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[+] Show/hide bicluster #165 rows and columns.
bicluster 165
Mycobacterium tuberculosis H37Rv
19x35
[+] Show/hide bicluster #165 rows (genes).
bicluster 165 genes
Mycobacterium tuberculosis H37Rv
19
[+] Show/hide bicluster #165 rows (short gene names).
bicluster 165 short names
Mycobacterium tuberculosis H37Rv
19
short_name
[+] Show/hide bicluster #165 rows (long gene names).
bicluster 165 long names
Mycobacterium tuberculosis H37Rv
19
long_name
[+] Show/hide bicluster #165 rows (NCBI RefSeq gene IDs).
bicluster 165 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #165 gene upstream sequences.
bicluster 165 upstream sequences
Mycobacterium tuberculosis H37Rv
19
upstream
[+] Show/hide bicluster #165 columns (arrays; conditions).
bicluster 165 arrays
Mycobacterium tuberculosis H37Rv
35
[+] Show/hide bicluster #165 ratios.
bicluster 165 ratios
Mycobacterium tuberculosis H37Rv
19x35
GENES Amp Antimycin BZA CCCP Clofazimine Clotrimazole DCCD DNP DTNB DTT Econazole GSNO_CPZ GSNO_KCN GSNO_menadione KCN menadione Min_med__succinate_ Mtm NaN3 NRP_1 Oflox PA824 Palmitate pH4_8 pH5_2 pH5_6 Procept_6776 Procept_6778 TLM TRZ UV Verapamil X_111895 X_124196 X_59
Rv0073 -0.322038401923449 0.53003845938147 -0.124518026279035 -3.05888864840545 -0.238715125465702 0.461554696859532 -3.72547791235202 -2.47893511151577 0.497177269345555 -1.54676399561425 0.527260118173239 -0.442178951428122 -0.699219737638772 -0.331715787532621 -2.36085050637343 -0.901347117593101 0.355147135719788 0.110160483684163 0 -1.28620824269659 0.572812111456093 -2.05764762357296 0.247658509036583 -0.236686623600297 -0.198635295839855 0.242946062270076 -1.87194625628068 -0.336496580103775 -0.207299883129882 -1.3608133681426 0.0976850736162846 0.554672407698011 -0.0444604630843849 0.754122966619581 0.298092152746125
Rv0227c 0.503825330436719 0.911939840530695 -0.588017479942753 -2.34386388432583 -0.193314904386061 0.747259162993878 -3.17226190439805 -2.12653679055717 0.6809518086377 -0.559383190572713 0.541375585598393 -0.885902114653887 -0.886585370948951 -0.279644744880689 -2.24213732407835 -0.7731422861046 0.185482511085702 0.636418395788951 -0.109570333449298 -0.83551288339999 0.80902018252036 -1.82830240781002 0.522167914025254 -0.841536202834895 -0.101417209577741 0.261356007328408 -1.74843139210713 -0.176585083826766 0.515299784556326 -1.64262707588830 0.568818562397611 0.160082967358785 0.542908827756303 0.623723472078352 0.380394003477714
Rv0361 0.295131966669056 -0.30083888723523 -0.370782871404798 -2.98532066008715 0.0068385885603094 0.510039455296649 -2.28235420857062 -3.20807090263113 0.0584323055072409 -1.15938118326824 0.673613422923517 -0.751050619988393 -1.14305395944692 0.151425468326847 -3.07563627677247 -0.0170966995493697 -0.278669330286276 0.350430980112241 0.107335416260404 -0.906291140499865 0.447707771799026 -1.79808219389684 -0.0248053634712786 0.079792305536435 0.446724995663369 0.571330929434341 -0.709855992491245 -0.479177956826463 0.642605889663821 -1.42813232660205 -0.236869950347518 0 -0.077460237756862 -0.287024576594697 -0.321707298842752
Rv0717 0.568659809207118 0.544299625285735 -1.03813576088687 -2.95425415250464 -0.424057954274053 0.223773935971542 -2.65893189852407 -2.29261389237823 0.281924363315708 -1.29295021254532 -0.0490300350277255 -1.79765801568571 -1.33226259195477 -0.0137225320557649 -2.16432802229718 -0.089292575596151 0.150508649291740 0.536067019464766 -1.34500805950881 -0.442143112384082 0.490219774478884 -2.87607378867167 0.07187154998649 -0.372657543473329 -0.0320468628637312 0.128377912789245 -1.90567313551184 -0.153841999762041 0.258483847644531 -1.85622051243656 0.414704571410336 -0.0181506038226351 -0.107951001257057 0.474695566056051 0.331126975715037
