5080h cluster03 -> 1preA2 5.1295911 173 / 82 conP: 0.074 CATH-ID: 3.30.412.10 Proaerolysin. Chain: a, b. Engineered: yes VNG5080h cluster04 -> 1qd6C0 6.3577529 240 / 82 conP: 0.061 CATH-ID: 2.40.230.10 Outer membrane phospholipase (ompla). Chain: a, b. Fragment: resdiues VNG5080h cluster19 -> 1bw0A2 7.7397903 253 / 82 conP: 0.079 CATH-ID: 3.40.640.10 Tyrosine aminotransferase. Chain: a, b. Synonym: tat. Ec: 2.6.1.5 --end-- VNG5081h one-of-top-five-correct: 0.272156886230818 CThresh: 9.833050 25 best_is: cluster03 VNG5081h cluster00 -> 1exnA1 4.4474687 79 / 125 conP: 0.116 CATH-ID: 1.10.150.20 5'-exonuclease. Chain: a, b. Synonym: 5'-nuclease. 5'-3' exonuclease. VNG5081h cluster01 -> 1hwxA1 6.2867313 51 / 125 conP: 0.206 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG5081h cluster02 -> 1bco01 4.8375528 222 / 125 conP: 0.062 CATH-ID: 3.30.420.10 Bacteriophage mu transposase. Chain: null. Domain: core (residues 248 VNG5081h cluster03 -> 1bs2A2 8.2180455 125 / 125 conP: 0.230 CATH-ID: 1.20.1010.10 Arginyl-tRNA synthetase. Chain: a. Synonym: argrs, arginine - tRNA lig VNG5081h cluster04 -> 1moq01 5.3078843 218 / 125 conP: 0.071 CATH-ID: 3.40.50.1940 Glucosamine 6-phosphate synthase. Chain: null. Synonym: l-glutamine\:d --end-- VNG50822 one-of-top-five-correct: 0.45583298861359 CThresh: 2.270010 100 best_is: cluster01 VNG50822 cluster00 -> 1evyA 7.2285129 346 / 64 conP: 0.036 NO-CATH VNG50822 cluster01 -> 1qqiA0 8.3851769 104 / 64 conP: 0.425 CATH-ID: 1.10.10.10 Phosphate regulon transcriptional regulatory protein phob. Chain: a. F VNG50822 cluster02 -> 2pgd02 6.8438121 255 / 64 conP: 0.083 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase (6-pgdh) VNG50822 cluster03 -> 1dnpA3 7.1277634 181 / 64 conP: 0.182 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG50822 cluster04 -> 1d8bA0 6.4253092 81 / 64 conP: 0.351 CATH-ID: 1.10.150.80 Sgs1 recq helicase. Chain: a. Fragment: hrdc domain. Engineered: yes --end-- VNG5083h one-of-top-five-correct: 0.162201787712292 CThresh: 1.592088 100 best_is: cluster08 VNG5083h cluster00 -> 1b3qA2 4.7280758 174 / 35 conP: 0.023 CATH-ID: 3.30.565.20 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG5083h cluster01 -> 1bi2B1 4.7280758 73 / 35 conP: 0.152 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG5083h cluster02 -> 1a81A2 4.7280758 45 / 35 conP: 0.238 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG5083h cluster03 -> 1dnyA0 4.7280758 76 / 35 conP: 0.144 CATH-ID: 1.10.1200.10 Non-ribosomal peptide synthetase peptidyl carrier protein. Chain: a. F VNG5083h cluster04 -> 1a81A2 4.7280758 45 / 35 conP: 0.238 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG5083h cluster08 -> 1a5t03 4.7280758 116 / 35 conP: 0.070 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u --end-- VNG50870 one-of-top-five-correct: 0.192467907969945 CThresh: 7.851812 25 best_is: cluster14 VNG50870 cluster00 -> 1dt6A0 4.3972874 449 / 96 conP: 0.010 CATH-ID: 1.10.630.10 Cytochrome p450 2c5. Chain: a. Fragment: cyp2c5 with membrane spanning VNG50870 cluster01 -> 1a1w00 4.8247857 83 / 96 conP: 0.137 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG50870 cluster02 -> 1i6kA 4.7147663 316 / 96 conP: 0.027 NO-CATH VNG50870 cluster03 -> 1hb6A 4.4817321 86 / 96 conP: 0.123 NO-CATH VNG50870 cluster04 -> 1di1A0 5.0264283 290 / 96 conP: 0.036 CATH-ID: 1.10.615.10 Aristolochene synthase. Chain: a, b. Synonym: sesquiterpene cyclase, a VNG50870 cluster14 -> 1d2fA1 6.7470235 118 / 96 conP: 0.177 CATH-ID: 3.30.70.160 Maly protein. Chain: a, b. Engineered: yes --end-- VNG50872 one-of-top-five-correct: 0.501135185669625 CThresh: 4.402419 75 best_is: cluster08 VNG50872 cluster00 -> 2tpt01 8.0534405 107 / 92 conP: 0.410 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG50872 cluster01 -> 2tpt01 7.1359620 107 / 92 conP: 0.348 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG50872 cluster02 -> 2tpt01 7.9522305 107 / 92 conP: 0.403 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG50872 cluster03 -> 1qdbA 6.2619914 473 / 92 conP: 0.025 NO-CATH VNG50872 cluster04 -> 1e68A0 6.5382297 70 / 92 conP: 0.373 CATH-ID: 1.20.225.10 Bacteriocin as-48. Chain: a. Fragment: bacteriocin as-48 residue 36-10 VNG50872 cluster08 -> 1he8A3 9.2120096 111 / 92 conP: 0.485 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony --end-- VNG5088h one-of-top-five-correct: 0.269272116936994 CThresh: 9.158993 25 best_is: cluster19 VNG5088h cluster00 -> 1ytfB0 6.5591408 46 / 138 conP: 0.274 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5088h cluster01 -> 1ytfB0 6.0814600 46 / 138 conP: 0.247 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5088h cluster02 -> 1ytfB0 6.0814600 46 / 138 conP: 0.247 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5088h cluster03 -> 1ytfB0 6.3203004 46 / 138 conP: 0.260 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5088h cluster04 -> 1ytfB0 6.5591408 46 / 138 conP: 0.274 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5088h cluster19 -> 14psA0 7.5763376 226 / 138 conP: 0.168 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un --end-- VNG50911 one-of-top-five-correct: 0.255554563004491 CThresh: 7.823555 25 best_is: cluster13 VNG50911 cluster00 -> 1krjA 5.8865609 294 / 116 conP: 0.072 NO-CATH VNG50911 cluster01 -> 1pbv02 7.1235810 113 / 116 conP: 0.248 CATH-ID: 1.10.1000.11 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: VNG50911 cluster02 -> 1beo00 4.9979673 98 / 116 conP: 0.163 CATH-ID: 1.10.239.10 Beta-cryptogein. Chain: null. Synonym: beta-elicitin of phytophthora c VNG50911 cluster03 -> 1bw6A0 5.5958156 56 / 116 conP: 0.230 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer VNG50911 cluster04 -> 1bw6A0 6.7220384 56 / 116 conP: 0.293 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer VNG50911 cluster13 -> 1enh00 7.2775994 54 / 116 conP: 0.330 CATH-ID: 1.10.10.60 Engrailed homeodomain --end-- VNG50930 one-of-top-five-correct: 0.236050889083533 CThresh: 4.741202 75 best_is: cluster16 VNG50930 cluster00 -> 1preA2 5.0297661 173 / 65 conP: 0.073 CATH-ID: 3.30.412.10 Proaerolysin. Chain: a, b. Engineered: yes VNG50930 cluster01 -> 1lehA2 5.8913239 203 / 65 conP: 0.068 CATH-ID: 3.40.50.720 Leucine dehydrogenase. Chain: a, b. Biological_unit: octamer VNG50930 cluster02 -> 1av401 5.8913239 87 / 65 conP: 0.202 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG50930 cluster03 -> 1gcyA2 5.5125434 56 / 65 conP: 0.241 CATH-ID: 2.60.40.1180 Glucan 1,4-alpha-maltotetrahydrolase. Chain: a. Engineered: yes VNG50930 cluster04 -> 1g6wA1 6.3221028 97 / 65 conP: 0.205 CATH-ID: 3.40.30.10 Ure2 protein. Chain: a, b, c, d. Fragment: globular domain (residues 9 VNG50930 cluster16 -> 1az902 6.7528817 266 / 65 conP: 0.045 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet --end-- VNG50931 one-of-top-five-correct: 0.264243177646011 CThresh: 4.979259 75 best_is: cluster19 VNG50931 cluster00 -> 1igd00 5.3550478 61 / 78 conP: 0.249 CATH-ID: 3.10.20.10 Protein g VNG50931 cluster01 -> 1vzv00 6.0594342 211 / 78 conP: 0.096 CATH-ID: 3.20.16.10 Varicella-zoster virus protease. Chain: null. Fragment: residues 10 - VNG50931 cluster02 -> 1vdeA3 5.6729257 109 / 78 conP: 0.191 CATH-ID: 3.10.28.10 Pi-scei. Chain: a, b. Engineered: yes VNG50931 cluster03 -> 1a5r00 5.9776457 103 / 78 conP: 0.214 CATH-ID: 3.10.20.40 Sumo-1. Chain: null. Synonym: pic1, gmp1, ubl1, sentrin. Engineered: y VNG50931 cluster04 -> 1fnf01 5.7644699 94 / 78 conP: 0.218 CATH-ID: 2.60.40.30 Fibronectin. Chain: null. Domain: 368 amino acid fragment encompassing VNG50931 cluster19 -> 1fnf01 6.9766226 94 / 78 conP: 0.283 CATH-ID: 2.60.40.30 Fibronectin. Chain: null. Domain: 368 amino acid fragment encompassing --end-- VNG5096h one-of-top-five-correct: 0.435700535570036 CThresh: 2.479861 100 best_is: cluster10 VNG5096h cluster00 -> 1vin01 7.1396865 139 / 66 conP: 0.263 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG5096h cluster01 -> 1vin01 6.2820806 139 / 66 conP: 0.218 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG5096h cluster02 -> 1bu2A2 6.7108836 102 / 66 conP: 0.318 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG5096h cluster03 -> 1guxB0 6.4744027 141 / 66 conP: 0.224 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG5096h cluster04 -> 1efuB2 6.2820806 86 / 66 conP: 0.328 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran VNG5096h cluster10 -> 1psrA0 8.2116939 100 / 66 conP: 0.424 CATH-ID: 1.10.238.10 Psoriasin. Chain: a, b. Synonym: s100a7. Engineered: yes. Other_detail --end-- VNG5097h one-of-top-five-correct: 0.234425777954566 CThresh: 6.497239 75 best_is: cluster18 VNG5097h cluster00 -> 1ixmA1 6.0499227 59 / 82 conP: 0.236 CATH-ID: 1.20.15.100 Sporulation response regulatory protein. Chain: a, b. Synonym: spo0b. VNG5097h cluster01 -> 1vhbA0 6.5350830 135 / 82 conP: 0.157 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a, b. Synonym: soluble cytochrome o. Engineered: ye VNG5097h cluster02 -> 1fjgT0 5.6703756 99 / 82 conP: 0.165 CATH-TRUNC VNG5097h cluster03 -> 1lki00 6.9366521 172 / 82 conP: 0.132 CATH-ID: 1.20.120.200 Leukemia inhibitory factor (lif) VNG5097h cluster04 -> 1b3jA1 5.3303757 170 / 82 conP: 0.089 CATH-ID: 3.30.500.10 Mhc class i homolog mic-a. Chain: a. Fragment: extracellular domain, r VNG5097h cluster18 -> 1h4uA 7.1374366 245 / 82 conP: 0.080 NO-CATH --end-- VNG51002 one-of-top-five-correct: 0.389280944372659 CThresh: 6.955206 75 best_is: cluster19 VNG51002 cluster00 -> 1k8tA 8.2085428 498 / 110 conP: 0.042 NO-CATH VNG51002 cluster01 -> 1kqbA 7.2457504 216 / 110 conP: 0.166 NO-CATH VNG51002 cluster02 -> 2ng101 7.4042170 89 / 110 conP: 0.319 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG51002 cluster03 -> 1eg3A3 8.1413594 82 / 110 conP: 0.377 CATH-ID: 1.10.238.60 Dystrophin. Chain: a. Fragment: ww domain. Engineered: yes VNG51002 cluster04 -> 2ccyA0 8.3050324 127 / 110 conP: 0.323 CATH-ID: 1.20.120.10 Cytochrome c(prime) VNG51002 cluster19 -> 1qkrA0 8.7146055 172 / 110 conP: 0.287 CATH-ID: 1.20.120.230 Vinculin. Chain: a, b. Fragment: c-terminal domain. Synonym: tail doma --end-- VNG5101h one-of-top-five-correct: 0.361642479029944 CThresh: 2.457761 100 best_is: cluster09 VNG5101h cluster00 -> 1bu2A2 6.7108836 102 / 66 conP: 0.319 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG5101h cluster01 -> 1c9bA2 6.7108836 106 / 66 conP: 0.310 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG5101h cluster02 -> 1bu2A2 6.7108836 102 / 66 conP: 0.319 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG5101h cluster03 -> 1c9bA2 6.7108836 106 / 66 conP: 0.310 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG5101h cluster04 -> 1fnnA1 6.3551625 101 / 66 conP: 0.300 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG5101h cluster09 -> 1psrA0 7.3540880 100 / 66 conP: 0.366 CATH-ID: 1.10.238.10 Psoriasin. Chain: a, b. Synonym: s100a7. Engineered: yes. Other_detail --end-- VNG5108h one-of-top-five-correct: 0.349482779727895 CThresh: 5.385248 75 best_is: cluster14 VNG5108h cluster00 -> 1d1dA1 6.9594685 140 / 88 conP: 0.226 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG5108h cluster01 -> 1bxrA5 5.1674443 258 / 88 conP: 0.064 CATH-ID: 3.30.470.20 Carbamoyl-phosphate synthase. Chain: a, b, c, d, e, f, g, h. Engineere VNG5108h cluster02 -> 1brrA0 6.7583493 230 / 88 conP: 0.119 CATH-ID: 1.20.85.10 Bacteriorhodopsin. Chain: a, b, c. Synonym: br. Other_details: schiff VNG5108h cluster03 -> 1e7aA4 7.0160320 86 / 88 conP: 0.314 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5108h cluster04 -> 1am300 6.1105595 70 / 88 conP: 0.286 CATH-ID: 1.10.1200.30 HIV capsid. Chain: null. Fragment: c-terminal domain, residues 151 - 2 VNG5108h cluster14 -> 1cf7B0 8.0354998 82 / 88 conP: 0.388 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En --end-- VNG5112h one-of-top-five-correct: 0.352599192250086 CThresh: 3.928905 75 best_is: cluster15 VNG5112h cluster00 -> 1qnf02 7.3686558 123 / 61 conP: 0.220 CATH-ID: 1.25.40.80 Photolyase. Chain: null. Synonym: DNA cyclobutane dipyrimidine photoly VNG5112h cluster01 -> 1b0pA3 6.2709434 212 / 61 conP: 0.069 CATH-ID: 3.40.920.10 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG5112h cluster02 -> 1b3uA0 4.9536884 588 / 61 conP: 0.001 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG5112h cluster03 -> 1lea00 5.4753703 72 / 61 conP: 0.227 CATH-ID: 1.10.10.10 Lexa repressor DNA binding domain (nmr, minimized average structure) VNG5112h cluster04 -> 1jli00 4.9536884 112 / 61 conP: 0.138 CATH-ID: 1.20.120.200 Interleukin 3. Chain: null. Synonym: multi-csf. Engineered: yes. Mutat VNG5112h cluster15 -> 2ng101 8.0272833 89 / 61 conP: 0.335 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp --end-- VNG51151 one-of-top-five-correct: 0.269181674726021 CThresh: 5.673079 75 best_is: cluster18 VNG51151 cluster00 -> 2scpA0 5.9535469 174 / 88 conP: 0.135 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein VNG51151 cluster01 -> 2bct00 6.1500725 502 / 88 conP: 0.012 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG51151 cluster02 -> 1jhgA0 5.9847285 101 / 88 conP: 0.220 CATH-ID: 1.10.1270.10 Trp operon repressor. Chain: a. Engineered: yes. Mutation: chain a, v5 VNG51151 cluster03 -> 1qrjB1 4.5778674 114 / 88 conP: 0.145 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG51151 cluster04 -> 1hbkA0 5.2962218 89 / 88 conP: 0.203 CATH-ID: 1.20.80.10 Acyl-coa binding protein. Chain: a. Synonym: acbp. Engineered: yes VNG51151 cluster18 -> 1bq7A0 7.1327007 186 / 88 conP: 0.167 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi --end-- VNG5118h one-of-top-five-correct: 0.323490554770227 CThresh: 7.405793 25 best_is: cluster06 VNG5118h cluster00 -> 1d2dA0 6.5142164 56 / 116 conP: 0.300 CATH-ID: 1.10.287.10 tRNA synthetase. Chain: a. Fragment: residue 1 - 59. Synonym: tRNA lig VNG5118h cluster01 -> 2sqcA2 6.1270873 272 / 116 conP: 0.094 CATH-ID: 1.50.10.70 Squalene-hopene cyclase. Chain: a, b. Engineered: yes. Mutation: d376c VNG5118h cluster02 -> 1jinA0 5.6469866 403 / 116 conP: 0.039 CATH-ID: 1.10.630.10 Cytochrome p450 107a1. Chain: a. Synonym: 6-deoxyerythronolide b hydro VNG5118h cluster03 -> 1uaaA4 4.7610461 162 / 116 conP: 0.120 CATH-ID: 1.10.486.10 Atp-dependent DNA helicase rep. Chain: a, b. Engineered: yes. DNA (5'- VNG5118h cluster04 -> 4crxA2 5.0783356 111 / 116 conP: 0.169 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG5118h cluster06 -> 1hfaA 7.9954422 263 / 116 conP: 0.158 NO-CATH --end-- VNG5120h one-of-top-five-correct: 0.203973611631416 CThresh: 2.284281 100 best_is: cluster00 VNG5120h cluster00 -> 191400 5.6954638 171 / 40 conP: 0.043 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG5120h cluster01 -> 191400 5.6954638 171 / 40 conP: 0.043 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG5120h cluster02 -> 1itg00 5.6954638 142 / 40 conP: 0.070 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant VNG5120h cluster03 -> 1asu00 5.4465578 162 / 40 conP: 0.047 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG5120h cluster04 -> 1jfrA0 5.4465578 260 / 40 conP: 0.009 CATH-ID: 3.40.50.950 Lipase. Chain: a, b. Engineered: yes --end-- VNG5123h one-of-top-five-correct: 0.700546217518099 CThresh: 6.134095 75 best_is: cluster11 VNG5123h cluster00 -> 1fapB0 11.126051 95 / 111 conP: 0.616 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG5123h cluster01 -> 1fapB0 6.9147992 95 / 111 conP: 0.323 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG5123h cluster02 -> 1d5aA5 7.9607224 54 / 111 conP: 0.455 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG5123h cluster03 -> 1fapB0 7.2988050 95 / 111 conP: 0.348 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG5123h cluster04 -> 1itf00 7.8453972 165 / 111 conP: 0.286 CATH-ID: 1.20.120.210 Interferon alpha-2a. Chain: null. Engineered: yes. Biological_unit: mo VNG5123h cluster11 -> 1itf00 11.878929 165 / 111 conP: 0.562 CATH-ID: 1.20.120.210 Interferon alpha-2a. Chain: null. Engineered: yes. Biological_unit: mo --end-- VNG5129h one-of-top-five-correct: 0.213709472561679 CThresh: 6.999014 73 best_is: cluster01 VNG5129h cluster00 -> 1amoA4 4.8826723 160 / 97 conP: 0.102 CATH-ID: 3.40.50.80 NADPH-cytochrome p450 reductase. Chain: a, b. Fragment: hydrophilic do VNG5129h cluster01 -> 1qi7A1 6.6970640 178 / 97 conP: 0.144 CATH-ID: 3.40.420.10 N-glycosidase. Chain: a. Ec: 3.2.2.22 VNG5129h cluster02 -> 1iibA0 4.7323346 103 / 97 conP: 0.141 CATH-ID: 3.40.50.270 Enzyme iib of the cellobiose-specific phosphotransferase system. Chain VNG5129h cluster03 -> 1cfyA0 5.0543187 133 / 97 conP: 0.127 CATH-ID: 3.40.20.10 Cofilin. Chain: a, b. Engineered: yes VNG5129h cluster04 -> 1legA 4.5945233 273 / 97 conP: 0.044 NO-CATH --end-- VNG5130h one-of-top-five-correct: 0.394560979250538 CThresh: 7.010973 25 best_is: cluster00 VNG5130h cluster00 -> 1ljwA 9.0054823 141 / 101 conP: 0.314 NO-CATH VNG5130h cluster01 -> 1c3uA3 7.7995067 82 / 101 conP: 0.327 CATH-ID: 1.10.164.30 Adenylosuccinate lyase. Chain: a, b. Engineered: yes VNG5130h cluster02 -> 1dceA1 5.9902321 317 / 101 conP: 0.054 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG5130h cluster03 -> 1bia01 4.9607436 64 / 101 conP: 0.196 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG5130h cluster04 -> 2yhx_ 5.6133258 457 / 101 conP: 0.019 NO-CATH --end-- VNG5135h one-of-top-five-correct: 0.208175896292137 CThresh: 10.180058 25 best_is: cluster03 VNG5135h cluster00 -> 1kdxA0 5.8933333 81 / 134 conP: 0.166 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG5135h cluster01 -> 1gln04 5.2666648 48 / 134 conP: 0.165 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG5135h cluster02 -> 1qmmA5 5.6865642 194 / 134 conP: 0.094 CATH-ID: 1.10.1070.11 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG5135h cluster03 -> 1az902 7.2061801 266 / 134 conP: 0.099 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet VNG5135h cluster04 -> 1kdxA0 6.6785375 81 / 134 conP: 0.199 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding --end-- VNG5137h one-of-top-five-correct: 0.387000872308074 CThresh: 4.420559 75 best_is: cluster02 VNG5137h cluster00 -> 1qi7A1 8.6318129 178 / 62 conP: 0.168 CATH-ID: 3.40.420.10 N-glycosidase. Chain: a. Ec: 3.2.2.22 VNG5137h cluster01 -> 1qc6A0 4.9177782 104 / 62 conP: 0.137 CATH-ID: 2.30.29.30 Evh1 domain from ena/vasp-like protein. Chain: a, b. Fragment: n-termi VNG5137h cluster02 -> 1apa01 8.6318129 177 / 62 conP: 0.169 CATH-ID: 3.40.420.10 Pokeweed antiviral protein (alpha) VNG5137h cluster03 -> 1chuA2 7.1880644 106 / 62 conP: 0.231 CATH-ID: 3.90.700.10 L-aspartate oxidase. Chain: a. Engineered: yes. Biological_unit: homod VNG5137h cluster04 -> 1es8A0 6.4470866 192 / 62 conP: 0.084 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes --end-- VNG51430 one-of-top-five-correct: 0.389903297601859 CThresh: 7.632142 25 best_is: cluster01 VNG51430 cluster00 -> 1qqnA4 6.8689594 84 / 117 conP: 0.278 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG51430 cluster01 -> 1kmeA 8.8693745 227 / 117 conP: 0.226 NO-CATH VNG51430 cluster02 -> 1ytfD1 6.6450636 53 / 117 conP: 0.303 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG51430 cluster03 -> 2sas00 7.0676066 185 / 117 conP: 0.182 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein (iso type ii) VNG51430 cluster04 -> 1h6pA 7.7883137 188 / 117 conP: 0.212 NO-CATH --end-- VNG5144h one-of-top-five-correct: 0.265325944097299 CThresh: 6.994953 69 best_is: cluster16 VNG5144h cluster00 -> 1djxB1 5.0848658 52 / 92 conP: 0.200 CATH-ID: 1.10.238.10 Phosphoinositide-specific phospholipasE C, isozyme delta1. Chain: a, b VNG5144h cluster01 -> 1jp6A 6.0361037 152 / 92 conP: 0.133 NO-CATH VNG5144h cluster02 -> 1ebmA3 5.4572366 126 / 92 conP: 0.137 CATH-ID: 1.10.340.10 8-oxoguanine DNA glycosylase. Chain: a. Fragment: core fragment (resid VNG5144h cluster03 -> 1bfmA0 4.6134779 69 / 92 conP: 0.161 CATH-ID: 1.10.20.10 Histone b. Chain: a, b. Synonym: hmfb, rhmfb, archaeal histone. Engine VNG5144h cluster04 -> 1ebmA3 5.4572366 126 / 92 conP: 0.137 CATH-ID: 1.10.340.10 8-oxoguanine DNA glycosylase. Chain: a. Fragment: core fragment (resid VNG5144h cluster16 -> 1ktpA 7.5872015 162 / 92 conP: 0.182 NO-CATH --end-- VNG5145h one-of-top-five-correct: 0.310014942631949 CThresh: 8.089774 25 best_is: cluster02 VNG5145h cluster00 -> 1a6q02 5.9550050 69 / 132 conP: 0.253 CATH-ID: 1.10.920.10 Phosphatase 2c. Chain: null. Engineered: yes VNG5145h cluster01 -> 1ala01 6.6461605 73 / 132 conP: 0.288 CATH-ID: 1.10.220.10 Annexin v VNG5145h cluster02 -> 1cz1A0 7.7708323 394 / 132 conP: 0.093 CATH-ID: 3.20.20.80 Exo-b-(1,3)-glucanase. Chain: a. Engineered: yes VNG5145h cluster03 -> 256bA0 7.0501061 106 / 132 conP: 0.276 CATH-ID: 1.20.120.10 Cytochrome b562 (oxidized) VNG5145h cluster04 -> 1gcb_ 6.2080467 452 / 132 conP: 0.046 NO-CATH --end-- VNG5150h one-of-top-five-correct: 0.319829111752719 CThresh: 6.678030 75 best_is: cluster00 VNG5150h cluster00 -> 2a3dA0 8.1887157 73 / 91 conP: 0.356 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG5150h cluster01 -> 1eswA0 6.0639824 500 / 91 conP: 0.011 CATH-ID: 3.20.20.80 Amylomaltase. Chain: a. Engineered: yes VNG5150h cluster02 -> 1ax800 6.5128832 130 / 91 conP: 0.180 CATH-ID: 1.20.120.200 Obesity protein. Chain: null. Synonym: leptin. Engineered: yes. Mutati VNG5150h cluster03 -> 1fjgB1 6.8421140 175 / 91 conP: 0.146 CATH-TRUNC VNG5150h cluster04 -> 1eemA2 6.6475811 115 / 91 conP: 0.204 CATH-ID: 1.20.1050.10 Glutathione-s-transferase. Chain: a. Engineered: yes --end-- VNG5152h one-of-top-five-correct: 0.405485015585395 CThresh: 7.572412 25 best_is: cluster13 VNG5152h cluster00 -> 1f16A0 7.0282046 192 / 113 conP: 0.167 CATH-ID: 1.10.437.10 Apoptosis regulator bax, membrane isoform alpha. Chain: a. Engineered: VNG5152h cluster01 -> 1hp800 6.4018932 68 / 113 conP: 0.265 CATH-ID: 1.10.810.10 Hu-p8. Chain: null. Engineered: synthetic gene. Mutation: n-terminal i VNG5152h cluster02 -> 1e7aA3 8.1688631 92 / 113 conP: 0.341 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5152h cluster03 -> 1rthA2 6.6348992 94 / 113 conP: 0.247 CATH-ID: 3.30.70.270 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere VNG5152h cluster04 -> 1e7aA6 6.9527953 78 / 113 conP: 0.284 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5152h cluster13 -> 1mroA3 9.1114647 227 / 113 conP: 0.227 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: --end-- VNG5156h one-of-top-five-correct: 0.468110304852846 CThresh: 7.380943 25 best_is: cluster02 VNG5156h cluster00 -> 1ecl02 7.5838897 166 / 129 conP: 0.267 CATH-ID: 1.10.460.10 Escherichia coli topoisomerase i. Domain: amino-terminal 67kda. Synony VNG5156h cluster01 -> 1bi2B1 7.9443656 73 / 129 conP: 0.401 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG5156h cluster02 -> 1bi2B1 9.3581913 73 / 129 conP: 0.502 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG5156h cluster03 -> 1bi2B1 8.5502909 73 / 129 conP: 0.444 CATH-ID: 1.10.10.10 Diphtheria toxin repressor. Chain: a, b. Synonym: dtxr. Engineered: ye VNG5156h cluster04 -> 1pdnC1 6.2043306 68 / 129 conP: 0.294 CATH-ID: 1.10.10.10 Prd paired domain. Chain: c. DNA. Chain: a, b --end-- VNG5157h one-of-top-five-correct: 