Rv1018c 0.903209952025467 0.302409135139144 -0.228808597124940 -2.10547585158975 -0.792478153915355 0.499493743237438 -1.96431199460136 -2.53066945161713 0.42466753677583 -1.42048630204801 0.529212412542128 -1.24062561424394 -1.63785846977594 0.118910143843813 -1.91406517579699 -0.424078737112733 0.976079728460727 0.880275716810635 -1.20265785551449 -1.43976112020140 -0.017848664932724 -2.0103159450452 0.140724190679749 0.125482544052786 0.249424441220063 0.630915539924384 -2.27190962295229 -1.37625113725637 0.204844866721790 -1.56455380926331 0.590806598524075 0.400499628378505 -0.236814620962155 0.0790695798888634 0.200006146847144
Rv1281c 0.0616945421919837 1.02779116912425 -0.347171833329048 -1.97049243555412 -0.129104634618769 1.43597312801508 -2.00083886835878 -1.50870343126053 0.64918995162239 -0.951194760808656 1.18869546890824 -0.0861770340168484 -0.262916598397228 -0.2893800441815 -1.82926364226522 -0.796847048363513 0.364957419399731 -0.558411244720231 0.277768196191459 -1.52807196200559 -0.267225495779338 -2.82553367532598 0.419364704747696 0 0.757636817702057 0.113987227470533 -3.21205729325625 -0.393840565231197 0.340733541537529 -1.07866009592734 -1.02379559434805 0.489366739268828 0.209351048390297 0.400550075938205 0.59481193423878
Rv1282c 0.272523509180846 0.569504347138904 0.372397598870838 -1.22954305935670 -0.535478359778415 0.71856455023747 -2.92004313483126 -2.34758093993860 0.075312924397182 -1.2891368682541 0.544592072502487 -0.535042422114517 -1.37127069868423 -0.381291537115137 -2.65671875132098 -0.0380512652911723 -0.0167323856545906 0.594281966360176 -0.350051472434497 -0.783110579161293 -0.178962426545218 -2.32993201100455 0.131604828316112 0.350829413287586 0.308525795602285 0.417175299202828 -1.40005516390034 -0.0933515804251423 0 -1.18807352964819 0.872733898957024 0.319417076313188 -0.270763717386346 0.158461036312234 0.4611399675138
Rv2441c 0.354372875719331 0.256799549241907 -0.9608275766194 -3.31708823267748 -0.628214827082041 0.227455786656406 -2.73454795307567 -2.87622930647317 0.224108987382312 -0.85324265207095 0.0226145861142147 -0.665306103119777 -0.928816759406398 0.320833846797269 -2.52590996662838 0.313085476457611 0.20980130942141 0.458678910924679 -0.798433209198054 -0.316091088161003 0.346876892916003 -2.64653060843747 -0.079915186636332 -0.041581096892007 -0.162635803466287 -0.102889561830037 -1.78452016244428 -0.60665393363673 0.130498596426714 -1.09924616126912 0.518920189887976 0.198445340457503 -0.12221143087417 0.379910959788723 0.0463447937113705
Rv2442c 0.307208545860207 0.119716063110125 -0.48509670586544 -2.8245782876453 -0.592202121457521 0.094445582584891 -2.76240176752103 -2.92673048357461 0.175948216851241 -0.71810144085012 0.0189074770655579 -0.665408550026619 -1.45405172342678 0.348533362639816 -2.76305920656727 0.405804154621361 0.324070718919757 0.293220295720494 -0.94065370638855 -0.288380116448177 -0.0993677355536624 -2.48370860645648 -0.141566872393309 0.173909553119333 0.171897809617991 -0.0643836230745801 -1.17786440348959 -0.367303109106206 -0.0963685595631135 -0.80511002767822 -0.0140356558489457 0.274801588594533 0.0326782931884287 0.348631390374836 0.0579398854080301
Rv2523c 0.3498782576926 0.912537604258182 -0.323445123731093 -3.00979318554289 -1.28424593297572 0.153883808605736 -1.92693301884972 -3.08892088401937 0.206604365009061 -1.11681437534185 0.436514808345767 -0.247090051795505 -0.561090599482627 -0.609646423225645 -2.86317539464662 0 0.0538379614584429 0.24134280493258 0.257396890105277 0.059749170617914 0.0948833522843905 -2.03992105822345 0.470666539538487 -0.335473781248208 -0.23800571632362 -0.00119461519017637 -2.20272330246845 0.0622983403105308 0.0559961609858679 -2.65890384452264 0.360307393369643 -0.182340744159742 -0.52528012062397 0.407908926399782 0.546800313465525
Rv2564 0.696105986327472 0.717608849604017 -0.0777596080323337 -2.47678282751758 -1.24298779948990 0.418261285821916 -2.91863960102792 -3.08328709769816 0.359114181068374 -1.60080370434217 -0.0556469602731174 -0.876355037904514 -1.88970226436451 -0.325695851706128 -3.09769984356276 -0.403500834694978 0.595749286791785 0.544224759396783 -0.839352962522863 -0.71356289389267 0.543549898621286 -2.53339081206751 0.645483627567225 -0.47187495423134 0.0141941068437762 0.304371675866149 -1.34281104352441 0.175577885504887 0.276287041623647 -1.95222410920289 0.354098025072467 -0.0272590419125514 -0.268986816279619 0.0852590632571913 0.333986237473474
Rv2929 0.844055900630921 0.480177246474835 -0.542405860801829 -1.78766629519713 -0.249179210925840 0.423356909219175 -1.91836402544576 -1.66866292901014 0.416063741948868 -1.78901579595465 0.497489224596287 -1.14319702569608 -1.29372508482126 -0.97208356474311 -2.0529110443972 -0.260358269303507 -0.131531003467062 0.870401961478781 -0.476620606000846 -1.07531512242234 0.726127497914862 -1.85258612849819 0.348377336511893 -0.175250727454031 -0.224087288661157 0.198883313435065 -1.35409526302007 0.141283061837594 0.656246052392915 -2.02934387955179 1.11955214982352 -0.290616960719546 -0.282155681841740 0.64968294001323 0.280724485921584
Rv3218 0.382034108550593 1.38898783681891 -0.701136336301457 -1.90597783469509 -1.67159924207898 -0.137989979998888 -1.65104796706279 -1.87682992918722 0.64485915849576 -2.09325755012398 0.331239609500403 -0.595266702397494 -1.68210346362568 -0.261291771932817 -2.61492039070806 -0.452274355471242 -0.216150691534515 0.552312738059502 -0.495572081475626 -0.0834883165518728 -0.238485772168309 -2.93705624192368 -0.128006269400249 0.275574691567562 0.26873574477021 0.647441398692496 -1.88539622497905 -0.306617585913447 0.384973003789684 -1.72084420335657 0.440881403958316 -0.0435977190324107 -0.222571781226917 0.233184737098991 0.419628808286411
Rv3461c 0.507773395664182 -0.0242296597591224 -0.0367705172984538 -2.99773971514839 0.117852351208219 0.151763091627929 -1.81643515704264 -2.52267660284081 0.110476206144971 -0.257355663557501 0.0727675646626212 -0.092786009138602 -0.894559870546582 0.472542370173965 -2.23432944131918 0.69097278296413 0 0.247290132440124 -0.326848540746531 -0.607702140203462 0.32712634783126 -3.11212732431895 -0.195164329392591 0.334709895063784 -0.109903669395491 -0.100606969619117 -1.04566532172203 -0.398358348373712 -0.359373324645259 -1.43327544480933 -0.0445340045076763 -0.0106750020492096 0.288258265480844 0.572820052798112 -0.0122797529322994
Rv3494c 0.385449917726919 0.238774789359387 0.458205503072452 -2.14990523368358 -0.507455421255737 0.301405617734458 -1.8384310065168 -2.15472225566370 0.25303384010155 -1.21976478390668 0.4874552844366 -0.294813979483794 -1.34444902510999 -0.508192006915003 -1.90061618076642 -0.0942297665865272 0.748336222658288 0.662548780322955 -0.114979645911968 -1.92043727351903 0.330559103278924 -1.80881449160838 0.058410922239959 0.763813527491303 1.20548590744818 1.01154103270329 -2.07943669907881 -0.768633119337703 0.186816732591367 -2.31496354287049 0.399583985657896 0.14363376821123 -0.146026091817446 0.0875356942621567 -0.0204673363368145