0.373000310150798 CThresh: 6.988706 40 best_is: cluster18 VNG5157h cluster00 -> 1e68A0 5.7125884 70 / 98 conP: 0.219 CATH-ID: 1.20.225.10 Bacteriocin as-48. Chain: a. Fragment: bacteriocin as-48 residue 36-10 VNG5157h cluster01 -> 1e7aA5 6.7356387 112 / 98 conP: 0.219 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5157h cluster02 -> 1ocrE0 6.1426883 109 / 98 conP: 0.194 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG5157h cluster03 -> 1cuk02 5.2486319 76 / 98 conP: 0.191 CATH-ID: 1.10.150.30 Ruva protein. Chain: null. Engineered: yes VNG5157h cluster04 -> 1pprM1 6.4830653 155 / 98 conP: 0.161 CATH-ID: 1.40.10.10 Peridinin-chlorophyll protein. Chain: m, n, o. Synonym: pcp VNG5157h cluster18 -> 1bmtA1 8.8140661 87 / 98 conP: 0.378 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) --end-- VNG5166h one-of-top-five-correct: 0.256299809510144 CThresh: 6.721954 75 best_is: cluster11 VNG5166h cluster00 -> 2rig_ 4.2941022 119 / 69 conP: 0.074 NO-CATH VNG5166h cluster01 -> 1rgp00 6.8011957 189 / 69 conP: 0.075 CATH-ID: 1.10.555.10 Rhogap. Chain: null. Fragment: gtpase activation domain. Synonym: cdc4 VNG5166h cluster02 -> 1cokA0 4.5361166 68 / 69 conP: 0.126 CATH-ID: 1.10.150.50 Second splice variant p73. Chain: a. Fragment: c-terminal domain. Engi VNG5166h cluster03 -> 1gdz00 5.7434573 151 / 69 conP: 0.081 CATH-ID: 1.10.375.10 Human immunodeficiency virus type 1 capsid protein. Chain: null. Fragm VNG5166h cluster04 -> 1d3yA1 3.9091166 71 / 69 conP: 0.105 CATH-ID: 1.10.10.10 DNA topoisomerase vi a subunit. Chain: a, b. Fragment: DNA binding cor VNG5166h cluster11 -> 1uby00 7.8589341 348 / 69 conP: 0.021 CATH-ID: 1.10.600.10 Farnesyl diphosphate synthase. Chain: null. Synonym: fps. Engineered: --end-- VNG5167h one-of-top-five-correct: 0.179331896464385 CThresh: 3.804946 75 best_is: cluster16 VNG5167h cluster00 -> 1qsaA1 4.8404969 363 / 47 conP: 0.002 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG5167h cluster01 -> 1c20A0 5.3151396 128 / 47 conP: 0.082 CATH-ID: 1.10.1260.10 Dead ringer protein. Chain: a. Fragment: DNA-binding domain. Engineere VNG5167h cluster02 -> 1ahjB1 5.0778183 110 / 47 conP: 0.098 CATH-ID: 1.10.472.20 Nitrile hydratase. Chain: a, b, c, d, e, f, g, h. Biological_unit: het VNG5167h cluster03 -> 1kpmA 4.8404969 121 / 47 conP: 0.079 NO-CATH VNG5167h cluster04 -> 1buoA0 5.3194486 121 / 47 conP: 0.090 CATH-ID: 3.30.710.10 Promyelocytic leukemia zinc finger protein plzf. Chain: a. Fragment: b VNG5167h cluster16 -> 1c5a00 5.7897824 65 / 47 conP: 0.207 CATH-ID: 1.20.91.20 Des-arg==74==-complement c5a --end-- VNG51702 one-of-top-five-correct: 0.413898217068421 CThresh: 2.492376 100 best_is: cluster13 VNG51702 cluster00 -> 2pgd02 6.9410604 255 / 67 conP: 0.093 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase (6-pgdh) VNG51702 cluster01 -> 1sctA0 6.4562639 149 / 67 conP: 0.213 CATH-ID: 1.10.490.10 Hemoglobin. Heterogen: carbon monoxide VNG51702 cluster02 -> 1ash00 7.3988883 147 / 67 conP: 0.266 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG51702 cluster03 -> 1mhdA0 6.3428811 123 / 67 conP: 0.256 CATH-ID: 3.90.520.10 Smad3. Chain: a, b. Fragment: mh1 domain, residues 1 - 144. Synonym: s VNG51702 cluster04 -> 1evyA 7.3099929 346 / 67 conP: 0.042 NO-CATH VNG51702 cluster13 -> 1dceA1 7.9502897 317 / 67 conP: 0.067 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg --end-- VNG5173h one-of-top-five-correct: 0.296440241983728 CThresh: 3.336178 75 best_is: cluster02 VNG5173h cluster00 -> 2ts102 5.9226563 96 / 49 conP: 0.170 CATH-ID: 1.10.240.10 Tyrosyl-transfer RNA synthetase VNG5173h cluster01 -> 1bli01 7.3290605 292 / 49 conP: 0.018 CATH-ID: 3.20.20.80 Alpha-amylase. Chain: null. Synonym: glucanotransferase, alpha-1,4-glu VNG5173h cluster02 -> 1b6400 7.3290605 91 / 49 conP: 0.248 CATH-ID: 3.30.70.60 Elongation factor 1-beta. Chain: null. Fragment: guanine exchange fact VNG5173h cluster03 -> 1bmqA0 6.3914577 167 / 49 conP: 0.078 CATH-ID: 3.40.50.1460 Interleukin-1 beta convertase. Chain: a. Synonym: ice, il-1beta conver VNG5173h cluster04 -> 1e8gA3 6.1570570 231 / 49 conP: 0.031 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, --end-- VNG5175h one-of-top-five-correct: 0.155272166315764 CThresh: 2.872128 100 best_is: cluster08 VNG5175h cluster00 -> 1fgs02 5.1209701 70 / 37 conP: 0.148 CATH-ID: 3.30.790.10 Folylpolyglutamate synthetase. Chain: null. Synonym: fpgs. Engineered: VNG5175h cluster01 -> 1acf00 5.1209701 125 / 37 conP: 0.058 CATH-ID: 3.30.450.30 Profilin i VNG5175h cluster02 -> 1c9fA0 5.1209701 87 / 37 conP: 0.112 CATH-ID: 3.10.20.140 Caspase-activated dnase. Chain: a. Fragment: n-terminal domain, residu VNG5175h cluster03 -> 1f0xA4 5.1209701 85 / 37 conP: 0.116 CATH-ID: 3.30.70.760 D-lactate dehydrogenase. Chain: a, b. Synonym: dldh. Engineered: yes VNG5175h cluster04 -> 3pte00 5.1209701 347 / 37 conP: 0.001 CATH-ID: 3.40.710.10 D-alanyl-d-alanine carboxypeptidase/transpeptidase VNG5175h cluster08 -> 1a0oF0 5.1209701 69 / 37 conP: 0.151 CATH-ID: 3.30.70.400 Chey. Chain: a, c, e, g. Engineered: yes. Chea. Chain: b, d, f, h. Fra --end-- VNG51772 one-of-top-five-correct: 0.395321565571885 CThresh: 5.216776 75 best_is: cluster12 VNG51772 cluster00 -> 1fbxA2 4.9771343 136 / 80 conP: 0.131 CATH-ID: 3.50.11.20 Gtp cyclohydrolase i. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG51772 cluster01 -> 1qhkA0 5.0778183 47 / 80 conP: 0.252 CATH-ID: 3.40.970.10 Ribonuclease hi. Chain: a. Fragment: n-terminal domain. Synonym: rnase VNG51772 cluster02 -> 1fts01 5.8148129 84 / 80 conP: 0.232 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG51772 cluster03 -> 1utg00 7.6927181 70 / 80 conP: 0.370 CATH-ID: 1.10.210.10 Uteroglobin (oxidized) VNG51772 cluster04 -> 1efvB0 5.5040844 252 / 80 conP: 0.060 CATH-ID: 3.40.50.1120 Electron transfer flavoprotein. Chain: a, b. Synonym: etf, hetf, elect VNG51772 cluster12 -> 1fts01 8.6786869 84 / 80 conP: 0.408 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: --end-- VNG5178h one-of-top-five-correct: 0.41914106364381 CThresh: 2.234538 100 best_is: cluster01 VNG5178h cluster00 -> 1he8A3 6.9698151 111 / 54 conP: 0.255 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony VNG5178h cluster01 -> 1ayx00 8.1884300 492 / 54 conP: 0.003 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes VNG5178h cluster02 -> 5eat02 6.1390610 371 / 54 conP: 0.009 CATH-ID: 1.10.615.10 5-epi-aristolochene synthase. Chain: null. Synonym: 5-epi-aristolochen VNG5178h cluster03 -> 1ala01 7.7330147 73 / 54 conP: 0.411 CATH-ID: 1.10.220.10 Annexin v VNG5178h cluster04 -> 5eat02 5.9113534 371 / 54 conP: 0.009 CATH-ID: 1.10.615.10 5-epi-aristolochene synthase. Chain: null. Synonym: 5-epi-aristolochen --end-- VNG5186h one-of-top-five-correct: 0.236729386187867 CThresh: 7.055174 25 best_is: cluster13 VNG5186h cluster00 -> 1cex00 5.6160138 197 / 95 conP: 0.092 CATH-ID: 3.40.50.950 Cutinase. Chain: null. Engineered: yes VNG5186h cluster01 -> 1ezkA0 4.8027677 149 / 95 conP: 0.103 CATH-ID: 3.40.30.10 Tryparedoxin i. Chain: a. Engineered: yes. Other_details: c-terminal h VNG5186h cluster02 -> 1acp00 5.0293708 77 / 95 conP: 0.172 CATH-ID: 1.10.1200.10 Acyl carrier protein (nmr, 2 structures) VNG5186h cluster03 -> 1acp00 5.3895366 77 / 95 conP: 0.188 CATH-ID: 1.10.1200.10 Acyl carrier protein (nmr, 2 structures) VNG5186h cluster04 -> 1d0iA0 5.9547849 150 / 95 conP: 0.137 CATH-ID: 3.40.50.9100 Type ii 3-dehydroquinate hydratase. Chain: a, b, c, d, e, f, g, h, i, VNG5186h cluster13 -> 1es8A0 7.1294701 192 / 95 conP: 0.141 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes --end-- VNG5189h one-of-top-five-correct: 0.703123247266635 CThresh: 4.709022 75 best_is: cluster06 VNG5189h cluster00 -> 1d2dA0 6.1366280 56 / 99 conP: 0.373 CATH-ID: 1.10.287.10 tRNA synthetase. Chain: a. Fragment: residue 1 - 59. Synonym: tRNA lig VNG5189h cluster01 -> 1fapB0 8.4381931 95 / 99 conP: 0.467 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG5189h cluster02 -> 1fapB0 9.8316482 95 / 99 conP: 0.567 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG5189h cluster03 -> 1c07A0 6.4328810 95 / 99 conP: 0.329 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm VNG5189h cluster04 -> 1elrA0 7.4199314 128 / 99 conP: 0.341 CATH-ID: 1.25.40.10 Tpr2a-domain of hop. Chain: a. Fragment: middle domain. Engineered: ye VNG5189h cluster06 -> 1ile01 11.539601 254 / 99 conP: 0.410 CATH-ID: 1.10.730.10 Isoleucyl-tRNA synthetase. Chain: null. Synonym: ilers. Engineered: cl --end-- VNG5192h one-of-top-five-correct: 0.390822753438531 CThresh: 2.306214 100 best_is: cluster18 VNG5192h cluster00 -> 1bqv00 6.2709434 110 / 61 conP: 0.256 CATH-ID: 1.20.800.10 Ets-1. Chain: null. Fragment: pointed domain and map kinase phosphoryl VNG5192h cluster01 -> 1ab402 7.1491133 86 / 61 conP: 0.369 CATH-ID: 3.30.70.220 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol VNG5192h cluster02 -> 1afi00 5.6872981 72 / 61 conP: 0.311 CATH-ID: 3.30.70.100 Merp. Chain: null. Synonym: mercuric transport protein. Engineered: me VNG5192h cluster03 -> 1ab402 6.4904859 86 / 61 conP: 0.326 CATH-ID: 3.30.70.220 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol VNG5192h cluster04 -> 1ab402 7.5881983 86 / 61 conP: 0.399 CATH-ID: 3.30.70.220 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol VNG5192h cluster18 -> 1ab402 7.7397297 86 / 61 conP: 0.410 CATH-ID: 3.30.70.220 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol --end-- VNG51941 one-of-top-five-correct: 0.454732002484518 CThresh: 5.330453 75 best_is: cluster19 VNG51941 cluster00 -> 1gx3B 6.6990729 274 / 93 conP: 0.099 NO-CATH VNG51941 cluster01 -> 1bj700 7.3613707 150 / 93 conP: 0.253 CATH-ID: 2.40.128.20 D 2. Chain: null. Synonym: dander major allergen bda20, dermal allerge VNG51941 cluster02 -> 1jjuA 7.5740508 489 / 93 conP: 0.027 NO-CATH VNG51941 cluster03 -> 1avdA0 8.3276230 123 / 93 conP: 0.354 CATH-ID: 2.40.128.30 Avidin complex with biotin VNG51941 cluster04 -> 1np1A0 8.2334922 184 / 93 conP: 0.252 CATH-ID: 2.40.128.20 Nitrophorin 1. Chain: a, b. Synonym: np1. Engineered: yes. Biological_ VNG51941 cluster19 -> 1dim00 9.1006249 381 / 93 conP: 0.090 CATH-ID: 2.120.10.10 Sialidase. Chain: null. Engineered: yes --end-- VNG5198h one-of-top-five-correct: 0.397629613184164 CThresh: 2.480373 100 best_is: cluster10 VNG5198h cluster00 -> 1bq7A0 6.5929713 186 / 66 conP: 0.156 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG5198h cluster01 -> 1dik05 6.9252851 89 / 66 conP: 0.363 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG5198h cluster02 -> 1bu2A2 6.2820806 102 / 66 conP: 0.292 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG5198h cluster03 -> 1guxB0 6.9252851 141 / 66 conP: 0.247 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG5198h cluster04 -> 2hmqA0 6.9252851 113 / 66 conP: 0.306 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG5198h cluster10 -> 1fnnA1 7.7828909 101 / 66 conP: 0.391 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer --end-- VNG5199h one-of-top-five-correct: 0.192505016761564 CThresh: 9.374066 25 best_is: cluster15 VNG5199h cluster00 -> 1ad600 5.2240839 185 / 133 conP: 0.101 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG5199h cluster01 -> 1bgw01 4.1579572 43 / 133 conP: 0.149 CATH-ID: 2.30.35.40 Topoisomerase. Chain: null. Fragment: residues 410 - 1202. Engineered: VNG5199h cluster02 -> 1kdxA0 5.1921525 81 / 133 conP: 0.162 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG5199h cluster03 -> 1otfA0 4.5843346 59 / 133 conP: 0.154 CATH-ID: 3.30.69.10 4-oxalocrotonate tautomerase. Chain: a, b, c, d, e, f. Synonym: 4-oxal VNG5199h cluster04 -> 1pjcA2 5.2732476 176 / 133 conP: 0.107 CATH-ID: 3.40.50.720 L-alanine dehydrogenase. Chain: a. Engineered: yes. Biological_unit: h VNG5199h cluster15 -> 2hdhA1 6.5955304 193 / 133 conP: 0.138 CATH-ID: 3.40.50.720 L-3-hydroxyacyl coa dehydrogenase. Chain: a, b. Synonym: schad. Engine --end-- VNG5201h one-of-top-five-correct: 0.385965056809452 CThresh: 2.303115 100 best_is: cluster05 VNG5201h cluster00 -> 1vin01 7.1396865 139 / 66 conP: 0.271 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG5201h cluster01 -> 1guxB0 6.6842421 141 / 66 conP: 0.242 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG5201h cluster02 -> 2hmqA0 7.5684895 113 / 66 conP: 0.356 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG5201h cluster03 -> 1rthA3 6.7108836 94 / 66 conP: 0.346 CATH-ID: 3.90.840.10 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere VNG5201h cluster04 -> 1bu2A2 6.4964821 102 / 66 conP: 0.313 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG5201h cluster05 -> 1fnnA1 7.5684895 101 / 66 conP: 0.386 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer --end-- VNG52040 one-of-top-five-correct: 0.288718021846566 CThresh: 4.994017 75 best_is: cluster02 VNG52040 cluster00 -> 1preA2 4.5989872 173 / 65 conP: 0.061 CATH-ID: 3.30.412.10 Proaerolysin. Chain: a, b. Engineered: yes VNG52040 cluster01 -> 1bpb02 5.7647798 114 / 65 conP: 0.147 CATH-ID: 3.30.460.10 DNA polymerase beta (beta polymerase) (apo, 31kd domain) VNG52040 cluster02 -> 1chmA1 7.6144395 155 / 65 conP: 0.159 CATH-ID: 3.40.350.10 Creatine amidinohydrolase VNG52040 cluster03 -> 1fvpA0 6.9682711 231 / 65 conP: 0.065 CATH-ID: 3.20.20.30 Flavoprotein 390. Chain: a, b. Synonym: fp390. Heterogen: myristilated VNG52040 cluster04 -> 1cauA0 5.1396119 181 / 65 conP: 0.066 CATH-ID: 2.60.120.10 Canavalin (jack bean 7s vicilin) --end-- VNG52041 one-of-top-five-correct: 0.266435233339375 CThresh: 4.911379 75 best_is: cluster17 VNG52041 cluster00 -> 1gkxA 5.5624445 308 / 78 conP: 0.038 NO-CATH VNG52041 cluster01 -> 1vcaA1 5.4727334 89 / 78 conP: 0.214 CATH-ID: 2.60.40.10 Human vascular cell adhesion molecule-1. Chain: a, b. Synonym: vcam-d1 VNG52041 cluster02 -> 1sriA0 6.1685208 118 / 78 conP: 0.204 CATH-ID: 2.40.128.30 Streptavidin complexed with 3',5'-dimethyl-haba VNG52041 cluster03 -> 1hz6A0 5.0742959 67 / 78 conP: 0.228 CATH-ID: 3.10.20.210 Protein l. Chain: a, b, c. Fragment: b1 domain. Synonym: ig kappa ligh VNG52041 cluster04 -> 1igd00 5.3550478 61 / 78 conP: 0.252 CATH-ID: 3.10.20.10 Protein g VNG52041 cluster17 -> 1bj700 6.9766226 150 / 78 conP: 0.195 CATH-ID: 2.40.128.20 D 2. Chain: null. Synonym: dander major allergen bda20, dermal allerge --end-- VNG52061 one-of-top-five-correct: 0.256676482833661 CThresh: 8.055453 25 best_is: cluster19 VNG52061 cluster00 -> 1fc2C0 5.7666012 43 / 116 conP: 0.244 CATH-ID: 4.10.310.10 Immunoglobulin fc and fragment b of protein a complex VNG52061 cluster01 -> 1c05A1 6.8207014 71 / 116 conP: 0.270 CATH-ID: 1.10.1050.10 Ribosomal protein s4 delta 41. Chain: a. Fragment: s4 delta 41 (s4 res VNG52061 cluster02 -> 1idy00 6.5944764 54 / 116 conP: 0.277 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG52061 cluster03 -> 1ytfD1 5.5383316 53 / 116 conP: 0.221 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG52061 cluster04 -> 1colA0 4.5630840 197 / 116 conP: 0.083 CATH-ID: 1.10.490.30 Colicin A (c-terminal domain) (pore-forming domain) VNG52061 cluster19 -> 1d2nA2 7.3988883 67 / 116 conP: 0.309 CATH-ID: 1.10.8.60 N-ethylmaleimide-sensitive fusion protein. Chain: a. Fragment: d2. Eng --end-- VNG5209h one-of-top-five-correct: 0.260438602124544 CThresh: 9.356015 25 best_is: cluster14 VNG5209h cluster00 -> 1ytfB0 6.5591408 46 / 138 conP: 0.265 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5209h cluster01 -> 1ytfB0 6.7979811 46 / 138 conP: 0.278 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5209h cluster02 -> 1hwxA1 6.0551062 51 / 138 conP: 0.233 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG5209h cluster03 -> 1gln04 5.7383489 48 / 138 conP: 0.220 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG5209h cluster04 -> 1ytfB0 6.5591408 46 / 138 conP: 0.265 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5209h cluster14 -> 1cf7B0 7.5414819 82 / 138 conP: 0.285 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En --end-- VNG52102 one-of-top-five-correct: 0.606839541318918 CThresh: 4.567711 75 best_is: cluster12 VNG52102 cluster00 -> 2bct00 9.9138481 502 / 92 conP: 0.054 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG52102 cluster01 -> 1qdbA 8.1714362 473 / 92 conP: 0.041 NO-CATH VNG52102 cluster02 -> 2bct00 8.1714362 502 / 92 conP: 0.033 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG52102 cluster03 -> 1e8xA3 6.3700288 185 / 92 conP: 0.185 CATH-ID: 1.25.40.110 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG52102 cluster04 -> 1qgkA 5.8422165 876 / 92 conP: 0.001 NO-CATH VNG52102 cluster12 -> 1jwfA 10.462770 139 / 92 conP: 0.512 NO-CATH --end-- VNG5214h one-of-top-five-correct: 0.161365537252971 CThresh: 1.629312 100 best_is: cluster01 VNG5214h cluster00 -> 1b3qA2 4.7280758 174 / 35 conP: 0.023 CATH-ID: 3.30.565.20 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG5214h cluster01 -> 1a0p01 4.7280758 91 / 35 conP: 0.110 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG5214h cluster02 -> 1i6kA 4.7280758 316 / 35 conP: 0.001 NO-CATH VNG5214h cluster03 -> 1b3qA2 4.7280758 174 / 35 conP: 0.023 CATH-ID: 3.30.565.20 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG5214h cluster04 -> 1az902 4.7280758 266 / 35 conP: 0.004 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet --end-- VNG52152 one-of-top-five-correct: 0.488214954793617 CThresh: 2.275045 100 best_is: cluster09 VNG52152 cluster00 -> 1pgjA2 7.1844317 258 / 64 conP: 0.088 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase. Chain: a, b. Synonym: 6pgdh, 6-pgdh. VNG52152 cluster01 -> 1gxpA 8.1711498 103 / 64 conP: 0.413 NO-CATH VNG52152 cluster02 -> 1flp00 6.3629255 142 / 64 conP: 0.214 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG52152 cluster03 -> 1pgjA2 6.3378503 258 / 64 conP: 0.071 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase. Chain: a, b. Synonym: 6pgdh, 6-pgdh. VNG52152 cluster04 -> 1ddbA0 7.4449098 195 / 64 conP: 0.172 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG52152 cluster09 -> 1ihp02 8.7432908 137 / 64 conP: 0.364 CATH-ID: 1.10.910.10 Phytase. Chain: null. Synonym: myo-inositol-hexakisphosphate-3-phospho --end-- VNG5216h one-of-top-five-correct: 0.215327677833452 CThresh: 9.913776 25 best_is: cluster12 VNG5216h cluster00 -> 1anv01 5.8491474 115 / 125 conP: 0.136 CATH-ID: 1.10.269.10 Adenovirus single-stranded DNA-binding protein. Chain: null. Fragment: VNG5216h cluster01 -> 1hwxA1 6.7499816 51 / 125 conP: 0.226 CATH-ID: 1.20.15.110 Glutamate dehydrogenase. Chain: a, b, c, d, e, f. Synonym: gdh. Ec: 1. VNG5216h cluster02 -> 1ytfD1 5.7291335 53 / 125 conP: 0.177 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5216h cluster03 -> 1ytfB0 6.5591408 46 / 125 conP: 0.221 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG5216h cluster04 -> 256bA0 5.1242525 106 / 125 conP: 0.118 CATH-ID: 1.20.120.10 Cytochrome b562 (oxidized) VNG5216h cluster12 -> 1e7aA3 7.4076583 92 / 125 conP: 0.219 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG5217h one-of-top-five-correct: 0.202734068961015 CThresh: 7.313670 25 best_is: cluster02 VNG5217h cluster00 -> 1g84A0 5.0834655 105 / 82 conP: 0.116 CATH-ID: 2.60.40.10 Immunoglobulin e. Chain: a. Fragment: c epsilon2. Engineered: yes. Mut VNG5217h cluster01 -> 1hpwA0 6.7358675 129 / 82 conP: 0.147 CATH-ID: 3.30.700.10 Fimbrial protein. Chain: a. Fragment: pilin (residues 29-150). Synonym VNG5217h cluster02 -> 1pkp01 6.9990411 70 / 82 conP: 0.235 CATH-ID: 3.30.160.30 Ribosomal protein s5 (prokaryotic) VNG5217h cluster03 -> 3ladA3 5.5948019 122 / 82 conP: 0.116 CATH-ID: 3.30.390.30 Dihydrolipoamide dehydrogenase VNG5217h cluster04 -> 1e42A2 6.1660822 116 / 82 conP: 0.141 CATH-ID: 3.30.310.10 Beta2-adaptin. Synonym: plasma membrane adaptor ha2/ap2 adaptin beta s --end-- VNG5222c one-of-top-five-correct: 0.490037768891201 CThresh: 5.218287 75 best_is: cluster13 VNG5222c cluster00 -> 1ars02 7.9669770 271 / 133 conP: 0.288 CATH-ID: 3.40.640.10 Aspartate aminotransferase complexed with pyridoxal-5'-phosphate VNG5222c cluster01 -> 1idy00 6.6747465 54 / 133 conP: 0.466 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG5222c cluster02 -> 1ku3A 7.3107705 61 / 133 conP: 0.502 NO-CATH VNG5222c cluster03 -> 1hstA0 7.1049187 74 / 133 conP: 0.470 CATH-ID: 1.10.10.10 Histone h5 (globular domain) VNG5222c cluster04 -> 1ku3A 7.7397297 61 / 133 conP: 0.533 NO-CATH VNG5222c cluster13 -> 1bia01 8.5268940 64 / 133 conP: 0.585 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin --end-- VNG52230 one-of-top-five-correct: 0.374874062417452 CThresh: 5.256138 75 best_is: cluster14 VNG52230 cluster00 -> 1i36A 5.4478809 258 / 78 conP: 0.052 NO-CATH VNG52230 cluster01 -> 1qjtA0 5.3604191 99 / 78 conP: 0.182 CATH-ID: 1.10.238.10 Epidermal growth factor receptor substrate substrate 15, eps15. Chain: VNG52230 cluster02 -> 1ytfD1 5.5001509 53 / 78 conP: 0.259 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG52230 cluster03 -> 1juoA 5.8555831 172 / 78 conP: 0.118 NO-CATH VNG52230 cluster04 -> 1drgA 5.4727334 313 / 78 conP: 0.033 NO-CATH VNG52230 cluster14 -> 1fjgT0 8.5056473 99 / 78 conP: 0.355 CATH-TRUNC --end-- VNG5224h one-of-top-five-correct: 0.259926279491213 CThresh: 2.437417 100 best_is: cluster02 VNG5224h cluster00 -> 1fioA0 4.8899389 190 / 48 conP: 0.044 CATH-ID: 1.20.1050.30 Sso1 protein. Chain: a. Fragment: cytoplasmic domain. Engineered: yes. VNG5224h cluster01 -> 1fioA0 5.7383489 190 / 48 conP: 0.055 CATH-ID: 1.20.1050.30 Sso1 protein. Chain: a. Fragment: cytoplasmic domain. Engineered: yes. VNG5224h cluster02 -> 1qqeA0 6.4458751 281 / 48 conP: 0.019 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG5224h cluster03 -> 1dioA 5.5025069 551 / 48 conP: 0.000 NO-CATH VNG5224h cluster04 -> 1sbp02 5.7383489 158 / 48 conP: 0.085 CATH-ID: 3.40.190.10 Sulfate-binding protein --end-- VNG52290 one-of-top-five-correct: 0.525956690313395 CThresh: 3.395892 75 best_is: cluster03 VNG52290 cluster00 -> 1tcrA2 8.5724182 91 / 69 conP: 0.437 CATH-ID: 2.60.40.460 Alpha, beta t-cell receptor (vb8.2db2jb2.4cb2\.Va3ja58ca). Chain: a, b VNG52290 cluster01 -> 1dq3A4 7.6473864 114 / 69 conP: 0.320 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG52290 cluster02 -> 1hocA2 8.7051248 91 / 69 conP: 0.446 CATH-ID: 2.60.40.10 Murine class i major histocompatibility complex consisting of h-2d==b= VNG52290 cluster03 -> 1tplA1 9.5513156 181 / 69 conP: 0.292 CATH-ID: 3.30.70.160 Tyrosine phenol-lyase VNG52290 cluster04 -> 1chkA2 5.3203619 95 / 69 conP: 0.226 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes --end-- VNG52330 one-of-top-five-correct: 0.284383082257119 CThresh: 5.097920 75 best_is: cluster08 VNG52330 cluster00 -> 1e7aA2 5.3982905 90 / 73 conP: 0.188 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG52330 cluster01 -> 1adjA2 6.8541389 96 / 73 conP: 0.249 CATH-ID: 3.40.50.800 Histidyl-tRNA synthetase. Chain: a, b, c, d. Biological_unit: active a VNG52330 cluster02 -> 1fc2C0 5.5229456 43 / 73 conP: 0.273 CATH-ID: 4.10.310.10 Immunoglobulin fc and fragment b of protein a complex VNG52330 cluster03 -> 1chkA2 5.6062688 95 / 73 conP: 0.189 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG52330 cluster04 -> 1htjF 5.3982905 178 / 73 conP: 0.090 NO-CATH VNG52330 cluster08 -> 1b87A0 7.4213492 181 / 73 conP: 0.147 CATH-ID: 3.40.630.30 Aminoglycoside n6'-acetyltransferase type 1. Chain: a. Synonym: aac. M --end-- VNG52331 one-of-top-five-correct: 0.393005273731824 CThresh: 5.473791 75 best_is: cluster04 VNG52331 cluster00 -> 1c9bA2 7.5103615 106 / 77 conP: 0.266 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG52331 cluster01 -> 1tc3C0 6.5942679 51 / 77 conP: 0.315 CATH-ID: 1.10.10.60 DNA. Chain: a, b. Engineered: yes. Tc3 transposase. Chain: c. Fragment VNG52331 cluster02 -> 1bkdS1 7.5249773 189 / 77 conP: 0.146 CATH-ID: 1.20.870.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y VNG52331 cluster03 -> 1gdtA3 6.2539125 43 / 77 conP: 0.309 CATH-ID: 1.10.10.60 Gamma-delta resolvase. Chain: a, b. Synonym: gd resolvase. Engineered: VNG52331 cluster04 -> 1fadA0 8.8370033 95 / 77 conP: 0.370 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi --end-- VNG52340 one-of-top-five-correct: 0.339384508196404 CThresh: 3.048094 75 best_is: cluster01 VNG52340 cluster00 -> 1aca00 6.4964821 86 / 66 conP: 0.314 CATH-ID: 1.20.80.10 Acyl-coenzyme a binding protein (acbp) complex with palmitoyl-coenzyme VNG52340 cluster01 -> 1d2mA3 7.3540880 177 / 66 conP: 0.182 CATH-ID: 3.40.50.300 Excinuclease abc subunit b. Chain: a. Synonym: uvrb. Engineered: yes VNG52340 cluster02 -> 1h72C 7.3540880 296 / 66 conP: 0.059 NO-CATH VNG52340 cluster03 -> 1d2mA3 6.0676792 177 / 66 conP: 0.133 CATH-ID: 3.40.50.300 Excinuclease abc subunit b. Chain: a. Synonym: uvrb. Engineered: yes VNG52340 cluster04 -> 1i9cA 5.6388762 137 / 66 conP: 0.172 NO-CATH --end-- VNG52341 one-of-top-five-correct: 0.259159959620007 CThresh: 6.328661 75 best_is: cluster00 VNG52341 cluster00 -> 1qfmA1 7.1294701 349 / 95 conP: 0.057 CATH-ID: 3.40.50.950 Prolyl oligopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-p VNG52341 cluster01 -> 2ilk01 6.0271235 106 / 95 conP: 0.209 CATH-ID: 1.20.120.200 Interleukin-10. Chain: null. Engineered: yes VNG52341 cluster02 -> 1tgl_ 6.5031844 265 / 95 conP: 0.086 NO-CATH VNG52341 cluster03 -> 1gtmA2 5.7627820 238 / 95 conP: 0.085 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a, b, c. Biological_unit: homohexamer VNG52341 cluster04 -> 1j4nA 6.1467878 249 / 95 conP: 0.087 NO-CATH --end-- VNG5236c one-of-top-five-correct: 0.675924674215549 CThresh: 3.001953 76 best_is: cluster10 VNG5236c cluster00 -> 1dusA0 9.8605357 192 / 80 conP: 0.383 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5236c cluster01 -> 1dusA0 10.187419 192 / 80 conP: 0.406 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5236c cluster02 -> 1dusA0 10.376089 192 / 80 conP: 0.419 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5236c cluster03 -> 1dusA0 10.584928 192 / 80 conP: 0.434 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG5236c cluster04 -> 1fbnA0 9.1936448 225 / 80 conP: 0.278 CATH-ID: 3.40.50.150 Mj fibrillarin homologue. Chain: a. Engineered: yes VNG5236c cluster10 -> 2ifeA0 10.850095 91 / 80 conP: 0.667 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin --end-- VNG5243h one-of-top-five-correct: 0.362264518531688 CThresh: 2.674533 100 best_is: cluster13 VNG5243h cluster00 -> 1e8gA3 7.2775994 231 / 54 conP: 0.067 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, VNG5243h cluster01 -> 1khmA0 7.0498917 89 / 54 conP: 0.297 CATH-ID: 3.30.70.210 Hnrnp k. Chain: a. Fragment: c-terminal kh domain, residues 379-463 of VNG5243h cluster02 -> 1cvjA2 6.1390610 92 / 54 conP: 0.238 CATH-ID: 3.30.70.330 Polydenylate binding protein 1. Chain: a, b, c, d, e, f, g, h. Fragmen VNG5243h cluster03 -> 1hnf02 6.3768078 79 / 54 conP: 0.284 CATH-ID: 2.60.40.10 Cd2 (human) VNG5243h cluster04 -> 1booA0 6.8221840 282 / 54 conP: 0.031 CATH-ID: 3.30.70.730 N-4 cytosine-specific methyltransferase pvu ii. Chain: a. Fragment: st VNG5243h cluster13 -> 1b6400 7.7330147 91 / 54 conP: 0.334 CATH-ID: 3.30.70.60 Elongation factor 1-beta. Chain: null. Fragment: guanine exchange fact --end-- VNG5244h one-of-top-five-correct: 0.317157802129087 CThresh: 3.615730 75 best_is: cluster03 VNG5244h cluster00 -> 1eh200 7.5218676 95 / 55 conP: 0.271 CATH-ID: 1.10.238.10 Eps15. Chain: null. Fragment: eps15 homology (eh) domain 2, residues 1 VNG5244h cluster01 -> 1a1w00 5.4127582 83 / 55 conP: 0.191 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG5244h cluster02 -> 1ddf00 6.0921444 127 / 55 conP: 0.141 CATH-ID: 1.10.533.10 Fas. Chain: null. Engineered: yes VNG5244h cluster03 -> 1fadA0 7.5859736 95 / 55 conP: 0.275 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG5244h cluster04 -> 1ivyA0 6.5450685 452 / 55 conP: 0.003 CATH-ID: 3.40.50.950 Human protective protein. Chain: a, b. Synonym: protective protein/cat --end-- VNG5247h one-of-top-five-correct: 0.531927724953401 CThresh: 6.582292 75 best_is: cluster09 VNG5247h cluster00 -> 1dceA1 7.1994270 317 / 92 conP: 0.063 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG5247h cluster01 -> 1jwfA 9.4217893 139 / 92 conP: 0.330 NO-CATH VNG5247h cluster02 -> 1a9xA4 7.5872015 150 / 92 conP: 0.211 CATH-ID: 1.10.1030.10 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG5247h cluster03 -> 1guxB0 6.8116526 141 / 92 conP: 0.186 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG5247h cluster04 -> 1bu2A2 6.8507291 102 / 92 conP: 0.238 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG5247h cluster09 -> 1jkw02 10.538267 101 / 92 conP: 0.476 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y --end-- VNG5248h one-of-top-five-correct: 0.490046667796044 CThresh: 3.752188 75 best_is: cluster11 VNG5248h cluster00 -> 1cf7B0 8.0655558 82 / 76 conP: 0.434 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG5248h cluster01 -> 1a4802 7.1714042 139 / 76 conP: 0.260 CATH-ID: 3.30.470.20 Phosphoribosylaminoimidazole-succinocarboxamide synthase. Chain: null. VNG5248h cluster02 -> 1lfb00 7.2443702 77 / 76 conP: 0.388 CATH-ID: 1.10.10.60 Transcription factor lfb1 (homeodomain) VNG5248h cluster03 -> 1bq7A0 6.7423738 186 / 76 conP: 0.167 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG5248h cluster04 -> 1derA1 7.5642157 250 / 76 conP: 0.124 CATH-ID: 1.10.560.10 Groel. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n. Engineered: ye VNG5248h cluster11 -> 2hmqA0 9.1600130 113 / 76 conP: 0.442 CATH-ID: 1.20.120.50 Hemerythrin (met) --end-- VNG5249h one-of-top-five-correct: 0.340513785171734 CThresh: 2.975462 100 best_is: cluster01 VNG5249h cluster00 -> 1a4iA1 5.1286056 127 / 51 conP: 0.110 CATH-ID: 3.40.50.720 Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyc VNG5249h cluster01 -> 1bu2A2 7.6764822 102 / 51 conP: 0.266 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG5249h cluster02 -> 1e7aA4 5.5918559 86 / 51 conP: 0.198 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG5249h cluster03 -> 1ej5A0 6.2867313 107 / 51 conP: 0.185 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG5249h cluster04 -> 1bg8A0 6.9816067 76 / 51 conP: 0.297 CATH-ID: 1.10.890.10 Hdea. Chain: a, b, c. Synonym: 10k-s protein, hypothetical protein a --end-- VNG5250h one-of-top-five-correct: 0.438418606374362 CThresh: 4.672441 75 best_is: cluster06 VNG5250h cluster00 -> 1jxbA 6.3465981 152 / 88 conP: 0.207 NO-CATH VNG5250h cluster01 -> 1iku01 6.6688820 94 / 88 conP: 0.313 CATH-ID: 1.10.238.10 Recoverin. Chain: null. Engineered: yes VNG5250h cluster02 -> 1euvB0 5.6208474 79 / 88 conP: 0.275 CATH-ID: 3.10.20.40 Ulp1 protease. Chain: a. Fragment: c-terminal protease domain. Enginee VNG5250h cluster03 -> 1qhaA2 5.7913233 261 / 88 conP: 0.086 CATH-ID: 3.40.367.20 Hexokinase. Chain: a, b. Engineered: yes. Other_details: complexed wit VNG5250h cluster04 -> 1ash00 5.9015363 147 / 88 conP: 0.193 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG5250h cluster06 -> 1am300 8.7353459 70 / 88 conP: 0.500 CATH-ID: 1.10.1200.30 HIV capsid. Chain: null. Fragment: c-terminal domain, residues 151 - 2 --end-- VNG52520 one-of-top-five-correct: 0.327163371709422 CThresh: 6.807042 75 best_is: cluster00 VNG52520 cluster00 -> 1chkA1 8.2251196 143 / 96 conP: 0.257 CATH-ID: 1.20.141.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG52520 cluster01 -> 1joeA 6.6939867 148 / 96 conP: 0.177 NO-CATH VNG52520 cluster02 -> 1ivyA0 6.1198119 452 / 96 conP: 0.019 CATH-ID: 3.40.50.950 Human protective protein. Chain: a, b. Synonym: protective protein/cat VNG52520 cluster03 -> 1dik05 5.8992248 89 / 96 conP: 0.208 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG52520 cluster04 -> 1jud02 6.4710262 75 / 96 conP: 0.255 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG52550 one-of-top-five-correct: 0.600785842549328 CThresh: 4.725465 75 best_is: cluster15 VNG52550 cluster00 -> 1fftC0 5.8257216 185 / 105 conP: 0.196 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG52550 cluster01 -> 1joyA0 6.6696961 67 / 105 conP: 0.406 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG52550 cluster02 -> 1a5mA0 6.9116830 100 / 105 conP: 0.370 CATH-ID: 3.30.280.10 Urease. Chain: a, b, c. Engineered: yes. Mutation: chain a, k217a. Bio VNG52550 cluster03 -> 1aci00 5.5407105 76 / 105 conP: 0.317 CATH-ID: 1.10.10.250 L11 ribosomal protein. Chain: null. Fragment: c-terminal domain, 76 re VNG52550 cluster04 -> 1cxzB0 7.3970363 86 / 105 conP: 0.426 CATH-ID: 1.20.15.130 His-tagged transforming protein rhoa(0-181). Chain: a. Fragment: resid VNG52550 cluster15 -> 1ez3A0 10.169021 124 / 105 conP: 0.562 CATH-ID: 1.20.1040.20 Syntaxin-1a. Chain: a, b, c. Fragment: n-terminal domain. Synonym: syn --end-- VNG6003h one-of-top-five-correct: 0.125262543011753 CThresh: 9.088197 25 best_is: cluster07 VNG6003h cluster00 -> 1ibrB0 4.2369133 458 / 111 conP: 0.011 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG6003h cluster01 -> 1ex1A1 4.1305898 373 / 111 conP: 0.019 CATH-ID: 3.20.20.300 Beta-d-glucan exohydrolase isoenzyme exo1. Chain: a. Synonym: exo1, ex VNG6003h cluster02 -> 1sbp01 4.7911205 151 / 111 conP: 0.085 CATH-ID: 3.40.190.10 Sulfate-binding protein VNG6003h cluster03 -> 1mroB2 4.2898072 295 / 111 conP: 0.031 CATH-ID: 1.20.840.10 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG6003h cluster04 -> 2ae2A0 4.4729072 259 / 111 conP: 0.041 CATH-ID: 3.40.50.720 Tropinone reductase-ii. Chain: a, b. Engineered: yes VNG6003h cluster07 -> 1fdr02 5.5715068 152 / 111 conP: 0.104 CATH-ID: 3.40.50.80 Flavodoxin reductase. Chain: null. Synonym: ferredoxin reductase. Engi --end-- VNG6005h one-of-top-five-correct: 0.385207607633684 CThresh: 8.848643 25 best_is: cluster13 VNG6005h cluster00 -> 1chuA3 6.9180314 102 / 131 conP: 0.238 CATH-ID: 1.20.1040.60 L-aspartate oxidase. Chain: a. Engineered: yes. Biological_unit: homod VNG6005h cluster01 -> 1gxpA 7.0647033 103 / 131 conP: 0.245 NO-CATH VNG6005h cluster02 -> 1fts01 6.5786542 84 / 131 conP: 0.238 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG6005h cluster03 -> 1fnnA1 5.6133258 101 / 131 conP: 0.178 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG6005h cluster04 -> 1k5hA 6.2133370 398 / 131 conP: 0.050 NO-CATH VNG6005h cluster13 -> 1occH0 9.0481263 75 / 131 conP: 0.400 CATH-ID: 1.10.10.140 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG6008h one-of-top-five-correct: 0.38357222758731 CThresh: 8.665679 25 best_is: cluster00 VNG6008h cluster00 -> 1kmeA 8.9690013 227 / 130 conP: 0.229 NO-CATH VNG6008h cluster01 -> 1mba00 6.2435340 146 / 130 conP: 0.173 CATH-ID: 1.10.490.10 Myoglobin (met) ( p H 7.0) VNG6008h cluster02 -> 1nf1A2 4.6308639 177 / 130 conP: 0.100 CATH-ID: 1.10.506.10 Neurofibromin. Chain: a. Fragment: gap related domain. Synonym: nf1-33 VNG6008h cluster03 -> 1b3qA1 5.3547235 62 / 130 conP: 0.203 CATH-ID: 1.20.15.220 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG6008h cluster04 -> 1lylA2 5.0265609 342 / 130 conP: 0.049 CATH-ID: 3.40.690.10 Lysyl-tRNA synthetase (lysu). Chain: a, b, c. Lysine. Chain: x, y, z --end-- VNG6009h one-of-top-five-correct: 0.608633669274185 CThresh: 1.710734 100 best_is: cluster01 VNG6009h cluster00 -> 1lmb30 7.2285129 87 / 64 conP: 0.420 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG6009h cluster01 -> 1dw9A 9.8252750 152 / 64 conP: 0.429 NO-CATH VNG6009h cluster02 -> 1lmb30 6.7957192 87 / 64 conP: 0.390 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG6009h cluster03 -> 1lmb30 6.7957192 87 / 64 conP: 0.390 CATH-ID: 1.10.260.10 Lambda repressor/operator complex VNG6009h cluster04 -> 1lmb30 7.2285129 87 / 64 conP: 0.420 CATH-ID: 1.10.260.10 Lambda repressor/operator complex --end-- VNG60162 one-of-top-five-correct: 0.367870412609418 CThresh: 2.671843 100 best_is: cluster09 VNG60162 cluster00 -> 1ash00 7.3570736 147 / 68 conP: 0.262 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG60162 cluster01 -> 2pgd02 5.3573167 255 / 68 conP: 0.061 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase (6-pgdh) VNG60162 cluster02 -> 1mhdA0 6.9364865 123 / 68 conP: 0.287 CATH-ID: 3.90.520.10 Smad3. Chain: a, b. Fragment: mh1 domain, residues 1 - 144. Synonym: s VNG60162 cluster03 -> 1tfe02 5.8969285 45 / 68 conP: 0.399 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG60162 cluster04 -> 1dceA1 6.6292930 317 / 68 conP: 0.048 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG60162 cluster09 -> 1flp00 7.4792178 142 / 68 conP: 0.279 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) --end-- VNG60260 one-of-top-five-correct: 0.324265577407886 CThresh: 4.790137 75 best_is: cluster14 VNG60260 cluster00 -> 1ayx00 5.7879900 492 / 84 conP: 0.012 CATH-ID: 1.50.10.30 Glucoamylase. Chain: null. Engineered: yes VNG60260 cluster01 -> 1npc02 6.3809882 161 / 84 conP: 0.180 CATH-ID: 1.10.390.10 Neutral protease VNG60260 cluster02 -> 1mroB1 5.8723499 147 / 84 conP: 0.176 CATH-ID: 3.30.70.470 Methyl-coenzyme m reductase. Chain: a, b, c, d, e, f. Biological_unit: VNG60260 cluster03 -> 1cbf02 7.1716524 121 / 84 conP: 0.278 CATH-ID: 3.30.950.10 Cobalt-precorrin-4 transmethylase. Chain: null. Synonym: precorrin-4 m VNG60260 cluster04 -> 1hp800 4.9294435 68 / 84 conP: 0.239 CATH-ID: 1.10.810.10 Hu-p8. Chain: null. Engineered: synthetic gene. Mutation: n-terminal i VNG60260 cluster14 -> 1czaN1 7.5475565 187 / 84 conP: 0.198 CATH-ID: 3.30.420.40 Hexokinase type i. Chain: n. Engineered: yes. Mutation: yes --end-- VNG60261 one-of-top-five-correct: 0.57800725970138 CThresh: 5.239984 75 best_is: cluster16 VNG60261 cluster00 -> 1qf6A4 9.6462899 296 / 89 conP: 0.164 CATH-ID: 3.40.690.10 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG60261 cluster01 -> 1fbaA0 8.8628824 360 / 89 conP: 0.086 CATH-ID: 3.20.20.70 Fructose-1,6-bisphosphate aldolase VNG60261 cluster02 -> 1pymA0 8.4641480 284 / 89 conP: 0.133 CATH-ID: 3.20.20.270 Phosphoenolpyruvate mutase. Chain: a, b. Synonym: phosphoenolpyruvate VNG60261 cluster03 -> 1iso00 8.2753268 414 / 89 conP: 0.050 CATH-ID: 3.40.718.10 Isocitrate dehydrogenase. Chain: null. Synonym: oxalosuccinate decarbo VNG60261 cluster04 -> 1i5nA0 5.8453474 124 / 89 conP: 0.202 CATH-ID: 1.20.120.160 Chemotaxis protein chea. Chain: a, b, c, d. Fragment: residues 1-138. VNG60261 cluster16 -> 1kkrA 10.508967 401 / 89 conP: 0.099 CATH-TRUNC --end-- VNG60350 one-of-top-five-correct: 0.44412899105231 CThresh: 5.322764 75 best_is: cluster02 VNG60350 cluster00 -> 1ns1A0 7.2700956 73 / 87 conP: 0.353 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re VNG60350 cluster01 -> 1efvA2 8.1517154 185 / 87 conP: 0.222 CATH-ID: 3.40.50.1120 Electron transfer flavoprotein. Chain: a, b. Synonym: etf, hetf, elect VNG60350 cluster02 -> 1cb8A1 9.1164501 312 / 87 conP: 0.120 CATH-ID: 1.50.40.10 Chondroitinase ac. Chain: a. Ec: 4.2.2.5 VNG60350 cluster03 -> 1fiy02 5.5879949 374 / 87 conP: 0.029 CATH-ID: 3.20.20.60 Phosphoenolpyruvate carboxylase. Chain: null. Synonym: pepc. Engineere VNG60350 cluster04 -> 1cc8A0 6.7378759 72 / 87 conP: 0.321 CATH-ID: 3.30.70.100 Metallochaperone atx1. Chain: a. Engineered: yes --end-- VNG60352 one-of-top-five-correct: 0.42332274689584 CThresh: 3.913793 75 best_is: cluster16 VNG60352 cluster00 -> 1tys00 6.9320001 264 / 71 conP: 0.075 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) VNG60352 cluster01 -> 1f3tD2 5.5724420 226 / 71 conP: 0.074 CATH-ID: 3.20.20.10 Ornithine decarboxylase. Chain: a, b, c, d. Synonym: odc. Engineered: VNG60352 cluster02 -> 1pueE0 5.2697097 88 / 71 conP: 0.222 CATH-ID: 1.10.10.10 DNA (16 base pairs). Chain: a, b, c, d. Engineered: yes. Transcription VNG60352 cluster03 -> 1cuk02 5.9900432 76 / 71 conP: 0.283 CATH-ID: 1.10.150.30 Ruva protein. Chain: null. Engineered: yes VNG60352 cluster04 -> 1i4fA 5.8833445 275 / 71 conP: 0.051 CATH-TRUNC VNG60352 cluster16 -> 1tys00 8.6098490 264 / 71 conP: 0.117 CATH-ID: 3.30.572.10 Thymidylate synthase mutant with cys 146 replaced by ser (c146s) --end-- VNG60356 one-of-top-five-correct: 0.698726243189692 CThresh: 1.453395 100 best_is: cluster02 VNG60356 cluster00 -> 1auwA2 9.3498790 228 / 73 conP: 0.304 CATH-ID: 1.20.200.10 Delta 2 crystallin. Chain: a, b, c, d. Engineered: yes. Mutation: h89n VNG60356 cluster01 -> 1auwA2 8.3099873 228 / 73 conP: 0.245 CATH-ID: 1.20.200.10 Delta 2 crystallin. Chain: a, b, c, d. Engineered: yes. Mutation: h89n VNG60356 cluster02 -> 1jgjA0 10.597749 217 / 73 conP: 0.411 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG60356 cluster03 -> 1dkxA2 8.1444941 80 / 73 conP: 0.561 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG60356 cluster04 -> 1qdbA 7.8940306 473 / 73 conP: 0.027 CATH-TRUNC --end-- VNG6036h one-of-top-five-correct: 0.270704966610262 CThresh: 3.067522 75 best_is: cluster03 VNG6036h cluster00 -> 191400 6.3914577 171 / 49 conP: 0.078 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG6036h cluster01 -> 191400 6.3914577 171 / 49 conP: 0.078 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG6036h cluster02 -> 1ewiA0 5.2194542 114 / 49 conP: 0.121 CATH-ID: 2.40.50.10 Replication protein a. Chain: a. Fragment: n-terminal fragment (residu VNG6036h cluster03 -> 191400 6.8602591 171 / 49 conP: 0.089 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG6036h cluster04 -> 191400 6.8602591 171 / 49 conP: 0.089 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment --end-- VNG60382 one-of-top-five-correct: 0.431426419903914 CThresh: 2.475787 100 best_is: cluster06 VNG60382 cluster00 -> 1geo01 6.3378503 166 / 68 conP: 0.185 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG60382 cluster01 -> 1cjl00.man 5.5668870 215 / 68 conP: 0.099 NO-CATH VNG60382 cluster02 -> 1geo01 7.0038279 166 / 68 conP: 0.216 CATH-ID: 3.30.413.10 Sulfite reductase hemoprotein. Chain: null. Synonym: sirhp. Engineered VNG60382 cluster03 -> 1dlwA0 6.6292930 116 / 68 conP: 0.292 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a. Engineered: yes VNG60382 cluster04 -> 1jdrA 7.4792178 294 / 68 conP: 0.078 NO-CATH VNG60382 cluster06 -> 1evyA 8.1166614 346 / 68 conP: 0.056 NO-CATH --end-- VNG60400 one-of-top-five-correct: 0.026048410710518 CThresh: 4.772313 75 best_is: --end-- VNG60430 one-of-top-five-correct: 0.0189813556978399 CThresh: 6.726467 75 best_is: --end-- VNG6045h one-of-top-five-correct: 0.536478834054284 CThresh: 4.634139 75 best_is: cluster03 VNG6045h cluster00 -> 1bco01 6.4575085 222 / 88 conP: 0.135 CATH-ID: 3.30.420.10 Bacteriophage mu transposase. Chain: null. Domain: core (residues 248 VNG6045h cluster01 -> 1ryp10 6.9361750 222 / 88 conP: 0.152 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG6045h cluster02 -> 1bk7A0 5.9535469 190 / 88 conP: 0.148 CATH-ID: 3.90.730.10 Ribonuclease mc1. Chain: a. Synonym: rnase mc1. Ec: 3.1.27.1 VNG6045h cluster03 -> 1d1dA2 9.7959113 80 / 88 conP: 0.559 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG6045h cluster04 -> 1d0nA3 5.9015363 121 / 88 conP: 0.229 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b --end-- VNG6046h one-of-top-five-correct: 0.339476696037116 CThresh: 3.003360 100 best_is: cluster02 VNG6046h cluster00 -> 1ocrE0 4.7668517 109 / 51 conP: 0.124 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG6046h cluster01 -> 1rypC0 5.3602307 244 / 51 conP: 0.026 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG6046h cluster02 -> 1bu2A2 7.6764822 102 / 51 conP: 0.265 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG6046h cluster03 -> 1e7aA1 7.2132319 103 / 51 conP: 0.237 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6046h cluster04 -> 1rypH0 5.5918559 205 / 51 conP: 0.046 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, --end-- VNG6047h one-of-top-five-correct: 0.573055056765778 CThresh: 3.652928 75 best_is: cluster13 VNG6047h cluster00 -> 1cf7B0 8.1516429 82 / 76 conP: 0.446 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG6047h cluster01 -> 1a4802 7.1714042 139 / 76 conP: 0.264 CATH-ID: 3.30.470.20 Phosphoribosylaminoimidazole-succinocarboxamide synthase. Chain: null. VNG6047h cluster02 -> 2ezh00 8.6913868 65 / 76 conP: 0.524 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: igamma subdomain, residues 174 - 2 VNG6047h cluster03 -> 1e7aA6 8.5085362 78 / 76 conP: 0.481 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6047h cluster04 -> 1c3qA0 8.1805971 272 / 76 conP: 0.124 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG6047h cluster13 -> 1cf7B0 10.029741 82 / 76 conP: 0.580 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En --end-- VNG6048h one-of-top-five-correct: 0.420161608413629 CThresh: 6.639200 75 best_is: cluster07 VNG6048h cluster00 -> 1bkdS2 6.8592564 242 / 92 conP: 0.096 CATH-ID: 1.10.840.10 H-ras. Chain: r. Fragment: residues 1-166. Synonym: p21. Engineered: y VNG6048h cluster01 -> 1flp00 6.5355132 142 / 92 conP: 0.172 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG6048h cluster02 -> 1jmsA 7.7842378 360 / 92 conP: 0.054 NO-CATH VNG6048h cluster03 -> 1jkw02 6.9491676 101 / 92 conP: 0.242 CATH-ID: 1.10.472.10 Cyclin h. Chain: null. Synonym: rcyclin h (recombinant). Engineered: y VNG6048h cluster04 -> 1clc02 6.1378788 439 / 92 conP: 0.019 CATH-ID: 1.50.10.30 Endoglucanase celd. Synonyms: 1,4-beta-d-glucan-glucanohydrolase, cell VNG6048h cluster07 -> 1ft1A0 9.3321865 315 / 92 conP: 0.111 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes --end-- VNG6051h one-of-top-five-correct: 0.316284288459254 CThresh: 3.342292 75 best_is: cluster12 VNG6051h cluster00 -> 1ej5A0 6.9979926 107 / 55 conP: 0.226 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG6051h cluster01 -> 1chkA2 7.4509167 95 / 55 conP: 0.280 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG6051h cluster02 -> 1fts01 6.7033501 84 / 55 conP: 0.265 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG6051h cluster03 -> 1blwC0 5.8656823 137 / 55 conP: 0.126 CATH-ID: 1.20.120.200 Erythropoietin receptor. Chain: a, b. Fragment: extracellular domains. VNG6051h cluster04 -> 1onrA0 6.7715306 316 / 55 conP: 0.019 CATH-ID: 3.20.20.70 Transaldolase b. Chain: a, b. Engineered: yes VNG6051h cluster12 -> 1c07A0 7.4509167 95 / 55 conP: 0.280 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm --end-- VNG6052h one-of-top-five-correct: 0.367445781251253 CThresh: 2.264284 100 best_is: cluster07 VNG6052h cluster00 -> 1ha101 6.9816067 85 / 51 conP: 