Rv3579c 0.348111389860626 0.455142428600365 0 -3.0345534189005 -0.78381377167014 -0.0230581142791603 -2.36620622254036 -2.62964080688415 -0.188841415926628 -0.444732458157856 -0.363413950183124 0.0848399527966482 -1.71533736455473 -0.123501014773086 -3.3168514064275 -0.162217289212884 -0.191051607234150 0.540344448905903 -0.151827028626261 -1.33550985878456 0.934507331301862 -2.80749524374218 -0.58223923332918 0.0784109454869582 0.0785874068149133 0.188566485167033 -1.28546335446863 0.206232788654229 0.466290271302069 0.00654479458565178 0.405460072398511 -0.501171122311138 0.323851957640929 0.361746104436666 0.141999651592207
Rv3791 0.802991942629994 0.580537789020596 -0.119752243273352 -3.00237576501539 -0.844368632833417 0.50331429295019 -2.2356284959365 -2.51476148533167 0.625416673859754 -1.60198404144429 0.421797709810461 -0.600113653435396 -1.74728156042944 -0.738863444223354 -2.84009702617104 -0.770094422104887 -0.013257565723893 0.425305189769919 -0.396977149096631 -0.575542273323857 0.948112290046822 -2.56056376104783 0.967471044148487 -0.462222472123979 -0.396368846621982 0.524566873789831 -2.28573408036065 -0.229524776344655 0.322211784953711 -1.29437447953871 0.209612932024843 0.165934394628618 -0.275273260351798 0.276065178801188 0
Rv3820c 0.219315846847659 0.545506075391947 -0.262007683301752 -2.67178039161915 -1.25033108434703 -0.0121895025858015 -2.89184934261848 -2.76924628700432 0.512503405491097 -1.65392367663640 -0.237399469721572 0.0212645230224395 -1.61196928596190 0.62539808417987 -3.09607558097169 0.12836261977387 0.750455420595971 0.632383373922593 -1.04613127662159 0.094958698021687 0.368130043264268 -2.48323785437042 0.188868189174884 -0.376858140407332 0.0954063820874449 0.170487154299098 -1.95262769003547 -0.990072134089206 -0.142252879135758 -1.74310648168206 0.352884483117646 0.405511896959055 0.000202724732189127 -0.0543663204752323 0.157996755432996
Rv3924c 0.57897677908294 0.270792017782308 -0.769774511444145 -2.6862338997256 -0.308156826779985 -0.0216775832877958 -2.62432274381670 -2.49065716346974 0.101368350213864 -1.19697537562971 -0.246953786187778 -0.675331824959443 -1.80288455379190 0.0501547622900825 -2.50704352099785 0.261179945515327 0.284380955068251 0.777066645414893 -0.83911170429014 -0.00927591434833249 0.493225100694272 -2.4344572403291 -0.482651128761388 -0.154496781908603 -0.0228800693619922 0 -1.91440535202052 -0.413338891457452 0.0414471809741647 -1.09669007503972 0.547347333718287 0.086612487311222 -0.000229958728863576 0.09269688500376 0.469855363408292
[+] Show/hide bicluster #165 motif PSSM #1. bicluster 165 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.75 0.25 0
2 0.75 0 0.25 0
3 0.25 0.125 0.25 0.375
4 0 1 0 0
5 0.375 0 0.625 0
6 0.125 0.375 0 0.5
7 0 1 0 0
8 0.125 0 0.875 0
9 0.125 0.25 0 0.625
10 0 1 0 0
11 0.375 0.125 0.5 0
12 0 0.375 0.5 0.125
13 0.125 0.25 0.5 0.125
14 0.125 0.125 0.75 0
15 0 0.625 0.25 0.125
16 0.875 0 0.125 0
17 0.375 0.125 0.5 0
18 0.125 0 0 0.875
19 0 0.375 0 0.625
20 0.625 0.25 0 0.125
21 0.5 0.375 0 0.125
22 0 0.625 0 0.375
23 0 0 0.875 0.125
24 0 0.375 0 0.625 [+] Show/hide bicluster #165 motif PSSM #2. bicluster 165 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0 1 0 0
2 1 0 0 0
3 0.333333 0.444444 0.111111 0.111111
4 0 1 0 0
5 0 0 0.888889 0.111111
6 1 0 0 0
7 0.222222 0.777778 0 0
8 0.888889 0 0 0.111111
9 0.777778 0.222222 0 0
10 0 0.777778 0.111111 0.111111 |