0.305 CATH-ID: 3.30.70.330 Hnrnp a1. Chain: null. Fragment: hnrnp a1 (rbd1, rbd2). Synonym: heter VNG6052h cluster01 -> 1ha101 6.7499816 85 / 51 conP: 0.291 CATH-ID: 3.30.70.330 Hnrnp a1. Chain: null. Fragment: hnrnp a1 (rbd1, rbd2). Synonym: heter VNG6052h cluster02 -> 1e8gA3 6.7499816 231 / 51 conP: 0.052 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, VNG6052h cluster03 -> 1gh8A0 6.7499816 89 / 51 conP: 0.280 CATH-ID: 3.30.70.60 Translation elongation factor 1beta. Chain: a. Engineered: yes VNG6052h cluster04 -> 1gcuA2 6.7499816 148 / 51 conP: 0.148 CATH-ID: 3.30.360.10 Biliverdin reductase a. Chain: a. Engineered: yes VNG6052h cluster07 -> 1ha101 7.6764822 85 / 51 conP: 0.349 CATH-ID: 3.30.70.330 Hnrnp a1. Chain: null. Fragment: hnrnp a1 (rbd1, rbd2). Synonym: heter --end-- VNG6059c one-of-top-five-correct: 0.553364526038342 CThresh: 5.100697 75 best_is: cluster00 VNG6059c cluster00 -> 1dusA0 10.376089 192 / 80 conP: 0.310 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG6059c cluster01 -> 1dusA0 7.6938129 192 / 80 conP: 0.172 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG6059c cluster02 -> 1dusA0 8.6786869 192 / 80 conP: 0.216 CATH-ID: 3.40.50.150 Mj0882. Chain: a. Engineered: yes VNG6059c cluster03 -> 1yrgA0 8.8271612 343 / 80 conP: 0.071 CATH-ID: 3.80.10.10 Gtpase-activating protein rna1_schpo. Chain: a, b. Synonym: rna1p. Ran VNG6059c cluster04 -> 1xvaA2 9.2317480 188 / 80 conP: 0.251 CATH-ID: 3.40.50.150 Glycine n-methyltransferase. Chain: a, b. Synonym: gnmt, s-adenosyl-l- --end-- VNG60611 one-of-top-five-correct: 0.0205905721470071 CThresh: 6.225340 75 best_is: --end-- VNG60620 one-of-top-five-correct: 0.0258717921396217 CThresh: 4.814476 75 best_is: --end-- VNG60621 one-of-top-five-correct: 0.0229148299512159 CThresh: 5.565401 75 best_is: --end-- VNG60650 one-of-top-five-correct: 0.510834668698626 CThresh: 3.295077 75 best_is: cluster01 VNG60650 cluster00 -> 1tplA1 8.7051248 181 / 69 conP: 0.249 CATH-ID: 3.30.70.160 Tyrosine phenol-lyase VNG60650 cluster01 -> 1dq3A3 9.3397679 87 / 69 conP: 0.508 CATH-ID: 3.10.28.10 Endonuclease. Chain: a. Engineered: yes VNG60650 cluster02 -> 1fjcA0 7.5254094 96 / 69 conP: 0.358 CATH-ID: 3.30.70.330 Nucleolin rbd2. Chain: a. Synonym: protein c23. Engineered: yes VNG60650 cluster03 -> 1chkA2 6.8011957 95 / 69 conP: 0.314 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG60650 cluster04 -> 1joeA 7.4358388 148 / 69 conP: 0.243 CATH-TRUNC --end-- VNG6070h one-of-top-five-correct: 0.259300190068708 CThresh: 2.457079 100 best_is: cluster12 VNG6070h cluster00 -> 1ignA2 4.7949807 95 / 48 conP: 0.150 CATH-ID: 1.10.10.60 Rap1. Chain: a, b. Fragment: DNA binding domain 353 - 598. Synonym: gr VNG6070h cluster01 -> 1fioA0 5.0308228 190 / 48 conP: 0.045 CATH-ID: 1.20.1050.30 Sso1 protein. Chain: a. Fragment: cytoplasmic domain. Engineered: yes. VNG6070h cluster02 -> 1hiwA0 5.9741910 115 / 48 conP: 0.156 CATH-ID: 1.10.150.90 HIV-1 matrix protein. Chain: a, b, c, q, r, s. Fragment: core protein VNG6070h cluster03 -> 1fioA0 5.2666648 190 / 48 conP: 0.048 CATH-ID: 1.20.1050.30 Sso1 protein. Chain: a. Fragment: cytoplasmic domain. Engineered: yes. VNG6070h cluster04 -> 1iqrA 5.0308228 415 / 48 conP: 0.002 NO-CATH VNG6070h cluster12 -> 1ddbA0 6.4458751 195 / 48 conP: 0.062 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer --end-- VNG60710 one-of-top-five-correct: 0.346461131565903 CThresh: 5.101241 75 best_is: cluster12 VNG60710 cluster00 -> 1a5t03 6.0592648 116 / 78 conP: 0.195 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG60710 cluster01 -> 1qjtA0 5.7644699 99 / 78 conP: 0.205 CATH-ID: 1.10.238.10 Epidermal growth factor receptor substrate substrate 15, eps15. Chain: VNG60710 cluster02 -> 2tct01 6.5116168 65 / 78 conP: 0.303 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. VNG60710 cluster03 -> 1cei00 6.0354353 85 / 78 conP: 0.241 CATH-ID: 1.10.1200.20 Colicin e7 immunity protein. Chain: null. Synonym: imme7 VNG60710 cluster04 -> 1atg02 5.3825913 109 / 78 conP: 0.175 CATH-ID: 3.40.190.10 Periplasmic molybdate-binding protein. Chain: null. Synonym: moda VNG60710 cluster12 -> 1l8gA 8.0979451 297 / 78 conP: 0.079 NO-CATH --end-- VNG6072c one-of-top-five-correct: 0.511928011839778 CThresh: 5.263426 75 best_is: cluster15 VNG6072c cluster00 -> 1ku3A 7.5252501 61 / 133 conP: 0.515 NO-CATH VNG6072c cluster01 -> 1enh00 6.5955648 54 / 133 conP: 0.457 CATH-ID: 1.10.10.60 Engrailed homeodomain VNG6072c cluster02 -> 1bia01 7.2285129 64 / 133 conP: 0.490 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG6072c cluster03 -> 1bia01 8.0941003 64 / 133 conP: 0.552 CATH-ID: 1.10.10.10 Bira bifunctional protein (acts as biotin operon repressor and biotin VNG6072c cluster04 -> 1xgsA2 7.6833512 77 / 133 conP: 0.505 CATH-ID: 1.10.10.10 Methionine aminopeptidase. Chain: a, b. Biological_unit: active as a m --end-- VNG6077h one-of-top-five-correct: 0.218973505137879 CThresh: 7.253861 25 best_is: cluster08 VNG6077h cluster00 -> 1prn00 6.2438219 289 / 82 conP: 0.037 CATH-ID: 2.40.160.10 Porin VNG6077h cluster01 -> 1a0sP0 5.1295911 413 / 82 conP: 0.010 CATH-ID: 2.40.170.10 Sucrose-specific porin. Chain: p, q, r. Engineered: yes. Biological_un VNG6077h cluster02 -> 1qmgA2 4.7280220 293 / 82 conP: 0.024 CATH-ID: 1.10.572.10 Acetohydroxy-acid isomeroreductase. Chain: a, b, c, d. Synonym: keto-a VNG6077h cluster03 -> 1tsp00 6.0447465 544 / 82 conP: 0.004 CATH-ID: 2.160.20.20 Tailspike-protein. Chain: null. Domain: residues 109 - 666. Synonym: t VNG6077h cluster04 -> 1fruA1 4.3264529 177 / 82 conP: 0.055 CATH-ID: 3.30.500.10 Fc (igg) receptor (neonatal) (orthorhombic crystal form) (fcrn) (extra VNG6077h cluster08 -> 1fskA0 7.2391985 159 / 82 conP: 0.135 CATH-ID: 3.30.530.20 Major pollen allergen bet v 1-a. Chain: a, d, g, j. Synonym: bet v i-a --end-- VNG6078h one-of-top-five-correct: 0.22924021218341 CThresh: 9.859360 25 best_is: cluster05 VNG6078h cluster00 -> 1a3gA1 5.2620276 135 / 125 conP: 0.107 CATH-ID: 3.30.470.10 Branched-chain amino acid aminotransferase. Chain: a, b, c. Biological VNG6078h cluster01 -> 1e7aA4 7.1118929 86 / 125 conP: 0.212 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6078h cluster02 -> 1a5t03 5.6660923 116 / 125 conP: 0.130 CATH-ID: 1.20.272.10 Delta prime. Chain: null. Synonym: holb. Engineered: yes. Biological_u VNG6078h cluster03 -> 1nhp03 5.2326502 113 / 125 conP: 0.119 CATH-ID: 3.30.390.30 Nadh peroxidase (npx) mutant with cys 42 replaced by ala (c42a) VNG6078h cluster04 -> 2occA0 7.0569286 514 / 125 conP: 0.024 CATH-ID: 1.20.210.10 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG6078h cluster05 -> 1bucA3 7.6033508 141 / 125 conP: 0.186 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd --end-- VNG60792 one-of-top-five-correct: 0.0394935887325045 CThresh: 2.176171 100 best_is: --end-- VNG6080h one-of-top-five-correct: 0.161156459568026 CThresh: 1.638643 100 best_is: cluster00 VNG6080h cluster00 -> 1a0p01 4.7280758 91 / 35 conP: 0.110 CATH-ID: 1.10.150.130 Site-specific recombinase xerd. Chain: null. Engineered: yes VNG6080h cluster01 -> 1b3qA2 4.7280758 174 / 35 conP: 0.023 CATH-ID: 3.30.565.20 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG6080h cluster02 -> 1a81A2 4.7280758 45 / 35 conP: 0.236 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG6080h cluster03 -> 1aorA3 4.7280758 207 / 35 conP: 0.012 CATH-ID: 1.10.599.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri VNG6080h cluster04 -> 1knyA2 4.7280758 128 / 35 conP: 0.056 CATH-ID: 1.20.30.20 Kanamycin nucleotidyltransferase. Chain: a, b. Synonym: kntase. Engine --end-- VNG60840 one-of-top-five-correct: 0.0159504635247053 CThresh: 7.795233 25 best_is: --end-- VNG60842 one-of-top-five-correct: 0.0270868571350959 CThresh: 4.529900 75 best_is: --end-- VNG6085h one-of-top-five-correct: 0.361894740220508 CThresh: 9.054937 25 best_is: cluster17 VNG6085h cluster00 -> 1ytfB0 6.3203004 46 / 138 conP: 0.265 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG6085h cluster01 -> 1lfb00 7.5103615 77 / 138 conP: 0.302 CATH-ID: 1.10.10.60 Transcription factor lfb1 (homeodomain) VNG6085h cluster02 -> 1gln04 5.5025069 48 / 138 conP: 0.220 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG6085h cluster03 -> 1ytfB0 6.3203004 46 / 138 conP: 0.265 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG6085h cluster04 -> 1qo0D2 6.3203004 46 / 138 conP: 0.265 CATH-ID: 1.10.15.10 Amic. Chain: a, b. Fragment: amide receptor. Engineered: yes. Other_de VNG6085h cluster17 -> 1e7aA6 8.7094984 78 / 138 conP: 0.379 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG60881 one-of-top-five-correct: 0.277163689812486 CThresh: 7.917408 25 best_is: cluster08 VNG60881 cluster00 -> 1eijA0 6.1577382 72 / 116 conP: 0.238 CATH-ID: 1.10.1190.10 Hypothetical protein mth1615. Chain: a. Other_details: homologous to h VNG60881 cluster01 -> 1mba00 6.4862231 146 / 116 conP: 0.180 CATH-ID: 1.10.490.10 Myoglobin (met) ( p H 7.0) VNG60881 cluster02 -> 1ash00 6.2708611 147 / 116 conP: 0.170 CATH-ID: 1.10.490.10 Hemoglobin (domain one) VNG60881 cluster03 -> 1k5hA 7.2728404 398 / 116 conP: 0.057 NO-CATH VNG60881 cluster04 -> 1pbv02 6.3272667 113 / 116 conP: 0.204 CATH-ID: 1.10.1000.11 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: VNG60881 cluster08 -> 1bw6A0 7.6230167 56 / 116 conP: 0.344 CATH-ID: 1.10.10.60 Centromere protein b. Chain: a. Fragment: DNA-binding domain. Engineer --end-- VNG60900 one-of-top-five-correct: 0.258439941104286 CThresh: 4.964534 75 best_is: cluster16 VNG60900 cluster00 -> 1l3jA 4.4042732 372 / 65 conP: 0.007 NO-CATH VNG60900 cluster01 -> 1chmA1 6.8456570 155 / 65 conP: 0.133 CATH-ID: 3.40.350.10 Creatine amidinohydrolase VNG60900 cluster02 -> 1jvr00 5.6759344 137 / 65 conP: 0.117 CATH-ID: 1.10.185.10 Human t-cell leukemia virus type ii matrix protein. Chain: null. Synon VNG60900 cluster03 -> 1cl2A3 5.2451555 139 / 65 conP: 0.103 CATH-ID: 3.30.70.160 Cystathionine beta-lyase. Chain: a, b. Synonym: beta cystathionase. En VNG60900 cluster04 -> 1dj0A2 6.5983369 107 / 65 conP: 0.193 CATH-ID: 3.30.70.580 Pseudouridine synthase i. Chain: a, b. Engineered: yes VNG60900 cluster16 -> 1az902 7.1836606 266 / 65 conP: 0.048 CATH-ID: 3.90.230.10 Aminopeptidase p. Chain: null. Synonym: ampp. Biological_unit: homotet --end-- VNG60901 one-of-top-five-correct: 0.240030781582387 CThresh: 4.863878 75 best_is: cluster06 VNG60901 cluster00 -> 1avgI0 5.4478809 142 / 78 conP: 0.145 CATH-ID: 2.40.128.20 Thrombin. Chain: l, h. Other_details: thE C-terminal segment of the l- VNG60901 cluster01 -> 1c8pA0 6.0594342 102 / 78 conP: 0.224 CATH-ID: 2.60.40.30 Cytokine receptor common beta chain. Chain: a. Fragment: domain 4. Eng VNG60901 cluster02 -> 1hz6A0 5.5664414 67 / 78 conP: 0.256 CATH-ID: 3.10.20.210 Protein l. Chain: a, b, c. Fragment: b1 domain. Synonym: ig kappa ligh VNG60901 cluster03 -> 1kacB0 5.2440298 124 / 78 conP: 0.158 CATH-ID: 2.60.40.10 Fiber knob protein. Chain: a. Fragment: knob. Engineered: yes. Coxsack VNG60901 cluster04 -> 1igd00 5.5644098 61 / 78 conP: 0.266 CATH-ID: 3.10.20.10 Protein g VNG60901 cluster06 -> 1qu0A0 6.5725717 181 / 78 conP: 0.142 CATH-ID: 2.60.120.60 Laminin alpha2 chain. Chain: a, b, c, d. Fragment: lg5 module. Enginee --end-- VNG6093h one-of-top-five-correct: 0.361621253710393 CThresh: 2.458316 100 best_is: cluster04 VNG6093h cluster00 -> 1aisB1 6.4964821 99 / 66 conP: 0.313 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG6093h cluster01 -> 1aisB1 6.7108836 99 / 66 conP: 0.326 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG6093h cluster02 -> 1c9bA2 6.9252851 106 / 66 conP: 0.323 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te VNG6093h cluster03 -> 1df0A 7.1396865 624 / 66 conP: 0.002 NO-CATH VNG6093h cluster04 -> 2hmqA0 7.3540880 113 / 66 conP: 0.334 CATH-ID: 1.20.120.50 Hemerythrin (met) --end-- VNG6094h one-of-top-five-correct: 0.265869428354846 CThresh: 6.369769 75 best_is: cluster02 VNG6094h cluster00 -> 1uox00 6.5350830 295 / 82 conP: 0.047 CATH-ID: 3.10.270.10 Urate oxidase. Chain: null. Synonym: uricase. Biological_unit: tetrame VNG6094h cluster01 -> 1f7cA0 7.5390057 182 / 82 conP: 0.146 CATH-ID: 1.10.555.10 Rhogap protein. Chain: a. Fragment: gtpase activating protein (gap) fo VNG6094h cluster02 -> 1bj4A2 7.5390057 160 / 82 conP: 0.171 CATH-ID: 3.30.70.500 Serine hydroxymethyltransferase. Chain: a. Engineered: yes VNG6094h cluster03 -> 1a4mA0 5.4475206 349 / 82 conP: 0.022 CATH-ID: 3.20.20.140 Adenosine deaminase. Chain: a, b, c, d. Synonym: ada. Engineered: yes VNG6094h cluster04 -> 1mba00 5.7319448 146 / 82 conP: 0.121 CATH-ID: 1.10.490.10 Myoglobin (met) ( p H 7.0) --end-- VNG60972 one-of-top-five-correct: 0.474663372263927 CThresh: 6.994426 73 best_is: cluster16 VNG60972 cluster00 -> 1ad600 6.7032270 185 / 110 conP: 0.171 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG60972 cluster01 -> 1evyA 6.1441091 346 / 110 conP: 0.059 NO-CATH VNG60972 cluster02 -> 2ng101 9.0973333 89 / 110 conP: 0.431 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG60972 cluster03 -> 1c3qA0 6.4191135 272 / 110 conP: 0.098 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy VNG60972 cluster04 -> 2ng101 5.4144011 89 / 110 conP: 0.207 CATH-ID: 1.20.120.140 Signal sequence recognition protein ffh. Chain: null. Fragment: ng gtp VNG60972 cluster16 -> 1fjgO0 9.6875339 88 / 110 conP: 0.474 CATH-TRUNC --end-- VNG6098h one-of-top-five-correct: 0.535634260580653 CThresh: 2.420602 100 best_is: cluster13 VNG6098h cluster00 -> 1vin01 7.1396865 139 / 66 conP: 0.266 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG6098h cluster01 -> 1aisB1 6.7108836 99 / 66 conP: 0.328 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG6098h cluster02 -> 1guxB0 6.9252851 141 / 66 conP: 0.250 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG6098h cluster03 -> 1vin01 7.1396865 139 / 66 conP: 0.266 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG6098h cluster04 -> 2hmqA0 7.7828909 113 / 66 conP: 0.364 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG6098h cluster13 -> 1chkA1 9.2837013 143 / 66 conP: 0.391 CATH-ID: 1.20.141.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes --end-- VNG6105h one-of-top-five-correct: 0.469367226511582 CThresh: 5.544188 75 best_is: cluster13 VNG6105h cluster00 -> 1d1dA2 6.7903434 80 / 88 conP: 0.302 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG6105h cluster01 -> 1bl0A2 5.6522687 60 / 88 conP: 0.268 CATH-ID: 1.10.10.60 DNA (5'- d( Gp Gp Gp Gp Ap Tp Tp Tp Ap Gp Cp Ap Ap Ap Ap Cp Gp Tp Gp G VNG6105h cluster02 -> 2rn200 6.9361750 155 / 88 conP: 0.199 CATH-ID: 3.30.420.10 Ribonuclease h VNG6105h cluster03 -> 1g98A2 6.0675720 195 / 88 conP: 0.124 CATH-ID: 3.40.50.1890 Phosphoglucose isomerase. Chain: a, b. Ec: 5.3.1.9 VNG6105h cluster04 -> 1l1tA 7.7222776 259 / 88 conP: 0.120 NO-CATH VNG6105h cluster13 -> 1d1dA2 9.4726077 80 / 88 conP: 0.484 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes --end-- VNG61062 one-of-top-five-correct: 0.0386008500386268 CThresh: 2.319795 100 best_is: --end-- VNG6109h one-of-top-five-correct: 0.378370703197203 CThresh: 3.741972 75 best_is: cluster05 VNG6109h cluster00 -> 2pgd02 6.2709434 255 / 61 conP: 0.045 CATH-ID: 1.10.570.10 6-phosphogluconate dehydrogenase (6-pgdh) VNG6109h cluster01 -> 1b3uA0 5.6123159 588 / 61 conP: 0.001 CATH-ID: 1.25.30.30 Protein phosphatase pp2a. Chain: a, b. Fragment: 65 kd regulatory subu VNG6109h cluster02 -> 1nkl00 6.0514009 78 / 61 conP: 0.253 CATH-ID: 1.10.225.10 Nk-lysin. Chain: null. Other_details: active by membrane-binding VNG6109h cluster03 -> 1p35A 6.4904859 299 / 61 conP: 0.029 NO-CATH VNG6109h cluster04 -> 1f1zA2 5.8318584 99 / 61 conP: 0.200 CATH-ID: 1.10.10.10 Tnsa endonuclease. Chain: a, b. Synonym: transposase VNG6109h cluster05 -> 1dt9A1 8.2468258 105 / 61 conP: 0.318 CATH-ID: 3.30.960.10 Eukaryotic peptide chain release factor subunit 1. Chain: a. Synonym: --end-- VNG61121 one-of-top-five-correct: 0.0224233071078525 CThresh: 5.699326 75 best_is: --end-- VNG6115h one-of-top-five-correct: 0.327344791552107 CThresh: 7.745859 25 best_is: cluster00 VNG6115h cluster00 -> 1he8A3 8.1977308 111 / 116 conP: 0.316 CATH-ID: 1.25.40.70 Phosphatidylinositol 3-kinase catalytic subunit, gamma isoform. Synony VNG6115h cluster01 -> 1qmmA5 6.5502387 194 / 116 conP: 0.148 CATH-ID: 1.10.1070.11 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG6115h cluster02 -> 1jrxA 4.9941490 568 / 116 conP: 0.012 NO-CATH VNG6115h cluster03 -> 1emuA2 5.5276759 85 / 116 conP: 0.200 CATH-ID: 1.10.167.10 Axin. Chain: a. Fragment: rgs-homologous domain. Engineered: yes. Aden VNG6115h cluster04 -> 2hdhA2 4.7286812 89 / 116 conP: 0.163 CATH-ID: 1.10.770.10 L-3-hydroxyacyl coa dehydrogenase. Chain: a, b. Synonym: schad. Engine --end-- VNG6117h one-of-top-five-correct: 0.199529347521066 CThresh: 2.450866 100 best_is: cluster01 VNG6117h cluster00 -> 1bak00 5.4465578 119 / 40 conP: 0.091 CATH-ID: 2.30.29.30 G-protein coupled receptor kinase 2. Chain: null. Fragment: c-terminal VNG6117h cluster01 -> 191400 5.6954638 171 / 40 conP: 0.042 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG6117h cluster02 -> 1bak00 5.6954638 119 / 40 conP: 0.097 CATH-ID: 2.30.29.30 G-protein coupled receptor kinase 2. Chain: null. Fragment: c-terminal VNG6117h cluster03 -> 191400 5.6954638 171 / 40 conP: 0.042 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG6117h cluster04 -> 1cmxA0 5.0231178 214 / 40 conP: 0.017 CATH-ID: 3.40.532.10 Ubiquitin yuh1-ubal. Chain: a, c. Fragment: all. Engineered: yes. Biol --end-- VNG6120h one-of-top-five-correct: 0.698205742662925 CThresh: 6.084785 75 best_is: cluster01 VNG6120h cluster00 -> 256bA0 7.2789950 106 / 111 conP: 0.333 CATH-ID: 1.20.120.10 Cytochrome b562 (oxidized) VNG6120h cluster01 -> 1cpq00 11.826092 129 / 111 conP: 0.616 CATH-ID: 1.20.120.10 Cytochrome c'. Chain: null VNG6120h cluster02 -> 1fapB0 8.2645623 95 / 111 conP: 0.416 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG6120h cluster03 -> 1fapB0 7.6828107 95 / 111 conP: 0.376 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG6120h cluster04 -> 1guxB0 6.6834976 141 / 111 conP: 0.252 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer --end-- VNG6125h one-of-top-five-correct: 0.249975425331062 CThresh: 6.960424 60 best_is: cluster12 VNG6125h cluster00 -> 1l0wA 5.3807557 580 / 97 conP: 0.006 NO-CATH VNG6125h cluster01 -> 1hlkA 4.9484698 227 / 97 conP: 0.067 NO-CATH VNG6125h cluster02 -> 1cjsA1 6.7218511 121 / 97 conP: 0.206 CATH-ID: 3.30.190.20 50s ribosomal protein l1p. Chain: a. Engineered: yes VNG6125h cluster03 -> 1d0nA5 5.1788735 96 / 97 conP: 0.166 CATH-ID: 3.40.20.10 Horse plasma gelsolin. Chain: a, b VNG6125h cluster04 -> 1ykfA2 5.0973344 131 / 97 conP: 0.131 CATH-ID: 3.40.50.720 NADP-dependent alcohol dehydrogenase. Chain: a, b, c, d. Engineered: y VNG6125h cluster12 -> 1fjgB1 7.2379312 175 / 97 conP: 0.169 CATH-TRUNC --end-- VNG6126h one-of-top-five-correct: 0.29435225138781 CThresh: 7.065476 25 best_is: cluster01 VNG6126h cluster00 -> 1a7602 6.5348076 60 / 101 conP: 0.280 CATH-ID: 1.10.150.20 Flap endonuclease-1 protein. Chain: null VNG6126h cluster01 -> 1ja0A 7.8088126 607 / 101 conP: 0.013 NO-CATH VNG6126h cluster02 -> 1ddt02 5.4097421 180 / 101 conP: 0.109 CATH-ID: 1.10.490.40 Diphtheria toxin (dimeric) VNG6126h cluster03 -> 1vhbA0 5.9262696 135 / 101 conP: 0.162 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a, b. Synonym: soluble cytochrome o. Engineered: ye VNG6126h cluster04 -> 1f7cA0 5.4778511 182 / 101 conP: 0.110 CATH-ID: 1.10.555.10 Rhogap protein. Chain: a. Fragment: gtpase activating protein (gap) fo --end-- VNG6133h one-of-top-five-correct: 0.370027988120042 CThresh: 3.400161 75 best_is: cluster16 VNG6133h cluster00 -> 1a8y02 6.4496071 102 / 57 conP: 0.218 CATH-ID: 3.40.30.10 Calsequestrin. Chain: null VNG6133h cluster01 -> 2mtaC0 4.8812285 147 / 57 conP: 0.093 CATH-ID: 1.10.1250.10 Methylamine dehydrogenase complex with amicyanin and cytochrome c551i VNG6133h cluster02 -> 1cd800 5.9610348 114 / 57 conP: 0.173 CATH-ID: 2.60.40.10 Cd8 (t cell c0-receptor, n-terminal 114 residues) VNG6133h cluster03 -> 1a6o02 6.6736612 236 / 57 conP: 0.054 CATH-ID: 1.10.510.10 Protein kinase ck2/alpha-subunit. Chain: null. Engineered: yes VNG6133h cluster04 -> 1ptf00 5.5240027 87 / 57 conP: 0.204 CATH-ID: 3.30.70.90 Histidine-containing phosphocarrier protein (hpr) VNG6133h cluster16 -> 1apa01 8.0853608 177 / 57 conP: 0.151 CATH-ID: 3.40.420.10 Pokeweed antiviral protein (alpha) --end-- VNG6134h one-of-top-five-correct: 0.401311864536372 CThresh: 4.058771 75 best_is: cluster00 VNG6134h cluster00 -> 1qi7A1 8.6318129 178 / 62 conP: 0.179 CATH-ID: 3.40.420.10 N-glycosidase. Chain: a. Ec: 3.2.2.22 VNG6134h cluster01 -> 1apa01 7.5394498 177 / 62 conP: 0.139 CATH-ID: 3.40.420.10 Pokeweed antiviral protein (alpha) VNG6134h cluster02 -> 1tmy00 7.4040659 118 / 62 conP: 0.232 CATH-ID: 3.40.50.3000 Chey protein. Chain: null. Synonym: tmy. Engineered: yes. Biological_u VNG6134h cluster03 -> 1itg00 5.3462270 142 / 62 conP: 0.113 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant VNG6134h cluster04 -> 1k3fA 6.5400600 253 / 62 conP: 0.049 NO-CATH --end-- VNG61351 one-of-top-five-correct: 0.461432069316461 CThresh: 3.869289 75 best_is: cluster03 VNG61351 cluster00 -> 1jinA0 7.5759061 403 / 81 conP: 0.042 CATH-ID: 1.10.630.10 Cytochrome p450 107a1. Chain: a. Synonym: 6-deoxyerythronolide b hydro VNG61351 cluster01 -> 2a3dA0 7.1364653 73 / 81 conP: 0.401 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes VNG61351 cluster02 -> 1ddbA0 7.0711396 195 / 81 conP: 0.186 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer VNG61351 cluster03 -> 1e7aA5 8.7851044 112 / 81 conP: 0.435 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG61351 cluster04 -> 1e7aA5 7.0594424 112 / 81 conP: 0.319 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG61391 one-of-top-five-correct: 0.321906086988199 CThresh: 6.992984 41 best_is: cluster17 VNG61391 cluster00 -> 1e6uA1 5.1867555 220 / 125 conP: 0.122 CATH-ID: 3.40.50.720 Gdp-fucose synthetase. Chain: a. Synonym: gdp-4-keto 6-deoxy-mannose 3 VNG61391 cluster01 -> 1f02T0 5.3174554 66 / 125 conP: 0.255 CATH-ID: 4.10.820.10 Intimin. Chain: i. Fragment: c-terminal domain (282 residues). Enginee VNG61391 cluster02 -> 1utg00 5.6086329 70 / 125 conP: 0.267 CATH-ID: 1.10.210.10 Uteroglobin (oxidized) VNG61391 cluster03 -> 1qo0D2 6.7979811 46 / 125 conP: 0.370 CATH-ID: 1.10.15.10 Amic. Chain: a, b. Fragment: amide receptor. Engineered: yes. Other_de VNG61391 cluster04 -> 1eo0A0 6.9110299 77 / 125 conP: 0.338 CATH-ID: 1.20.930.10 Transcription elongation factor s-ii. Chain: a. Fragment: domain i. En VNG61391 cluster17 -> 1jud02 7.5834496 75 / 125 conP: 0.385 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG6141h one-of-top-five-correct: 0.380096086203195 CThresh: 2.453031 100 best_is: cluster10 VNG6141h cluster00 -> 1vin01 6.5929713 139 / 66 conP: 0.235 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG6141h cluster01 -> 2hmqA0 7.3540880 113 / 66 conP: 0.335 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG6141h cluster02 -> 1efuB2 6.4964821 86 / 66 conP: 0.343 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran VNG6141h cluster03 -> 1aua02 6.3551625 83 / 66 conP: 0.341 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG6141h cluster04 -> 1fnnA1 7.3540880 101 / 66 conP: 0.364 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG6141h cluster10 -> 1fnnA1 7.5684895 101 / 66 conP: 0.378 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer --end-- VNG61443 one-of-top-five-correct: 0.217594980634185 CThresh: 4.977244 75 best_is: cluster01 VNG61443 cluster00 -> 1kdxA0 4.7728150 81 / 54 conP: 0.126 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG61443 cluster01 -> 1amp00 6.8221840 291 / 54 conP: 0.017 CATH-ID: 3.40.630.10 Aminopeptidase (aeromonas proteolytica) VNG61443 cluster02 -> 1cei00 6.3667687 85 / 54 conP: 0.178 CATH-ID: 1.10.1200.20 Colicin e7 immunity protein. Chain: null. Synonym: imme7 VNG61443 cluster03 -> 1bs2A3 5.4559380 131 / 54 conP: 0.084 CATH-ID: 3.30.1000.10 Arginyl-tRNA synthetase. Chain: a. Synonym: argrs, arginine - tRNA lig VNG61443 cluster04 -> 1mudA1 4.8768096 113 / 54 conP: 0.089 CATH-ID: 1.10.15.10 Adenine glycosylase. Chain: a. Fragment: catalytic domain. Mutation: y --end-- VNG6146h one-of-top-five-correct: 0.418896671216032 CThresh: 2.421646 100 best_is: cluster02 VNG6146h cluster00 -> 1vin01 6.9252851 139 / 66 conP: 0.254 CATH-ID: 1.10.472.10 Cyclin a. Chain: null. Engineered: yes. Mutation: s171g, del(1-170). O VNG6146h cluster01 -> 1bq7A0 6.9252851 186 / 66 conP: 0.171 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG6146h cluster02 -> 1fnnA1 7.9972924 101 / 66 conP: 0.409 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG6146h cluster03 -> 1aisB1 6.2820806 99 / 66 conP: 0.301 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG6146h cluster04 -> 2hmqA0 6.8940814 113 / 66 conP: 0.307 CATH-ID: 1.20.120.50 Hemerythrin (met) --end-- VNG61472 one-of-top-five-correct: 0.0391657467903263 CThresh: 2.228549 100 best_is: --end-- VNG6155h one-of-top-five-correct: 0.274739427488995 CThresh: 6.951932 27 best_is: cluster14 VNG6155h cluster00 -> 1jilA 5.5895446 323 / 102 conP: 0.048 NO-CATH VNG6155h cluster01 -> 2reb02 6.5800857 59 / 102 conP: 0.291 CATH-ID: 3.30.250.10 Reca protein VNG6155h cluster02 -> 1amoA3 6.8237655 126 / 102 conP: 0.218 CATH-ID: 1.20.990.10 NADPH-cytochrome p450 reductase. Chain: a, b. Fragment: hydrophilic do VNG6155h cluster03 -> 1aoa01 4.6274449 118 / 102 conP: 0.135 CATH-ID: 1.10.418.10 T-fimbrin. Chain: null. Fragment: abd1 VNG6155h cluster04 -> 1tgoA5 6.6264367 178 / 102 conP: 0.156 CATH-ID: 3.90.710.10 Thermostable b DNA polymerase. Chain: a. Engineered: yes VNG6155h cluster14 -> 1a1w00 7.4707330 83 / 102 conP: 0.311 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f --end-- VNG6156h one-of-top-five-correct: 0.174561757615717 CThresh: 10.364559 25 best_is: cluster11 VNG6156h cluster00 -> 1cby00 4.3080804 227 / 134 conP: 0.053 CATH-ID: 3.40.198.10 Delta-endotoxin cytb. Chain: null. Engineered: yes VNG6156h cluster01 -> 1tfe02 5.4161265 45 / 134 conP: 0.167 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG6156h cluster02 -> 1k82A 6.1279102 260 / 134 conP: 0.074 NO-CATH VNG6156h cluster03 -> 1fjgB2 5.3547235 62 / 134 conP: 0.153 CATH-TRUNC VNG6156h cluster04 -> 2occA0 4.7713845 514 / 134 conP: 0.014 CATH-ID: 1.20.210.10 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG6156h cluster11 -> 1sctA0 6.6939409 149 / 134 conP: 0.144 CATH-ID: 1.10.490.10 Hemoglobin. Heterogen: carbon monoxide --end-- VNG6157h one-of-top-five-correct: 0.378255016095021 CThresh: 9.072832 25 best_is: cluster12 VNG6157h cluster00 -> 1bf5A4 6.9704046 112 / 137 conP: 0.234 CATH-ID: 3.30.505.10 Stat-1. Chain: a. Engineered: yes. Biological_unit: dimer. DNA. Chain: VNG6157h cluster01 -> 1bf5A4 7.2403247 112 / 137 conP: 0.249 CATH-ID: 3.30.505.10 Stat-1. Chain: a. Engineered: yes. Biological_unit: dimer. DNA. Chain: VNG6157h cluster02 -> 1mil00 6.0081979 104 / 137 conP: 0.195 CATH-ID: 3.30.505.10 Shc adaptor protein. Chain: null. Fragment: phosphotyrosine recognitio VNG6157h cluster03 -> 1qqnA3 5.1467287 89 / 137 conP: 0.169 CATH-ID: 3.30.420.50 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG6157h cluster04 -> 1ijrA 6.7352199 104 / 137 conP: 0.230 NO-CATH VNG6157h cluster12 -> 1pvdA1 8.9325296 179 / 137 conP: 0.277 CATH-ID: 3.40.50.970 Pyruvate decarboxylase (pdc) --end-- VNG6158h one-of-top-five-correct: 0.266634192651413 CThresh: 4.506330 75 best_is: cluster02 VNG6158h cluster00 -> 1lla01 6.9271692 357 / 52 conP: 0.007 CATH-ID: 1.10.639.10 Hemocyanin (subunit type ii) VNG6158h cluster01 -> 1rypB0 6.4665934 250 / 52 conP: 0.025 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG6158h cluster02 -> 1e68A0 7.3877451 70 / 52 conP: 0.273 CATH-ID: 1.20.225.10 Bacteriocin as-48. Chain: a. Fragment: bacteriocin as-48 residue 36-10 VNG6158h cluster03 -> 1ae9A0 6.0060175 171 / 52 conP: 0.061 CATH-ID: 1.10.443.10 Lambda integrase. Chain: a, b. Fragment: catalytic domain. Engineered: VNG6158h cluster04 -> 1dnyA0 5.5454416 76 / 52 conP: 0.169 CATH-ID: 1.10.1200.10 Non-ribosomal peptide synthetase peptidyl carrier protein. Chain: a. F --end-- VNG6159h one-of-top-five-correct: 0.240910046090206 CThresh: 1.917864 100 best_is: cluster10 VNG6159h cluster00 -> 1dioA 6.0694368 551 / 42 conP: 0.000 NO-CATH VNG6159h cluster01 -> 1elwA0 5.5787286 117 / 42 conP: 0.120 CATH-ID: 1.25.40.10 Tpr1-domain of hop. Chain: a, b. Fragment: n-terminal domain. Engineer VNG6159h cluster02 -> 1a1700 5.6479712 159 / 42 conP: 0.065 CATH-ID: 1.25.40.10 Serine/threonine protein phosphatase 5. Chain: null. Fragment: protein VNG6159h cluster03 -> 1pbv01 5.3333745 82 / 42 conP: 0.185 CATH-ID: 1.10.220.20 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: VNG6159h cluster04 -> 1i6kA 5.5787286 316 / 42 conP: 0.005 NO-CATH VNG6159h cluster10 -> 1eyvA0 6.0694368 131 / 42 conP: 0.111 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr --end-- VNG6160h one-of-top-five-correct: 0.263212742867066 CThresh: 4.967254 75 best_is: cluster06 VNG6160h cluster00 -> 1fts01 6.6655592 84 / 62 conP: 0.226 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG6160h cluster01 -> 1yub02 6.6273318 80 / 62 conP: 0.232 CATH-ID: 1.10.221.10 Rrna methyltransferase. Chain: null. Synonym: ermam. Engineered: yes. VNG6160h cluster02 -> 1eyvA0 5.5731961 131 / 62 conP: 0.111 CATH-ID: 1.10.940.10 N-utilizing substance protein b homolog. Chain: a, b. Synonym: nusb pr VNG6160h cluster03 -> 2sns00 5.2440511 141 / 62 conP: 0.092 CATH-ID: 2.40.50.90 Staphylococcal nuclease complex with 2(prime)-deoxy-3(prime)-5(prime)- VNG6160h cluster04 -> 1g4aA0 6.2286140 173 / 62 conP: 0.086 CATH-ID: 3.60.20.10 Atp-dependent hsl protease atp-binding subunit hslu. Chain: e, f. Syno VNG6160h cluster06 -> 1fchA0 7.3209771 302 / 62 conP: 0.029 CATH-ID: 1.25.40.140 Peroxisomal targeting signal 1 receptor. Chain: a, b. Fragment: c-term --end-- VNG61612 one-of-top-five-correct: 0.0388374550556265 CThresh: 2.281422 100 best_is: --end-- VNG6163h one-of-top-five-correct: 0.282022145421806 CThresh: 6.999656 57 best_is: cluster03 VNG6163h cluster00 -> 1ecbA1 5.8276370 321 / 116 conP: 0.072 CATH-ID: 3.60.20.10 Glutamine phosphoribosylpyrophosphate amidotransferase. Chain: a, b, c VNG6163h cluster01 -> 1jslA 5.5883836 324 / 116 conP: 0.067 NO-CATH VNG6163h cluster02 -> 1asu00 5.8604813 162 / 116 conP: 0.170 CATH-ID: 3.30.420.10 Avian sarcoma virus integrase. Chain: null. Domain: catalytic core dom VNG6163h cluster03 -> 1dik04 7.2728404 343 / 116 conP: 0.094 CATH-ID: 3.20.20.60 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG6163h cluster04 -> 1guyA 5.6469866 296 / 116 conP: 0.079 NO-CATH --end-- VNG6165h one-of-top-five-correct: 0.284513223292455 CThresh: 7.334640 25 best_is: cluster04 VNG6165h cluster00 -> 1g6uA0 6.5165790 48 / 106 conP: 0.294 CATH-ID: 1.20.15.270 Domain swapped dimer. Chain: a, b. Engineered: yes VNG6165h cluster01 -> 1agsA 6.6115615 221 / 106 conP: 0.120 NO-CATH VNG6165h cluster02 -> 1dtoA1 4.4684245 102 / 106 conP: 0.139 CATH-ID: 1.10.287.30 Regulatory protein e2. Chain: a. Fragment: transactivation domain. Eng VNG6165h cluster03 -> 1bw0A1 5.4973886 145 / 106 conP: 0.140 CATH-ID: 3.30.70.160 Tyrosine aminotransferase. Chain: a, b. Synonym: tat. Ec: 2.6.1.5 VNG6165h cluster04 -> 2a3dA0 7.6860523 73 / 106 conP: 0.331 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG6168h one-of-top-five-correct: 0.382359685015714 CThresh: 4.904378 75 best_is: cluster18 VNG6168h cluster00 -> 1e8mA2 7.8223796 353 / 82 conP: 0.057 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG6168h cluster01 -> 1e8mA2 6.9366521 353 / 82 conP: 0.044 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG6168h cluster02 -> 1crzA2 8.3238947 260 / 82 conP: 0.133 CATH-ID: 2.130.10.20 Tolb protein. Chain: a. Engineered: yes VNG6168h cluster03 -> 1e8mA2 8.1413594 353 / 82 conP: 0.062 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG6168h cluster04 -> 1jrqA 6.7358675 717 / 82 conP: 0.002 NO-CATH VNG6168h cluster18 -> 1dim00 8.3421439 381 / 82 conP: 0.052 CATH-ID: 2.120.10.10 Sialidase. Chain: null. Engineered: yes --end-- VNG6170h one-of-top-five-correct: 0.469248525223241 CThresh: 8.976344 25 best_is: cluster02 VNG6170h cluster00 -> 1f02T0 6.5627039 66 / 127 conP: 0.242 CATH-ID: 4.10.820.10 Intimin. Chain: i. Fragment: c-terminal domain (282 residues). Enginee VNG6170h cluster01 -> 1dlc01 7.8902535 229 / 127 conP: 0.160 CATH-ID: 1.20.190.10 Delta-endotoxin cryiiia (bt13) VNG6170h cluster02 -> 256bA0 10.139776 106 / 127 conP: 0.419 CATH-ID: 1.20.120.10 Cytochrome b562 (oxidized) VNG6170h cluster03 -> 1ytfB0 6.3203004 46 / 127 conP: 0.250 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG6170h cluster04 -> 1lbd00 6.1851310 238 / 127 conP: 0.100 CATH-ID: 1.10.565.10 Retinoid x receptor. Chain: null. Fragment: histidine tag plus domain --end-- VNG61791 one-of-top-five-correct: 0.412112931737635 CThresh: 5.826061 75 best_is: cluster04 VNG61791 cluster00 -> 1ytn00 6.1270873 283 / 116 conP: 0.122 CATH-ID: 3.90.190.10 Yersinia protein tyrosine phosphatase. Chain: null. Fragment: catalyti VNG61791 cluster01 -> 3daaA1 6.7537642 118 / 116 conP: 0.311 CATH-ID: 3.30.470.10 D-amino acid aminotransferase. Chain: a, b. Engineered: yes. Biologica VNG61791 cluster02 -> 1vhbA0 6.7123787 135 / 116 conP: 0.287 CATH-ID: 1.10.490.10 Hemoglobin. Chain: a, b. Synonym: soluble cytochrome o. Engineered: ye VNG61791 cluster03 -> 1evqA0 6.7789728 304 / 116 conP: 0.129 CATH-ID: 3.40.50.950 Serine hydrolase. Chain: a. Engineered: yes VNG61791 cluster04 -> 1et0A1 8.3262415 108 / 116 conP: 0.430 CATH-ID: 3.30.470.10 4-amino-4-deoxychorismate lyase. Chain: a. Synonym: adc lyase. Enginee --end-- VNG6180h one-of-top-five-correct: 0.534913327054725 CThresh: 7.826884 25 best_is: cluster00 VNG6180h cluster00 -> 1bwoA0 10.543512 90 / 118 conP: 0.509 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 VNG6180h cluster01 -> 1tfe02 5.6565275 45 / 118 conP: 0.249 CATH-ID: 1.20.12.10 Elongation factor ts. Chain: null. Fragment: ef-ts dimerization domain VNG6180h cluster02 -> 1dceA1 6.7339510 317 / 118 conP: 0.083 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG6180h cluster03 -> 1fapB0 7.4858375 95 / 118 conP: 0.294 CATH-ID: 1.20.120.150 Fk506-binding protein. Chain: a. Synonym: fkbp12. Engineered: yes. Fra VNG6180h cluster04 -> 1bwoA0 6.9805284 90 / 118 conP: 0.271 CATH-ID: 1.10.110.10 Nonspecific lipid-transfer protein. Chain: a, b. Synonym: ns-ltp1 --end-- VNG61811 one-of-top-five-correct: 0.015538489809597 CThresh: 7.955718 25 best_is: --end-- VNG6182h one-of-top-five-correct: 0.494053315666558 CThresh: 6.152490 75 best_is: cluster00 VNG6182h cluster00 -> 1mnmA 9.1083994 85 / 128 conP: 0.535 NO-CATH VNG6182h cluster01 -> 1mnmA 7.3278101 85 / 128 conP: 0.407 NO-CATH VNG6182h cluster02 -> 1lfaA0 6.3965532 183 / 128 conP: 0.235 CATH-ID: 3.40.50.410 Cd11a. Chain: a, b. Domain: i-domain residues 125 - 311. Synonym: lfa- VNG6182h cluster03 -> 1mnmA 8.1106511 85 / 128 conP: 0.463 NO-CATH VNG6182h cluster04 -> 1mnmA 8.4247495 85 / 128 conP: 0.485 NO-CATH --end-- VNG61831 one-of-top-five-correct: 0.300770977373238 CThresh: 5.778894 75 best_is: cluster17 VNG61831 cluster00 -> 1celA0 6.7440446 434 / 101 conP: 0.040 CATH-ID: 2.70.100.10 1,4-beta-d-glucan cellobiohydrolase i (cellulase) VNG61831 cluster01 -> 1d2tA 5.9200195 222 / 101 conP: 0.124 NO-CATH VNG61831 cluster02 -> 1fjgB2 5.5731961 62 / 101 conP: 0.280 CATH-TRUNC VNG61831 cluster03 -> 1huxA1 5.6133258 117 / 101 conP: 0.212 CATH-ID: 3.30.420.70 Activator of (r)-2-hydroxyglutaryl-coa dehydratase. Chain: a, b. Engin VNG61831 cluster04 -> 1b63A1 5.3413807 216 / 101 conP: 0.111 CATH-ID: 3.30.565.10 Mutl. Chain: a. Fragment: atpase fragment. Engineered: yes. Biological VNG61831 cluster17 -> 1pjcA1 7.3094041 185 / 101 conP: 0.215 CATH-ID: 3.40.50.1770 L-alanine dehydrogenase. Chain: a. Engineered: yes. Biological_unit: h --end-- VNG6185h one-of-top-five-correct: 0.300710637117731 CThresh: 5.555832 75 best_is: cluster14 VNG6185h cluster00 -> 1fjgK0 6.1805783 119 / 58 conP: 0.117 CATH-TRUNC VNG6185h cluster01 -> 1bgw01 5.7666012 43 / 58 conP: 0.228 CATH-ID: 2.30.35.40 Topoisomerase. Chain: null. Fragment: residues 410 - 1202. Engineered: VNG6185h cluster02 -> 1cyx00 5.2890199 158 / 58 conP: 0.060 CATH-ID: 2.60.40.420 Cyoa. Chain: null. Fragment: periplasmic fragment (residues 111 - 315) VNG6185h cluster03 -> 1phb00 4.6203511 405 / 58 conP: 0.003 CATH-ID: 1.10.630.10 Cytochrome p450-cam (camphor 5-monoxygenase) complex with camphor (min VNG6185h cluster04 -> 1aa7A2 4.7305715 78 / 58 conP: 0.125 CATH-ID: 1.10.10.180 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG6185h cluster14 -> 1bvzA3 8.1865848 82 / 58 conP: 0.270 CATH-ID: 2.60.40.1180 Alpha-amylase ii. Chain: a, b. Fragment: n,a,b.C. Engineered: yes --end-- VNG6186h one-of-top-five-correct: 0.579527586354984 CThresh: 7.586665 25 best_is: cluster10 VNG6186h cluster00 -> 1ffyA1 6.6884874 372 / 114 conP: 0.057 CATH-ID: 3.40.510.10 Isoleucyl-tRNA synthetase. Chain: a. Synonym: isoleucine--tRNA ligase, VNG6186h cluster01 -> 1e7aA3 6.5872484 92 / 114 conP: 0.248 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6186h cluster02 -> 1ytfB0 5.6037793 46 / 114 conP: 0.248 CATH-ID: 1.20.15.70 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG6186h cluster03 -> 1kdxA0 6.2818012 81 / 114 conP: 0.244 CATH-ID: 1.10.246.20 Cbp. Chain: a. Fragment: kix, residues 586-666. Synonym: creb-binding VNG6186h cluster04 -> 1qvaA0 6.1708605 213 / 114 conP: 0.122 CATH-ID: 3.40.50.300 Initiation factor 4a. Chain: a. Fragment: residues 2-224. Synonym: eif VNG6186h cluster10 -> 1a6dA1 11.021023 244 / 114 conP: 0.318 CATH-ID: 1.10.560.10 Thermosome. Chain: a, b. Biological_unit: hexadecamer --end-- VNG6188h one-of-top-five-correct: 0.408066266834856 CThresh: 6.967050 73 best_is: cluster05 VNG6188h cluster00 -> 1b3qA1 7.1025045 62 / 106 conP: 0.328 CATH-ID: 1.20.15.220 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG6188h cluster01 -> 1flp00 7.3859985 142 / 106 conP: 0.238 CATH-ID: 1.10.490.10 Hemoglobin i (monomeric) (ferric) VNG6188h cluster02 -> 1ivhA3 6.6115615 141 / 106 conP: 0.201 CATH-ID: 1.20.140.10 Isovaleryl-coa dehydrogenase. Chain: a, b, c, d. Engineered: yes. Biol VNG6188h cluster03 -> 1lbkA 6.0544751 208 / 106 conP: 0.121 NO-CATH VNG6188h cluster04 -> 1ew6A0 6.4697285 137 / 106 conP: 0.198 CATH-ID: 1.10.490.10 Dehaloperoxidase. Chain: a, b VNG6188h cluster05 -> 1lbkA 9.0256029 208 / 106 conP: 0.245 NO-CATH --end-- VNG6191h one-of-top-five-correct: 0.275767824681299 CThresh: 6.993067 59 best_is: cluster11 VNG6191h cluster00 -> 1qf6A5 6.7692984 102 / 88 conP: 0.207 CATH-ID: 3.40.50.800 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch VNG6191h cluster01 -> 1pbwA0 5.4826673 184 / 88 conP: 0.086 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG6191h cluster02 -> 1vnc01 5.1674443 176 / 88 conP: 0.084 CATH-ID: 1.20.144.10 Vanadium-containing chloroperoxidase. Chain: null. Ec: 1.11.1.10 VNG6191h cluster03 -> 1bgvA1 5.2876990 167 / 88 conP: 0.092 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer VNG6191h cluster04 -> 1qmeA2 4.3128578 350 / 88 conP: 0.018 CATH-ID: 3.40.710.10 Penicillin-binding protein 2x. Chain: a. Engineered: yes VNG6191h cluster11 -> 1c3qA0 7.8222863 272 / 88 conP: 0.084 CATH-ID: 3.90.77.20 His tag. Chain: x, y, z. Synonym: thz kinase. Engineered: yes. Hydroxy --end-- VNG6193h one-of-top-five-correct: 0.373470555664046 CThresh: 4.421657 75 best_is: cluster10 VNG6193h cluster00 -> 1bu2A1 6.9751332 112 / 91 conP: 0.324 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG6193h cluster01 -> 1gab00 6.6450636 53 / 91 conP: 0.407 CATH-ID: 1.10.8.40 Protein pab. Chain: null. Fragment: albumin-binding domain, residues 2 VNG6193h cluster02 -> 1cuk03 6.9175592 48 / 91 conP: 0.436 CATH-ID: 1.10.8.10 Ruva protein. Chain: null. Engineered: yes VNG6193h cluster03 -> 1aua02 7.2435364 83 / 91 conP: 0.393 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG6193h cluster04 -> 1af701 6.6088245 80 / 91 conP: 0.356 CATH-ID: 1.10.155.10 Chemotaxis receptor methyltransferase cher. Chain: null. Engineered: y VNG6193h cluster10 -> 1ef7A0 7.8147784 242 / 91 conP: 0.184 CATH-ID: 3.90.70.10 Cathepsin x. Chain: a, b. Ec: 3.4.18.1 --end-- VNG6194h one-of-top-five-correct: 0.342253396249722 CThresh: 1.545409 100 best_is: cluster11 VNG6194h cluster00 -> 1jflA 6.8602591 228 / 49 conP: 0.057 NO-CATH VNG6194h cluster01 -> 1l6sA 6.8602591 322 / 49 conP: 0.016 NO-CATH VNG6194h cluster02 -> 1jflA 6.3914577 228 / 49 conP: 0.050 NO-CATH VNG6194h cluster03 -> 1jflA 6.8602591 228 / 49 conP: 0.057 NO-CATH VNG6194h cluster04 -> 1jflA 7.0946598 228 / 49 conP: 0.061 NO-CATH VNG6194h cluster11 -> 1aw500 7.0946598 321 / 49 conP: 0.017 CATH-ID: 3.20.20.230 5-aminolevulinate dehydratase. Chain: null. Synonym: porphobilinogen s --end-- VNG6195h one-of-top-five-correct: 0.327670982195353 CThresh: 6.966223 35 best_is: cluster14 VNG6195h cluster00 -> 1qkrA0 5.1588997 172 / 92 conP: 0.093 CATH-ID: 1.20.120.230 Vinculin. Chain: a, b. Fragment: c-terminal domain. Synonym: tail doma VNG6195h cluster01 -> 1pbe01 3.5191272 231 / 92 conP: 0.039 CATH-ID: 3.50.50.60 P-hydroxybenzoate hydroxylase (phbh) complexed with p-hydroxybenzoic a VNG6195h cluster02 -> 1ku3A 4.7341459 61 / 92 conP: 0.175 NO-CATH VNG6195h cluster03 -> 1jud02 6.5727001 75 / 92 conP: 0.245 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG6195h cluster04 -> 1derA2 5.3239044 94 / 92 conP: 0.164 CATH-ID: 3.30.260.10 Groel. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n. Engineered: ye VNG6195h cluster14 -> 1ns1A0 8.3947017 73 / 92 conP: 0.357 CATH-ID: 1.10.287.10 Nonstructural protein 1. Chain: a, b. Fragment: RNA-binding domain, re --end-- VNG6197h one-of-top-five-correct: 0.342550587911524 CThresh: 2.557275 100 best_is: cluster08 VNG6197h cluster00 -> 1l1lA 5.9142099 717 / 56 conP: 0.000 NO-CATH VNG6197h cluster01 -> 1a6f00 5.5958156 113 / 56 conP: 0.182 CATH-ID: 3.30.230.10 Ribonuclease p protein. Chain: null. Synonym: rnase p protein. Enginee VNG6197h cluster02 -> 1fehA5 5.8210601 211 / 56 conP: 0.065 CATH-ID: 3.40.950.10 Periplasmic hydrogenase 1. Chain: a. Ec: 1.18.99.1 VNG6197h cluster03 -> 1taq05 6.8038823 127 / 56 conP: 0.210 CATH-ID: 3.30.70.370 Taq DNA polymerase. Chain: null. Synonym: taq. Engineered: yes. Mutati VNG6197h cluster04 -> 1di6A0 6.0463047 183 / 56 conP: 0.096 CATH-ID: 3.40.980.10 Molybdenum cofactor biosythetic enzyme. Chain: a. Synonym: moga. Engin VNG6197h cluster08 -> 1es8A0 7.3977721 192 / 56 conP: 0.123 CATH-ID: 3.40.91.20 Restriction endonuclease bglii. Chain: a. Engineered: yes --end-- VNG6198h one-of-top-five-correct: 0.396443671952181 CThresh: 2.801988 100 best_is: cluster02 VNG6198h cluster00 -> 1qsaA2 8.1884300 70 / 54 conP: 0.422 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG6198h cluster01 -> 1lla01 7.5053070 357 / 54 conP: 0.014 CATH-ID: 1.10.639.10 Hemocyanin (subunit type ii) VNG6198h cluster02 -> 1e8xA3 8.1884300 185 / 54 conP: 0.141 CATH-ID: 1.25.40.110 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p VNG6198h cluster03 -> 1gln05 7.7330147 98 / 54 conP: 0.308 CATH-ID: 1.10.10.350 Glutamyl-tRNA synthetase. Chain: null VNG6198h cluster04 -> 1qsaA2 7.9607224 70 / 54 conP: 0.406 CATH-ID: 1.10.1240.20 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein --end-- VNG61992 one-of-top-five-correct: 0.521901356831452 CThresh: 3.649670 75 best_is: cluster03 VNG61992 cluster00 -> 1dceA1 6.1023505 317 / 83 conP: 0.064 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG61992 cluster01 -> 1ad600 9.1030643 185 / 83 conP: 0.332 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG61992 cluster02 -> 1dceA1 6.1023505 317 / 83 conP: 0.064 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG61992 cluster03 -> 1uby00 9.3031119 348 / 83 conP: 0.117 CATH-ID: 1.10.600.10 Farnesyl diphosphate synthase. Chain: null. Synonym: fps. Engineered: VNG61992 cluster04 -> 1qgkA 7.5026836 876 / 83 conP: 0.001 CATH-TRUNC --end-- VNG6204h one-of-top-five-correct: 0.410147422978249 CThresh: 6.971203 28 best_is: cluster15 VNG6204h cluster00 -> 1e7aA2 8.2393276 90 / 121 conP: 0.401 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6204h cluster01 -> 1e7aA2 7.6537645 90 / 121 conP: 0.361 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6204h cluster02 -> 1e7aA2 8.0441399 90 / 121 conP: 0.388 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6204h cluster03 -> 1bg8A0 7.5642157 76 / 121 conP: 0.374 CATH-ID: 1.10.890.10 Hdea. Chain: a, b, c. Synonym: 10k-s protein, hypothetical protein a VNG6204h cluster04 -> 1e7aA2 7.8489522 90 / 121 conP: 0.374 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6204h cluster15 -> 1e7aA6 8.7094984 78 / 121 conP: 0.451 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG6209h one-of-top-five-correct: 0.205371427630534 CThresh: 3.384831 75 best_is: cluster15 VNG6209h cluster00 -> 1agrE1 3.9318966 47 / 46 conP: 0.177 CATH-ID: 1.10.196.10 Guanine nucleotide-binding protein g(i). Chain: a, d. Fragment: alpha- VNG6209h cluster01 -> 1agsA 4.1707370 221 / 46 conP: 0.016 NO-CATH VNG6209h cluster02 -> 1dvh00 4.5067834 79 / 46 conP: 0.135 CATH-ID: 1.10.1250.10 Cytochrome c553 (reduced) (nmr, 36 structures) VNG6209h cluster03 -> 1fc3A0 5.6037793 119 / 46 conP: 0.104 CATH-ID: 1.10.10.60 Spo0a. Chain: a, b, c. Fragment: c-terminal domain. Synonym: sporulati VNG6209h cluster04 -> 1jmsA 4.4095774 360 / 46 conP: 0.002 NO-CATH VNG6209h cluster15 -> 1esc00 6.0814600 302 / 46 conP: 0.008 CATH-ID: 3.40.50.1110 Esterase. Chain: null --end-- VNG62130 one-of-top-five-correct: 0.427368029268849 CThresh: 6.999208 40 best_is: cluster03 VNG62130 cluster00 -> 1a0aA0 4.6651824 63 / 99 conP: 0.181 CATH-ID: 4.10.280.10 Phosphate system positive regulatory protein pho4. Chain: a, b. Fragme VNG62130 cluster01 -> 3ygsP0 5.3133198 97 / 99 conP: 0.173 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: c. Fragment: caspase re VNG62130 cluster02 -> 1cojA0 5.6618249 211 / 99 conP: 0.094 CATH-ID: 3.90.149.10 Superoxide dismutase. Chain: a. Engineered: yes. Biological_unit: homo VNG62130 cluster03 -> 1abv00 9.4168529 105 / 99 conP: 0.392 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi VNG62130 cluster04 -> 1ddt02 6.6443672 180 / 99 conP: 0.146 CATH-ID: 1.10.490.40 Diphtheria toxin (dimeric) --end-- VNG62160 one-of-top-five-correct: 0.320294481917543 CThresh: 6.996439 65 best_is: cluster14 VNG62160 cluster00 -> 1ev0A0 5.9576887 58 / 96 conP: 0.243 CATH-ID: 3.30.1070.10 Mine. Chain: a, b. Fragment: mine topological specificity domain. Syno VNG62160 cluster01 -> 1k40A 6.4247919 126 / 96 conP: 0.183 CATH-TRUNC VNG62160 cluster02 -> 1h4uA 5.5922566 245 / 96 conP: 0.069 CATH-TRUNC VNG62160 cluster03 -> 1abv00 5.6652899 105 / 96 conP: 0.173 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi VNG62160 cluster04 -> 1qqnA4 5.4651407 84 / 96 conP: 0.187 CATH-ID: 3.90.640.10 D206s mutant of bovine 70 kilodalton heat shock protein. Chain: a. Fra VNG62160 cluster14 -> 1qd1B1 8.2251196 180 / 96 conP: 0.202 CATH-ID: 3.30.990.10 Formiminotransferase-cyclodeaminase. Chain: a, b. Fragment: formiminot --end-- VNG62181 one-of-top-five-correct: 0.29039248321979 CThresh: 3.889105 75 best_is: cluster17 VNG62181 cluster00 -> 1xer00 4.6203511 102 / 58 conP: 0.132 CATH-ID: 3.30.70.20 Ferredoxin. Chain: null VNG62181 cluster01 -> 1lo0H 4.7305715 218 / 58 conP: 0.037 CATH-TRUNC VNG62181 cluster02 -> 1aozA2 4.1745719 206 / 58 conP: 0.037 CATH-ID: 2.60.40.420 Ascorbate oxidase VNG62181 cluster03 -> 1bxrB2 5.7347991 229 / 58 conP: 0.043 CATH-ID: 3.40.50.880 Carbamoyl-phosphate synthase. Chain: a, b, c, d, e, f, g, h. Engineere VNG62181 cluster04 -> 1vom04 5.2890199 102 / 58 conP: 0.155 CATH-ID: 1.10.183.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y VNG62181 cluster17 -> 1qi7A1 7.2950264 178 / 58 conP: 0.116 CATH-ID: 3.40.420.10 N-glycosidase. Chain: a. Ec: 3.2.2.22 --end-- VNG62210 one-of-top-five-correct: 0.0225842604197391 CThresh: 5.655158 75 best_is: --end-- VNG62231 one-of-top-five-correct: 0.284090586460247 CThresh: 6.607829 75 best_is: cluster03 VNG62231 cluster00 -> 1aak00 6.8358925 150 / 85 conP: 0.157 CATH-ID: 3.10.110.10 Ubiquitin conjugating enzyme VNG62231 cluster01 -> 1mai00 5.8925125 119 / 85 conP: 0.155 CATH-ID: 2.30.29.30 PhospholipasE C delta-1. Chain: null. Fragment: pleckstrin homology do VNG62231 cluster02 -> 1pbwA0 5.0484285 184 / 85 conP: 0.077 CATH-ID: 1.10.555.10 Phosphatidylinositol 3-kinase. Chain: a, b. Fragment: p85 alpha subuni VNG62231 cluster03 -> 3ladA3 7.8289281 122 / 85 conP: 0.238 CATH-ID: 3.30.390.30 Dihydrolipoamide dehydrogenase VNG62231 cluster04 -> 1p32A0 6.6372854 182 / 85 conP: 0.119 CATH-ID: 3.10.280.10 Mitochondrial matrix protein, sf2p32. Chain: a, b, c. Mutation: l74m --end-- VNG6224h one-of-top-five-correct: 0.235220812506605 CThresh: 9.141427 25 best_is: cluster11 VNG6224h cluster00 -> 1qqeA0 6.1377510 281 / 127 conP: 0.077 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG6224h cluster01 -> 1hp800 5.1419246 68 / 127 conP: 0.168 CATH-ID: 1.10.810.10 Hu-p8. Chain: null. Engineered: synthetic gene. Mutation: n-terminal i VNG6224h cluster02 -> 1eemA2 3.8618981 115 / 127 conP: 0.097 CATH-ID: 1.20.1050.10 Glutathione-s-transferase. Chain: a. Engineered: yes VNG6224h cluster03 -> 1qgpA0 4.2768481 76 / 127 conP: 0.131 CATH-ID: 1.10.10.10 Double stranded RNA adenosine deaminase. Chain: a. Fragment: z-alpha d VNG6224h cluster04 -> 1abz00 5.3143675 38 / 127 conP: 0.201 CATH-ID: 1.20.860.10 Alpha-t-alpha. Chain: null. Synonym: ata. Engineered: yes. Other_detai VNG6224h cluster11 -> 5nseA 7.3240484 416 / 127 conP: 0.053 NO-CATH --end-- VNG6226h one-of-top-five-correct: 0.194737108231426 CThresh: 9.607685 25 best_is: cluster12 VNG6226h cluster00 -> 1fts01 4.8757405 84 / 131 conP: 0.139 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG6226h cluster01 -> 1bmtA1 6.7712505 87 / 131 conP: 0.215 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) VNG6226h cluster02 -> 1a81A2 5.6565275 45 / 131 conP: 0.199 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG6226h cluster03 -> 1gnwA2 4.4807075 125 / 131 conP: 0.103 CATH-ID: 1.20.1050.10 Glutathione s-transferase. Chain: a, b. Engineered: yes. Biological_un VNG6226h cluster04 -> 1dv0A0 5.4956606 45 / 131 conP: 0.192 CATH-ID: 1.10.8.10 DNA repair protein hhr23a. Chain: a. Fragment: uba domain (c-terminal VNG6226h cluster12 -> 1gdj00 6.7861569 153 / 131 conP: 0.162 CATH-ID: 1.10.490.10 Leghemoglobin (deoxy) --end-- VNG62390 one-of-top-five-correct: 0.231487446597491 CThresh: 5.816631 75 best_is: cluster00 VNG62390 cluster00 -> 1qqiA0 6.8748386 104 / 78 conP: 0.225 CATH-ID: 1.10.10.10 Phosphate regulon transcriptional regulatory protein phob. Chain: a. F VNG62390 cluster01 -> 1lccA0 4.4337301 51 / 78 conP: 0.187 CATH-ID: 1.10.260.10 Lac repressor ("headpiece") complex with an 11 base-pair half-operator VNG62390 cluster02 -> 1e6uA1 5.2725411 220 / 78 conP: 0.061 CATH-ID: 3.40.50.720 Gdp-fucose synthetase. Chain: a. Synonym: gdp-4-keto 6-deoxy-mannose 3 VNG62390 cluster03 -> 1cipA2 6.4589608 119 / 78 conP: 0.183 CATH-ID: 1.10.400.10 Guanine nucleotide-binding protein alpha-1 subunit. Chain: a. Synonym: VNG62390 cluster04 -> 1f08A0 5.6517320 148 / 78 conP: 0.121 CATH-ID: 3.30.70.750 Replication protein e1. Chain: a, b. Fragment: DNA-binding domain. Eng --end-- VNG62391 one-of-top-five-correct: 0.414216586170356 CThresh: 6.506471 75 best_is: cluster08 VNG62391 cluster00 -> 1d5aA5 7.7330147 54 / 113 conP: 0.423 CATH-ID: 1.20.15.250 DNA polymerase. Chain: a. Engineered: yes VNG62391 cluster01 -> 1e7aA2 7.3765452 90 / 113 conP: 0.346 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG62391 cluster02 -> 1c17M0 8.6244648 142 / 113 conP: 0.355 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG62391 cluster03 -> 2ezh00 7.6402833 65 / 113 conP: 0.400 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: igamma subdomain, residues 174 - 2 VNG62391 cluster04 -> 1b25A3 6.9855338 213 / 113 conP: 0.181 CATH-ID: 1.10.599.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG62391 cluster08 -> 1by1A0 8.7268777 209 / 113 conP: 0.272 CATH-ID: 1.20.900.10 Pix. Chain: a. Fragment: dbl homology domain. Engineered: yes. Biologi --end-- VNG6251h one-of-top-five-correct: 0.426904473224055 CThresh: 6.981727 70 best_is: cluster17 VNG6251h cluster00 -> 1jud02 6.4524429 75 / 103 conP: 0.263 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG6251h cluster01 -> 1gsoA2 6.1465287 64 / 103 conP: 0.261 CATH-ID: 2.30.35.30 Glycinamide ribonucleotide synthetase. Chain: a. Synonym: purd gen pro VNG6251h cluster02 -> 2ezh00 8.0570619 65 / 103 conP: 0.378 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: igamma subdomain, residues 174 - 2 VNG6251h cluster03 -> 1djxB1 6.4665934 52 / 103 conP: 0.295 CATH-ID: 1.10.238.10 Phosphoinositide-specific phospholipasE C, isozyme delta1. Chain: a, b VNG6251h cluster04 -> 1k4vA 7.2520328 287 / 103 conP: 0.096 NO-CATH VNG6251h cluster17 -> 1colA0 9.3126573 197 / 103 conP: 0.262 CATH-ID: 1.10.490.30 Colicin A (c-terminal domain) (pore-forming domain) --end-- VNG6254c one-of-top-five-correct: 0.652803037189194 CThresh: 3.975127 75 best_is: cluster08 VNG6254c cluster00 -> 1b87A0 6.4643168 181 / 100 conP: 0.245 CATH-ID: 3.40.630.30 Aminoglycoside n6'-acetyltransferase type 1. Chain: a. Synonym: aac. M VNG6254c cluster01 -> 1ghsA0 7.7166996 306 / 100 conP: 0.163 CATH-ID: 3.20.20.80 1,3-beta-glucanase (1,3-beta-d-glucan endohydrolase, isozyme ii) VNG6254c cluster02 -> 2dnjA0 6.4900377 253 / 100 conP: 0.165 CATH-ID: 3.60.10.10 Deoxyribonuclease i (dnase i) complexed with DNA (5'-d( Gp Cp Gp Ap Tp VNG6254c cluster03 -> 1ekrA0 6.2043886 143 / 100 conP: 0.282 CATH-ID: 3.30.70.640 Molybdenum cofactor biosynthesis protein c. Chain: a. Engineered: yes. VNG6254c cluster04 -> 1bwzA2 6.7266182 137 / 100 conP: 0.323 CATH-ID: 3.10.310.10 Diaminopimelate epimerase. Chain: a. Synonym: dap epimerase. Engineere VNG6254c cluster08 -> 1f3vA0 10.552085 158 / 100 conP: 0.554 CATH-ID: 3.30.70.680 Tumor necrosis factor receptor type 1 associated death domain protein. --end-- VNG6255c one-of-top-five-correct: 0.332295302787524 CThresh: 4.847723 75 best_is: cluster18 VNG6255c cluster00 -> 1hssA0 5.3796540 111 / 88 conP: 0.209 CATH-ID: 1.10.120.10 0.19 alpha-amylase inhibitor. Chain: a, b, c, d. Biological_unit: dime VNG6255c cluster01 -> 1yagA3 6.8474450 108 / 88 conP: 0.292 CATH-ID: 3.30.420.70 Actin. Chain: a. Gelsolin. Chain: g. Fragment: subdomain 1. Synonym: a VNG6255c cluster02 -> 1hssA0 7.4201760 111 / 88 conP: 0.322 CATH-ID: 1.10.120.10 0.19 alpha-amylase inhibitor. Chain: a, b, c, d. Biological_unit: dime VNG6255c cluster03 -> 1fts01 6.9410671 84 / 88 conP: 0.339 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG6255c cluster04 -> 1fts01 6.9410671 84 / 88 conP: 0.339 CATH-ID: 1.20.120.140 Ftsy. Chain: null. Fragment: ng-domain residues 197 - 497. Engineered: VNG6255c cluster18 -> 1chkA2 7.5822799 95 / 88 conP: 0.361 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes --end-- VNG6269c one-of-top-five-correct: 0.410190292861094 CThresh: 6.953304 44 best_is: cluster10 VNG6269c cluster00 -> 1sqc01 6.0525182 347 / 114 conP: 0.064 CATH-ID: 1.50.10.20 Squalene-hopene cyclase. Chain: null. Engineered: yes. Biological_unit VNG6269c cluster01 -> 1a6q02 7.4845932 69 / 114 conP: 0.362 CATH-ID: 1.10.920.10 Phosphatase 2c. Chain: null. Engineered: yes VNG6269c cluster02 -> 1mbe00 6.6968813 52 / 114 conP: 0.335 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG6269c cluster03 -> 1f16A0 5.8709046 192 / 114 conP: 0.144 CATH-ID: 1.10.437.10 Apoptosis regulator bax, membrane isoform alpha. Chain: a. Engineered: VNG6269c cluster04 -> 1e5rA 5.6892909 260 / 114 conP: 0.095 NO-CATH VNG6269c cluster10 -> 1ocrE0 8.8612589 109 / 114 conP: 0.398 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG62721 one-of-top-five-correct: 0.409081133272396 CThresh: 5.663412 75 best_is: cluster06 VNG62721 cluster00 -> 1necA0 5.7141871 216 / 91 conP: 0.102 CATH-ID: 3.40.109.10 Nitroreductase. Chain: a, b, c, d. Engineered: yes VNG62721 cluster01 -> 1bu2A1 6.6888994 112 / 91 conP: 0.250 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes VNG62721 cluster02 -> 1bip00 6.2585153 122 / 91 conP: 0.214 CATH-ID: 1.10.120.10 Bifunctional trypsin/alpha-amylase inhibitor (rbi) (nmr, 20 structures VNG62721 cluster03 -> 1ehkA0 6.1780598 544 / 91 conP: 0.010 CATH-ID: 1.20.210.20 Ba3-type cytochromE-C oxidase. Chain: a. Fragment: subunit i. Ba3-type VNG62721 cluster04 -> 1cgo00 7.4404439 125 / 91 conP: 0.273 CATH-ID: 1.20.120.10 Cytochrome c' VNG62721 cluster06 -> 2cblA1 8.7874429 129 / 91 conP: 0.349 CATH-ID: 1.20.930.20 Proto-oncogene cbl. Chain: a. Fragment: domain. Engineered: yes. Zap-7 --end-- VNG6275h one-of-top-five-correct: 0.305854822342639 CThresh: 8.590497 25 best_is: cluster03 VNG6275h cluster00 -> 1ixmA1 5.6930852 59 / 132 conP: 0.228 CATH-ID: 1.20.15.100 Sporulation response regulatory protein. Chain: a, b. Synonym: spo0b. VNG6275h cluster01 -> 1fjgB2 5.7916687 62 / 132 conP: 0.230 CATH-TRUNC VNG6275h cluster02 -> 1dkgA1 4.6720213 98 / 132 conP: 0.152 CATH-ID: 3.90.20.20 Nucleotide exchange factor grpe. Chain: a, b. Engineered: yes. Mutatio VNG6275h cluster03 -> 1jqcA0 7.9444751 340 / 132 conP: 0.113 CATH-ID: 1.10.620.20 Protein r2 of ribonucleotide reductase. Chain: a, b. Synonym: ribonucl VNG6275h cluster04 -> 1rmi_ 5.7035670 160 / 132 conP: 0.148 NO-CATH --end-- VNG6276h one-of-top-five-correct: 0.334932900909555 CThresh: 2.466936 100 best_is: cluster14 VNG6276h cluster00 -> 1jquA 6.8740461 164 / 53 conP: 0.132 NO-CATH VNG6276h cluster01 -> 119l00 6.7229516 162 / 53 conP: 0.130 CATH-ID: 1.10.530.40 Lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, a VNG6276h cluster02 -> 1etpA1 6.1870985 91 / 53 conP: 0.246 CATH-ID: 1.10.1250.10 Cytochrome c4. Chain: a, b VNG6276h cluster03 -> 1ax800 5.7291335 130 / 53 conP: 0.146 CATH-ID: 1.20.120.200 Obesity protein. Chain: null. Synonym: leptin. Engineered: yes. Mutati VNG6276h cluster04 -> 119l00 6.0451230 162 / 53 conP: 0.109 CATH-ID: 1.10.530.40 Lysozyme mutant with cys 54 replaced by thr, cys 97 replaced by ala, a VNG6276h cluster14 -> 1akhB0 7.3320112 78 / 53 conP: 0.350 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Engineered: yes. Mating-type protei --end-- VNG62790 one-of-top-five-correct: 0.486429346355051 CThresh: 7.472423 25 best_is: cluster06 VNG62790 cluster00 -> 1bknB1 5.8244850 169 / 122 conP: 0.161 CATH-ID: 3.30.565.10 Mutl. Chain: a, b. Fragment: n-terminal 40kd fragment. Engineered: yes VNG62790 cluster01 -> 1qnf02 6.5785565 123 / 122 conP: 0.237 CATH-ID: 1.25.40.80 Photolyase. Chain: null. Synonym: DNA cyclobutane dipyrimidine photoly VNG62790 cluster02 -> 1bvyF0 5.7003612 152 / 122 conP: 0.169 CATH-ID: 3.40.50.360 Cytochrome p450 bm-3. Chain: a, b. Fragment: heme-binding domain. Engi VNG62790 cluster03 -> 1qleB2 7.0739517 81 / 122 conP: 0.313 CATH-ID: 1.20.15.60 CytochromE C oxidase polypeptide i-beta. Chain: a. Synonym: cytochrome VNG62790 cluster04 -> 1ytfD1 5.5001509 53 / 122 conP: 0.253 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami VNG62790 cluster06 -> 2ifeA0 9.7601074 91 / 122 conP: 0.482 CATH-ID: 3.30.110.10 Translation initiation factor if3. Chain: a. Fragment: ribosome-bindin --end-- VNG62791 one-of-top-five-correct: 0.47208839289753 CThresh: 3.434684 75 best_is: cluster05 VNG62791 cluster00 -> 2chsA0 4.9224159 114 / 75 conP: 0.196 CATH-ID: 3.30.70.130 Chorismate mutase VNG62791 cluster01 -> 1qrjB1 5.7475580 114 / 75 conP: 0.236 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG62791 cluster02 -> 1qrjB1 6.3664145 114 / 75 conP: 0.269 CATH-ID: 1.10.375.10 His tag. Chain: a. Engineered: yes. Htlv-i capsid protein. Chain: b. E VNG62791 cluster03 -> 1ejdA1 6.1601290 207 / 75 conP: 0.127 CATH-ID: 3.65.10.10 Udp-n-acetylglucosamine enolpyruvyltransferase. Chain: a, b. Synonym: VNG62791 cluster04 -> 1anv01 5.3349869 115 / 75 conP: 0.213 CATH-ID: 1.10.269.10 Adenovirus single-stranded DNA-binding protein. Chain: null. Fragment: VNG62791 cluster05 -> 1ddt02 8.8418408 180 / 75 conP: 0.289 CATH-ID: 1.10.490.40 Diphtheria toxin (dimeric) --end-- VNG62800 one-of-top-five-correct: 0.74669349680024 CThresh: 7.541084 25 best_is: cluster00 VNG62800 cluster00 -> 1ivhA3 12.899338 141 / 122 conP: 0.630 CATH-ID: 1.20.140.10 Isovaleryl-coa dehydrogenase. Chain: a, b, c, d. Engineered: yes. Biol VNG62800 cluster01 -> 1ik3A 7.2183874 836 / 122 conP: 0.006 CATH-TRUNC VNG62800 cluster02 -> 1phb00 8.0159962 405 / 122 conP: 0.084 CATH-ID: 1.10.630.10 Cytochrome p450-cam (camphor 5-monoxygenase) complex with camphor (min VNG62800 cluster03 -> 1joyA0 6.5540825 67 / 122 conP: 0.295 CATH-ID: 1.20.15.210 Envz_ecoli. Chain: a, b. Fragment: residues 223-289. Engineered: yes VNG62800 cluster04 -> 1aorA3 6.8225517 207 / 122 conP: 0.168 CATH-ID: 1.10.599.10 Aldehyde ferredoxin oxidoreductase protein complexed with molybdopteri --end-- VNG62801 one-of-top-five-correct: 0.649460446379154 CThresh: 1.891799 100 best_is: cluster16 VNG62801 cluster00 -> 1nal10 9.9738140 291 / 73 conP: 0.206 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 VNG62801 cluster01 -> 1ak500 7.8940306 329 / 73 conP: 0.090 CATH-ID: 3.20.20.90 Inosine-5'-monophosphate dehydrogenase. Chain: null. Synonym: impdh. E VNG62801 cluster02 -> 1ak500 7.4780739 329 / 73 conP: 0.081 CATH-ID: 3.20.20.90 Inosine-5'-monophosphate dehydrogenase. Chain: null. Synonym: impdh. E VNG62801 cluster03 -> 1rpxA0 7.4780739 230 / 73 conP: 0.185 CATH-ID: 3.20.20.90 Ribulose-phosphate 3-epimerase. Chain: a, b, c, b, c. Engineered: yes. VNG62801 cluster04 -> 1nal10 8.3099873 291 / 73 conP: 0.138 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 VNG62801 cluster16 -> 1nal10 10.181792 291 / 73 conP: 0.216 CATH-ID: 3.20.20.70 N-acetylneuraminate lyase. Chain: 1, 2, 3, 4. Ec: 4.1.3.3 --end-- VNG6286h one-of-top-five-correct: 0.347733378249389 CThresh: 5.487847 75 best_is: cluster00 VNG6286h cluster00 -> 1l0pA 8.4935772 448 / 69 conP: 0.012 NO-CATH VNG6286h cluster01 -> 1fq1A0 7.1066059 183 / 69 conP: 0.111 CATH-ID: 3.90.190.10 Cyclin-dependent kinase inhibitor 3. Chain: a. Engineered: yes. Mutati VNG6286h cluster02 -> 1gym00 7.2242911 296 / 69 conP: 0.039 CATH-ID: 3.20.20.190 Phosphatidylinositol-specific phospholipasE C. Chain: null. Engineered VNG6286h cluster03 -> 1f1sA 6.1593146 814 / 69 conP: 0.000 NO-CATH VNG6286h cluster04 -> 1br6A1 6.1415022 179 / 69 conP: 0.089 CATH-ID: 3.40.420.10 Ricin. Chain: a. Synonym: rta. Engineered: yes --end-- VNG6287h one-of-top-five-correct: 0.51377580436078 CThresh: 2.988554 100 best_is: cluster14 VNG6287h cluster00 -> 1ad600 8.1020089 185 / 73 conP: 0.246 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG6287h cluster01 -> 1ad600 8.5179656 185 / 73 conP: 0.269 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG6287h cluster02 -> 1ad600 7.2700956 185 / 73 conP: 0.204 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG6287h cluster03 -> 1ad600 8.9339223 185 / 73 conP: 0.293 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG6287h cluster04 -> 1f1zA2 7.6860523 99 / 73 conP: 0.398 CATH-ID: 1.10.10.10 Tnsa endonuclease. Chain: a, b. Synonym: transposase VNG6287h cluster14 -> 1ad600 9.1419007 185 / 73 conP: 0.306 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi --end-- VNG6288c one-of-top-five-correct: 0.431503055641615 CThresh: 4.678851 75 best_is: cluster08 VNG6288c cluster00 -> 1gdoA0 5.7461958 238 / 91 conP: 0.108 CATH-ID: 3.60.20.10 Glucosamine 6-phosphate synthase. Chain: a, b, c, d. Fragment: glutami VNG6288c cluster01 -> 1b0pA2 5.7919742 157 / 91 conP: 0.185 CATH-ID: 3.40.50.920 Pyruvate-ferredoxin oxidoreductase. Chain: a, b. Biological_unit: homo VNG6288c cluster02 -> 1mylA0 4.6949234 45 / 91 conP: 0.282 CATH-ID: 1.10.1220.10 Arc repressor mutant with arg 31 replaced by met, glu 36 replaced by t VNG6288c cluster03 -> 1ocrE0 5.3691143 109 / 91 conP: 0.226 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG6288c cluster04 -> 1mylA0 5.4161265 45 / 91 conP: 0.326 CATH-ID: 1.10.1220.10 Arc repressor mutant with arg 31 replaced by met, glu 36 replaced by t VNG6288c cluster08 -> 1i5nA0 8.5929100 124 / 91 conP: 0.397 CATH-ID: 1.20.120.160 Chemotaxis protein chea. Chain: a, b, c, d. Fragment: residues 1-138. --end-- VNG6291h one-of-top-five-correct: 0.262023751253922 CThresh: 5.465870 75 best_is: cluster00 VNG6291h cluster00 -> 3ygsP0 7.1431995 97 / 79 conP: 0.269 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: c. Fragment: caspase re VNG6291h cluster01 -> 1a1w00 5.4629362 83 / 79 conP: 0.204 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG6291h cluster02 -> 1bvp11 5.2147154 120 / 79 conP: 0.147 CATH-ID: 1.10.250.10 Bluetongue virus 10 (usa) vp7 (btv-10 (usa) vp7) VNG6291h cluster03 -> 1d1dA1 5.6208474 140 / 79 conP: 0.139 CATH-ID: 1.10.375.10 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG6291h cluster04 -> 1e8xA3 6.6028019 185 / 79 conP: 0.126 CATH-ID: 1.25.40.110 Phosphatidylinositol 3-kinase catalytic subunit. Chain: a. Fragment: p --end-- VNG62930 one-of-top-five-correct: 0.243312245155627 CThresh: 8.038360 25 best_is: cluster11 VNG62930 cluster00 -> 1gpmA3 6.6443672 108 / 126 conP: 0.241 CATH-ID: 3.30.300.10 Gmp synthetase. Chain: a, b, c, d. Synonym: xmp aminase. Engineered: y VNG62930 cluster01 -> 1cunA1 5.7257703 102 / 126 conP: 0.201 CATH-ID: 1.20.1040.10 Alpha spectrin. Chain: a, b, c. Fragment: repeats 16 and 17 (residues VNG62930 cluster02 -> 1ala01 6.6461605 73 / 126 conP: 0.278 CATH-ID: 1.10.220.10 Annexin v VNG62930 cluster03 -> 1aipC3 5.7291335 53 / 126 conP: 0.249 CATH-ID: 1.10.8.30 Elongation factor tu. Chain: a, b, e, f. Synonym: ef-tu. Engineered: y VNG62930 cluster04 -> 1pbe01 6.5544302 231 / 126 conP: 0.135 CATH-ID: 3.50.50.60 P-hydroxybenzoate hydroxylase (phbh) complexed with p-hydroxybenzoic a VNG62930 cluster11 -> 2tct01 6.9682711 65 / 126 conP: 0.307 CATH-ID: 1.10.10.60 Tetracycline repressor. Chain: null. Synonym: tet repressor, class d. --end-- VNG62931 one-of-top-five-correct: 0.550428684401005 CThresh: 7.174904 25 best_is: cluster10 VNG62931 cluster00 -> 1qspA0 6.7337142 165 / 128 conP: 0.229 CATH-ID: 1.20.120.160 Ypd1. Chain: a, b. Engineered: yes. Biological_unit: monomer VNG62931 cluster01 -> 2hmqA0 7.5232444 113 / 128 conP: 0.331 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG62931 cluster02 -> 1jp6A 6.6388650 152 / 128 conP: 0.237 NO-CATH VNG62931 cluster03 -> 2arcA0 5.7624244 161 / 128 conP: 0.186 CATH-ID: 2.60.120.280 Arabinose operon regulatory protein. Chain: a, b. Fragment: sugar-bind VNG62931 cluster04 -> 2hmqA0 7.7758872 113 / 128 conP: 0.348 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG62931 cluster10 -> 2asr00 10.191286 142 / 128 conP: 0.477 CATH-ID: 1.20.120.30 Aspartate receptor (ligand binding domain) --end-- VNG62970 one-of-top-five-correct: 0.227135649279955 CThresh: 6.997539 52 best_is: cluster10 VNG62970 cluster00 -> 1pklA1 5.8722883 155 / 103 conP: 0.149 CATH-ID: 3.40.50.50 Pyruvate kinase. Chain: a, b, c, d, e, f, h, g. Engineered: yes VNG62970 cluster01 -> 1d2tA 5.3787379 222 / 103 conP: 0.088 NO-CATH VNG62970 cluster02 -> 153l00 4.7559066 185 / 103 conP: 0.094 CATH-ID: 1.10.530.10 Lysozyme VNG62970 cluster03 -> 1gxpA 4.3898101 103 / 103 conP: 0.140 NO-CATH VNG62970 cluster04 -> 1r6900 4.6651824 63 / 103 conP: 0.187 CATH-ID: 1.10.260.10 434 repressor (amino-terminal domain) (r1-69) VNG62970 cluster10 -> 1jud02 6.7737206 75 / 103 conP: 0.281 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes --end-- VNG63020 one-of-top-five-correct: 0.676574695396026 CThresh: 7.074610 25 best_is: cluster07 VNG63020 cluster00 -> 1a36A5 7.7281079 72 / 161 conP: 0.477 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain VNG63020 cluster01 -> 1f5xA0 8.9991594 208 / 161 conP: 0.422 CATH-ID: 1.20.900.10 Rho-gef vav. Chain: a. Fragment: dbl homology domain. Engineered: yes VNG63020 cluster02 -> 1cii01 10.321891 344 / 161 conP: 0.371 CATH-ID: 1.20.250.10 Colicin ia. Chain: null. Engineered: yes. Biological_unit: monomer VNG63020 cluster03 -> 1fftC0 7.5685269 185 / 161 conP: 0.348 CATH-ID: 1.20.120.80 Ubiquinol oxidase. Chain: a, f. Engineered: yes. Ubiquinol oxidase. Ch VNG63020 cluster04 -> 1a7vA0 10.250194 125 / 161 conP: 0.600 CATH-ID: 1.20.120.10 Cytochrome c'. Chain: a, b VNG63020 cluster07 -> 1a36A5 10.860813 72 / 161 conP: 0.692 CATH-ID: 1.20.15.30 Topoisomerase i. Chain: a. Fragment: core domain and c-terminal domain --end-- VNG63130 one-of-top-five-correct: 0.564328851998932 CThresh: 6.988306 46 best_is: cluster06 VNG63130 cluster00 -> 1g6wB 7.4638322 242 / 138 conP: 0.228 CATH-TRUNC VNG63130 cluster01 -> 1bucA3 8.6344991 141 / 138 conP: 0.409 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG63130 cluster02 -> 2gsq02 6.9301128 108 / 138 conP: 0.333 CATH-ID: 1.20.1050.10 Glutathione s-transferase. Chain: null. Synonym: squid gst. Engineered VNG63130 cluster03 -> 1a9100 8.4637708 79 / 138 conP: 0.474 CATH-ID: 1.20.20.10 F1fo atpase subunit c. Chain: null. Synonym: proteolipid, dccd-binding VNG63130 cluster04 -> 1lbkA 6.8899442 208 / 138 conP: 0.229 CATH-TRUNC VNG63130 cluster06 -> 1fgjA2 10.033210 230 / 138 conP: 0.397 CATH-ID: 1.20.850.10 Hydroxylamine oxidoreductase. Chain: a, b. Ec: 1.7.3.4 --end-- VNG63200 one-of-top-five-correct: 0.250480651672447 CThresh: 6.972347 32 best_is: cluster04 VNG63200 cluster00 -> 1mpyA1 5.2158778 149 / 99 conP: 0.124 CATH-ID: 3.10.180.10 Catechol 2,3-dioxygenase. Chain: a, b, c, d. Synonym: metapyrocatechas VNG63200 cluster01 -> 1dh0A1 6.9890646 270 / 99 conP: 0.091 CATH-ID: 3.90.77.20 Adenosine kinase. Chain: a. Engineered: yes VNG63200 cluster02 -> 191400 5.2826135 171 / 99 conP: 0.110 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG63200 cluster03 -> 1drgA 5.8514305 313 / 99 conP: 0.051 NO-CATH VNG63200 cluster04 -> 3tgl00 7.2051696 265 / 99 conP: 0.100 CATH-ID: 3.40.50.950 Triacylglycerol acylhydrolase --end-- VNG6321h one-of-top-five-correct: 0.232175981602475 CThresh: 7.063070 25 best_is: cluster17 VNG6321h cluster00 -> 1ocrE0 6.3460070 109 / 100 conP: 0.205 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG6321h cluster01 -> 1myo00 6.0511325 118 / 100 conP: 0.182 CATH-ID: 1.25.40.20 Myotrophin. Chain: null VNG6321h cluster02 -> 1sfe01 5.3902045 81 / 100 conP: 0.193 CATH-ID: 3.30.160.70 Ada o6-methylguanine-DNA methyltransferase. Chain: null. Fragment: c-t VNG6321h cluster03 -> 1trlA0 6.1590084 62 / 100 conP: 0.254 CATH-ID: 1.10.390.10 Thermolysin fragment 255 - 316 (nmr, 8 structures) VNG6321h cluster04 -> 2bct00 5.8264425 502 / 100 conP: 0.014 CATH-ID: 1.25.30.10 Beta-catenin. Chain: null. Fragment: armadillo repeat region. Engineer VNG6321h cluster17 -> 1bmtA2 6.9497472 158 / 100 conP: 0.179 CATH-ID: 3.40.50.280 Methionine synthase (b12-binding domains) --end-- VNG6322h one-of-top-five-correct: 0.611166073551566 CThresh: 3.669203 75 best_is: cluster12 VNG6322h cluster00 -> 2ezl00 7.4928412 99 / 75 conP: 0.357 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: ibeta subdomain, residues 77 - 174 VNG6322h cluster01 -> 1dceA1 6.3688561 317 / 75 conP: 0.050 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG6322h cluster02 -> 1abv00 5.5591271 105 / 75 conP: 0.231 CATH-ID: 1.10.520.20 Delta subunit of the f1f0-atp synthase. Chain: null. Fragment: n-termi VNG6322h cluster03 -> 1enh00 7.1915739 54 / 75 conP: 0.437 CATH-ID: 1.10.10.60 Engrailed homeodomain VNG6322h cluster04 -> 1aa7A1 7.1227482 79 / 75 conP: 0.376 CATH-ID: 1.20.91.10 Influenza virus matrix protein. Chain: a, b. Biological_unit: dimer VNG6322h cluster12 -> 1ddbA0 10.492125 195 / 75 conP: 0.350 CATH-ID: 1.10.437.10 Bid. Chain: a. Engineered: yes. Biological_unit: monomer --end-- VNG6325h one-of-top-five-correct: 0.295217251956016 CThresh: 6.209993 75 best_is: cluster12 VNG6325h cluster00 -> 1yrnA0 7.3290605 49 / 87 conP: 0.355 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG6325h cluster01 -> 1ad600 6.7712505 185 / 87 conP: 0.136 CATH-ID: 1.10.472.10 Retinoblastoma tumor suppressor. Chain: null. Fragment: domain a. Engi VNG6325h cluster02 -> 1be3A2 4.7991579 204 / 87 conP: 0.071 CATH-ID: 3.30.830.10 Cytochrome bc1 complex. Chain: a, b, c, d, e, f, g, h, i, j, k. Synony VNG6325h cluster03 -> 1qsaA1 6.6971302 363 / 87 conP: 0.035 CATH-ID: 1.25.20.10 Soluble lytic transglycosylase slt70. Chain: a. Fragment: full protein VNG6325h cluster04 -> 1dceA1 5.7046244 317 / 87 conP: 0.038 CATH-ID: 1.25.40.120 Rab geranylgeranyltransferase alpha subunit. Chain: a, c. Rab geranylg VNG6325h cluster12 -> 1ocrE0 7.7510185 109 / 87 conP: 0.277 CATH-ID: 1.25.40.40 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG6330h one-of-top-five-correct: 0.597460874483165 CThresh: 4.080438 75 best_is: cluster00 VNG6330h cluster00 -> 1qdbA 10.544478 473 / 74 conP: 0.034 NO-CATH VNG6330h cluster01 -> 1gln05 7.8518573 98 / 74 conP: 0.358 CATH-ID: 1.10.10.350 Glutamyl-tRNA synthetase. Chain: null VNG6330h cluster02 -> 1dkxA2 7.1049187 80 / 74 conP: 0.347 CATH-ID: 1.20.120.110 Substrate binding domain of dnak. Chain: a. Biological_unit: dimer. Su VNG6330h cluster03 -> 1elkA0 7.2304833 153 / 74 conP: 0.217 CATH-ID: 1.25.40.90 Target of myb1. Chain: a, b. Fragment: vhs domain. Engineered: yes. Mu VNG6330h cluster04 -> 1elrA0 8.7624807 128 / 74 conP: 0.353 CATH-ID: 1.25.40.10 Tpr2a-domain of hop. Chain: a. Fragment: middle domain. Engineered: ye --end-- VNG63312 one-of-top-five-correct: 0.0380056868493715 CThresh: 2.417327 100 best_is: --end-- VNG6332h one-of-top-five-correct: 0.144030078991792 CThresh: 1.948356 100 best_is: cluster14 VNG6332h cluster00 -> 1ctf00 4.5284006 68 / 34 conP: 0.141 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG6332h cluster01 -> 1ctf00 4.5284006 68 / 34 conP: 0.141 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG6332h cluster02 -> 1b22A0 4.0063446 70 / 34 conP: 0.119 CATH-ID: 1.10.150.70 DNA repair protein rad51. Chain: a. Fragment: n-terminal domain. Engin VNG6332h cluster03 -> 1ctf00 4.5284006 68 / 34 conP: 0.141 CATH-ID: 3.30.70.70 L7(slash) L12 50 s ribosomal protein (c-terminal domain) VNG6332h cluster04 -> 7ceiB0 4.5284006 127 / 34 conP: 0.046 CATH-ID: 3.90.540.10 Colicin e7 immunity protein. Chain: a. Synonym: im7. Engineered: yes. VNG6332h cluster14 -> 1cjaA1 4.5284006 150 / 34 conP: 0.029 CATH-ID: 3.30.1010.10 Actin-fragmin kinase. Chain: a, b. Fragment: catalytic domain. Enginee --end-- VNG6335h one-of-top-five-correct: 0.292773118098001 CThresh: 9.013696 25 best_is: cluster13 VNG6335h cluster00 -> 1ijwC 6.2644251 47 / 127 conP: 0.244 NO-CATH VNG6335h cluster01 -> 1aisB1 5.6384330 99 / 127 conP: 0.168 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG6335h cluster02 -> 1adeA2 5.9863590 100 / 127 conP: 0.182 CATH-ID: 1.10.300.10 Adenylosuccinate synthetase. Chain: a, b. Domain: c-terminal. Ec: 6.3. VNG6335h cluster03 -> 1soxB1 6.3809882 84 / 127 conP: 0.214 CATH-ID: 3.10.120.10 Sulfite oxidase. Chain: a, b. Biological_unit: dimer VNG6335h cluster04 -> 1mpgA3 5.7757296 52 / 127 conP: 0.215 CATH-ID: 1.10.15.10 3-methyladenine DNA glycosylase ii. Chain: a, b. Synonym: alka. Engine VNG6335h cluster13 -> 1dik05 8.0794750 89 / 127 conP: 0.302 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y --end-- VNG6339h one-of-top-five-correct: 0.208110817638122 CThresh: 5.473074 75 best_is: cluster00 VNG6339h cluster00 -> 1b37A2 6.7554423 218 / 60 conP: 0.051 CATH-ID: 3.90.660.10 Polyamine oxidase. Chain: a, b, c. Fragment: fad-binding domain. Ec: 1 VNG6339h cluster01 -> 1lbkA 6.5348076 208 / 60 conP: 0.053 NO-CATH VNG6339h cluster02 -> 1qo7A0 5.3855873 385 / 60 conP: 0.005 CATH-ID: 3.40.50.950 Epoxide hydrolase. Chain: a, b. Fragment: residues 3-396. Synonym: eh. VNG6339h cluster03 -> 1e7aA2 5.1371473 90 / 60 conP: 0.130 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6339h cluster04 -> 1hqvA0 6.0935382 178 / 60 conP: 0.066 CATH-ID: 1.10.238.10 Programmed cell death protein 6. Chain: a. Synonym: probable calcium-b --end-- VNG6340h one-of-top-five-correct: 0.353404414052122 CThresh: 7.058871 25 best_is: cluster19 VNG6340h cluster00 -> 1bm9A0 7.3933143 120 / 92 conP: 0.222 CATH-ID: 1.10.10.10 Replication terminator protein. Chain: a, b. Synonym: rtp, ter. Engine VNG6340h cluster01 -> 1d3yA1 7.5611934 71 / 92 conP: 0.303 CATH-ID: 1.10.10.10 DNA topoisomerase vi a subunit. Chain: a, b. Fragment: DNA binding cor VNG6340h cluster02 -> 1gtxA1 5.5043821 167 / 92 conP: 0.104 CATH-ID: 3.30.70.160 4-aminobutyrate aminotransferase. Chain: a, b, c, d. Synonym: gaba-at. VNG6340h cluster03 -> 1a8h02 5.1618908 288 / 92 conP: 0.040 CATH-ID: 3.40.510.10 Methionyl-tRNA synthetase. Chain: null. Synonym: metrs. Biological_uni VNG6340h cluster04 -> 1i36A 6.2619914 258 / 92 conP: 0.067 NO-CATH VNG6340h cluster19 -> 1qtwA0 8.7505248 285 / 92 conP: 0.107 CATH-ID: 3.20.20.150 Endonuclease iv. Chain: a. Engineered: yes --end-- VNG6344h one-of-top-five-correct: 0.16012560351097 CThresh: 1.684793 100 best_is: cluster07 VNG6344h cluster00 -> 1bpoA2 4.4692423 155 / 35 conP: 0.031 CATH-ID: 1.25.40.30 Clathrin. Chain: a, b, c. Fragment: terminal domain and linker. Engine VNG6344h cluster01 -> 1cp9B 4.7280758 553 / 35 conP: 0.000 NO-CATH VNG6344h cluster02 -> 1a9xA4 4.7280758 150 / 35 conP: 0.036 CATH-ID: 1.10.1030.10 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG6344h cluster03 -> 1a9xA4 4.2104088 150 / 35 conP: 0.031 CATH-ID: 1.10.1030.10 Carbamoyl phosphate synthetase. Chain: a, b, c, d, e, f, g, h. Enginee VNG6344h cluster04 -> 1bk7A0 4.2104088 190 / 35 conP: 0.014 CATH-ID: 3.90.730.10 Ribonuclease mc1. Chain: a. Synonym: rnase mc1. Ec: 3.1.27.1 VNG6344h cluster07 -> 153l00 4.7280758 185 / 35 conP: 0.018 CATH-ID: 1.10.530.10 Lysozyme --end-- VNG63490 one-of-top-five-correct: 0.302221486726982 CThresh: 7.042480 25 best_is: cluster05 VNG63490 cluster00 -> 1mla02 5.3466029 232 / 113 conP: 0.098 CATH-ID: 3.40.366.10 Malonyl-coenzyme a acyl carrier protein transacylase. Chain: null. Syn VNG63490 cluster01 -> 2mobA0 5.7068445 94 / 113 conP: 0.220 CATH-ID: 3.90.56.10 Methane monooxygenase regulatory protein b. Chain: a. Synonym: methane VNG63490 cluster02 -> 1fx4A0 6.1931169 231 / 113 conP: 0.122 CATH-ID: 3.50.6.10 Receptor-type adenylate cyclase gresag 4.3. Chain: a. Fragment: cataly VNG63490 cluster03 -> 1afi00 5.2219440 72 / 113 conP: 0.220 CATH-ID: 3.30.70.100 Merp. Chain: null. Synonym: mercuric transport protein. Engineered: me VNG63490 cluster04 -> 1lehA2 6.1774668 203 / 113 conP: 0.142 CATH-ID: 3.40.50.720 Leucine dehydrogenase. Chain: a, b. Biological_unit: octamer VNG63490 cluster05 -> 1fjgO0 7.6280641 88 / 113 conP: 0.338 CATH-TRUNC --end-- VNG63492 one-of-top-five-correct: 0.622125826956976 CThresh: 3.389328 75 best_is: cluster13 VNG63492 cluster00 -> 1ibrB0 8.5146562 458 / 75 conP: 0.027 CATH-ID: 1.25.30.20 Ran. Chain: a, c. Engineered: yes. Importin beta subunit. Chain: b, d. VNG63492 cluster01 -> 1beo00 6.7737206 98 / 75 conP: 0.327 CATH-ID: 1.10.239.10 Beta-cryptogein. Chain: null. Synonym: beta-elicitin of phytophthora c VNG63492 cluster02 -> 1beo00 6.3688561 98 / 75 conP: 0.302 CATH-ID: 1.10.239.10 Beta-cryptogein. Chain: null. Synonym: beta-elicitin of phytophthora c VNG63492 cluster03 -> 1beo00 6.6671652 98 / 75 conP: 0.320 CATH-ID: 1.10.239.10 Beta-cryptogein. Chain: null. Synonym: beta-elicitin of phytophthora c VNG63492 cluster04 -> 2lisA0 5.7475580 131 / 75 conP: 0.210 CATH-ID: 1.20.150.10 Sperm lysin. Chain: a VNG63492 cluster13 -> 1bmtA1 10.492125 87 / 75 conP: 0.612 CATH-ID: 1.10.1240.10 Methionine synthase (b12-binding domains) --end-- VNG6353h one-of-top-five-correct: 0.300031304961732 CThresh: 6.999522 66 best_is: cluster02 VNG6353h cluster00 -> 1rlr02 5.8466310 105 / 93 conP: 0.174 CATH-ID: 1.10.395.10 Ribonucleotide reductase protein r1. Chain: null. Synonym: ribonucleos VNG6353h cluster01 -> 1byb00 3.8828622 490 / 93 conP: 0.007 CATH-ID: 3.20.20.80 Beta-amylase reacted with 200 mm maltose and complexed with maltotetra VNG6353h cluster02 -> 1pbv01 8.0354998 82 / 93 conP: 0.320 CATH-ID: 1.10.220.20 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: VNG6353h cluster03 -> 1rxf00 5.0423650 264 / 93 conP: 0.048 CATH-ID: 3.50.60.10 Deacetoxycephalosporin c synthase. Chain: null. Synonym: ring expandin VNG6353h cluster04 -> 1bob03 5.9113534 54 / 93 conP: 0.240 CATH-ID: 1.10.900.10 Histone acetyltransferase. Chain: null. Synonym: hat1. Engineered: yes --end-- VNG63541 one-of-top-five-correct: 0.329807161589547 CThresh: 2.244045 100 best_is: cluster05 VNG63541 cluster00 -> 1a8l01 6.0551062 117 / 51 conP: 0.179 CATH-ID: 3.40.30.10 Protein disulfide oxidoreductase. Chain: null. Engineered: yes VNG63541 cluster01 -> 1dhy02 6.9816067 146 / 51 conP: 0.160 CATH-ID: 3.10.180.10 2,3-dihydroxybiphenyl 1,2-dioxygenase. Chain: null. Synonym: kks102 bp VNG63541 cluster02 -> 1eilA1 6.9816067 132 / 51 conP: 0.188 CATH-ID: 3.10.180.10 2,3-dihydroxybiphenyl 1,2-dioxygenase. Chain: a. Synonym: biphenyl-2,3 VNG63541 cluster03 -> 1pea02 6.0551062 176 / 51 conP: 0.088 CATH-ID: 3.40.50.3800 Amidase operon. Chain: null. Fragment: amide receptor/negative regulat VNG63541 cluster04 -> 2trxA0 6.9816067 108 / 51 conP: 0.244 CATH-ID: 3.40.30.10 Thioredoxin VNG63541 cluster05 -> 2trxA0 7.2132319 108 / 51 conP: 0.256 CATH-ID: 3.40.30.10 Thioredoxin --end-- VNG63610 one-of-top-five-correct: 0.505242754770193 CThresh: 5.866393 75 best_is: cluster10 VNG63610 cluster00 -> 1dlc01 8.5564024 229 / 114 conP: 0.270 CATH-ID: 1.20.190.10 Delta-endotoxin cryiiia (bt13) VNG63610 cluster01 -> 1j4nA 7.6006431 249 / 114 conP: 0.199 CATH-TRUNC VNG63610 cluster02 -> 1c17M0 8.2301826 142 / 114 conP: 0.365 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG63610 cluster03 -> 1fjgT0 7.7659720 99 / 114 conP: 0.396 CATH-TRUNC VNG63610 cluster04 -> 1rlr03 6.2219935 299 / 114 conP: 0.110 CATH-ID: 3.90.244.10 Ribonucleotide reductase protein r1. Chain: null. Synonym: ribonucleos VNG63610 cluster10 -> 1g6wB 9.4199693 242 / 114 conP: 0.305 CATH-TRUNC --end-- VNG63612 one-of-top-five-correct: 0.281513776123066 CThresh: 6.980049 38 best_is: cluster16 VNG63612 cluster00 -> 1pfkA1 5.6376414 189 / 108 conP: 0.125 CATH-ID: 3.40.50.450 Phosphofructokinase (r-state) complex with fructose-1,6-bisphosphate a VNG63612 cluster01 -> 1dtwB1 6.8226622 125 / 108 conP: 0.233 CATH-ID: 3.40.50.920 Branched-chain alpha-keto acid dehydrogenase alpha subunit. Chain: a. VNG63612 cluster02 -> 1dik06 4.9831801 98 / 108 conP: 0.176 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG63612 cluster03 -> 1dbqA2 5.2039185 141 / 108 conP: 0.147 CATH-ID: 3.40.50.2700 Purine repressor. Chain: a, b. Fragment: corepressor-free corepressor- VNG63612 cluster04 -> 1gseA1 5.2053853 112 / 108 conP: 0.172 CATH-ID: 3.40.30.10 Glutathione transferase. Chain: a, b. Engineered: yes. Mutation: r15k. VNG63612 cluster16 -> 1al302 7.4392348 136 / 108 conP: 0.253 CATH-ID: 3.40.190.60 Cys regulon transcriptional activator cysb. Chain: null. Fragment: cof --end-- VNG63620 one-of-top-five-correct: 0.431452317166308 CThresh: 3.384514 75 best_is: cluster01 VNG63620 cluster00 -> 1ei5A3 5.3476018 102 / 72 conP: 0.226 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG63620 cluster01 -> 1qftA0 8.4379860 175 / 72 conP: 0.260 CATH-ID: 2.40.128.20 Female-specific histamine binding protein 2. Chain: a. Engineered: yes VNG63620 cluster02 -> 1f37A0 6.1420441 109 / 72 conP: 0.256 CATH-ID: 3.40.30.10 Ferredoxin [2fe-2s]. Chain: a, b. Engineered: yes VNG63620 cluster03 -> 1ipiA 5.8484850 114 / 72 conP: 0.231 CATH-TRUNC VNG63620 cluster04 -> 1qqcA2 4.5084405 252 / 72 conP: 0.051 CATH-ID: 3.30.420.10 DNA polymerase ii. Chain: a. Engineered: yes. Biological_unit: monomer --end-- VNG6365h one-of-top-five-correct: 0.314564847968253 CThresh: 6.966470 29 best_is: cluster01 VNG6365h cluster00 -> 1bucA3 6.6115615 141 / 106 conP: 0.201 CATH-ID: 1.20.140.10 Butyryl-coa dehydrogenase (bcad) (bacterial short-chain acyl-coa dehyd VNG6365h cluster01 -> 2occA0 7.9114300 514 / 106 conP: 0.030 CATH-ID: 1.20.210.10 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, VNG6365h cluster02 -> 1ixmA1 6.5800857 59 / 106 conP: 0.300 CATH-ID: 1.20.15.100 Sporulation response regulatory protein. Chain: a, b. Synonym: spo0b. VNG6365h cluster03 -> 1ithA0 5.9873359 141 / 106 conP: 0.173 CATH-ID: 1.10.490.10 Hemoglobin (cyanomet) VNG6365h cluster04 -> 2occA0 6.7972570 514 / 106 conP: 0.022 CATH-ID: 1.20.210.10 CytochromE C oxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, --end-- VNG6367h one-of-top-five-correct: 0.331103960120856 CThresh: 6.985547 75 best_is: cluster17 VNG6367h cluster00 -> 1cy5A0 5.5734212 92 / 108 conP: 0.208 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re VNG6367h cluster01 -> 1i6kA 4.4738025 316 / 108 conP: 0.043 NO-CATH VNG6367h cluster02 -> 1gln04 5.9741910 48 / 108 conP: 0.282 CATH-ID: 1.10.8.70 Glutamyl-tRNA synthetase. Chain: null VNG6367h cluster03 -> 1vpu00 6.1373296 45 / 108 conP: 0.295 CATH-ID: 1.10.195.10 Vpu protein. Chain: null. Fragment: cytoplasmic domain residues 39 - 8 VNG6367h cluster04 -> 2ezh00 5.9407911 65 / 108 conP: 0.258 CATH-ID: 1.10.10.60 Transposase. Chain: null. Fragment: igamma subdomain, residues 174 - 2 VNG6367h cluster17 -> 1ithA0 8.0816850 141 / 108 conP: 0.283 CATH-ID: 1.10.490.10 Hemoglobin (cyanomet) --end-- VNG6370h one-of-top-five-correct: 0.445908121910235 CThresh: 4.649075 75 best_is: cluster02 VNG6370h cluster00 -> 2sli02 7.7397903 383 / 82 conP: 0.046 CATH-ID: 2.120.10.10 Intramolecular trans-sialidase. Chain: null. Fragment: devoid of n-ter VNG6370h cluster01 -> 1f08A0 6.9366521 148 / 82 conP: 0.221 CATH-ID: 3.30.70.750 Replication protein e1. Chain: a, b. Fragment: DNA-binding domain. Eng VNG6370h cluster02 -> 1crzA2 8.9444975 260 / 82 conP: 0.163 CATH-ID: 2.130.10.20 Tolb protein. Chain: a. Engineered: yes VNG6370h cluster03 -> 1e8mA2 6.9366521 353 / 82 conP: 0.047 CATH-ID: 2.130.10.40 Prolyl endopeptidase. Chain: a. Synonym: prolyl endopeptidase, post-pr VNG6370h cluster04 -> 1qksA2 7.8364244 432 / 82 conP: 0.032 CATH-ID: 2.140.10.20 Cytochrome cd1 nitrite reductase. Chain: a, b. Biological_unit: dimer --end-- VNG6372h one-of-top-five-correct: 0.311820871729305 CThresh: 4.719379 75 best_is: cluster00 VNG6372h cluster00 -> 1vom02 7.3356071 244 / 85 conP: 0.132 CATH-ID: 3.30.538.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y VNG6372h cluster01 -> 1vom02 7.0344997 244 / 85 conP: 0.122 CATH-ID: 3.30.538.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y VNG6372h cluster02 -> 1vom02 6.6372854 244 / 85 conP: 0.110 CATH-ID: 3.30.538.10 Myosin. Chain: null. Fragment: truncated at residue 762. Engineered: y VNG6372h cluster03 -> 1hw7A 7.0344997 229 / 85 conP: 0.136 NO-CATH VNG6372h cluster04 -> 1dxxA1 4.8950044 113 / 85 conP: 0.181 CATH-ID: 1.10.418.10 Dystrophin. Chain: a, b, c, d. Fragment: actin-binding. Engineered: ye --end-- VNG6378h one-of-top-five-correct: 0.173657801409055 CThresh: 10.447777 25 best_is: cluster19 VNG6378h cluster00 -> 1jud02 4.2612479 75 / 137 conP: 0.110 CATH-ID: 1.10.164.10 L-2-haloacid dehalogenase. Chain: null. Engineered: yes VNG6378h cluster01 -> 1jscA 4.9104077 541 / 137 conP: 0.014 NO-CATH VNG6378h cluster02 -> 1fq1A0 5.6456879 183 / 137 conP: 0.096 CATH-ID: 3.90.190.10 Cyclin-dependent kinase inhibitor 3. Chain: a. Engineered: yes. Mutati VNG6378h cluster03 -> 1amf01 3.6301435 119 / 137 conP: 0.076 CATH-ID: 3.40.190.10 Molybdate transport protein moda. Chain: null. Fragment: n-domain, c-d VNG6378h cluster04 -> 1a7602 5.2109993 60 / 137 conP: 0.150 CATH-ID: 1.10.150.20 Flap endonuclease-1 protein. Chain: null VNG6378h cluster19 -> 1fjgR0 6.6461605 73 / 137 conP: 0.200 --end-- VNG63793 one-of-top-five-correct: 0.362575538127566 CThresh: 2.236889 100 best_is: cluster09 VNG63793 cluster00 -> 1cy5A0 5.5001509 92 / 53 conP: 0.218 CATH-ID: 1.10.533.10 Apoptotic protease activating factor 1. Chain: a. Fragment: caspase re VNG63793 cluster01 -> 1dnpA3 6.4160811 181 / 53 conP: 0.101 CATH-ID: 1.10.579.10 DNA photolyase. Chain: a, b. Synonym: DNA cyclobutane dipyrimidine pho VNG63793 cluster02 -> 1dgnA0 5.7291335 89 / 53 conP: 0.236 CATH-ID: 1.10.533.10 Iceberg (protease inhibitor). Chain: a. Fragment: residues 2-90. Engin VNG63793 cluster03 -> 1chkA1 6.4160811 143 / 53 conP: 0.156 CATH-ID: 1.20.141.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG63793 cluster04 -> 1agrE2 5.9581160 80 / 53 conP: 0.271 CATH-ID: 1.10.167.10 Guanine nucleotide-binding protein g(i). Chain: a, d. Fragment: alpha- VNG63793 cluster09 -> 1qgkA 7.5609937 876 / 53 conP: 0.000 NO-CATH --end-- VNG6384h one-of-top-five-correct: 0.203435103058076 CThresh: 4.570881 75 best_is: cluster01 VNG6384h cluster00 -> 1sfe01 6.3590461 81 / 56 conP: 0.208 CATH-ID: 3.30.160.70 Ada o6-methylguanine-DNA methyltransferase. Chain: null. Fragment: c-t VNG6384h cluster01 -> 1b4uA0 6.3590461 132 / 56 conP: 0.122 CATH-ID: 1.10.700.10 Protocatechuate 4,5-dioxygenase. Chain: a, b, c, d. Fragment: chain a, VNG6384h cluster02 -> 1ei5A2 5.1453265 82 / 56 conP: 0.155 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG6384h cluster03 -> 1bak00 5.5958156 119 / 56 conP: 0.116 CATH-ID: 2.30.29.30 G-protein coupled receptor kinase 2. Chain: null. Fragment: c-terminal VNG6384h cluster04 -> 1ptf00 4.9200819 87 / 56 conP: 0.139 CATH-ID: 3.30.70.90 Histidine-containing phosphocarrier protein (hpr) --end-- VNG6385h one-of-top-five-correct: 0.217187148978193 CThresh: 9.031091 25 best_is: cluster00 VNG6385h cluster00 -> 1ile01 6.9463037 254 / 129 conP: 0.115 CATH-ID: 1.10.730.10 Isoleucyl-tRNA synthetase. Chain: null. Synonym: ilers. Engineered: cl VNG6385h cluster01 -> 1hfc00 5.5164775 157 / 129 conP: 0.127 CATH-ID: 3.40.390.10 Fibroblast collagenase VNG6385h cluster02 -> 19hcA1 5.5380254 155 / 129 conP: 0.129 CATH-ID: 3.90.10.10 Nine-haem cytochromE C. Chain: a, b VNG6385h cluster03 -> 1gy5A 4.0016129 123 / 129 conP: 0.102 NO-CATH VNG6385h cluster04 -> 1ytfD1 5.9581160 53 / 129 conP: 0.225 CATH-ID: 1.20.15.160 Yeast tata-box binding protein. Chain: a. Fragment: c-terminal 180 ami --end-- VNG6387h one-of-top-five-correct: 0.187143249467888 CThresh: 6.991417 55 best_is: cluster04 VNG6387h cluster00 -> 1il600 4.0864424 166 / 102 conP: 0.087 CATH-ID: 1.20.120.200 Interleukin-6. Chain: null VNG6387h cluster01 -> 2aaiB2 4.7145265 124 / 102 conP: 0.132 CATH-ID: 2.80.10.50 Ricin VNG6387h cluster02 -> 1d0qA0 3.7443042 102 / 102 conP: 0.118 CATH-ID: 3.90.580.10 DNA primase. Chain: a, b. Fragment: zinc-binding domain. Engineered: y VNG6387h cluster03 -> 1cz4A1 3.2825522 92 / 102 conP: 0.112 CATH-ID: 2.40.40.20 Vcp-like atpase. Chain: a. Fragment: n-terminal domain: m1 to e183 fol VNG6387h cluster04 -> 1fgs02 6.1254090 70 / 102 conP: 0.249 CATH-ID: 3.30.790.10 Folylpolyglutamate synthetase. Chain: null. Synonym: fpgs. Engineered: --end-- VNG6390h one-of-top-five-correct: 0.212374445733704 CThresh: 5.295054 75 best_is: cluster05 VNG6390h cluster00 -> 1c8kA2 4.6242899 327 / 52 conP: 0.004 CATH-ID: 3.40.670.10 Glycogen phosphorylase. Chain: a. Ec: 2.4.1.1 VNG6390h cluster01 -> 1yrnA0 4.4299916 49 / 52 conP: 0.151 CATH-ID: 1.10.10.60 Mating-type protein a-1. Chain: a. Domain: homeodomain. Synonym: mat a VNG6390h cluster02 -> 3crd00 5.5454416 100 / 52 conP: 0.110 CATH-ID: 1.10.533.10 Raidd. Chain: null. Fragment: card domain. Engineered: yes VNG6390h cluster03 -> 1gab00 5.2720268 53 / 52 conP: 0.177 CATH-ID: 1.10.8.40 Protein pab. Chain: null. Fragment: albumin-binding domain, residues 2 VNG6390h cluster04 -> 1g71A 5.5454416 344 / 52 conP: 0.005 NO-CATH VNG6390h cluster05 -> 1e96B0 6.9271692 185 / 52 conP: 0.055 CATH-ID: 1.25.40.10 Ras-related c3 botulinum toxin substrate 1. Chain: a. Synonym: rac1. E --end-- VNG6391h one-of-top-five-correct: 0.379881228492374 CThresh: 2.458536 100 best_is: cluster06 VNG6391h cluster00 -> 1bq7A0 6.4964821 186 / 66 conP: 0.153 CATH-ID: 3.40.30.10 Disulfide oxidoreductase. Chain: a, b, c, d, e, f. Synonym: dsba. Engi VNG6391h cluster01 -> 1dik05 7.1396865 89 / 66 conP: 0.379 CATH-ID: 1.20.80.30 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG6391h cluster02 -> 2hmqA0 7.4414752 113 / 66 conP: 0.340 CATH-ID: 1.20.120.50 Hemerythrin (met) VNG6391h cluster03 -> 1aisB1 6.7108836 99 / 66 conP: 0.326 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG6391h cluster04 -> 1efuB2 7.1396865 86 / 66 conP: 0.386 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran VNG6391h cluster06 -> 2hmqA0 7.5684895 113 / 66 conP: 0.348 CATH-ID: 1.20.120.50 Hemerythrin (met) --end-- VNG6393h one-of-top-five-correct: 0.408950968545354 CThresh: 8.779572 25 best_is: cluster19 VNG6393h cluster00 -> 1lkyA 5.8105128 77 / 135 conP: 0.215 NO-CATH VNG6393h cluster01 -> 1rpo00 6.7100284 61 / 135 conP: 0.279 CATH-ID: 1.20.15.200 Rop (cole1 repressor of primer) mutant with ala inserted on either sid VNG6393h cluster02 -> 1fjgT0 8.8851212 99 / 135 conP: 0.373 CATH-TRUNC VNG6393h cluster03 -> 1aj8A2 7.6207706 98 / 135 conP: 0.293 CATH-ID: 1.10.230.10 Citrate synthase. Chain: a, b. Engineered: yes. Biological_unit: dimer VNG6393h cluster04 -> 1bdp01 6.1499344 194 / 135 conP: 0.142 CATH-ID: 3.30.420.10 DNA polymerase i. Chain: null. Fragment: residues 297 - 876 of wild ty VNG6393h cluster19 -> 1aj8A2 9.1972823 98 / 135 conP: 0.395 CATH-ID: 1.10.230.10 Citrate synthase. Chain: a, b. Engineered: yes. Biological_unit: dimer --end-- VNG63952 one-of-top-five-correct: 0.03599245184707 CThresh: 2.758486 100 best_is: --end-- VNG6396h one-of-top-five-correct: 0.230239738478069 CThresh: 8.340724 25 best_is: cluster18 VNG6396h cluster00 -> 1g3sA 5.9304500 212 / 122 conP: 0.113 NO-CATH VNG6396h cluster01 -> 1kqjA 5.1698461 225 / 122 conP: 0.086 NO-CATH VNG6396h cluster02 -> 1molA0 6.1563764 94 / 122 conP: 0.210 CATH-ID: 3.10.30.10 Monellin (single-chain, fused) VNG6396h cluster03 -> 1agrE1 5.3151396 47 / 122 conP: 0.215 CATH-ID: 1.10.196.10 Guanine nucleotide-binding protein g(i). Chain: a, d. Fragment: alpha- VNG6396h cluster04 -> 1t7pA3 5.4721522 178 / 122 conP: 0.119 CATH-ID: 3.30.70.370 DNA polymerase. Chain: a. Engineered: yes. Mutation: del(118-123). Thi VNG6396h cluster18 -> 1kfiA 6.9984074 570 / 122 conP: 0.022 NO-CATH --end-- VNG64000 one-of-top-five-correct: 0.0171138721717562 CThresh: 7.363122 25 best_is: --end-- VNG64001 one-of-top-five-correct: 0.0224914350058635 CThresh: 5.680593 75 best_is: --end-- VNG64060 one-of-top-five-correct: 0.0209901796635242 CThresh: 6.106849 75 best_is: --end-- VNG6407h one-of-top-five-correct: 0.434791411280506 CThresh: 2.611261 100 best_is: cluster14 VNG6407h cluster00 -> 1ft1A0 7.1217693 315 / 57 conP: 0.029 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes VNG6407h cluster01 -> 1b25A2 6.8977153 178 / 57 conP: 0.130 CATH-ID: 1.10.569.10 Formaldehyde ferredoxin oxidoreductase. Chain: a, b, c, d. Fragment: d VNG6407h cluster02 -> 1agrE2 6.8977153 80 / 57 conP: 0.332 CATH-ID: 1.10.167.10 Guanine nucleotide-binding protein g(i). Chain: a, d. Fragment: alpha- VNG6407h cluster03 -> 1fnnA1 6.6736612 101 / 57 conP: 0.265 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG6407h cluster04 -> 4crxA2 7.1217693 111 / 57 conP: 0.266 CATH-ID: 1.10.150.130 Cre recombinase. Chain: a, b. Engineered: yes. Mutation: r173k. Biolog VNG6407h cluster14 -> 1ft1A0 8.4660938 315 / 57 conP: 0.042 CATH-ID: 1.25.40.120 Protein farnesyltransferase. Chain: a, b. Engineered: yes --end-- VNG6409h one-of-top-five-correct: 0.396440792937251 CThresh: 2.862573 100 best_is: cluster10 VNG6409h cluster00 -> 1ab402 7.8586159 86 / 60 conP: 0.382 CATH-ID: 3.30.70.220 Gyrase a. Chain: null. Fragment: 59kda fragment. Engineered: yes. Biol VNG6409h cluster01 -> 1foiA 6.0935382 416 / 60 conP: 0.008 NO-CATH VNG6409h cluster02 -> 1lkyA 6.3141729 77 / 60 conP: 0.306 NO-CATH VNG6409h cluster03 -> 1di6A0 7.1967117 183 / 60 conP: 0.142 CATH-ID: 3.40.980.10 Molybdenum cofactor biosythetic enzyme. Chain: a. Synonym: moga. Engin VNG6409h cluster04 -> 1fnnA1 6.7554423 101 / 60 conP: 0.274 CATH-ID: 1.10.8.60 Cell division control protein 6. Chain: a, b. Synonym: cdc6p. Engineer VNG6409h cluster10 -> 1chkA2 8.0792506 95 / 60 conP: 0.373 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes --end-- VNG6412h one-of-top-five-correct: 0.590538797949129 CThresh: 4.255658 75 best_is: cluster09 VNG6412h cluster00 -> 1dvkA0 7.6515070 149 / 79 conP: 0.261 CATH-ID: 1.20.940.10 Prp18. Chain: a, b. Engineered: yes VNG6412h cluster01 -> 1iizA 7.0423091 120 / 79 conP: 0.277 NO-CATH VNG6412h cluster02 -> 1aua02 5.9348413 83 / 79 conP: 0.278 CATH-ID: 1.10.8.20 Phosphatidylinositol transfer protein sec14p. Chain: null. Engineered: VNG6412h cluster03 -> 1fjgT0 8.2373636 99 / 79 conP: 0.394 CATH-TRUNC VNG6412h cluster04 -> 1rypB0 7.6515070 250 / 79 conP: 0.126 CATH-ID: 3.60.20.10 20s proteasome. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, VNG6412h cluster09 -> 1e7aA5 10.431513 112 / 79 conP: 0.522 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes --end-- VNG6418h one-of-top-five-correct: 0.208814271471244 CThresh: 8.223581 25 best_is: cluster13 VNG6418h cluster00 -> 1c17M0 5.9377067 142 / 111 conP: 0.143 CATH-ID: 1.20.120.220 Atp synthase subunit c. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Eng VNG6418h cluster01 -> 1e25A0 5.7474266 270 / 111 conP: 0.066 CATH-ID: 3.40.710.10 Extended-spectrum beta-lactamase per-1. Chain: a. Engineered: yes. Mut VNG6418h cluster02 -> 1f5mA0 5.7546068 176 / 111 conP: 0.113 CATH-ID: 3.30.450.40 Gaf. Chain: a, b. Engineered: yes VNG6418h cluster03 -> 1dik06 6.8176531 98 / 111 conP: 0.221 CATH-ID: 3.30.470.20 Pyruvate phosphate dikinase. Chain: null. Synonym: ppdk. Engineered: y VNG6418h cluster04 -> 1f5mA0 6.3288360 176 / 111 conP: 0.131 CATH-ID: 3.30.450.40 Gaf. Chain: a, b. Engineered: yes VNG6418h cluster13 -> 1hdcA0 6.8532064 253 / 111 conP: 0.097 CATH-ID: 3.40.50.720 3-alpha, 20-beta-hydroxysteroid dehydrogenase complexed with carbenoxo --end-- VNG6419h one-of-top-five-correct: 0.244496173248512 CThresh: 6.985616 42 best_is: cluster08 VNG6419h cluster00 -> 3tgl00 5.9943779 265 / 95 conP: 0.065 CATH-ID: 3.40.50.950 Triacylglycerol acylhydrolase VNG6419h cluster01 -> 1cex00 4.6107648 197 / 95 conP: 0.072 CATH-ID: 3.40.50.950 Cutinase. Chain: null. Engineered: yes VNG6419h cluster02 -> 2pgd01 4.3500452 180 / 95 conP: 0.075 CATH-ID: 3.40.50.720 6-phosphogluconate dehydrogenase (6-pgdh) VNG6419h cluster03 -> 1fiqB2 6.4519187 126 / 95 conP: 0.182 CATH-ID: 3.30.465.10 Xanthine oxidase. Chain: a. Fragment: residues 1-219. Synonym: xo. Xan VNG6419h cluster04 -> 1elrA0 5.1867734 128 / 95 conP: 0.132 CATH-ID: 1.25.40.10 Tpr2a-domain of hop. Chain: a. Fragment: middle domain. Engineered: ye VNG6419h cluster08 -> 1qmgA1 7.2142980 219 / 95 conP: 0.122 CATH-ID: 3.40.50.720 Acetohydroxy-acid isomeroreductase. Chain: a, b, c, d. Synonym: keto-a --end-- VNG64210 one-of-top-five-correct: 0.0188906135786016 CThresh: 6.755952 75 best_is: --end-- VNG6429h one-of-top-five-correct: 0.0936092303673788 CThresh: 10.356328 25 best_is: cluster04 VNG6429h cluster00 -> 1a0aA0 4.6651824 63 / 124 conP: 0.118 CATH-ID: 4.10.280.10 Phosphate system positive regulatory protein pho4. Chain: a, b. Fragme VNG6429h cluster01 -> 1gdhA1 3.7006239 128 / 124 conP: 0.066 CATH-ID: 3.40.50.720 D-glycerate dehydrogenase (apo form) VNG6429h cluster02 -> 1hyqA0 4.7519934 232 / 124 conP: 0.050 CATH-ID: 3.40.50.150 Cell division inhibitor (mind-1). Chain: a. Synonym: mind. Engineered: VNG6429h cluster03 -> 1mkp00 3.9560928 144 / 124 conP: 0.065 CATH-ID: 3.90.190.10 Pyst1. Chain: null. Fragment: catalytic domain. Synonym: dual specific VNG6429h cluster04 -> 1pjr03 4.9558860 200 / 124 conP: 0.063 CATH-ID: 3.40.50.300 Pcra. Chain: null. Engineered: yes --end-- VNG6431h one-of-top-five-correct: 0.299432630210426 CThresh: 6.071517 75 best_is: cluster07 VNG6431h cluster00 -> 1gsh03 5.4967393 61 / 75 conP: 0.206 CATH-ID: 2.30.35.30 Glutathione biosynthetic ligase. Chain: null. Synonym: glutathione syn VNG6431h cluster01 -> 1dqzA0 4.0972738 280 / 75 conP: 0.022 CATH-ID: 3.40.50.1820 Antigen 85-c. Chain: a, b. Synonym: 85c VNG6431h cluster02 -> 1b7gO1 5.0404852 156 / 75 conP: 0.086 CATH-ID: 3.40.50.720 Glyceraldehyde 3-phosphate dehydrogenase. Chain: o, q. Engineered: yes VNG6431h cluster03 -> 1ai4B 5.2448482 557 / 75 conP: 0.002 NO-CATH VNG6431h cluster04 -> 1gca01 5.7475580 148 / 75 conP: 0.110 CATH-ID: 3.40.50.3300 Glucose/galactose-binding protein complex with galactose VNG6431h cluster07 -> 1bgvA1 8.0166987 167 / 75 conP: 0.166 CATH-ID: 3.40.50.720 Glutamate dehydrogenase. Chain: a. Biological_unit: homohexamer --end-- VNG6432h one-of-top-five-correct: 0.169741563203891 CThresh: 9.827478 25 best_is: cluster03 VNG6432h cluster00 -> 1av401 4.7726430 87 / 136 conP: 0.133 CATH-ID: 3.10.30.70 Amine oxidase. Chain: null. Synonym: agao. Biological_unit: dimer VNG6432h cluster01 -> 1elwA0 5.0309223 117 / 136 conP: 0.124 CATH-ID: 1.25.40.10 Tpr1-domain of hop. Chain: a, b. Fragment: n-terminal domain. Engineer VNG6432h cluster02 -> 1vig00 3.9508329 71 / 136 conP: 0.117 CATH-ID: 3.30.70.210 Vigilin. Chain: null. Fragment: kh6, residues 432 to 501. Engineered: VNG6432h cluster03 -> 1aba00 6.3122327 87 / 136 conP: 0.194 CATH-ID: 3.40.30.10 Glutaredoxin mutant with val 15 replaced by gly and tyr 16 replaced by VNG6432h cluster04 -> 1qf6A3 5.0848658 52 / 136 conP: 0.168 CATH-ID: 3.30.54.20 Threonyl-tRNA synthetase. Chain: a. Synonym: thrrs. Threonine tRNA. Ch --end-- VNG6434h one-of-top-five-correct: 0.267527560602026 CThresh: 3.681894 75 best_is: cluster09 VNG6434h cluster00 -> 191400 6.3914577 171 / 49 conP: 0.069 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG6434h cluster01 -> 1guxB0 5.9226563 141 / 49 conP: 0.090 CATH-ID: 1.10.472.10 Retinoblastoma protein. Chain: a, b. Fragment: pocket domain. Engineer VNG6434h cluster02 -> 1eijA0 5.4538549 72 / 49 conP: 0.189 CATH-ID: 1.10.1190.10 Hypothetical protein mth1615. Chain: a. Other_details: homologous to h VNG6434h cluster03 -> 1a3aA0 5.4538549 145 / 49 conP: 0.076 CATH-ID: 3.40.930.10 Mannitol-specific eii. Chain: a, b, c, d. Fragment: iia domain, residu VNG6434h cluster04 -> 191400 5.9226563 171 / 49 conP: 0.061 CATH-ID: 3.30.720.10 Signal recognition particle 9/14 fusion protein. Chain: null. Fragment VNG6434h cluster09 -> 1efuB2 7.0946598 86 / 49 conP: 0.234 CATH-ID: 3.50.13.10 Elongation factor tu. Chain: a, c. Synonym: elongation factor for tran --end-- VNG6437c one-of-top-five-correct: 0.232416143346195 CThresh: 8.195178 25 best_is: cluster08 VNG6437c cluster00 -> 1dp4A2 5.0312242 210 / 136 conP: 0.113 CATH-ID: 3.40.50.9700 Atrial natriuretic peptide receptor a. Chain: a, c. Fragment: hormone VNG6437c cluster01 -> 1ospO3 6.2661702 102 / 136 conP: 0.241 CATH-ID: 3.66.10.1 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG6437c cluster02 -> 1d09B1 5.2107702 93 / 136 conP: 0.197 CATH-ID: 3.30.70.140 Aspartate carbamoyltransferase catalytic chain. Chain: a, c. Engineere VNG6437c cluster03 -> 1ospO3 5.5456370 102 / 136 conP: 0.205 CATH-ID: 3.66.10.1 Fab 184.1. Chain: l, h. Outer surface protein a. Chain: o. Synonym: os VNG6437c cluster04 -> 1vie00 4.1078257 60 / 136 conP: 0.174 CATH-ID: 2.30.30.60 Dihydrofolate reductase. Chain: null. Synonym: r67 dhfr. Ec: 1.5.1.3 VNG6437c cluster08 -> 1prn00 6.6471223 289 / 136 conP: 0.119 CATH-ID: 2.40.160.10 Porin --end-- VNG64420 one-of-top-five-correct: 0.0155556096102927 CThresh: 7.948966 25 best_is: --end-- VNG64422 one-of-top-five-correct: 0.0267023528553523 CThresh: 4.618587 75 best_is: --end-- VNG6446h one-of-top-five-correct: 0.159520693961916 CThresh: 1.711986 100 best_is: cluster10 VNG6446h cluster00 -> 1b3qA2 4.7280758 174 / 35 conP: 0.023 CATH-ID: 3.30.565.20 Chemotaxis protein chea. Chain: a, b. Fragment: dimerization domain, k VNG6446h cluster01 -> 1bby00 4.7280758 69 / 35 conP: 0.158 CATH-ID: 1.10.10.10 Rap30. Chain: null. Fragment: DNA-binding domain. Synonym: transcripti VNG6446h cluster02 -> 1jgtA 4.7280758 490 / 35 conP: 0.000 NO-CATH VNG6446h cluster03 -> 1dnyA0 4.4692423 76 / 35 conP: 0.132 CATH-ID: 1.10.1200.10 Non-ribosomal peptide synthetase peptidyl carrier protein. Chain: a. F VNG6446h cluster04 -> 1a81A2 4.4692423 45 / 35 conP: 0.220 CATH-ID: 1.10.930.10 Syk kinase. Chain: a, c, e, g, i, k. Fragment: tandem sh2 domain. Engi VNG6446h cluster10 -> 14psA0 4.7280758 226 / 35 conP: 0.008 CATH-ID: 1.20.190.20 14-3-3 protein zeta/delta. Chain: a, b. Engineered: yes. Biological_un --end-- VNG64472 one-of-top-five-correct: 0.0388931247594122 CThresh: 2.272426 100 best_is: --end-- VNG6448h one-of-top-five-correct: 0.281399729604712 CThresh: 9.757037 25 best_is: cluster06 VNG6448h cluster00 -> 1e7aA2 6.0121498 90 / 125 conP: 0.164 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6448h cluster01 -> 1a0b00 5.6287530 117 / 125 conP: 0.131 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG6448h cluster02 -> 1pjr01 5.4316723 202 / 125 conP: 0.081 CATH-ID: 3.40.50.300 Pcra. Chain: null. Engineered: yes VNG6448h cluster03 -> 1k8tA 5.2912668 498 / 125 conP: 0.016 NO-CATH VNG6448h cluster04 -> 2asr00 5.1465038 142 / 125 conP: 0.103 CATH-ID: 1.20.120.30 Aspartate receptor (ligand binding domain) VNG6448h cluster06 -> 2a3dA0 8.3099873 73 / 125 conP: 0.295 CATH-ID: 1.20.1040.90 De novo three-helix bundle. Chain: a. Engineered: yes --end-- VNG6449h one-of-top-five-correct: 0.335245300384199 CThresh: 7.222172 25 best_is: cluster00 VNG6449h cluster00 -> 1e42A2 8.8320572 116 / 82 conP: 0.265 CATH-ID: 3.30.310.10 Beta2-adaptin. Synonym: plasma membrane adaptor ha2/ap2 adaptin beta s VNG6449h cluster01 -> 1e42A2 5.2249103 116 / 82 conP: 0.113 CATH-ID: 3.30.310.10 Beta2-adaptin. Synonym: plasma membrane adaptor ha2/ap2 adaptin beta s VNG6449h cluster02 -> 1qubA3 5.5731961 62 / 82 conP: 0.182 CATH-ID: 2.10.70.10 Human beta2-glycoprotein i. Chain: a. Fragment: beta2-glycoprotein i VNG6449h cluster03 -> 1ei5A3 5.8778013 102 / 82 conP: 0.148 CATH-ID: 2.40.128.50 D-aminopeptidase. Chain: a. Synonym: dap. Engineered: yes VNG6449h cluster04 -> 1rthA5 3.9248838 117 / 82 conP: 0.080 CATH-ID: 3.30.420.10 HIV-1 reverse transcriptase. Chain: a, b. Synonym: HIV-1 rt. Engineere --end-- VNG6454c one-of-top-five-correct: 0.478461060697964 CThresh: 5.268076 75 best_is: cluster09 VNG6454c cluster00 -> 1ars02 7.9669770 271 / 133 conP: 0.285 CATH-ID: 3.40.640.10 Aspartate aminotransferase complexed with pyridoxal-5'-phosphate VNG6454c cluster01 -> 1mbe00 6.7722532 52 / 133 conP: 0.472 CATH-ID: 1.10.10.60 Myb proto-oncogene protein. Domain: DNA-binding domain repeat 1. Other VNG6454c cluster02 -> 1b22A0 6.7170093 70 / 133 conP: 0.445 CATH-ID: 1.10.150.70 DNA repair protein rad51. Chain: a. Fragment: n-terminal domain. Engin VNG6454c cluster03 -> 1idy00 6.6747465 54 / 133 conP: 0.463 CATH-ID: 1.10.10.60 MousE C-myb DNA-binding domain repeat 3. Chain: null. Engineered: yes. VNG6454c cluster04 -> 1ku3A 7.0962909 61 / 133 conP: 0.484 NO-CATH VNG6454c cluster09 -> 1sfe02 8.4225744 84 / 133 conP: 0.549 CATH-ID: 1.10.10.10 Ada o6-methylguanine-DNA methyltransferase. Chain: null. Fragment: c-t --end-- VNG64550 one-of-top-five-correct: 0.33336925066153 CThresh: 5.403408 75 best_is: cluster15 VNG64550 cluster00 -> 1l5jA 5.2440298 862 / 78 conP: 0.000 NO-CATH VNG64550 cluster01 -> 1gsoA2 6.7957192 64 / 78 conP: 0.308 CATH-ID: 2.30.35.30 Glycinamide ribonucleotide synthetase. Chain: a. Synonym: purd gen pro VNG64550 cluster02 -> 1cmxA0 6.0594342 214 / 78 conP: 0.086 CATH-ID: 3.40.532.10 Ubiquitin yuh1-ubal. Chain: a, c. Fragment: all. Engineered: yes. Biol VNG64550 cluster03 -> 1lylA2 6.8640320 342 / 78 conP: 0.036 CATH-ID: 3.40.690.10 Lysyl-tRNA synthetase (lysu). Chain: a, b, c. Lysine. Chain: x, y, z VNG64550 cluster04 -> 2antI2 5.9795633 256 / 78 conP: 0.059 CATH-ID: 3.30.497.10 Antithrombin. Chain: l, i. Biological_unit: monomer. Other_details: an VNG64550 cluster15 -> 1bu2A1 8.0752328 112 / 78 conP: 0.295 CATH-ID: 1.10.472.10 Cyclin homolog. Chain: a. Engineered: yes --end-- VNG6456h one-of-top-five-correct: 0.258249177488255 CThresh: 2.490155 100 best_is: cluster05 VNG6456h cluster00 -> 1dioA 5.2666648 551 / 48 conP: 0.000 NO-CATH VNG6456h cluster01 -> 1pbv01 4.5591387 82 / 48 conP: 0.165 CATH-ID: 1.10.220.20 Arno. Chain: null. Fragment: sec7 domain, residues 50 - 252. Synonym: VNG6456h cluster02 -> 1qqeA0 5.9741910 281 / 48 conP: 0.016 CATH-ID: 1.25.40.10 Vesicular transport protein sec17. Chain: a. Engineered: yes. Mutation VNG6456h cluster03 -> 1sknP0 5.7383489 74 / 48 conP: 0.238 CATH-ID: 1.10.880.10 Transcription factor skn-1. Chain: p. Fragment: binding domain. Engine VNG6456h cluster04 -> 1hiwA0 6.2100330 115 / 48 conP: 0.164 CATH-ID: 1.10.150.90 HIV-1 matrix protein. Chain: a, b, c, q, r, s. Fragment: core protein VNG6456h cluster05 -> 1mxa03 6.4458751 106 / 48 conP: 0.193 CATH-ID: 3.30.300.10 S-adenosylmethionine synthetase. Chain: null. Synonym: mat, atp\:l-met --end-- VNG64610 one-of-top-five-correct: 0.510711473258542 CThresh: 3.298053 75 best_is: cluster05 VNG64610 cluster00 -> 1bjt04 8.0998323 102 / 69 conP: 0.382 CATH-ID: 3.30.70.230 Topoisomerase ii. Chain: null. Fragment: DNA-binding and cleavage core VNG64610 cluster01 -> 1af500 7.1955437 126 / 69 conP: 0.272 CATH-ID: 3.10.28.10 I-crei. Chain: null. Synonym: DNA endonuclease i-crei. Engineered: yes VNG64610 cluster02 -> 1af500 8.0704818 126 / 69 conP: 0.325 CATH-ID: 3.10.28.10 I-crei. Chain: null. Synonym: DNA endonuclease i-crei. Engineered: yes VNG64610 cluster03 -> 1qfjB1 4.9236322 91 / 69 conP: 0.217 CATH-ID: 2.40.30.10 Flavin reductase. Chain: a, b, c, d. Engineered: yes. Biological_unit: VNG64610 cluster04 -> 1i4fA 7.2242911 275 / 69 conP: 0.077 CATH-TRUNC VNG64610 cluster05 -> 1tplA1 9.3397679 181 / 69 conP: 0.284 CATH-ID: 3.30.70.160 Tyrosine phenol-lyase --end-- VNG64640 one-of-top-five-correct: 0.0246968486235596 CThresh: 5.102309 75 best_is: --end-- VNG64641 one-of-top-five-correct: 0.022794946516261 CThresh: 5.597805 75 best_is: --end-- VNG64650 one-of-top-five-correct: 0.0344593454189577 CThresh: 3.030836 75 best_is: --end-- VNG64651 one-of-top-five-correct: 0.0204437226647073 CThresh: 6.269450 75 best_is: --end-- VNG6474h one-of-top-five-correct: 0.348434336593093 CThresh: 2.252985 100 best_is: cluster00 VNG6474h cluster00 -> 2dnjA0 7.4448570 253 / 51 conP: 0.048 CATH-ID: 3.60.10.10 Deoxyribonuclease i (dnase i) complexed with DNA (5'-d( Gp Cp Gp Ap Tp VNG6474h cluster01 -> 1cvjA2 6.5183565 92 / 51 conP: 0.259 CATH-ID: 3.30.70.330 Polydenylate binding protein 1. Chain: a, b, c, d, e, f, g, h. Fragmen VNG6474h cluster02 -> 1ha101 6.9816067 85 / 51 conP: 0.306 CATH-ID: 3.30.70.330 Hnrnp a1. Chain: null. Fragment: hnrnp a1 (rbd1, rbd2). Synonym: heter VNG6474h cluster03 -> 1e8gA3 6.7499816 231 / 51 conP: 0.053 CATH-ID: 3.40.462.10 Vanillyl-alcohol oxidase. Chain: a, b. Synonym: aryl-alcohol oxidase, VNG6474h cluster04 -> 2dnjA0 7.4448570 253 / 51 conP: 0.048 CATH-ID: 3.60.10.10 Deoxyribonuclease i (dnase i) complexed with DNA (5'-d( Gp Cp Gp Ap Tp --end-- VNG6475h one-of-top-five-correct: 0.349203248682308 CThresh: 3.445457 75 best_is: cluster09 VNG6475h cluster00 -> 1ej5A0 7.2244547 107 / 55 conP: 0.234 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: VNG6475h cluster01 -> 1chkA2 6.9979926 95 / 55 conP: 0.250 CATH-ID: 3.30.386.10 Chitosanase. Chain: a, b. Synonym: endochitosanase. Engineered: yes VNG6475h cluster02 -> 1c07A0 7.6773788 95 / 55 conP: 0.288 CATH-ID: 1.10.238.10 Epidermal growth factor receptor pathway substrate 15. Chain: a. Fragm VNG6475h cluster03 -> 1a0b00 6.5450685 117 / 55 conP: 0.181 CATH-ID: 1.20.120.160 Aerobic respiration control sensor protein arcb. Chain: null. Fragment VNG6475h cluster04 -> 1fadA0 6.7033501 95 / 55 conP: 0.234 CATH-ID: 1.10.533.10 Fadd protein. Chain: a. Fragment: death domain (residues 89-183). Engi VNG6475h cluster09 -> 1ej5A0 7.9038409 107 / 55 conP: 0.271 CATH-ID: 1.10.850.10 Wiskott-aldrich syndrome protein. Chain: a. Synonym: wasp. Engineered: --end-- VNG6478h one-of-top-five-correct: 0.379455822778665 CThresh: 6.462653 75 best_is: cluster16 VNG6478h cluster00 -> 1bgxT6 5.9910981 144 / 92 conP: 0.154 CATH-ID: 1.10.473.10 Taq DNA polymerase. Chain: t. Engineered: yes. Biological_unit: monome VNG6478h cluster01 -> 2tpt01 7.0422827 107 / 92 conP: 0.246 CATH-ID: 1.20.970.10 Thymidine phosphorylase. Chain: null. Biological_unit: dimer. Other_de VNG6478h cluster02 -> 1jgjA0 6.0361037 217 / 92 conP: 0.095 CATH-ID: 1.20.85.10 Sensory rhodopsin ii. Chain: a. Engineered: yes VNG6478h cluster03 -> 1h97A0 8.5566376 147 / 92 conP: 0.271 CATH-ID: 1.10.490.10 Globin-3. Chain: a, b. Engineered: yes. Synonym: myoglobin, hemoglobin VNG6478h cluster04 -> 1ew6A0 5.6437280 137 / 92 conP: 0.148 CATH-ID: 1.10.490.10 Dehaloperoxidase. Chain: a, b VNG6478h cluster16 -> 1c9bA2 8.7874233 106 / 92 conP: 0.352 CATH-ID: 1.10.472.10 General transcription factor iib. Chain: a, e, i, m, q. Fragment: c-te --end-- VNG6479h one-of-top-five-correct: 0.507802873991306 CThresh: 3.603380 75 best_is: cluster00 VNG6479h cluster00 -> 1cf7B0 9.2869832 82 / 76 conP: 0.530 CATH-ID: 1.10.10.10 Transcription factor e2f-4. Chain: a. Fragment: DNA-binding domain. En VNG6479h cluster01 -> 1d2tA 7.8619845 222 / 76 conP: 0.171 NO-CATH VNG6479h cluster02 -> 1d2tA 8.3860576 222 / 76 conP: 0.193 NO-CATH VNG6479h cluster03 -> 1e7aA6 8.0335950 78 / 76 conP: 0.449 CATH-ID: 1.10.246.10 Serum albumin. Chain: a, b. Engineered: yes VNG6479h cluster04 -> 2sas00 7.2512708 185 / 76 conP: 0.196 CATH-ID: 1.10.238.10 Sarcoplasmic calcium-binding protein (iso type ii) --end-- VNG6480h one-of-top-five-correct: 0.339438473020146 CThresh: 3.004389 95 best_is: cluster02 VNG6480h cluster00 -> 1e79A3 6.2867313 131 / 51 conP: 0.139 CATH-ID: 1.20.150.20 Atp synthase alpha chain heart isoform. Chain: a, b, c. Synonym: bovin VNG6480h cluster01 -> 1a1w00 5.3602307 83 / 51 conP: 0.193 CATH-ID: 1.10.533.10 Fadd protein. Chain: null. Fragment: death effector domain. Synonym: f VNG6480h cluster02 -> 1aisB2 7.6764822 94 / 51 conP: 0.286 CATH-ID: 1.10.472.10 Tata-binding protein. Chain: a. Fragment: residues 1 - 181. Synonym: t VNG6480h cluster03 -> 1d2zA0 5.4521328 102 / 51 conP: 0.159 CATH-ID: 1.10.533.10 Death domain of pelle. Chain: a, c. Engineered: yes. Death domain of t VNG6480h cluster04 -> 1bpxA1 6.0551062 83 / 51 conP: 0.226 CATH-ID: 1.10.150.110 DNA polymerase beta. Chain: a. Synonym: pol-beta, beta-pol. Engineered --end-- VNG6481h one-of-top-five-correct: 0.486893886609467 CThresh: 4.697682 75 best_is: cluster02 VNG6481h cluster00 -> 1ei9A0 5.1341906 279 / 88 conP: 0.063 CATH-ID: 3.40.50.950 Palmitoyl protein thioesterase 1. Chain: a. Engineered: yes VNG6481h cluster01 -> 1itg00 6.2625403 142 / 88 conP: 0.216 CATH-ID: 3.30.420.10 HIV-1 integrase (catalytic domain comprising residues 50 - 212) mutant VNG6481h cluster02 -> 1d1dA2 9.2810174 80 / 88 conP: 0.518 CATH-ID: 1.10.1200.30 Capsid protein. Chain: a. Engineered: yes. Mutation: yes VNG6481h cluster03 -> 1ctt02 7.3191558 115 / 88 conP: 0.316 CATH-ID: 3.40.140.10 Cytidine deaminase (cda) complexed with 3,4-dihydrozebularine (dhz) VNG6481h cluster04 -> 1eca00 6.0933727 136 / 88 conP: 0.216 CATH-ID: 1.10.490.10 Hemoglobin (erythrocruorin, aquo met) --end-- VNG64830 one-of-top-five-correct: 0.0185785093821413 CThresh: 6.858436 75 best_is: --end-- VNG64860 one-of-top-five-correct: 0.025907475528257 CThresh: 4.805935 75 best_is: --end--